Index (dishevelled.org compress 1.6.5 API)

B C G I O R S W X Z
All Classes and Interfaces|All Packages

B

bgzfFileCharSink(File) - Static method in class org.dishevelled.compress.Sinks: Create and return a new block compressed gzip (BGZF) char sink for the specified file.
bgzfFileCharSource(File) - Static method in class org.dishevelled.compress.Sources: Create and return a new block compressed gzip (BGZF) char source for the specified file.
bgzfFileReader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified block compressed gzip (BGZF) compressed file.
bgzfInputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new block compressed gzip (BGZF) char source for the specified input stream.
bgzfInputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified block compressed gzip (BGZF) compressed input stream.
bgzfOutputStreamCharSink(OutputStream) - Static method in class org.dishevelled.compress.Sinks: Create and return a new block compressed gzip (BGZF) char sink for the specified output stream.
bgzfOutputStreamWriter(OutputStream) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with bgzf compression for the specified output stream.
BgzfUtils - Class in org.dishevelled.compress: Utility code for the block compressed gzip (BGZF) compression format.
bzip2FileCharSink(File, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new bzip2 compressed char sink for the specified file.
bzip2FileCharSource(File) - Static method in class org.dishevelled.compress.Sources: Create and return a new bzip2 compressed char source for the specified file.
bzip2FileReader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified bzip2 compressed file.
bzip2InputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new bzip2 compressed char source for the specified input stream.
bzip2InputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified bzip2 compressed input stream.
bzip2OutputStreamCharSink(OutputStream) - Static method in class org.dishevelled.compress.Sinks: Create and return a new bzip2 compressed char sink for the specified output stream.
bzip2OutputStreamWriter(OutputStream) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with bzip2 compression for the specified output stream.

C

charSink(File) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdout if the file is null.
charSink(File, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdout if the file is null.
charSink(File, Charset, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdout if the file is null or -.
charSink(String) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdout if the path name is null or -.
charSink(String, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdout if the path name is null or -.
charSink(String, Charset, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdout if the path name is null or -.
charSink(Path) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdout if the path is null or -.
charSink(Path, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdout if the path is null or -.
charSink(Path, Charset, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdout if the path is null or -.
charSource(File) - Static method in class org.dishevelled.compress.Sources: Create and return a new char source with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdin if the file is null or -.
charSource(File, Charset) - Static method in class org.dishevelled.compress.Sources: Create and return a new char source with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdin if the file is null or -.
charSource(String, OpenOption...) - Static method in class org.dishevelled.compress.Sources: Create and return a new char source with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdin if the path name is null or -.
charSource(Path, OpenOption...) - Static method in class org.dishevelled.compress.Sources: Create and return a new char source with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdin if the path is null or -.
Compress - Class in org.dishevelled.compress: Compression utility methods.
compressedFileReader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified compressed file, autodetecting the compression type from the first few bytes of the file.
compressedInputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new char source for the specified compressed input stream, autodetecting the compression type from the first few bytes of the stream.
compressedInputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified compressed input stream, autodetecting the compression type from the first few bytes of the stream.

G

getCompressedFilename(String) - Static method in class org.dishevelled.compress.BgzfUtils: Maps the given filename to the name that the file should have after compression with block compressed gzip (BGZF).
getCompressedFilename(String) - Static method in class org.dishevelled.compress.ZstdUtils: Maps the given filename to the name that the file should have after compression with Zstandard (zstd).
getUncompressedFilename(String) - Static method in class org.dishevelled.compress.BgzfUtils: Maps the given name of a block compressed gzip (BGZF) file to the name that the file should have after uncompression.
getUncompressedFilename(String) - Static method in class org.dishevelled.compress.ZstdUtils: Maps the given name of a Zstandard (zstd) file to the name that the file should have after uncompression.
gzipFileCharSink(File, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new gzip compressed char sink for the specified file.
gzipFileCharSource(File) - Static method in class org.dishevelled.compress.Sources: Create and return a new gzip compressed char source for the specified file.
gzipFileReader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified gzip compressed file.
gzipInputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new gzip compressed char source for the specified input stream.
gzipInputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified gzip compressed input stream.
gzipOutputStreamCharSink(OutputStream) - Static method in class org.dishevelled.compress.Sinks: Create and return a new gzip compressed char sink for the specified output stream.
gzipOutputStreamWriter(OutputStream) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with gzip compression for the specified output stream.

I

inputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new char source for the specified input stream.
inputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified input stream.
isBgzfFile(File) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a block compressed gzip (BGZF) file.
isBgzfFilename(String) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a block compressed gzip (BGZF) file name.
isBgzfInputStream(InputStream) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a block compressed gzip (BGZF) input stream.
isBzip2File(File) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a bzip2 file.
isBzip2Filename(String) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a bzip2 file name.
isBzip2InputStream(InputStream) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a bzip2 input stream.
isCompressedFilename(String) - Static method in class org.dishevelled.compress.BgzfUtils: Detects common block compressed gzip (BGZF) suffixes in the given filename.
isCompressedFilename(String) - Static method in class org.dishevelled.compress.ZstdUtils: Detects common Zstandard (zst) suffixes in the given filename.
isGzipFile(File) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a gzip file.
isGzipFilename(String) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a gzip file name.
isGzipInputStream(InputStream) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a gzip input stream.
isXzFile(File) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is an XZ file.
isXzFilename(String) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is an XZ file name.
isXzInputStream(InputStream) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is an XZ input stream.
isZstdFile(File) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a Zstandard (zstd) file.
isZstdFilename(String) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a Zstandard (zstd) file name.
isZstdInputStream(InputStream) - Static method in class org.dishevelled.compress.Compress: Return true if the specified file is a Zstandard (zstd) input stream.

O

org.dishevelled.compress - package org.dishevelled.compress: Compression utility classes.
outputStreamCharSink(OutputStream) - Static method in class org.dishevelled.compress.Sinks: Create and return a new char sink for the specified output stream.

R

reader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdin if the file is null or -.
reader(String, OpenOption...) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdin if the path name is null or -.
reader(Path, OpenOption...) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdin if the path is null or -.
Readers - Class in org.dishevelled.compress: File, path, and input stream readers with support for bgzf, gzip, bzip2, xz, and zstd compression.

S

Sinks - Class in org.dishevelled.compress: File, path, and output stream sinks with support for bgzf, gzip, bzip2, xz, and zstd compression.
Sources - Class in org.dishevelled.compress: File, path, and input stream sources with support for bgzf, gzip, bzip2, xz, and zstd compression.

W

writer(File) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdout if the file is null or -.
writer(File, boolean) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified file or stdout if the file is null or -.
writer(String) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdout if the path name is null or -.
writer(String, boolean) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path name or stdout if the path name is null or -.
writer(Path) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdout if the path is null or -.
writer(Path, boolean) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with support for bgzf, gzip, bzip2, xz, or zstd compression for the specified path or stdout if the path is null or -.
Writers - Class in org.dishevelled.compress: File, path, and output stream writers with support for bgzf, gzip, bzip2, xz, or zstd compression.

X

xzFileCharSink(File, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new XZ compressed char sink for the specified file.
xzFileCharSource(File) - Static method in class org.dishevelled.compress.Sources: Create and return a new XZ compressed char source for the specified file.
xzFileReader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified XZ compressed file.
xzInputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new XZ compressed char source for the specified input stream.
xzInputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified XZ compressed input stream.
xzOutputStreamCharSink(OutputStream) - Static method in class org.dishevelled.compress.Sinks: Create and return a new XZ compressed char sink for the specified output stream.
xzOutputStreamWriter(OutputStream) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with XZ compression for the specified output stream.

Z

zstdFileCharSink(File, boolean) - Static method in class org.dishevelled.compress.Sinks: Create and return a new Zstandard (zstd) compressed char sink for the specified file.
zstdFileCharSource(File) - Static method in class org.dishevelled.compress.Sources: Create and return a new Zstandard (zstd) compressed char source for the specified file.
zstdFileReader(File) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified Zstandard (zstd) compressed file.
zstdInputStreamCharSource(InputStream) - Static method in class org.dishevelled.compress.Sources: Create and return a new Zstandard (zstd) compressed char source for the specified input stream.
zstdInputStreamReader(InputStream) - Static method in class org.dishevelled.compress.Readers: Create and return a new buffered reader for the specified Zstandard (zstd) compressed input stream.
zstdOutputStreamCharSink(OutputStream) - Static method in class org.dishevelled.compress.Sinks: Create and return a new Zstandard (zstd) compressed char sink for the specified output stream.
zstdOutputStreamWriter(OutputStream) - Static method in class org.dishevelled.compress.Writers: Create and return a new buffered print writer with Zstandard (zstd) compression for the specified output stream.
ZstdUtils - Class in org.dishevelled.compress: Utility code for the Zstandard (zstd) compression format.

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