Package

org.bdgenomics.adam.rdd

contig

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package contig

Visibility
  1. Public
  2. All

Type Members

  1. case class NucleotideContigFragmentRDD(rdd: RDD[NucleotideContigFragment], sequences: SequenceDictionary) extends AvroGenomicRDD[NucleotideContigFragment, NucleotideContigFragmentRDD] with ReferenceFile with Product with Serializable

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    A wrapper class for RDD[NucleotideContigFragment].

    A wrapper class for RDD[NucleotideContigFragment]. NucleotideContigFragmentRDD extends ReferenceFile. To specifically access a ReferenceFile within an RDD, refer to:

    rdd

    Underlying RDD

    sequences

    Sequence dictionary computed from rdd

    See also

    ReferenceContigMap

Value Members

  1. object NucleotideContigFragmentRDD extends Serializable

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