Object

org.hammerlab.bgzf.index

IndexBlocks

Related Doc: package index

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object IndexBlocks extends Cmd

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Cmd, AnyRef, Any
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  1. IndexBlocks
  2. Cmd
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Type Members

  1. type App = cli.base.app.App[Opts]

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    Definition Classes
    Cmd

  2. type Args = cli.base.app.Args[Opts]

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    Definition Classes
    Cmd

  3. abstract class Main extends AnyRef

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    Definition Classes
    Cmd

  4. type MakeApp = (cli.base.app.Args[Opts]) ⇒ cli.base.app.App[Opts]

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    Definition Classes
    Cmd

  5. type Opts = PrinterArgs

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    CLI app for recording the offsets of all bgzf-block start-positions in a bgzf-compressed file.

    CLI app for recording the offsets of all bgzf-block start-positions in a bgzf-compressed file.

    Format of output file is:

    <position>,<compressed block size>,<uncompressed block size>

    Definition Classes
    IndexBlocks → Cmd
    Annotations
    @AppName( ... ) @ProgName( ... )

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  2. final def ##(): Int

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    AnyRef → Any

  3. final def ==(arg0: Any): Boolean

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    AnyRef → Any

  4. object Main

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    Definition Classes
    Cmd

  5. final def asInstanceOf[T0]: T0

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    Any

  6. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )

  7. implicit val closeable: Closeable

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    Definition Classes
    Cmd

  8. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  9. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any

  10. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )

  11. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any

  12. def hashCode(): Int

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    AnyRef → Any

  13. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any

  14. val main: Main

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    Definition Classes
    IndexBlocks → Cmd

  15. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef

  16. final def notify(): Unit

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    AnyRef

  17. final def notifyAll(): Unit

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  18. final def synchronized[T0](arg0: ⇒ T0): T0

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  19. def toString(): String

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  20. final def wait(): Unit

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    Annotations
    @throws( ... )

  21. final def wait(arg0: Long, arg1: Int): Unit

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    Definition Classes
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    Annotations
    @throws( ... )

  22. final def wait(arg0: Long): Unit

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    Definition Classes
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    Annotations
    @throws( ... )

Inherited from Cmd

Inherited from AnyRef

Inherited from Any

Ungrouped