KBLookupSet

Value Members

1. final def !=(arg0: Any): Boolean

   

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2. final def ##(): Int

   

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3. final def ==(arg0: Any): Boolean

   

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4. val GeneNamePrefixes: KBLookupSet

   

   Set of gene name prefix strings extracted from the affixes of the Sorger bioentities file.

5. val ProteinDomainShortNames: KBLookupSet

   

   Set of short protein domain strings.

6. val ProteinKinaseIds: KBLookupSet

   

   Set of protein kinase names.

7. def apply(filename: String, keyTransforms: KeyTransforms = DefaultKeyTransforms): KBLookupSet

   

   Create and return a KBLookupSet by reading and transforming lines from the given file.

8. final def asInstanceOf[T0]: T0

   

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9. def clone(): AnyRef

   

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10. final def eq(arg0: AnyRef): Boolean

    

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11. def equals(arg0: Any): Boolean

    

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12. def finalize(): Unit

    

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13. final def getClass(): Class[_]

    

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14. def hashCode(): Int

    

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15. def isGeneNamePrefix(prefix: String): Boolean

    

    Tell whether the given string names a gene name prefix or not.

16. final def isInstanceOf[T0]: Boolean

    

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17. def isProteinDomain(domain: String): Boolean

    

    Tell whether the given string names a protein domain or not.

18. def isProteinKinase(id: String): Boolean

    

    Tell whether the given ID string names a protein kinase or not.

19. final def ne(arg0: AnyRef): Boolean

    

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20. final def notify(): Unit

    

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21. final def notifyAll(): Unit

    

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22. final def synchronized[T0](arg0: ⇒ T0): T0

    

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23. def toString(): String

    

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24. final def wait(): Unit

    

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25. final def wait(arg0: Long, arg1: Int): Unit

    

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26. final def wait(arg0: Long): Unit

    

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