Container for flags related to inconsistencies in BAM-record-candidates' cigar-related fields.
Bag of fields with information related to various inconsistencies in BAM-record-candidates.
Information about BAM-record checks at a org.hammerlab.bgzf.Pos.
Serialize a Flags as a BitSet to save IO.
Container for flags related to inconsistencies in BAM-record-candidates' read-name-length and read-name fields.
Container for flags related to inconsistencies in BAM-records' "reference-sequence-index", "reference position", and analogous "mate-" fields.
Bag of fields with information related to various inconsistencies in BAM-record-candidates.
field type: Boolean for individual positions Flags, Long for aggregate Counts.