org.bdgenomics.adam.rich

RichVariant

object RichVariant extends Serializable

Helper object for creating enriched variants.

Linear Supertypes
Serializable, Serializable, AnyRef, Any
Ordering
  1. Alphabetic
  2. By inheritance
Inherited
  1. RichVariant
  2. Serializable
  3. Serializable
  4. AnyRef
  5. Any
  1. Hide All
  2. Show all
Learn more about member selection
Visibility
  1. Public
  2. All

Value Members

  1. final def !=(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  2. final def !=(arg0: Any): Boolean

    Definition Classes
    Any
  3. final def ##(): Int

    Definition Classes
    AnyRef → Any
  4. final def ==(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  5. final def ==(arg0: Any): Boolean

    Definition Classes
    Any
  6. final def asInstanceOf[T0]: T0

    Definition Classes
    Any
  7. def clone(): AnyRef

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  8. final def eq(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  9. def equals(arg0: Any): Boolean

    Definition Classes
    AnyRef → Any
  10. def finalize(): Unit

    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  11. def genotypeToRichVariant(genotype: Genotype): RichVariant

    Builds a rich variant from a genotype.

    Builds a rich variant from a genotype.

    genotype

    Genotype to extract variant from.

    returns

    Returns a rich variant representing the variant that was genotyped.

  12. final def getClass(): Class[_]

    Definition Classes
    AnyRef → Any
  13. def hashCode(): Int

    Definition Classes
    AnyRef → Any
  14. final def isInstanceOf[T0]: Boolean

    Definition Classes
    Any
  15. final def ne(arg0: AnyRef): Boolean

    Definition Classes
    AnyRef
  16. final def notify(): Unit

    Definition Classes
    AnyRef
  17. final def notifyAll(): Unit

    Definition Classes
    AnyRef
  18. final def synchronized[T0](arg0: ⇒ T0): T0

    Definition Classes
    AnyRef
  19. def toString(): String

    Definition Classes
    AnyRef → Any
  20. final def wait(): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  21. final def wait(arg0: Long, arg1: Int): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  22. final def wait(arg0: Long): Unit

    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

Inherited from Serializable

Inherited from Serializable

Inherited from AnyRef

Inherited from Any

Ungrouped