Speciated

Value Members

1. final def !=(arg0: Any): Boolean

   

   Definition Classes

   AnyRef → Any

2. final def ##(): Int

   

   Definition Classes

   AnyRef → Any

3. final def ==(arg0: Any): Boolean

   

   Definition Classes

   AnyRef → Any

4. val Human: String

   

   Default value for human species string.

5. val HumanLabels: SpeciesNameSet

   

   A set of label strings for humans, found in KBs.

6. val HumanNsId: String

   

   Default value for human species namespace:ID string (NCBI Taxonomy).

7. def SpeciesNameSet(xs: String*): Set[String]

   

   Convenience function to create a species name set from string arguments.

   Convenience function to create a species name set from string arguments.

   Definition Classes

   Speciated

8. final def asInstanceOf[T0]: T0

   

   Definition Classes

   Any

9. def clone(): AnyRef

   

   Attributes

   protected[java.lang]

   Definition Classes

   AnyRef

   Annotations

   @throws( ... )

10. def containsHumanNsId(nsIdSeq: Seq[String]): Boolean

    

    Tell whether the given sequence of namespace/ID strings contains a human nsId.

    Tell whether the given sequence of namespace/ID strings contains a human nsId.

    Definition Classes

    Speciated

11. def containsHumanSpecies(speciesSeq: Seq[String]): Boolean

    

    Tell whether the given sequence of species strings contain a human species label.

    Tell whether the given sequence of species strings contain a human species label.

    Definition Classes

    Speciated

12. final def eq(arg0: AnyRef): Boolean

    

    Definition Classes

    AnyRef

13. def equals(arg0: Any): Boolean

    

    Definition Classes

    AnyRef → Any

14. def finalize(): Unit

    

    Attributes

    protected[java.lang]

    Definition Classes

    AnyRef

    Annotations

    @throws( classOf[java.lang.Throwable] )

15. final def getClass(): Class[_]

    

    Definition Classes

    AnyRef → Any

16. def hasHumanNsId(nsId: String): Boolean

    

    Tell whether the given namespace/ID string is an ID for humans or not.

    Tell whether the given namespace/ID string is an ID for humans or not.

    Definition Classes

    Speciated

17. def hashCode(): Int

    

    Definition Classes

    AnyRef → Any

18. def isHumanSpecies(species: String): Boolean

    

    Tell whether the given species string is label for humans or not.

    Tell whether the given species string is label for humans or not.

    Definition Classes

    Speciated

19. final def isInstanceOf[T0]: Boolean

    

    Definition Classes

    Any

20. def isMemberOf(species: String, speciesSet: SpeciesNameSet): Boolean

    

    Tell whether the given species string is a member of the given set of species.

    Tell whether the given species string is a member of the given set of species.

    Definition Classes

    Speciated

21. final def ne(arg0: AnyRef): Boolean

    

    Definition Classes

    AnyRef

22. final def notify(): Unit

    

    Definition Classes

    AnyRef

23. final def notifyAll(): Unit

    

    Definition Classes

    AnyRef

24. final def synchronized[T0](arg0: ⇒ T0): T0

    

    Definition Classes

    AnyRef

25. def toString(): String

    

    Definition Classes

    AnyRef → Any

26. final def wait(): Unit

    

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

27. final def wait(arg0: Long, arg1: Int): Unit

    

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )

28. final def wait(arg0: Long): Unit

    

    Definition Classes

    AnyRef

    Annotations

    @throws( ... )