org.bdgenomics.adam.projections

VariantAnnotationField

object VariantAnnotationField extends FieldEnumeration

Enumeration of VariantAnnotation field names for predicates and projections.

Linear Supertypes
FieldEnumeration, Enumeration, Serializable, Serializable, AnyRef, Any
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Inherited
  1. VariantAnnotationField
  2. FieldEnumeration
  3. Enumeration
  4. Serializable
  5. Serializable
  6. AnyRef
  7. Any
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Type Members

  1. class SchemaVal extends Val with FieldValue

    An enumerated field that is part of this schema.

  2. class Val extends Value with Serializable

    Attributes
    protected
    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID( -3501153230598116017L )

  3. abstract class Value extends Ordered[Value] with Serializable

    Definition Classes
    Enumeration
    Annotations
    @SerialVersionUID( 7091335633555234129L )

  4. class ValueSet extends AbstractSet[Value] with SortedSet[Value] with SortedSetLike[Value, ValueSet] with Serializable

    Definition Classes
    Enumeration

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any

  3. final def ##(): Int

    Definition Classes
    AnyRef → Any

  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any

  6. final def SchemaValue: SchemaVal

    Attributes
    protected
    Definition Classes
    FieldEnumeration

  7. final def Value(i: Int, name: String): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  8. final def Value(name: String): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  9. final def Value(i: Int): Value

    Attributes
    protected
    Definition Classes
    Enumeration

  10. final def Value: Value

    Attributes
    protected
    Definition Classes
    Enumeration

  11. val alleleCount: SchemaVal

  12. val alleleFrequency: SchemaVal

  13. val ancestralAllele: SchemaVal

  14. final def apply(x: Int): Value

    Definition Classes
    Enumeration

  15. final def asInstanceOf[T0]: T0

    Definition Classes
    Any

  16. val attributes: SchemaVal

  17. val cigar: SchemaVal

  18. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  19. val dbSnp: SchemaVal

  20. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  21. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any

  22. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  23. val forwardReadDepth: SchemaVal

  24. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any

  25. val hapMap2: SchemaVal

  26. val hapMap3: SchemaVal

  27. def hashCode(): Int

    Definition Classes
    AnyRef → Any

  28. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any

  29. final def maxId: Int

    Definition Classes
    Enumeration

  30. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef

  31. var nextId: Int

    Attributes
    protected
    Definition Classes
    Enumeration

  32. var nextName: Iterator[String]

    Attributes
    protected
    Definition Classes
    Enumeration

  33. final def notify(): Unit

    Definition Classes
    AnyRef

  34. final def notifyAll(): Unit

    Definition Classes
    AnyRef

  35. val readDepth: SchemaVal

  36. def readResolve(): AnyRef

    Attributes
    protected
    Definition Classes
    Enumeration

  37. val recordSchema: Schema

    Definition Classes
    FieldEnumeration

  38. val reverseReadDepth: SchemaVal

  39. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef

  40. val thousandGenomes: SchemaVal

  41. def toString(): String

    Definition Classes
    Enumeration → AnyRef → Any

  42. val transcriptEffects: SchemaVal

  43. val validated: SchemaVal

  44. def values: ValueSet

    Definition Classes
    Enumeration

  45. val variant: SchemaVal

  46. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  47. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  48. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  49. final def withName(s: String): Value

    Definition Classes
    Enumeration

Inherited from FieldEnumeration

Inherited from Enumeration

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

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