Object

org.clulab.reach.grounding

ReachIMKBLookups

Related Doc: package grounding

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object ReachIMKBLookups

Object which implements all Reach KB Lookup instances. Written by: Tom Hicks. 10/23/2015. Last Modified: Revert to using default (canonical) key transforms.

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  1. final def !=(arg0: Any): Boolean

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  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. val TsvIMKBFactory: TsvIMKBFactory

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    Single factory instance to generate Tsv IMKB classes.

  5. final def asInstanceOf[T0]: T0

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  6. def clone(): AnyRef

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  7. final def eq(arg0: AnyRef): Boolean

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  8. def equals(arg0: Any): Boolean

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  9. def finalize(): Unit

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  10. final def getClass(): Class[_]

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  11. def hashCode(): Int

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  12. final def isInstanceOf[T0]: Boolean

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  13. final def ne(arg0: AnyRef): Boolean

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  14. final def notify(): Unit

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  15. final def notifyAll(): Unit

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  16. def staticCellLocation2KBLookup: IMKBLookup

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    KB lookup to resolve subcellular location names via static KB.

  17. def staticCellLocationKBLookup: IMKBLookup

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    KB lookup to resolve subcellular location names via static KB.

  18. def staticChemicalKBLookup: IMKBLookup

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    KB lookup to resolve small molecule (chemical) names via static KB.

  19. def staticChemicalKBLookupChebi: IMKBLookup

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    KB lookup to resolve small molecule (chemical) names via static KB.

  20. def staticDiseaseKBLookup: IMKBLookup

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    KB lookup to resolve disease names via static KB.

  21. def staticDrugKBLookup: IMKBLookup

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    KB lookup to resolve small molecule (drug) names via static KB.

  22. def staticFamilyOrComplexKBLookup: IMKBLookup

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    KB accessor to resolve protein family and complex names via static KBs with alternate lookups.

  23. def staticGeneKBLookup: IMKBLookup

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    KB accessor to resolve human gene names via static KB.

  24. def staticMetaboliteKBLookup: IMKBLookup

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    KB lookup to resolve small molecule (metabolite) names via static KB.

  25. def staticProteinFamily2KBLookup: IMKBLookup

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    KB lookup to resolve protein family names via static KBs with alternate lookups.

  26. def staticProteinFamilyKBLookup: IMKBLookup

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    KB lookup to resolve protein family names via static KBs with alternate lookups.

  27. def staticProteinKBLookup: IMKBLookup

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    KB accessor to resolve protein names via static KB.

  28. final def synchronized[T0](arg0: ⇒ T0): T0

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  29. def toString(): String

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  30. final def wait(): Unit

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  31. final def wait(arg0: Long, arg1: Int): Unit

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  32. final def wait(arg0: Long): Unit

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