RecordGroupDictionary

Value Members

1. final def !=(arg0: Any): Boolean

   

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2. final def ##(): Int

   

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3. final def ==(arg0: Any): Boolean

   

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4. final def asInstanceOf[T0]: T0

   

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5. def clone(): AnyRef

   

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6. def empty: RecordGroupDictionary

   

7. final def eq(arg0: AnyRef): Boolean

   

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8. def equals(arg0: Any): Boolean

   

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9. def finalize(): Unit

   

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10. def fromSAMHeader(header: SAMFileHeader): RecordGroupDictionary

    

    Builds a record group dictionary from a SAM file header.

    Builds a record group dictionary from a SAM file header.

    header

    SAM file header with attached read groups.

    returns

    Returns a new record group dictionary with the read groups attached to the file header.

11. def fromSAMReader(samReader: SAMFileReader): RecordGroupDictionary

    

    Builds a record group dictionary from a SAM file reader by collecting the header, and the read groups attached to the header.

    Builds a record group dictionary from a SAM file reader by collecting the header, and the read groups attached to the header.

    samReader

    SAM file header with attached read groups.

    returns

    Returns a new record group dictionary with the read groups attached to the file header.

12. final def getClass(): Class[_]

    

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13. def hashCode(): Int

    

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14. final def isInstanceOf[T0]: Boolean

    

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15. final def ne(arg0: AnyRef): Boolean

    

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16. final def notify(): Unit

    

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17. final def notifyAll(): Unit

    

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18. final def synchronized[T0](arg0: ⇒ T0): T0

    

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19. def toString(): String

    

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20. final def wait(): Unit

    

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21. final def wait(arg0: Long, arg1: Int): Unit

    

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22. final def wait(arg0: Long): Unit

    

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