java.lang.Object

ome.xml.meta.AggregateMetadata

All Implemented Interfaces:: BaseMetadata, IMetadata, MetadataRetrieve, MetadataStore

public class AggregateMetadata
extends java.lang.Object
implements IMetadata

A metadata store which delegates the actual storage to one or more sub metadata stores.

Author:: Chris Allan callan at blackcat.ca, Curtis Rueden ctrueden at wisc.edu

Constructor Summary

Constructors

Constructor Description

AggregateMetadata(java.util.List<BaseMetadata> delegates)
Creates a new instance.

Method Summary

Modifier and Type	Method	Description
`void`	`createRoot()`	Create root node.
`java.lang.String`	`getArcAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Get the AnnotationRef property of Arc.
`java.lang.String`	`getArcID(int instrumentIndex, int lightSourceIndex)`	Get the ID property of Arc.
`java.lang.String`	`getArcLotNumber(int instrumentIndex, int lightSourceIndex)`	Get the LotNumber property of Arc.
`java.lang.String`	`getArcManufacturer(int instrumentIndex, int lightSourceIndex)`	Get the Manufacturer property of Arc.
`java.lang.String`	`getArcModel(int instrumentIndex, int lightSourceIndex)`	Get the Model property of Arc.
`Power`	`getArcPower(int instrumentIndex, int lightSourceIndex)`	Get the Power property of Arc.
`java.lang.String`	`getArcSerialNumber(int instrumentIndex, int lightSourceIndex)`	Get the SerialNumber property of Arc.
`ArcType`	`getArcType(int instrumentIndex, int lightSourceIndex)`	Get the Type property of Arc.
`byte[]`	`getBinaryFileBinData(int fileAnnotationIndex)`	Get the Base64Binary property of BinData.
`java.lang.Boolean`	`getBinaryFileBinDataBigEndian(int fileAnnotationIndex)`	Get the BigEndian property of BinData.
`Compression`	`getBinaryFileBinDataCompression(int fileAnnotationIndex)`	Get the Compression property of BinData.
`NonNegativeLong`	`getBinaryFileBinDataLength(int fileAnnotationIndex)`	Get the Length property of BinData.
`java.lang.String`	`getBinaryFileFileName(int fileAnnotationIndex)`	Get the FileName property of BinaryFile.
`java.lang.String`	`getBinaryFileMIMEType(int fileAnnotationIndex)`	Get the MIMEType property of BinaryFile.
`NonNegativeLong`	`getBinaryFileSize(int fileAnnotationIndex)`	Get the Size property of BinaryFile.
`java.lang.String`	`getBinaryOnlyMetadataFile()`	Get the MetadataFile property of BinaryOnly.
`java.lang.String`	`getBinaryOnlyUUID()`	Get the UUID property of BinaryOnly.
`int`	`getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)`	Get the number of links to a BooleanAnnotation.
`java.lang.String`	`getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of BooleanAnnotation.
`java.lang.String`	`getBooleanAnnotationAnnotator(int booleanAnnotationIndex)`	Get the Annotator property of BooleanAnnotation.
`int`	`getBooleanAnnotationCount()`	Get the number of BooleanAnnotation elements.
`java.lang.String`	`getBooleanAnnotationDescription(int booleanAnnotationIndex)`	Get the Description property of BooleanAnnotation.
`java.lang.String`	`getBooleanAnnotationID(int booleanAnnotationIndex)`	Get the ID property of BooleanAnnotation.
`java.lang.String`	`getBooleanAnnotationNamespace(int booleanAnnotationIndex)`	Get the Namespace property of BooleanAnnotation.
`java.lang.Boolean`	`getBooleanAnnotationValue(int booleanAnnotationIndex)`	Get the Value property of BooleanAnnotation.
`AcquisitionMode`	`getChannelAcquisitionMode(int imageIndex, int channelIndex)`	Get the AcquisitionMode property of Channel.
`java.lang.String`	`getChannelAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)`	Get the AnnotationRef property of Channel.
`int`	`getChannelAnnotationRefCount(int imageIndex, int channelIndex)`	Get the number of AnnotationRef elements in Channel.
`Color`	`getChannelColor(int imageIndex, int channelIndex)`	Get the Color property of Channel.
`ContrastMethod`	`getChannelContrastMethod(int imageIndex, int channelIndex)`	Get the ContrastMethod property of Channel.
`int`	`getChannelCount(int imageIndex)`	Get the number of Channel elements.
`Length`	`getChannelEmissionWavelength(int imageIndex, int channelIndex)`	Get the EmissionWavelength property of Channel.
`Length`	`getChannelExcitationWavelength(int imageIndex, int channelIndex)`	Get the ExcitationWavelength property of Channel.
`java.lang.String`	`getChannelFilterSetRef(int imageIndex, int channelIndex)`	Get the FilterSetRef property of Channel.
`java.lang.String`	`getChannelFluor(int imageIndex, int channelIndex)`	Get the Fluor property of Channel.
`java.lang.String`	`getChannelID(int imageIndex, int channelIndex)`	Get the ID property of Channel.
`IlluminationType`	`getChannelIlluminationType(int imageIndex, int channelIndex)`	Get the IlluminationType property of Channel.
`PercentFraction`	`getChannelLightSourceSettingsAttenuation(int imageIndex, int channelIndex)`	Get the Attenuation property of LightSourceSettings.
`java.lang.String`	`getChannelLightSourceSettingsID(int imageIndex, int channelIndex)`	Get the ID property of LightSourceSettings.
`Length`	`getChannelLightSourceSettingsWavelength(int imageIndex, int channelIndex)`	Get the Wavelength property of LightSourceSettings.
`java.lang.String`	`getChannelName(int imageIndex, int channelIndex)`	Get the Name property of Channel.
`java.lang.Double`	`getChannelNDFilter(int imageIndex, int channelIndex)`	Get the NDFilter property of Channel.
`Length`	`getChannelPinholeSize(int imageIndex, int channelIndex)`	Get the PinholeSize property of Channel.
`java.lang.Integer`	`getChannelPockelCellSetting(int imageIndex, int channelIndex)`	Get the PockelCellSetting property of Channel.
`PositiveInteger`	`getChannelSamplesPerPixel(int imageIndex, int channelIndex)`	Get the SamplesPerPixel property of Channel.
`int`	`getCommentAnnotationAnnotationCount(int commentAnnotationIndex)`	Get the number of links to a CommentAnnotation.
`java.lang.String`	`getCommentAnnotationAnnotationRef(int commentAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of CommentAnnotation.
`java.lang.String`	`getCommentAnnotationAnnotator(int commentAnnotationIndex)`	Get the Annotator property of CommentAnnotation.
`int`	`getCommentAnnotationCount()`	Get the number of CommentAnnotation elements.
`java.lang.String`	`getCommentAnnotationDescription(int commentAnnotationIndex)`	Get the Description property of CommentAnnotation.
`java.lang.String`	`getCommentAnnotationID(int commentAnnotationIndex)`	Get the ID property of CommentAnnotation.
`java.lang.String`	`getCommentAnnotationNamespace(int commentAnnotationIndex)`	Get the Namespace property of CommentAnnotation.
`java.lang.String`	`getCommentAnnotationValue(int commentAnnotationIndex)`	Get the Value property of CommentAnnotation.
`java.lang.String`	`getCreator()`	Gets the Creator associated with this collection of metadata.
`java.lang.String`	`getDatasetAnnotationRef(int datasetIndex, int annotationRefIndex)`	Get the AnnotationRef property of Dataset.
`int`	`getDatasetAnnotationRefCount(int datasetIndex)`	Get the number of AnnotationRef elements in Dataset.
`int`	`getDatasetCount()`	Get the number of Dataset elements.
`java.lang.String`	`getDatasetDescription(int datasetIndex)`	Get the Description property of Dataset.
`java.lang.String`	`getDatasetExperimenterGroupRef(int datasetIndex)`	Get the ExperimenterGroupRef property of Dataset.
`java.lang.String`	`getDatasetExperimenterRef(int datasetIndex)`	Get the ExperimenterRef property of Dataset.
`java.lang.String`	`getDatasetID(int datasetIndex)`	Get the ID property of Dataset.
`java.lang.String`	`getDatasetImageRef(int datasetIndex, int imageRefIndex)`	Get the ImageRef property of Dataset.
`int`	`getDatasetImageRefCount(int datasetIndex)`	Get the number of ImageRef elements in Dataset.
`java.lang.String`	`getDatasetName(int datasetIndex)`	Get the Name property of Dataset.
`int`	`getDatasetRefCount(int projectIndex)`	Get the number of DatasetRef elements.
`java.lang.Double`	`getDetectorAmplificationGain(int instrumentIndex, int detectorIndex)`	Get the AmplificationGain property of Detector.
`java.lang.String`	`getDetectorAnnotationRef(int instrumentIndex, int detectorIndex, int annotationRefIndex)`	Get the AnnotationRef property of Detector.
`int`	`getDetectorAnnotationRefCount(int instrumentIndex, int detectorIndex)`	Get the number of AnnotationRef elements in Detector.
`int`	`getDetectorCount(int instrumentIndex)`	Get the number of Detector elements.
`java.lang.Double`	`getDetectorGain(int instrumentIndex, int detectorIndex)`	Get the Gain property of Detector.
`java.lang.String`	`getDetectorID(int instrumentIndex, int detectorIndex)`	Get the ID property of Detector.
`java.lang.String`	`getDetectorLotNumber(int instrumentIndex, int detectorIndex)`	Get the LotNumber property of Detector.
`java.lang.String`	`getDetectorManufacturer(int instrumentIndex, int detectorIndex)`	Get the Manufacturer property of Detector.
`java.lang.String`	`getDetectorModel(int instrumentIndex, int detectorIndex)`	Get the Model property of Detector.
`java.lang.Double`	`getDetectorOffset(int instrumentIndex, int detectorIndex)`	Get the Offset property of Detector.
`java.lang.String`	`getDetectorSerialNumber(int instrumentIndex, int detectorIndex)`	Get the SerialNumber property of Detector.
`Binning`	`getDetectorSettingsBinning(int imageIndex, int channelIndex)`	Get the Binning property of DetectorSettings.
`java.lang.Double`	`getDetectorSettingsGain(int imageIndex, int channelIndex)`	Get the Gain property of DetectorSettings.
`java.lang.String`	`getDetectorSettingsID(int imageIndex, int channelIndex)`	Get the ID property of DetectorSettings.
`PositiveInteger`	`getDetectorSettingsIntegration(int imageIndex, int channelIndex)`	Get the Integration property of DetectorSettings.
`java.lang.Double`	`getDetectorSettingsOffset(int imageIndex, int channelIndex)`	Get the Offset property of DetectorSettings.
`Frequency`	`getDetectorSettingsReadOutRate(int imageIndex, int channelIndex)`	Get the ReadOutRate property of DetectorSettings.
`ElectricPotential`	`getDetectorSettingsVoltage(int imageIndex, int channelIndex)`	Get the Voltage property of DetectorSettings.
`java.lang.Double`	`getDetectorSettingsZoom(int imageIndex, int channelIndex)`	Get the Zoom property of DetectorSettings.
`DetectorType`	`getDetectorType(int instrumentIndex, int detectorIndex)`	Get the Type property of Detector.
`ElectricPotential`	`getDetectorVoltage(int instrumentIndex, int detectorIndex)`	Get the Voltage property of Detector.
`java.lang.Double`	`getDetectorZoom(int instrumentIndex, int detectorIndex)`	Get the Zoom property of Detector.
`java.lang.String`	`getDichroicAnnotationRef(int instrumentIndex, int dichroicIndex, int annotationRefIndex)`	Get the AnnotationRef property of Dichroic.
`int`	`getDichroicAnnotationRefCount(int instrumentIndex, int dichroicIndex)`	Get the number of AnnotationRef elements in Dichroic.
`int`	`getDichroicCount(int instrumentIndex)`	Get the number of Dichroic elements.
`java.lang.String`	`getDichroicID(int instrumentIndex, int dichroicIndex)`	Get the ID property of Dichroic.
`java.lang.String`	`getDichroicLotNumber(int instrumentIndex, int dichroicIndex)`	Get the LotNumber property of Dichroic.
`java.lang.String`	`getDichroicManufacturer(int instrumentIndex, int dichroicIndex)`	Get the Manufacturer property of Dichroic.
`java.lang.String`	`getDichroicModel(int instrumentIndex, int dichroicIndex)`	Get the Model property of Dichroic.
`java.lang.String`	`getDichroicSerialNumber(int instrumentIndex, int dichroicIndex)`	Get the SerialNumber property of Dichroic.
`int`	`getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)`	Get the number of links to a DoubleAnnotation.
`java.lang.String`	`getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of DoubleAnnotation.
`java.lang.String`	`getDoubleAnnotationAnnotator(int doubleAnnotationIndex)`	Get the Annotator property of DoubleAnnotation.
`int`	`getDoubleAnnotationCount()`	Get the number of DoubleAnnotation elements.
`java.lang.String`	`getDoubleAnnotationDescription(int doubleAnnotationIndex)`	Get the Description property of DoubleAnnotation.
`java.lang.String`	`getDoubleAnnotationID(int doubleAnnotationIndex)`	Get the ID property of DoubleAnnotation.
`java.lang.String`	`getDoubleAnnotationNamespace(int doubleAnnotationIndex)`	Get the Namespace property of DoubleAnnotation.
`java.lang.Double`	`getDoubleAnnotationValue(int doubleAnnotationIndex)`	Get the Value property of DoubleAnnotation.
`java.lang.String`	`getEllipseAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Ellipse.
`Color`	`getEllipseFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Ellipse.
`FillRule`	`getEllipseFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Ellipse.
`FontFamily`	`getEllipseFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Ellipse.
`Length`	`getEllipseFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Ellipse.
`FontStyle`	`getEllipseFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Ellipse.
`java.lang.String`	`getEllipseID(int ROIIndex, int shapeIndex)`	Get the ID property of Ellipse.
`java.lang.Boolean`	`getEllipseLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Ellipse.
`java.lang.Double`	`getEllipseRadiusX(int ROIIndex, int shapeIndex)`	Get the RadiusX property of Ellipse.
`java.lang.Double`	`getEllipseRadiusY(int ROIIndex, int shapeIndex)`	Get the RadiusY property of Ellipse.
`Color`	`getEllipseStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Ellipse.
`java.lang.String`	`getEllipseStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Ellipse.
`Length`	`getEllipseStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Ellipse.
`java.lang.String`	`getEllipseText(int ROIIndex, int shapeIndex)`	Get the Text property of Ellipse.
`NonNegativeInteger`	`getEllipseTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Ellipse.
`NonNegativeInteger`	`getEllipseTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Ellipse.
`NonNegativeInteger`	`getEllipseTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Ellipse.
`AffineTransform`	`getEllipseTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Ellipse.
`java.lang.Double`	`getEllipseX(int ROIIndex, int shapeIndex)`	Get the X property of Ellipse.
`java.lang.Double`	`getEllipseY(int ROIIndex, int shapeIndex)`	Get the Y property of Ellipse.
`int`	`getExperimentCount()`	Get the number of Experiment elements.
`java.lang.String`	`getExperimentDescription(int experimentIndex)`	Get the Description property of Experiment.
`java.lang.String`	`getExperimenterAnnotationRef(int experimenterIndex, int annotationRefIndex)`	Get the AnnotationRef property of Experimenter.
`int`	`getExperimenterAnnotationRefCount(int experimenterIndex)`	Get the number of AnnotationRef elements in Experimenter.
`int`	`getExperimenterCount()`	Get the number of Experimenter elements.
`java.lang.String`	`getExperimenterEmail(int experimenterIndex)`	Get the Email property of Experimenter.
`java.lang.String`	`getExperimenterFirstName(int experimenterIndex)`	Get the FirstName property of Experimenter.
`java.lang.String`	`getExperimenterGroupAnnotationRef(int experimenterGroupIndex, int annotationRefIndex)`	Get the AnnotationRef property of ExperimenterGroup.
`int`	`getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)`	Get the number of AnnotationRef elements in ExperimenterGroup.
`int`	`getExperimenterGroupCount()`	Get the number of ExperimenterGroup elements.
`java.lang.String`	`getExperimenterGroupDescription(int experimenterGroupIndex)`	Get the Description property of ExperimenterGroup.
`java.lang.String`	`getExperimenterGroupExperimenterRef(int experimenterGroupIndex, int experimenterRefIndex)`	Get the ExperimenterRef property of ExperimenterGroup.
`int`	`getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)`	Get the number of ExperimenterRef elements in ExperimenterGroup.
`java.lang.String`	`getExperimenterGroupID(int experimenterGroupIndex)`	Get the ID property of ExperimenterGroup.
`java.lang.String`	`getExperimenterGroupLeader(int experimenterGroupIndex, int leaderIndex)`	Get the Leader property of ExperimenterGroup.
`java.lang.String`	`getExperimenterGroupName(int experimenterGroupIndex)`	Get the Name property of ExperimenterGroup.
`java.lang.String`	`getExperimenterID(int experimenterIndex)`	Get the ID property of Experimenter.
`java.lang.String`	`getExperimenterInstitution(int experimenterIndex)`	Get the Institution property of Experimenter.
`java.lang.String`	`getExperimenterLastName(int experimenterIndex)`	Get the LastName property of Experimenter.
`java.lang.String`	`getExperimenterMiddleName(int experimenterIndex)`	Get the MiddleName property of Experimenter.
`java.lang.String`	`getExperimenterUserName(int experimenterIndex)`	Get the UserName property of Experimenter.
`java.lang.String`	`getExperimentExperimenterRef(int experimentIndex)`	Get the ExperimenterRef property of Experiment.
`java.lang.String`	`getExperimentID(int experimentIndex)`	Get the ID property of Experiment.
`ExperimentType`	`getExperimentType(int experimentIndex)`	Get the Type property of Experiment.
`java.lang.String`	`getFilamentAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Get the AnnotationRef property of Filament.
`java.lang.String`	`getFilamentID(int instrumentIndex, int lightSourceIndex)`	Get the ID property of Filament.
`java.lang.String`	`getFilamentLotNumber(int instrumentIndex, int lightSourceIndex)`	Get the LotNumber property of Filament.
`java.lang.String`	`getFilamentManufacturer(int instrumentIndex, int lightSourceIndex)`	Get the Manufacturer property of Filament.
`java.lang.String`	`getFilamentModel(int instrumentIndex, int lightSourceIndex)`	Get the Model property of Filament.
`Power`	`getFilamentPower(int instrumentIndex, int lightSourceIndex)`	Get the Power property of Filament.
`java.lang.String`	`getFilamentSerialNumber(int instrumentIndex, int lightSourceIndex)`	Get the SerialNumber property of Filament.
`FilamentType`	`getFilamentType(int instrumentIndex, int lightSourceIndex)`	Get the Type property of Filament.
`int`	`getFileAnnotationAnnotationCount(int fileAnnotationIndex)`	Get the number of links to a FileAnnotation.
`java.lang.String`	`getFileAnnotationAnnotationRef(int fileAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of FileAnnotation.
`java.lang.String`	`getFileAnnotationAnnotator(int fileAnnotationIndex)`	Get the Annotator property of FileAnnotation.
`int`	`getFileAnnotationCount()`	Get the number of FileAnnotation elements.
`java.lang.String`	`getFileAnnotationDescription(int fileAnnotationIndex)`	Get the Description property of FileAnnotation.
`java.lang.String`	`getFileAnnotationID(int fileAnnotationIndex)`	Get the ID property of FileAnnotation.
`java.lang.String`	`getFileAnnotationNamespace(int fileAnnotationIndex)`	Get the Namespace property of FileAnnotation.
`java.lang.String`	`getFilterAnnotationRef(int instrumentIndex, int filterIndex, int annotationRefIndex)`	Get the AnnotationRef property of Filter.
`int`	`getFilterAnnotationRefCount(int instrumentIndex, int filterIndex)`	Get the number of AnnotationRef elements in Filter.
`int`	`getFilterCount(int instrumentIndex)`	Get the number of Filter elements.
`java.lang.String`	`getFilterFilterWheel(int instrumentIndex, int filterIndex)`	Get the FilterWheel property of Filter.
`java.lang.String`	`getFilterID(int instrumentIndex, int filterIndex)`	Get the ID property of Filter.
`java.lang.String`	`getFilterLotNumber(int instrumentIndex, int filterIndex)`	Get the LotNumber property of Filter.
`java.lang.String`	`getFilterManufacturer(int instrumentIndex, int filterIndex)`	Get the Manufacturer property of Filter.
`java.lang.String`	`getFilterModel(int instrumentIndex, int filterIndex)`	Get the Model property of Filter.
`java.lang.String`	`getFilterSerialNumber(int instrumentIndex, int filterIndex)`	Get the SerialNumber property of Filter.
`int`	`getFilterSetCount(int instrumentIndex)`	Get the number of FilterSet elements.
`java.lang.String`	`getFilterSetDichroicRef(int instrumentIndex, int filterSetIndex)`	Get the DichroicRef property of FilterSet.
`java.lang.String`	`getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)`	Get the EmissionFilterRef property of FilterSet.
`int`	`getFilterSetEmissionFilterRefCount(int instrumentIndex, int filterSetIndex)`	Get the number of EmissionFilterRef elements in FilterSet.
`java.lang.String`	`getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)`	Get the ExcitationFilterRef property of FilterSet.
`int`	`getFilterSetExcitationFilterRefCount(int instrumentIndex, int filterSetIndex)`	Get the number of ExcitationFilterRef elements in FilterSet.
`java.lang.String`	`getFilterSetID(int instrumentIndex, int filterSetIndex)`	Get the ID property of FilterSet.
`java.lang.String`	`getFilterSetLotNumber(int instrumentIndex, int filterSetIndex)`	Get the LotNumber property of FilterSet.
`java.lang.String`	`getFilterSetManufacturer(int instrumentIndex, int filterSetIndex)`	Get the Manufacturer property of FilterSet.
`java.lang.String`	`getFilterSetModel(int instrumentIndex, int filterSetIndex)`	Get the Model property of FilterSet.
`java.lang.String`	`getFilterSetSerialNumber(int instrumentIndex, int filterSetIndex)`	Get the SerialNumber property of FilterSet.
`FilterType`	`getFilterType(int instrumentIndex, int filterIndex)`	Get the Type property of Filter.
`java.lang.String`	`getFolderAnnotationRef(int folderIndex, int annotationRefIndex)`	Get the AnnotationRef property of Folder.
`int`	`getFolderAnnotationRefCount(int folderIndex)`	Get the number of AnnotationRef elements in Folder.
`int`	`getFolderCount()`	Get the number of Folder elements.
`java.lang.String`	`getFolderDescription(int folderIndex)`	Get the Description property of Folder.
`java.lang.String`	`getFolderFolderRef(int folderIndex, int folderRefIndex)`	Get the FolderRef property of Folder.
`java.lang.String`	`getFolderID(int folderIndex)`	Get the ID property of Folder.
`java.lang.String`	`getFolderImageRef(int folderIndex, int imageRefIndex)`	Get the ImageRef property of Folder.
`int`	`getFolderImageRefCount(int folderIndex)`	Get the number of ImageRef elements in Folder.
`java.lang.String`	`getFolderName(int folderIndex)`	Get the Name property of Folder.
`int`	`getFolderRefCount(int folderIndex)`	Get the number of FolderRef elements.
`java.lang.String`	`getFolderROIRef(int folderIndex, int ROIRefIndex)`	Get the ROIRef property of Folder.
`int`	`getFolderROIRefCount(int folderIndex)`	Get the number of ROIRef elements in Folder.
`java.lang.String`	`getGenericExcitationSourceAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Get the AnnotationRef property of GenericExcitationSource.
`java.lang.String`	`getGenericExcitationSourceID(int instrumentIndex, int lightSourceIndex)`	Get the ID property of GenericExcitationSource.
`java.lang.String`	`getGenericExcitationSourceLotNumber(int instrumentIndex, int lightSourceIndex)`	Get the LotNumber property of GenericExcitationSource.
`java.lang.String`	`getGenericExcitationSourceManufacturer(int instrumentIndex, int lightSourceIndex)`	Get the Manufacturer property of GenericExcitationSource.
`java.util.List<MapPair>`	`getGenericExcitationSourceMap(int instrumentIndex, int lightSourceIndex)`	Gets the Map value associated with this generic light source
`java.lang.String`	`getGenericExcitationSourceModel(int instrumentIndex, int lightSourceIndex)`	Get the Model property of GenericExcitationSource.
`Power`	`getGenericExcitationSourcePower(int instrumentIndex, int lightSourceIndex)`	Get the Power property of GenericExcitationSource.
`java.lang.String`	`getGenericExcitationSourceSerialNumber(int instrumentIndex, int lightSourceIndex)`	Get the SerialNumber property of GenericExcitationSource.
`Timestamp`	`getImageAcquisitionDate(int imageIndex)`	Get the AcquisitionDate property of Image.
`java.lang.String`	`getImageAnnotationRef(int imageIndex, int annotationRefIndex)`	Get the AnnotationRef property of Image.
`int`	`getImageAnnotationRefCount(int imageIndex)`	Get the number of AnnotationRef elements in Image.
`int`	`getImageCount()`	Get the number of Image elements.
`java.lang.String`	`getImageDescription(int imageIndex)`	Get the Description property of Image.
`java.lang.String`	`getImageExperimenterGroupRef(int imageIndex)`	Get the ExperimenterGroupRef property of Image.
`java.lang.String`	`getImageExperimenterRef(int imageIndex)`	Get the ExperimenterRef property of Image.
`java.lang.String`	`getImageExperimentRef(int imageIndex)`	Get the ExperimentRef property of Image.
`java.lang.String`	`getImageID(int imageIndex)`	Get the ID property of Image.
`java.lang.String`	`getImageInstrumentRef(int imageIndex)`	Get the InstrumentRef property of Image.
`java.lang.String`	`getImageMicrobeamManipulationRef(int imageIndex, int microbeamManipulationRefIndex)`	Get the MicrobeamManipulationRef property of Image.
`java.lang.String`	`getImageName(int imageIndex)`	Get the Name property of Image.
`java.lang.String`	`getImageROIRef(int imageIndex, int ROIRefIndex)`	Get the ROIRef property of Image.
`int`	`getImageROIRefCount(int imageIndex)`	Get the number of ROIRef elements in Image.
`Pressure`	`getImagingEnvironmentAirPressure(int imageIndex)`	Get the AirPressure property of ImagingEnvironment.
`PercentFraction`	`getImagingEnvironmentCO2Percent(int imageIndex)`	Get the CO2Percent property of ImagingEnvironment.
`PercentFraction`	`getImagingEnvironmentHumidity(int imageIndex)`	Get the Humidity property of ImagingEnvironment.
`java.util.List<MapPair>`	`getImagingEnvironmentMap(int imageIndex)`	Gets the Map value associated with this imaging environment
`Temperature`	`getImagingEnvironmentTemperature(int imageIndex)`	Get the Temperature property of ImagingEnvironment.
`java.lang.String`	`getInstrumentAnnotationRef(int instrumentIndex, int annotationRefIndex)`	Get the AnnotationRef property of Instrument.
`int`	`getInstrumentAnnotationRefCount(int instrumentIndex)`	Get the number of AnnotationRef elements in Instrument.
`int`	`getInstrumentCount()`	Get the number of Instrument elements.
`java.lang.String`	`getInstrumentID(int instrumentIndex)`	Get the ID property of Instrument.
`java.lang.String`	`getLabelAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Label.
`Color`	`getLabelFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Label.
`FillRule`	`getLabelFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Label.
`FontFamily`	`getLabelFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Label.
`Length`	`getLabelFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Label.
`FontStyle`	`getLabelFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Label.
`java.lang.String`	`getLabelID(int ROIIndex, int shapeIndex)`	Get the ID property of Label.
`java.lang.Boolean`	`getLabelLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Label.
`Color`	`getLabelStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Label.
`java.lang.String`	`getLabelStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Label.
`Length`	`getLabelStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Label.
`java.lang.String`	`getLabelText(int ROIIndex, int shapeIndex)`	Get the Text property of Label.
`NonNegativeInteger`	`getLabelTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Label.
`NonNegativeInteger`	`getLabelTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Label.
`NonNegativeInteger`	`getLabelTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Label.
`AffineTransform`	`getLabelTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Label.
`java.lang.Double`	`getLabelX(int ROIIndex, int shapeIndex)`	Get the X property of Label.
`java.lang.Double`	`getLabelY(int ROIIndex, int shapeIndex)`	Get the Y property of Label.
`java.lang.String`	`getLaserAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Get the AnnotationRef property of Laser.
`PositiveInteger`	`getLaserFrequencyMultiplication(int instrumentIndex, int lightSourceIndex)`	Get the FrequencyMultiplication property of Laser.
`java.lang.String`	`getLaserID(int instrumentIndex, int lightSourceIndex)`	Get the ID property of Laser.
`LaserMedium`	`getLaserLaserMedium(int instrumentIndex, int lightSourceIndex)`	Get the LaserMedium property of Laser.
`java.lang.String`	`getLaserLotNumber(int instrumentIndex, int lightSourceIndex)`	Get the LotNumber property of Laser.
`java.lang.String`	`getLaserManufacturer(int instrumentIndex, int lightSourceIndex)`	Get the Manufacturer property of Laser.
`java.lang.String`	`getLaserModel(int instrumentIndex, int lightSourceIndex)`	Get the Model property of Laser.
`java.lang.Boolean`	`getLaserPockelCell(int instrumentIndex, int lightSourceIndex)`	Get the PockelCell property of Laser.
`Power`	`getLaserPower(int instrumentIndex, int lightSourceIndex)`	Get the Power property of Laser.
`Pulse`	`getLaserPulse(int instrumentIndex, int lightSourceIndex)`	Get the Pulse property of Laser.
`java.lang.String`	`getLaserPump(int instrumentIndex, int lightSourceIndex)`	Get the Pump property of Laser.
`Frequency`	`getLaserRepetitionRate(int instrumentIndex, int lightSourceIndex)`	Get the RepetitionRate property of Laser.
`java.lang.String`	`getLaserSerialNumber(int instrumentIndex, int lightSourceIndex)`	Get the SerialNumber property of Laser.
`java.lang.Boolean`	`getLaserTuneable(int instrumentIndex, int lightSourceIndex)`	Get the Tuneable property of Laser.
`LaserType`	`getLaserType(int instrumentIndex, int lightSourceIndex)`	Get the Type property of Laser.
`Length`	`getLaserWavelength(int instrumentIndex, int lightSourceIndex)`	Get the Wavelength property of Laser.
`int`	`getLeaderCount(int experimenterGroupIndex)`	Get the number of Leader elements.
`java.lang.String`	`getLightEmittingDiodeAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Get the AnnotationRef property of LightEmittingDiode.
`java.lang.String`	`getLightEmittingDiodeID(int instrumentIndex, int lightSourceIndex)`	Get the ID property of LightEmittingDiode.
`java.lang.String`	`getLightEmittingDiodeLotNumber(int instrumentIndex, int lightSourceIndex)`	Get the LotNumber property of LightEmittingDiode.
`java.lang.String`	`getLightEmittingDiodeManufacturer(int instrumentIndex, int lightSourceIndex)`	Get the Manufacturer property of LightEmittingDiode.
`java.lang.String`	`getLightEmittingDiodeModel(int instrumentIndex, int lightSourceIndex)`	Get the Model property of LightEmittingDiode.
`Power`	`getLightEmittingDiodePower(int instrumentIndex, int lightSourceIndex)`	Get the Power property of LightEmittingDiode.
`java.lang.String`	`getLightEmittingDiodeSerialNumber(int instrumentIndex, int lightSourceIndex)`	Get the SerialNumber property of LightEmittingDiode.
`java.lang.String`	`getLightPathAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)`	Get the AnnotationRef property of LightPath.
`int`	`getLightPathAnnotationRefCount(int imageIndex, int channelIndex)`	Get the number of AnnotationRef elements in LightPath.
`java.lang.String`	`getLightPathDichroicRef(int imageIndex, int channelIndex)`	Get the DichroicRef property of LightPath.
`java.lang.String`	`getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex)`	Get the EmissionFilterRef property of LightPath.
`int`	`getLightPathEmissionFilterRefCount(int imageIndex, int channelIndex)`	Get the number of EmissionFilterRef elements in LightPath.
`java.lang.String`	`getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex)`	Get the ExcitationFilterRef property of LightPath.
`int`	`getLightPathExcitationFilterRefCount(int imageIndex, int channelIndex)`	Get the number of ExcitationFilterRef elements in LightPath.
`int`	`getLightSourceAnnotationRefCount(int instrumentIndex, int lightSourceIndex)`	Get the number of AnnotationRef elements in LightSource.
`int`	`getLightSourceCount(int instrumentIndex)`	Get the number of LightSource elements.
`java.lang.String`	`getLightSourceType(int instrumentIndex, int lightSourceIndex)`	Get the type of a LightSource.
`java.lang.String`	`getLineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Line.
`Color`	`getLineFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Line.
`FillRule`	`getLineFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Line.
`FontFamily`	`getLineFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Line.
`Length`	`getLineFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Line.
`FontStyle`	`getLineFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Line.
`java.lang.String`	`getLineID(int ROIIndex, int shapeIndex)`	Get the ID property of Line.
`java.lang.Boolean`	`getLineLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Line.
`Marker`	`getLineMarkerEnd(int ROIIndex, int shapeIndex)`	Get the MarkerEnd property of Line.
`Marker`	`getLineMarkerStart(int ROIIndex, int shapeIndex)`	Get the MarkerStart property of Line.
`Color`	`getLineStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Line.
`java.lang.String`	`getLineStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Line.
`Length`	`getLineStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Line.
`java.lang.String`	`getLineText(int ROIIndex, int shapeIndex)`	Get the Text property of Line.
`NonNegativeInteger`	`getLineTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Line.
`NonNegativeInteger`	`getLineTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Line.
`NonNegativeInteger`	`getLineTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Line.
`AffineTransform`	`getLineTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Line.
`java.lang.Double`	`getLineX1(int ROIIndex, int shapeIndex)`	Get the X1 property of Line.
`java.lang.Double`	`getLineX2(int ROIIndex, int shapeIndex)`	Get the X2 property of Line.
`java.lang.Double`	`getLineY1(int ROIIndex, int shapeIndex)`	Get the Y1 property of Line.
`java.lang.Double`	`getLineY2(int ROIIndex, int shapeIndex)`	Get the Y2 property of Line.
`int`	`getListAnnotationAnnotationCount(int listAnnotationIndex)`	Get the number of links to a ListAnnotation.
`java.lang.String`	`getListAnnotationAnnotationRef(int listAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of ListAnnotation.
`java.lang.String`	`getListAnnotationAnnotator(int listAnnotationIndex)`	Get the Annotator property of ListAnnotation.
`int`	`getListAnnotationCount()`	Get the number of ListAnnotation elements.
`java.lang.String`	`getListAnnotationDescription(int listAnnotationIndex)`	Get the Description property of ListAnnotation.
`java.lang.String`	`getListAnnotationID(int listAnnotationIndex)`	Get the ID property of ListAnnotation.
`java.lang.String`	`getListAnnotationNamespace(int listAnnotationIndex)`	Get the Namespace property of ListAnnotation.
`int`	`getLongAnnotationAnnotationCount(int longAnnotationIndex)`	Get the number of links to a LongAnnotation.
`java.lang.String`	`getLongAnnotationAnnotationRef(int longAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of LongAnnotation.
`java.lang.String`	`getLongAnnotationAnnotator(int longAnnotationIndex)`	Get the Annotator property of LongAnnotation.
`int`	`getLongAnnotationCount()`	Get the number of LongAnnotation elements.
`java.lang.String`	`getLongAnnotationDescription(int longAnnotationIndex)`	Get the Description property of LongAnnotation.
`java.lang.String`	`getLongAnnotationID(int longAnnotationIndex)`	Get the ID property of LongAnnotation.
`java.lang.String`	`getLongAnnotationNamespace(int longAnnotationIndex)`	Get the Namespace property of LongAnnotation.
`java.lang.Long`	`getLongAnnotationValue(int longAnnotationIndex)`	Get the Value property of LongAnnotation.
`int`	`getMapAnnotationAnnotationCount(int mapAnnotationIndex)`	Get the number of links to a MapAnnotation.
`java.lang.String`	`getMapAnnotationAnnotationRef(int mapAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of MapAnnotation.
`java.lang.String`	`getMapAnnotationAnnotator(int mapAnnotationIndex)`	Get the Annotator property of MapAnnotation.
`int`	`getMapAnnotationCount()`	Get the number of MapAnnotation elements.
`java.lang.String`	`getMapAnnotationDescription(int mapAnnotationIndex)`	Get the Description property of MapAnnotation.
`java.lang.String`	`getMapAnnotationID(int mapAnnotationIndex)`	Get the ID property of MapAnnotation.
`java.lang.String`	`getMapAnnotationNamespace(int mapAnnotationIndex)`	Get the Namespace property of MapAnnotation.
`java.util.List<MapPair>`	`getMapAnnotationValue(int mapAnnotationIndex)`	Gets the Map value associated with this annotation
`java.lang.String`	`getMaskAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Mask.
`byte[]`	`getMaskBinData(int ROIIndex, int shapeIndex)`	Get the Base64Binary property of BinData.
`java.lang.Boolean`	`getMaskBinDataBigEndian(int ROIIndex, int shapeIndex)`	Get the BigEndian property of BinData.
`Compression`	`getMaskBinDataCompression(int ROIIndex, int shapeIndex)`	Get the Compression property of BinData.
`NonNegativeLong`	`getMaskBinDataLength(int ROIIndex, int shapeIndex)`	Get the Length property of BinData.
`Color`	`getMaskFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Mask.
`FillRule`	`getMaskFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Mask.
`FontFamily`	`getMaskFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Mask.
`Length`	`getMaskFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Mask.
`FontStyle`	`getMaskFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Mask.
`java.lang.Double`	`getMaskHeight(int ROIIndex, int shapeIndex)`	Get the Height property of Mask.
`java.lang.String`	`getMaskID(int ROIIndex, int shapeIndex)`	Get the ID property of Mask.
`java.lang.Boolean`	`getMaskLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Mask.
`Color`	`getMaskStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Mask.
`java.lang.String`	`getMaskStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Mask.
`Length`	`getMaskStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Mask.
`java.lang.String`	`getMaskText(int ROIIndex, int shapeIndex)`	Get the Text property of Mask.
`NonNegativeInteger`	`getMaskTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Mask.
`NonNegativeInteger`	`getMaskTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Mask.
`NonNegativeInteger`	`getMaskTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Mask.
`AffineTransform`	`getMaskTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Mask.
`java.lang.Double`	`getMaskWidth(int ROIIndex, int shapeIndex)`	Get the Width property of Mask.
`java.lang.Double`	`getMaskX(int ROIIndex, int shapeIndex)`	Get the X property of Mask.
`java.lang.Double`	`getMaskY(int ROIIndex, int shapeIndex)`	Get the Y property of Mask.
`int`	`getMicrobeamManipulationCount(int experimentIndex)`	Get the number of MicrobeamManipulation elements.
`java.lang.String`	`getMicrobeamManipulationDescription(int experimentIndex, int microbeamManipulationIndex)`	Get the Description property of MicrobeamManipulation.
`java.lang.String`	`getMicrobeamManipulationExperimenterRef(int experimentIndex, int microbeamManipulationIndex)`	Get the ExperimenterRef property of MicrobeamManipulation.
`java.lang.String`	`getMicrobeamManipulationID(int experimentIndex, int microbeamManipulationIndex)`	Get the ID property of MicrobeamManipulation.
`PercentFraction`	`getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`	Get the Attenuation property of LightSourceSettings.
`int`	`getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex, int microbeamManipulationIndex)`	Get the number of LightSourceSettings elements in MicrobeamManipulation.
`java.lang.String`	`getMicrobeamManipulationLightSourceSettingsID(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`	Get the ID property of LightSourceSettings.
`Length`	`getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`	Get the Wavelength property of LightSourceSettings.
`int`	`getMicrobeamManipulationRefCount(int imageIndex)`	Get the number of MicrobeamManipulationRef elements.
`java.lang.String`	`getMicrobeamManipulationROIRef(int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)`	Get the ROIRef property of MicrobeamManipulation.
`int`	`getMicrobeamManipulationROIRefCount(int experimentIndex, int microbeamManipulationIndex)`	Get the number of ROIRef elements in MicrobeamManipulation.
`MicrobeamManipulationType`	`getMicrobeamManipulationType(int experimentIndex, int microbeamManipulationIndex)`	Get the Type property of MicrobeamManipulation.
`java.lang.String`	`getMicroscopeLotNumber(int instrumentIndex)`	Get the LotNumber property of Microscope.
`java.lang.String`	`getMicroscopeManufacturer(int instrumentIndex)`	Get the Manufacturer property of Microscope.
`java.lang.String`	`getMicroscopeModel(int instrumentIndex)`	Get the Model property of Microscope.
`java.lang.String`	`getMicroscopeSerialNumber(int instrumentIndex)`	Get the SerialNumber property of Microscope.
`MicroscopeType`	`getMicroscopeType(int instrumentIndex)`	Get the Type property of Microscope.
`java.lang.String`	`getObjectiveAnnotationRef(int instrumentIndex, int objectiveIndex, int annotationRefIndex)`	Get the AnnotationRef property of Objective.
`int`	`getObjectiveAnnotationRefCount(int instrumentIndex, int objectiveIndex)`	Get the number of AnnotationRef elements in Objective.
`java.lang.Double`	`getObjectiveCalibratedMagnification(int instrumentIndex, int objectiveIndex)`	Get the CalibratedMagnification property of Objective.
`Correction`	`getObjectiveCorrection(int instrumentIndex, int objectiveIndex)`	Get the Correction property of Objective.
`int`	`getObjectiveCount(int instrumentIndex)`	Get the number of Objective elements.
`java.lang.String`	`getObjectiveID(int instrumentIndex, int objectiveIndex)`	Get the ID property of Objective.
`Immersion`	`getObjectiveImmersion(int instrumentIndex, int objectiveIndex)`	Get the Immersion property of Objective.
`java.lang.Boolean`	`getObjectiveIris(int instrumentIndex, int objectiveIndex)`	Get the Iris property of Objective.
`java.lang.Double`	`getObjectiveLensNA(int instrumentIndex, int objectiveIndex)`	Get the LensNA property of Objective.
`java.lang.String`	`getObjectiveLotNumber(int instrumentIndex, int objectiveIndex)`	Get the LotNumber property of Objective.
`java.lang.String`	`getObjectiveManufacturer(int instrumentIndex, int objectiveIndex)`	Get the Manufacturer property of Objective.
`java.lang.String`	`getObjectiveModel(int instrumentIndex, int objectiveIndex)`	Get the Model property of Objective.
`java.lang.Double`	`getObjectiveNominalMagnification(int instrumentIndex, int objectiveIndex)`	Get the NominalMagnification property of Objective.
`java.lang.String`	`getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex)`	Get the SerialNumber property of Objective.
`java.lang.Double`	`getObjectiveSettingsCorrectionCollar(int imageIndex)`	Get the CorrectionCollar property of ObjectiveSettings.
`java.lang.String`	`getObjectiveSettingsID(int imageIndex)`	Get the ID property of ObjectiveSettings.
`Medium`	`getObjectiveSettingsMedium(int imageIndex)`	Get the Medium property of ObjectiveSettings.
`java.lang.Double`	`getObjectiveSettingsRefractiveIndex(int imageIndex)`	Get the RefractiveIndex property of ObjectiveSettings.
`Length`	`getObjectiveWorkingDistance(int instrumentIndex, int objectiveIndex)`	Get the WorkingDistance property of Objective.
`java.lang.Boolean`	`getPixelsBigEndian(int imageIndex)`	Get the BigEndian property of Pixels.
`byte[]`	`getPixelsBinData(int imageIndex, int binDataIndex)`	Get the Base64Binary property of BinData.
`java.lang.Boolean`	`getPixelsBinDataBigEndian(int imageIndex, int binDataIndex)`	Get the BigEndian property of BinData.
`Compression`	`getPixelsBinDataCompression(int imageIndex, int binDataIndex)`	Get the Compression property of BinData.
`int`	`getPixelsBinDataCount(int imageIndex)`	Get the number of BinData elements in Pixels.
`NonNegativeLong`	`getPixelsBinDataLength(int imageIndex, int binDataIndex)`	Get the Length property of BinData.
`DimensionOrder`	`getPixelsDimensionOrder(int imageIndex)`	Get the DimensionOrder property of Pixels.
`java.lang.String`	`getPixelsID(int imageIndex)`	Get the ID property of Pixels.
`java.lang.Boolean`	`getPixelsInterleaved(int imageIndex)`	Get the Interleaved property of Pixels.
`Length`	`getPixelsPhysicalSizeX(int imageIndex)`	Get the PhysicalSizeX property of Pixels.
`Length`	`getPixelsPhysicalSizeY(int imageIndex)`	Get the PhysicalSizeY property of Pixels.
`Length`	`getPixelsPhysicalSizeZ(int imageIndex)`	Get the PhysicalSizeZ property of Pixels.
`PositiveInteger`	`getPixelsSignificantBits(int imageIndex)`	Get the SignificantBits property of Pixels.
`PositiveInteger`	`getPixelsSizeC(int imageIndex)`	Get the SizeC property of Pixels.
`PositiveInteger`	`getPixelsSizeT(int imageIndex)`	Get the SizeT property of Pixels.
`PositiveInteger`	`getPixelsSizeX(int imageIndex)`	Get the SizeX property of Pixels.
`PositiveInteger`	`getPixelsSizeY(int imageIndex)`	Get the SizeY property of Pixels.
`PositiveInteger`	`getPixelsSizeZ(int imageIndex)`	Get the SizeZ property of Pixels.
`Time`	`getPixelsTimeIncrement(int imageIndex)`	Get the TimeIncrement property of Pixels.
`PixelType`	`getPixelsType(int imageIndex)`	Get the Type property of Pixels.
`java.lang.String`	`getPlaneAnnotationRef(int imageIndex, int planeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Plane.
`int`	`getPlaneAnnotationRefCount(int imageIndex, int planeIndex)`	Get the number of AnnotationRef elements in Plane.
`int`	`getPlaneCount(int imageIndex)`	Get the number of Plane elements.
`Time`	`getPlaneDeltaT(int imageIndex, int planeIndex)`	Get the DeltaT property of Plane.
`Time`	`getPlaneExposureTime(int imageIndex, int planeIndex)`	Get the ExposureTime property of Plane.
`java.lang.String`	`getPlaneHashSHA1(int imageIndex, int planeIndex)`	Get the HashSHA1 property of Plane.
`Length`	`getPlanePositionX(int imageIndex, int planeIndex)`	Get the PositionX property of Plane.
`Length`	`getPlanePositionY(int imageIndex, int planeIndex)`	Get the PositionY property of Plane.
`Length`	`getPlanePositionZ(int imageIndex, int planeIndex)`	Get the PositionZ property of Plane.
`NonNegativeInteger`	`getPlaneTheC(int imageIndex, int planeIndex)`	Get the TheC property of Plane.
`NonNegativeInteger`	`getPlaneTheT(int imageIndex, int planeIndex)`	Get the TheT property of Plane.
`NonNegativeInteger`	`getPlaneTheZ(int imageIndex, int planeIndex)`	Get the TheZ property of Plane.
`java.lang.String`	`getPlateAcquisitionAnnotationRef(int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)`	Get the AnnotationRef property of PlateAcquisition.
`int`	`getPlateAcquisitionAnnotationRefCount(int plateIndex, int plateAcquisitionIndex)`	Get the number of AnnotationRef elements in PlateAcquisition.
`int`	`getPlateAcquisitionCount(int plateIndex)`	Get the number of PlateAcquisition elements.
`java.lang.String`	`getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex)`	Get the Description property of PlateAcquisition.
`Timestamp`	`getPlateAcquisitionEndTime(int plateIndex, int plateAcquisitionIndex)`	Get the EndTime property of PlateAcquisition.
`java.lang.String`	`getPlateAcquisitionID(int plateIndex, int plateAcquisitionIndex)`	Get the ID property of PlateAcquisition.
`PositiveInteger`	`getPlateAcquisitionMaximumFieldCount(int plateIndex, int plateAcquisitionIndex)`	Get the MaximumFieldCount property of PlateAcquisition.
`java.lang.String`	`getPlateAcquisitionName(int plateIndex, int plateAcquisitionIndex)`	Get the Name property of PlateAcquisition.
`Timestamp`	`getPlateAcquisitionStartTime(int plateIndex, int plateAcquisitionIndex)`	Get the StartTime property of PlateAcquisition.
`java.lang.String`	`getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)`	Get the WellSampleRef property of PlateAcquisition.
`java.lang.String`	`getPlateAnnotationRef(int plateIndex, int annotationRefIndex)`	Get the AnnotationRef property of Plate.
`int`	`getPlateAnnotationRefCount(int plateIndex)`	Get the number of AnnotationRef elements in Plate.
`NamingConvention`	`getPlateColumnNamingConvention(int plateIndex)`	Get the ColumnNamingConvention property of Plate.
`PositiveInteger`	`getPlateColumns(int plateIndex)`	Get the Columns property of Plate.
`int`	`getPlateCount()`	Get the number of Plate elements.
`java.lang.String`	`getPlateDescription(int plateIndex)`	Get the Description property of Plate.
`java.lang.String`	`getPlateExternalIdentifier(int plateIndex)`	Get the ExternalIdentifier property of Plate.
`NonNegativeInteger`	`getPlateFieldIndex(int plateIndex)`	Get the FieldIndex property of Plate.
`java.lang.String`	`getPlateID(int plateIndex)`	Get the ID property of Plate.
`java.lang.String`	`getPlateName(int plateIndex)`	Get the Name property of Plate.
`int`	`getPlateRefCount(int screenIndex)`	Get the number of PlateRef elements.
`NamingConvention`	`getPlateRowNamingConvention(int plateIndex)`	Get the RowNamingConvention property of Plate.
`PositiveInteger`	`getPlateRows(int plateIndex)`	Get the Rows property of Plate.
`java.lang.String`	`getPlateStatus(int plateIndex)`	Get the Status property of Plate.
`Length`	`getPlateWellOriginX(int plateIndex)`	Get the WellOriginX property of Plate.
`Length`	`getPlateWellOriginY(int plateIndex)`	Get the WellOriginY property of Plate.
`java.lang.String`	`getPointAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Point.
`Color`	`getPointFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Point.
`FillRule`	`getPointFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Point.
`FontFamily`	`getPointFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Point.
`Length`	`getPointFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Point.
`FontStyle`	`getPointFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Point.
`java.lang.String`	`getPointID(int ROIIndex, int shapeIndex)`	Get the ID property of Point.
`java.lang.Boolean`	`getPointLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Point.
`Color`	`getPointStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Point.
`java.lang.String`	`getPointStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Point.
`Length`	`getPointStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Point.
`java.lang.String`	`getPointText(int ROIIndex, int shapeIndex)`	Get the Text property of Point.
`NonNegativeInteger`	`getPointTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Point.
`NonNegativeInteger`	`getPointTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Point.
`NonNegativeInteger`	`getPointTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Point.
`AffineTransform`	`getPointTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Point.
`java.lang.Double`	`getPointX(int ROIIndex, int shapeIndex)`	Get the X property of Point.
`java.lang.Double`	`getPointY(int ROIIndex, int shapeIndex)`	Get the Y property of Point.
`java.lang.String`	`getPolygonAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Polygon.
`Color`	`getPolygonFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Polygon.
`FillRule`	`getPolygonFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Polygon.
`FontFamily`	`getPolygonFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Polygon.
`Length`	`getPolygonFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Polygon.
`FontStyle`	`getPolygonFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Polygon.
`java.lang.String`	`getPolygonID(int ROIIndex, int shapeIndex)`	Get the ID property of Polygon.
`java.lang.Boolean`	`getPolygonLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Polygon.
`java.lang.String`	`getPolygonPoints(int ROIIndex, int shapeIndex)`	Get the Points property of Polygon.
`Color`	`getPolygonStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Polygon.
`java.lang.String`	`getPolygonStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Polygon.
`Length`	`getPolygonStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Polygon.
`java.lang.String`	`getPolygonText(int ROIIndex, int shapeIndex)`	Get the Text property of Polygon.
`NonNegativeInteger`	`getPolygonTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Polygon.
`NonNegativeInteger`	`getPolygonTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Polygon.
`NonNegativeInteger`	`getPolygonTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Polygon.
`AffineTransform`	`getPolygonTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Polygon.
`java.lang.String`	`getPolylineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Polyline.
`Color`	`getPolylineFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Polyline.
`FillRule`	`getPolylineFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Polyline.
`FontFamily`	`getPolylineFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Polyline.
`Length`	`getPolylineFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Polyline.
`FontStyle`	`getPolylineFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Polyline.
`java.lang.String`	`getPolylineID(int ROIIndex, int shapeIndex)`	Get the ID property of Polyline.
`java.lang.Boolean`	`getPolylineLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Polyline.
`Marker`	`getPolylineMarkerEnd(int ROIIndex, int shapeIndex)`	Get the MarkerEnd property of Polyline.
`Marker`	`getPolylineMarkerStart(int ROIIndex, int shapeIndex)`	Get the MarkerStart property of Polyline.
`java.lang.String`	`getPolylinePoints(int ROIIndex, int shapeIndex)`	Get the Points property of Polyline.
`Color`	`getPolylineStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Polyline.
`java.lang.String`	`getPolylineStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Polyline.
`Length`	`getPolylineStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Polyline.
`java.lang.String`	`getPolylineText(int ROIIndex, int shapeIndex)`	Get the Text property of Polyline.
`NonNegativeInteger`	`getPolylineTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Polyline.
`NonNegativeInteger`	`getPolylineTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Polyline.
`NonNegativeInteger`	`getPolylineTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Polyline.
`AffineTransform`	`getPolylineTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Polyline.
`java.lang.String`	`getProjectAnnotationRef(int projectIndex, int annotationRefIndex)`	Get the AnnotationRef property of Project.
`int`	`getProjectAnnotationRefCount(int projectIndex)`	Get the number of AnnotationRef elements in Project.
`int`	`getProjectCount()`	Get the number of Project elements.
`java.lang.String`	`getProjectDatasetRef(int projectIndex, int datasetRefIndex)`	Get the DatasetRef property of Project.
`java.lang.String`	`getProjectDescription(int projectIndex)`	Get the Description property of Project.
`java.lang.String`	`getProjectExperimenterGroupRef(int projectIndex)`	Get the ExperimenterGroupRef property of Project.
`java.lang.String`	`getProjectExperimenterRef(int projectIndex)`	Get the ExperimenterRef property of Project.
`java.lang.String`	`getProjectID(int projectIndex)`	Get the ID property of Project.
`java.lang.String`	`getProjectName(int projectIndex)`	Get the Name property of Project.
`java.lang.String`	`getReagentAnnotationRef(int screenIndex, int reagentIndex, int annotationRefIndex)`	Get the AnnotationRef property of Reagent.
`int`	`getReagentAnnotationRefCount(int screenIndex, int reagentIndex)`	Get the number of AnnotationRef elements in Reagent.
`int`	`getReagentCount(int screenIndex)`	Get the number of Reagent elements.
`java.lang.String`	`getReagentDescription(int screenIndex, int reagentIndex)`	Get the Description property of Reagent.
`java.lang.String`	`getReagentID(int screenIndex, int reagentIndex)`	Get the ID property of Reagent.
`java.lang.String`	`getReagentName(int screenIndex, int reagentIndex)`	Get the Name property of Reagent.
`java.lang.String`	`getReagentReagentIdentifier(int screenIndex, int reagentIndex)`	Get the ReagentIdentifier property of Reagent.
`java.lang.String`	`getRectangleAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)`	Get the AnnotationRef property of Rectangle.
`Color`	`getRectangleFillColor(int ROIIndex, int shapeIndex)`	Get the FillColor property of Rectangle.
`FillRule`	`getRectangleFillRule(int ROIIndex, int shapeIndex)`	Get the FillRule property of Rectangle.
`FontFamily`	`getRectangleFontFamily(int ROIIndex, int shapeIndex)`	Get the FontFamily property of Rectangle.
`Length`	`getRectangleFontSize(int ROIIndex, int shapeIndex)`	Get the FontSize property of Rectangle.
`FontStyle`	`getRectangleFontStyle(int ROIIndex, int shapeIndex)`	Get the FontStyle property of Rectangle.
`java.lang.Double`	`getRectangleHeight(int ROIIndex, int shapeIndex)`	Get the Height property of Rectangle.
`java.lang.String`	`getRectangleID(int ROIIndex, int shapeIndex)`	Get the ID property of Rectangle.
`java.lang.Boolean`	`getRectangleLocked(int ROIIndex, int shapeIndex)`	Get the Locked property of Rectangle.
`Color`	`getRectangleStrokeColor(int ROIIndex, int shapeIndex)`	Get the StrokeColor property of Rectangle.
`java.lang.String`	`getRectangleStrokeDashArray(int ROIIndex, int shapeIndex)`	Get the StrokeDashArray property of Rectangle.
`Length`	`getRectangleStrokeWidth(int ROIIndex, int shapeIndex)`	Get the StrokeWidth property of Rectangle.
`java.lang.String`	`getRectangleText(int ROIIndex, int shapeIndex)`	Get the Text property of Rectangle.
`NonNegativeInteger`	`getRectangleTheC(int ROIIndex, int shapeIndex)`	Get the TheC property of Rectangle.
`NonNegativeInteger`	`getRectangleTheT(int ROIIndex, int shapeIndex)`	Get the TheT property of Rectangle.
`NonNegativeInteger`	`getRectangleTheZ(int ROIIndex, int shapeIndex)`	Get the TheZ property of Rectangle.
`AffineTransform`	`getRectangleTransform(int ROIIndex, int shapeIndex)`	Get the Transform property of Rectangle.
`java.lang.Double`	`getRectangleWidth(int ROIIndex, int shapeIndex)`	Get the Width property of Rectangle.
`java.lang.Double`	`getRectangleX(int ROIIndex, int shapeIndex)`	Get the X property of Rectangle.
`java.lang.Double`	`getRectangleY(int ROIIndex, int shapeIndex)`	Get the Y property of Rectangle.
`java.lang.String`	`getRightsRightsHeld()`	Get the RightsHeld property of Rights.
`java.lang.String`	`getRightsRightsHolder()`	Get the RightsHolder property of Rights.
`java.lang.String`	`getROIAnnotationRef(int ROIIndex, int annotationRefIndex)`	Get the AnnotationRef property of ROI.
`int`	`getROIAnnotationRefCount(int ROIIndex)`	Get the number of AnnotationRef elements in ROI.
`int`	`getROICount()`	Get the number of ROI elements.
`java.lang.String`	`getROIDescription(int ROIIndex)`	Get the Description property of ROI.
`java.lang.String`	`getROIID(int ROIIndex)`	Get the ID property of ROI.
`java.lang.String`	`getROIName(int ROIIndex)`	Get the Name property of ROI.
`MetadataRoot`	`getRoot()`	Unsupported with an AggregateMetadata.
`java.lang.String`	`getScreenAnnotationRef(int screenIndex, int annotationRefIndex)`	Get the AnnotationRef property of Screen.
`int`	`getScreenAnnotationRefCount(int screenIndex)`	Get the number of AnnotationRef elements in Screen.
`int`	`getScreenCount()`	Get the number of Screen elements.
`java.lang.String`	`getScreenDescription(int screenIndex)`	Get the Description property of Screen.
`java.lang.String`	`getScreenID(int screenIndex)`	Get the ID property of Screen.
`java.lang.String`	`getScreenName(int screenIndex)`	Get the Name property of Screen.
`java.lang.String`	`getScreenPlateRef(int screenIndex, int plateRefIndex)`	Get the PlateRef property of Screen.
`java.lang.String`	`getScreenProtocolDescription(int screenIndex)`	Get the ProtocolDescription property of Screen.
`java.lang.String`	`getScreenProtocolIdentifier(int screenIndex)`	Get the ProtocolIdentifier property of Screen.
`java.lang.String`	`getScreenReagentSetDescription(int screenIndex)`	Get the ReagentSetDescription property of Screen.
`java.lang.String`	`getScreenReagentSetIdentifier(int screenIndex)`	Get the ReagentSetIdentifier property of Screen.
`java.lang.String`	`getScreenType(int screenIndex)`	Get the Type property of Screen.
`int`	`getShapeAnnotationRefCount(int ROIIndex, int shapeIndex)`	Get the number of AnnotationRef elements in Shape.
`int`	`getShapeCount(int ROIIndex)`	Get the number of Shape elements.
`java.lang.String`	`getShapeType(int ROIIndex, int shapeIndex)`	Get the type of a Shape.
`java.lang.String`	`getStageLabelName(int imageIndex)`	Get the Name property of StageLabel.
`Length`	`getStageLabelX(int imageIndex)`	Get the X property of StageLabel.
`Length`	`getStageLabelY(int imageIndex)`	Get the Y property of StageLabel.
`Length`	`getStageLabelZ(int imageIndex)`	Get the Z property of StageLabel.
`int`	`getTagAnnotationAnnotationCount(int tagAnnotationIndex)`	Get the number of links to a TagAnnotation.
`java.lang.String`	`getTagAnnotationAnnotationRef(int tagAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of TagAnnotation.
`java.lang.String`	`getTagAnnotationAnnotator(int tagAnnotationIndex)`	Get the Annotator property of TagAnnotation.
`int`	`getTagAnnotationCount()`	Get the number of TagAnnotation elements.
`java.lang.String`	`getTagAnnotationDescription(int tagAnnotationIndex)`	Get the Description property of TagAnnotation.
`java.lang.String`	`getTagAnnotationID(int tagAnnotationIndex)`	Get the ID property of TagAnnotation.
`java.lang.String`	`getTagAnnotationNamespace(int tagAnnotationIndex)`	Get the Namespace property of TagAnnotation.
`java.lang.String`	`getTagAnnotationValue(int tagAnnotationIndex)`	Get the Value property of TagAnnotation.
`int`	`getTermAnnotationAnnotationCount(int termAnnotationIndex)`	Get the number of links to a TermAnnotation.
`java.lang.String`	`getTermAnnotationAnnotationRef(int termAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of TermAnnotation.
`java.lang.String`	`getTermAnnotationAnnotator(int termAnnotationIndex)`	Get the Annotator property of TermAnnotation.
`int`	`getTermAnnotationCount()`	Get the number of TermAnnotation elements.
`java.lang.String`	`getTermAnnotationDescription(int termAnnotationIndex)`	Get the Description property of TermAnnotation.
`java.lang.String`	`getTermAnnotationID(int termAnnotationIndex)`	Get the ID property of TermAnnotation.
`java.lang.String`	`getTermAnnotationNamespace(int termAnnotationIndex)`	Get the Namespace property of TermAnnotation.
`java.lang.String`	`getTermAnnotationValue(int termAnnotationIndex)`	Get the Value property of TermAnnotation.
`int`	`getTiffDataCount(int imageIndex)`	Get the number of TiffData elements.
`NonNegativeInteger`	`getTiffDataFirstC(int imageIndex, int tiffDataIndex)`	Get the FirstC property of TiffData.
`NonNegativeInteger`	`getTiffDataFirstT(int imageIndex, int tiffDataIndex)`	Get the FirstT property of TiffData.
`NonNegativeInteger`	`getTiffDataFirstZ(int imageIndex, int tiffDataIndex)`	Get the FirstZ property of TiffData.
`NonNegativeInteger`	`getTiffDataIFD(int imageIndex, int tiffDataIndex)`	Get the IFD property of TiffData.
`NonNegativeInteger`	`getTiffDataPlaneCount(int imageIndex, int tiffDataIndex)`	Get the PlaneCount property of TiffData.
`int`	`getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)`	Get the number of links to a TimestampAnnotation.
`java.lang.String`	`getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of TimestampAnnotation.
`java.lang.String`	`getTimestampAnnotationAnnotator(int timestampAnnotationIndex)`	Get the Annotator property of TimestampAnnotation.
`int`	`getTimestampAnnotationCount()`	Get the number of TimestampAnnotation elements.
`java.lang.String`	`getTimestampAnnotationDescription(int timestampAnnotationIndex)`	Get the Description property of TimestampAnnotation.
`java.lang.String`	`getTimestampAnnotationID(int timestampAnnotationIndex)`	Get the ID property of TimestampAnnotation.
`java.lang.String`	`getTimestampAnnotationNamespace(int timestampAnnotationIndex)`	Get the Namespace property of TimestampAnnotation.
`Timestamp`	`getTimestampAnnotationValue(int timestampAnnotationIndex)`	Get the Value property of TimestampAnnotation.
`Length`	`getTransmittanceRangeCutIn(int instrumentIndex, int filterIndex)`	Get the CutIn property of TransmittanceRange.
`Length`	`getTransmittanceRangeCutInTolerance(int instrumentIndex, int filterIndex)`	Get the CutInTolerance property of TransmittanceRange.
`Length`	`getTransmittanceRangeCutOut(int instrumentIndex, int filterIndex)`	Get the CutOut property of TransmittanceRange.
`Length`	`getTransmittanceRangeCutOutTolerance(int instrumentIndex, int filterIndex)`	Get the CutOutTolerance property of TransmittanceRange.
`PercentFraction`	`getTransmittanceRangeTransmittance(int instrumentIndex, int filterIndex)`	Get the Transmittance property of TransmittanceRange.
`java.lang.String`	`getUUID()`	Gets the UUID associated with this collection of metadata.
`java.lang.String`	`getUUIDFileName(int imageIndex, int tiffDataIndex)`	Get the FileName property of UUID.
`java.lang.String`	`getUUIDValue(int imageIndex, int tiffDataIndex)`	Get the text value of UUID.
`java.lang.String`	`getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex)`	Get the AnnotationRef property of Well.
`int`	`getWellAnnotationRefCount(int plateIndex, int wellIndex)`	Get the number of AnnotationRef elements in Well.
`Color`	`getWellColor(int plateIndex, int wellIndex)`	Get the Color property of Well.
`NonNegativeInteger`	`getWellColumn(int plateIndex, int wellIndex)`	Get the Column property of Well.
`int`	`getWellCount(int plateIndex)`	Get the number of Well elements.
`java.lang.String`	`getWellExternalDescription(int plateIndex, int wellIndex)`	Get the ExternalDescription property of Well.
`java.lang.String`	`getWellExternalIdentifier(int plateIndex, int wellIndex)`	Get the ExternalIdentifier property of Well.
`java.lang.String`	`getWellID(int plateIndex, int wellIndex)`	Get the ID property of Well.
`java.lang.String`	`getWellReagentRef(int plateIndex, int wellIndex)`	Get the ReagentRef property of Well.
`NonNegativeInteger`	`getWellRow(int plateIndex, int wellIndex)`	Get the Row property of Well.
`int`	`getWellSampleCount(int plateIndex, int wellIndex)`	Get the number of WellSample elements.
`java.lang.String`	`getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex)`	Get the ID property of WellSample.
`java.lang.String`	`getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex)`	Get the ImageRef property of WellSample.
`NonNegativeInteger`	`getWellSampleIndex(int plateIndex, int wellIndex, int wellSampleIndex)`	Get the Index property of WellSample.
`Length`	`getWellSamplePositionX(int plateIndex, int wellIndex, int wellSampleIndex)`	Get the PositionX property of WellSample.
`Length`	`getWellSamplePositionY(int plateIndex, int wellIndex, int wellSampleIndex)`	Get the PositionY property of WellSample.
`int`	`getWellSampleRefCount(int plateIndex, int plateAcquisitionIndex)`	Get the number of WellSampleRef elements.
`Timestamp`	`getWellSampleTimepoint(int plateIndex, int wellIndex, int wellSampleIndex)`	Get the Timepoint property of WellSample.
`java.lang.String`	`getWellType(int plateIndex, int wellIndex)`	Get the Type property of Well.
`int`	`getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)`	Get the number of links to an XMLAnnotation.
`java.lang.String`	`getXMLAnnotationAnnotationRef(int XMLAnnotationIndex, int annotationRefIndex)`	Get the AnnotationRef property of XMLAnnotation.
`java.lang.String`	`getXMLAnnotationAnnotator(int XMLAnnotationIndex)`	Get the Annotator property of XMLAnnotation.
`int`	`getXMLAnnotationCount()`	Get the number of XMLAnnotation elements.
`java.lang.String`	`getXMLAnnotationDescription(int XMLAnnotationIndex)`	Get the Description property of XMLAnnotation.
`java.lang.String`	`getXMLAnnotationID(int XMLAnnotationIndex)`	Get the ID property of XMLAnnotation.
`java.lang.String`	`getXMLAnnotationNamespace(int XMLAnnotationIndex)`	Get the Namespace property of XMLAnnotation.
`java.lang.String`	`getXMLAnnotationValue(int XMLAnnotationIndex)`	Get the Value property of XMLAnnotation.
`void`	`setArcAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Set the AnnotationRef property of Arc.
`void`	`setArcID(java.lang.String id, int instrumentIndex, int lightSourceIndex)`	Set the ID property of Arc.
`void`	`setArcLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)`	Set the LotNumber property of Arc.
`void`	`setArcManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)`	Set the Manufacturer property of Arc.
`void`	`setArcModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)`	Set the Model property of Arc.
`void`	`setArcPower(Power power, int instrumentIndex, int lightSourceIndex)`	Set the Power property of Arc.
`void`	`setArcSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)`	Set the SerialNumber property of Arc.
`void`	`setArcType(ArcType type, int instrumentIndex, int lightSourceIndex)`	Set the Type property of Arc.
`void`	`setBinaryFileBinData(byte[] base64Binary, int fileAnnotationIndex)`	Set the Base64Binary property of BinData.
`void`	`setBinaryFileBinDataBigEndian(java.lang.Boolean bigEndian, int fileAnnotationIndex)`	Set the BigEndian property of BinData.
`void`	`setBinaryFileBinDataCompression(Compression compression, int fileAnnotationIndex)`	Set the Compression property of BinData.
`void`	`setBinaryFileBinDataLength(NonNegativeLong length, int fileAnnotationIndex)`	Set the Length property of BinData.
`void`	`setBinaryFileFileName(java.lang.String fileName, int fileAnnotationIndex)`	Set the FileName property of BinaryFile.
`void`	`setBinaryFileMIMEType(java.lang.String mimeType, int fileAnnotationIndex)`	Set the MIMEType property of BinaryFile.
`void`	`setBinaryFileSize(NonNegativeLong size, int fileAnnotationIndex)`	Set the Size property of BinaryFile.
`void`	`setBinaryOnlyMetadataFile(java.lang.String metadataFile)`	Set the MetadataFile property of BinaryOnly.
`void`	`setBinaryOnlyUUID(java.lang.String uuid)`	Set the UUID property of BinaryOnly.
`void`	`setBooleanAnnotationAnnotationRef(java.lang.String annotation, int booleanAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of BooleanAnnotation.
`void`	`setBooleanAnnotationAnnotator(java.lang.String annotator, int booleanAnnotationIndex)`	Set the Annotator property of BooleanAnnotation.
`void`	`setBooleanAnnotationDescription(java.lang.String description, int booleanAnnotationIndex)`	Set the Description property of BooleanAnnotation.
`void`	`setBooleanAnnotationID(java.lang.String id, int booleanAnnotationIndex)`	Set the ID property of BooleanAnnotation.
`void`	`setBooleanAnnotationNamespace(java.lang.String namespace, int booleanAnnotationIndex)`	Set the Namespace property of BooleanAnnotation.
`void`	`setBooleanAnnotationValue(java.lang.Boolean value, int booleanAnnotationIndex)`	Set the Value property of BooleanAnnotation.
`void`	`setChannelAcquisitionMode(AcquisitionMode acquisitionMode, int imageIndex, int channelIndex)`	Set the AcquisitionMode property of Channel.
`void`	`setChannelAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)`	Set the AnnotationRef property of Channel.
`void`	`setChannelColor(Color color, int imageIndex, int channelIndex)`	Set the Color property of Channel.
`void`	`setChannelContrastMethod(ContrastMethod contrastMethod, int imageIndex, int channelIndex)`	Set the ContrastMethod property of Channel.
`void`	`setChannelEmissionWavelength(Length emissionWavelength, int imageIndex, int channelIndex)`	Set the EmissionWavelength property of Channel.
`void`	`setChannelExcitationWavelength(Length excitationWavelength, int imageIndex, int channelIndex)`	Set the ExcitationWavelength property of Channel.
`void`	`setChannelFilterSetRef(java.lang.String filterSet, int imageIndex, int channelIndex)`	Set the FilterSetRef property of Channel.
`void`	`setChannelFluor(java.lang.String fluor, int imageIndex, int channelIndex)`	Set the Fluor property of Channel.
`void`	`setChannelID(java.lang.String id, int imageIndex, int channelIndex)`	Set the ID property of Channel.
`void`	`setChannelIlluminationType(IlluminationType illuminationType, int imageIndex, int channelIndex)`	Set the IlluminationType property of Channel.
`void`	`setChannelLightSourceSettingsAttenuation(PercentFraction attenuation, int imageIndex, int channelIndex)`	Set the Attenuation property of LightSourceSettings.
`void`	`setChannelLightSourceSettingsID(java.lang.String id, int imageIndex, int channelIndex)`	Set the ID property of LightSourceSettings.
`void`	`setChannelLightSourceSettingsWavelength(Length wavelength, int imageIndex, int channelIndex)`	Set the Wavelength property of LightSourceSettings.
`void`	`setChannelName(java.lang.String name, int imageIndex, int channelIndex)`	Set the Name property of Channel.
`void`	`setChannelNDFilter(java.lang.Double ndFilter, int imageIndex, int channelIndex)`	Set the NDFilter property of Channel.
`void`	`setChannelPinholeSize(Length pinholeSize, int imageIndex, int channelIndex)`	Set the PinholeSize property of Channel.
`void`	`setChannelPockelCellSetting(java.lang.Integer pockelCellSetting, int imageIndex, int channelIndex)`	Set the PockelCellSetting property of Channel.
`void`	`setChannelSamplesPerPixel(PositiveInteger samplesPerPixel, int imageIndex, int channelIndex)`	Set the SamplesPerPixel property of Channel.
`void`	`setCommentAnnotationAnnotationRef(java.lang.String annotation, int commentAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of CommentAnnotation.
`void`	`setCommentAnnotationAnnotator(java.lang.String annotator, int commentAnnotationIndex)`	Set the Annotator property of CommentAnnotation.
`void`	`setCommentAnnotationDescription(java.lang.String description, int commentAnnotationIndex)`	Set the Description property of CommentAnnotation.
`void`	`setCommentAnnotationID(java.lang.String id, int commentAnnotationIndex)`	Set the ID property of CommentAnnotation.
`void`	`setCommentAnnotationNamespace(java.lang.String namespace, int commentAnnotationIndex)`	Set the Namespace property of CommentAnnotation.
`void`	`setCommentAnnotationValue(java.lang.String value, int commentAnnotationIndex)`	Set the Value property of CommentAnnotation.
`void`	`setCreator(java.lang.String creator)`	Sets the Creator associated with this collection of metadata.
`void`	`setDatasetAnnotationRef(java.lang.String annotation, int datasetIndex, int annotationRefIndex)`	Set the AnnotationRef property of Dataset.
`void`	`setDatasetDescription(java.lang.String description, int datasetIndex)`	Set the Description property of Dataset.
`void`	`setDatasetExperimenterGroupRef(java.lang.String experimenterGroup, int datasetIndex)`	Set the ExperimenterGroupRef property of Dataset.
`void`	`setDatasetExperimenterRef(java.lang.String experimenter, int datasetIndex)`	Set the ExperimenterRef property of Dataset.
`void`	`setDatasetID(java.lang.String id, int datasetIndex)`	Set the ID property of Dataset.
`void`	`setDatasetImageRef(java.lang.String image, int datasetIndex, int imageRefIndex)`	Set the ImageRef property of Dataset.
`void`	`setDatasetName(java.lang.String name, int datasetIndex)`	Set the Name property of Dataset.
`void`	`setDetectorAmplificationGain(java.lang.Double amplificationGain, int instrumentIndex, int detectorIndex)`	Set the AmplificationGain property of Detector.
`void`	`setDetectorAnnotationRef(java.lang.String annotation, int instrumentIndex, int detectorIndex, int annotationRefIndex)`	Set the AnnotationRef property of Detector.
`void`	`setDetectorGain(java.lang.Double gain, int instrumentIndex, int detectorIndex)`	Set the Gain property of Detector.
`void`	`setDetectorID(java.lang.String id, int instrumentIndex, int detectorIndex)`	Set the ID property of Detector.
`void`	`setDetectorLotNumber(java.lang.String lotNumber, int instrumentIndex, int detectorIndex)`	Set the LotNumber property of Detector.
`void`	`setDetectorManufacturer(java.lang.String manufacturer, int instrumentIndex, int detectorIndex)`	Set the Manufacturer property of Detector.
`void`	`setDetectorModel(java.lang.String model, int instrumentIndex, int detectorIndex)`	Set the Model property of Detector.
`void`	`setDetectorOffset(java.lang.Double offset, int instrumentIndex, int detectorIndex)`	Set the Offset property of Detector.
`void`	`setDetectorSerialNumber(java.lang.String serialNumber, int instrumentIndex, int detectorIndex)`	Set the SerialNumber property of Detector.
`void`	`setDetectorSettingsBinning(Binning binning, int imageIndex, int channelIndex)`	Set the Binning property of DetectorSettings.
`void`	`setDetectorSettingsGain(java.lang.Double gain, int imageIndex, int channelIndex)`	Set the Gain property of DetectorSettings.
`void`	`setDetectorSettingsID(java.lang.String id, int imageIndex, int channelIndex)`	Set the ID property of DetectorSettings.
`void`	`setDetectorSettingsIntegration(PositiveInteger integration, int imageIndex, int channelIndex)`	Set the Integration property of DetectorSettings.
`void`	`setDetectorSettingsOffset(java.lang.Double offset, int imageIndex, int channelIndex)`	Set the Offset property of DetectorSettings.
`void`	`setDetectorSettingsReadOutRate(Frequency readOutRate, int imageIndex, int channelIndex)`	Set the ReadOutRate property of DetectorSettings.
`void`	`setDetectorSettingsVoltage(ElectricPotential voltage, int imageIndex, int channelIndex)`	Set the Voltage property of DetectorSettings.
`void`	`setDetectorSettingsZoom(java.lang.Double zoom, int imageIndex, int channelIndex)`	Set the Zoom property of DetectorSettings.
`void`	`setDetectorType(DetectorType type, int instrumentIndex, int detectorIndex)`	Set the Type property of Detector.
`void`	`setDetectorVoltage(ElectricPotential voltage, int instrumentIndex, int detectorIndex)`	Set the Voltage property of Detector.
`void`	`setDetectorZoom(java.lang.Double zoom, int instrumentIndex, int detectorIndex)`	Set the Zoom property of Detector.
`void`	`setDichroicAnnotationRef(java.lang.String annotation, int instrumentIndex, int dichroicIndex, int annotationRefIndex)`	Set the AnnotationRef property of Dichroic.
`void`	`setDichroicID(java.lang.String id, int instrumentIndex, int dichroicIndex)`	Set the ID property of Dichroic.
`void`	`setDichroicLotNumber(java.lang.String lotNumber, int instrumentIndex, int dichroicIndex)`	Set the LotNumber property of Dichroic.
`void`	`setDichroicManufacturer(java.lang.String manufacturer, int instrumentIndex, int dichroicIndex)`	Set the Manufacturer property of Dichroic.
`void`	`setDichroicModel(java.lang.String model, int instrumentIndex, int dichroicIndex)`	Set the Model property of Dichroic.
`void`	`setDichroicSerialNumber(java.lang.String serialNumber, int instrumentIndex, int dichroicIndex)`	Set the SerialNumber property of Dichroic.
`void`	`setDoubleAnnotationAnnotationRef(java.lang.String annotation, int doubleAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of DoubleAnnotation.
`void`	`setDoubleAnnotationAnnotator(java.lang.String annotator, int doubleAnnotationIndex)`	Set the Annotator property of DoubleAnnotation.
`void`	`setDoubleAnnotationDescription(java.lang.String description, int doubleAnnotationIndex)`	Set the Description property of DoubleAnnotation.
`void`	`setDoubleAnnotationID(java.lang.String id, int doubleAnnotationIndex)`	Set the ID property of DoubleAnnotation.
`void`	`setDoubleAnnotationNamespace(java.lang.String namespace, int doubleAnnotationIndex)`	Set the Namespace property of DoubleAnnotation.
`void`	`setDoubleAnnotationValue(java.lang.Double value, int doubleAnnotationIndex)`	Set the Value property of DoubleAnnotation.
`void`	`setEllipseAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Ellipse.
`void`	`setEllipseFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Ellipse.
`void`	`setEllipseFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Ellipse.
`void`	`setEllipseFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Ellipse.
`void`	`setEllipseFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Ellipse.
`void`	`setEllipseFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Ellipse.
`void`	`setEllipseID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Ellipse.
`void`	`setEllipseLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Ellipse.
`void`	`setEllipseRadiusX(java.lang.Double radiusX, int ROIIndex, int shapeIndex)`	Set the RadiusX property of Ellipse.
`void`	`setEllipseRadiusY(java.lang.Double radiusY, int ROIIndex, int shapeIndex)`	Set the RadiusY property of Ellipse.
`void`	`setEllipseStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Ellipse.
`void`	`setEllipseStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Ellipse.
`void`	`setEllipseStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Ellipse.
`void`	`setEllipseText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Ellipse.
`void`	`setEllipseTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Ellipse.
`void`	`setEllipseTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Ellipse.
`void`	`setEllipseTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Ellipse.
`void`	`setEllipseTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Ellipse.
`void`	`setEllipseX(java.lang.Double x, int ROIIndex, int shapeIndex)`	Set the X property of Ellipse.
`void`	`setEllipseY(java.lang.Double y, int ROIIndex, int shapeIndex)`	Set the Y property of Ellipse.
`void`	`setExperimentDescription(java.lang.String description, int experimentIndex)`	Set the Description property of Experiment.
`void`	`setExperimenterAnnotationRef(java.lang.String annotation, int experimenterIndex, int annotationRefIndex)`	Set the AnnotationRef property of Experimenter.
`void`	`setExperimenterEmail(java.lang.String email, int experimenterIndex)`	Set the Email property of Experimenter.
`void`	`setExperimenterFirstName(java.lang.String firstName, int experimenterIndex)`	Set the FirstName property of Experimenter.
`void`	`setExperimenterGroupAnnotationRef(java.lang.String annotation, int experimenterGroupIndex, int annotationRefIndex)`	Set the AnnotationRef property of ExperimenterGroup.
`void`	`setExperimenterGroupDescription(java.lang.String description, int experimenterGroupIndex)`	Set the Description property of ExperimenterGroup.
`void`	`setExperimenterGroupExperimenterRef(java.lang.String experimenter, int experimenterGroupIndex, int experimenterRefIndex)`	Set the ExperimenterRef property of ExperimenterGroup.
`void`	`setExperimenterGroupID(java.lang.String id, int experimenterGroupIndex)`	Set the ID property of ExperimenterGroup.
`void`	`setExperimenterGroupLeader(java.lang.String leader, int experimenterGroupIndex, int leaderIndex)`	Set the Leader property of ExperimenterGroup.
`void`	`setExperimenterGroupName(java.lang.String name, int experimenterGroupIndex)`	Set the Name property of ExperimenterGroup.
`void`	`setExperimenterID(java.lang.String id, int experimenterIndex)`	Set the ID property of Experimenter.
`void`	`setExperimenterInstitution(java.lang.String institution, int experimenterIndex)`	Set the Institution property of Experimenter.
`void`	`setExperimenterLastName(java.lang.String lastName, int experimenterIndex)`	Set the LastName property of Experimenter.
`void`	`setExperimenterMiddleName(java.lang.String middleName, int experimenterIndex)`	Set the MiddleName property of Experimenter.
`void`	`setExperimenterUserName(java.lang.String userName, int experimenterIndex)`	Set the UserName property of Experimenter.
`void`	`setExperimentExperimenterRef(java.lang.String experimenter, int experimentIndex)`	Set the ExperimenterRef property of Experiment.
`void`	`setExperimentID(java.lang.String id, int experimentIndex)`	Set the ID property of Experiment.
`void`	`setExperimentType(ExperimentType type, int experimentIndex)`	Set the Type property of Experiment.
`void`	`setFilamentAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Set the AnnotationRef property of Filament.
`void`	`setFilamentID(java.lang.String id, int instrumentIndex, int lightSourceIndex)`	Set the ID property of Filament.
`void`	`setFilamentLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)`	Set the LotNumber property of Filament.
`void`	`setFilamentManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)`	Set the Manufacturer property of Filament.
`void`	`setFilamentModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)`	Set the Model property of Filament.
`void`	`setFilamentPower(Power power, int instrumentIndex, int lightSourceIndex)`	Set the Power property of Filament.
`void`	`setFilamentSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)`	Set the SerialNumber property of Filament.
`void`	`setFilamentType(FilamentType type, int instrumentIndex, int lightSourceIndex)`	Set the Type property of Filament.
`void`	`setFileAnnotationAnnotationRef(java.lang.String annotation, int fileAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of FileAnnotation.
`void`	`setFileAnnotationAnnotator(java.lang.String annotator, int fileAnnotationIndex)`	Set the Annotator property of FileAnnotation.
`void`	`setFileAnnotationDescription(java.lang.String description, int fileAnnotationIndex)`	Set the Description property of FileAnnotation.
`void`	`setFileAnnotationID(java.lang.String id, int fileAnnotationIndex)`	Set the ID property of FileAnnotation.
`void`	`setFileAnnotationNamespace(java.lang.String namespace, int fileAnnotationIndex)`	Set the Namespace property of FileAnnotation.
`void`	`setFilterAnnotationRef(java.lang.String annotation, int instrumentIndex, int filterIndex, int annotationRefIndex)`	Set the AnnotationRef property of Filter.
`void`	`setFilterFilterWheel(java.lang.String filterWheel, int instrumentIndex, int filterIndex)`	Set the FilterWheel property of Filter.
`void`	`setFilterID(java.lang.String id, int instrumentIndex, int filterIndex)`	Set the ID property of Filter.
`void`	`setFilterLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterIndex)`	Set the LotNumber property of Filter.
`void`	`setFilterManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterIndex)`	Set the Manufacturer property of Filter.
`void`	`setFilterModel(java.lang.String model, int instrumentIndex, int filterIndex)`	Set the Model property of Filter.
`void`	`setFilterSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterIndex)`	Set the SerialNumber property of Filter.
`void`	`setFilterSetDichroicRef(java.lang.String dichroic, int instrumentIndex, int filterSetIndex)`	Set the DichroicRef property of FilterSet.
`void`	`setFilterSetEmissionFilterRef(java.lang.String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)`	Set the EmissionFilterRef property of FilterSet.
`void`	`setFilterSetExcitationFilterRef(java.lang.String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)`	Set the ExcitationFilterRef property of FilterSet.
`void`	`setFilterSetID(java.lang.String id, int instrumentIndex, int filterSetIndex)`	Set the ID property of FilterSet.
`void`	`setFilterSetLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterSetIndex)`	Set the LotNumber property of FilterSet.
`void`	`setFilterSetManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterSetIndex)`	Set the Manufacturer property of FilterSet.
`void`	`setFilterSetModel(java.lang.String model, int instrumentIndex, int filterSetIndex)`	Set the Model property of FilterSet.
`void`	`setFilterSetSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterSetIndex)`	Set the SerialNumber property of FilterSet.
`void`	`setFilterType(FilterType type, int instrumentIndex, int filterIndex)`	Set the Type property of Filter.
`void`	`setFolderAnnotationRef(java.lang.String annotation, int folderIndex, int annotationRefIndex)`	Set the AnnotationRef property of Folder.
`void`	`setFolderDescription(java.lang.String description, int folderIndex)`	Set the Description property of Folder.
`void`	`setFolderFolderRef(java.lang.String folder, int folderIndex, int folderRefIndex)`	Set the FolderRef property of Folder.
`void`	`setFolderID(java.lang.String id, int folderIndex)`	Set the ID property of Folder.
`void`	`setFolderImageRef(java.lang.String image, int folderIndex, int imageRefIndex)`	Set the ImageRef property of Folder.
`void`	`setFolderName(java.lang.String name, int folderIndex)`	Set the Name property of Folder.
`void`	`setFolderROIRef(java.lang.String roi, int folderIndex, int ROIRefIndex)`	Set the ROIRef property of Folder.
`void`	`setGenericExcitationSourceAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Set the AnnotationRef property of GenericExcitationSource.
`void`	`setGenericExcitationSourceID(java.lang.String id, int instrumentIndex, int lightSourceIndex)`	Set the ID property of GenericExcitationSource.
`void`	`setGenericExcitationSourceLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)`	Set the LotNumber property of GenericExcitationSource.
`void`	`setGenericExcitationSourceManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)`	Set the Manufacturer property of GenericExcitationSource.
`void`	`setGenericExcitationSourceMap(java.util.List<MapPair> map, int instrumentIndex, int lightSourceIndex)`	Sets the Map value associated with this generic light source
`void`	`setGenericExcitationSourceModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)`	Set the Model property of GenericExcitationSource.
`void`	`setGenericExcitationSourcePower(Power power, int instrumentIndex, int lightSourceIndex)`	Set the Power property of GenericExcitationSource.
`void`	`setGenericExcitationSourceSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)`	Set the SerialNumber property of GenericExcitationSource.
`void`	`setImageAcquisitionDate(Timestamp acquisitionDate, int imageIndex)`	Set the AcquisitionDate property of Image.
`void`	`setImageAnnotationRef(java.lang.String annotation, int imageIndex, int annotationRefIndex)`	Set the AnnotationRef property of Image.
`void`	`setImageDescription(java.lang.String description, int imageIndex)`	Set the Description property of Image.
`void`	`setImageExperimenterGroupRef(java.lang.String experimenterGroup, int imageIndex)`	Set the ExperimenterGroupRef property of Image.
`void`	`setImageExperimenterRef(java.lang.String experimenter, int imageIndex)`	Set the ExperimenterRef property of Image.
`void`	`setImageExperimentRef(java.lang.String experiment, int imageIndex)`	Set the ExperimentRef property of Image.
`void`	`setImageID(java.lang.String id, int imageIndex)`	Set the ID property of Image.
`void`	`setImageInstrumentRef(java.lang.String instrument, int imageIndex)`	Set the InstrumentRef property of Image.
`void`	`setImageMicrobeamManipulationRef(java.lang.String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex)`	Set the MicrobeamManipulationRef property of Image.
`void`	`setImageName(java.lang.String name, int imageIndex)`	Set the Name property of Image.
`void`	`setImageROIRef(java.lang.String roi, int imageIndex, int ROIRefIndex)`	Set the ROIRef property of Image.
`void`	`setImagingEnvironmentAirPressure(Pressure airPressure, int imageIndex)`	Set the AirPressure property of ImagingEnvironment.
`void`	`setImagingEnvironmentCO2Percent(PercentFraction co2Percent, int imageIndex)`	Set the CO2Percent property of ImagingEnvironment.
`void`	`setImagingEnvironmentHumidity(PercentFraction humidity, int imageIndex)`	Set the Humidity property of ImagingEnvironment.
`void`	`setImagingEnvironmentMap(java.util.List<MapPair> map, int imageIndex)`	Sets the Map value associated with this imaging environment
`void`	`setImagingEnvironmentTemperature(Temperature temperature, int imageIndex)`	Set the Temperature property of ImagingEnvironment.
`void`	`setInstrumentAnnotationRef(java.lang.String annotation, int instrumentIndex, int annotationRefIndex)`	Set the AnnotationRef property of Instrument.
`void`	`setInstrumentID(java.lang.String id, int instrumentIndex)`	Set the ID property of Instrument.
`void`	`setLabelAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Label.
`void`	`setLabelFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Label.
`void`	`setLabelFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Label.
`void`	`setLabelFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Label.
`void`	`setLabelFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Label.
`void`	`setLabelFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Label.
`void`	`setLabelID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Label.
`void`	`setLabelLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Label.
`void`	`setLabelStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Label.
`void`	`setLabelStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Label.
`void`	`setLabelStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Label.
`void`	`setLabelText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Label.
`void`	`setLabelTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Label.
`void`	`setLabelTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Label.
`void`	`setLabelTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Label.
`void`	`setLabelTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Label.
`void`	`setLabelX(java.lang.Double x, int ROIIndex, int shapeIndex)`	Set the X property of Label.
`void`	`setLabelY(java.lang.Double y, int ROIIndex, int shapeIndex)`	Set the Y property of Label.
`void`	`setLaserAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Set the AnnotationRef property of Laser.
`void`	`setLaserFrequencyMultiplication(PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex)`	Set the FrequencyMultiplication property of Laser.
`void`	`setLaserID(java.lang.String id, int instrumentIndex, int lightSourceIndex)`	Set the ID property of Laser.
`void`	`setLaserLaserMedium(LaserMedium laserMedium, int instrumentIndex, int lightSourceIndex)`	Set the LaserMedium property of Laser.
`void`	`setLaserLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)`	Set the LotNumber property of Laser.
`void`	`setLaserManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)`	Set the Manufacturer property of Laser.
`void`	`setLaserModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)`	Set the Model property of Laser.
`void`	`setLaserPockelCell(java.lang.Boolean pockelCell, int instrumentIndex, int lightSourceIndex)`	Set the PockelCell property of Laser.
`void`	`setLaserPower(Power power, int instrumentIndex, int lightSourceIndex)`	Set the Power property of Laser.
`void`	`setLaserPulse(Pulse pulse, int instrumentIndex, int lightSourceIndex)`	Set the Pulse property of Laser.
`void`	`setLaserPump(java.lang.String pump, int instrumentIndex, int lightSourceIndex)`	Set the Pump property of Laser.
`void`	`setLaserRepetitionRate(Frequency repetitionRate, int instrumentIndex, int lightSourceIndex)`	Set the RepetitionRate property of Laser.
`void`	`setLaserSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)`	Set the SerialNumber property of Laser.
`void`	`setLaserTuneable(java.lang.Boolean tuneable, int instrumentIndex, int lightSourceIndex)`	Set the Tuneable property of Laser.
`void`	`setLaserType(LaserType type, int instrumentIndex, int lightSourceIndex)`	Set the Type property of Laser.
`void`	`setLaserWavelength(Length wavelength, int instrumentIndex, int lightSourceIndex)`	Set the Wavelength property of Laser.
`void`	`setLightEmittingDiodeAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)`	Set the AnnotationRef property of LightEmittingDiode.
`void`	`setLightEmittingDiodeID(java.lang.String id, int instrumentIndex, int lightSourceIndex)`	Set the ID property of LightEmittingDiode.
`void`	`setLightEmittingDiodeLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)`	Set the LotNumber property of LightEmittingDiode.
`void`	`setLightEmittingDiodeManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)`	Set the Manufacturer property of LightEmittingDiode.
`void`	`setLightEmittingDiodeModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)`	Set the Model property of LightEmittingDiode.
`void`	`setLightEmittingDiodePower(Power power, int instrumentIndex, int lightSourceIndex)`	Set the Power property of LightEmittingDiode.
`void`	`setLightEmittingDiodeSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)`	Set the SerialNumber property of LightEmittingDiode.
`void`	`setLightPathAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)`	Set the AnnotationRef property of LightPath.
`void`	`setLightPathDichroicRef(java.lang.String dichroic, int imageIndex, int channelIndex)`	Set the DichroicRef property of LightPath.
`void`	`setLightPathEmissionFilterRef(java.lang.String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex)`	Set the EmissionFilterRef property of LightPath.
`void`	`setLightPathExcitationFilterRef(java.lang.String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex)`	Set the ExcitationFilterRef property of LightPath.
`void`	`setLineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Line.
`void`	`setLineFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Line.
`void`	`setLineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Line.
`void`	`setLineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Line.
`void`	`setLineFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Line.
`void`	`setLineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Line.
`void`	`setLineID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Line.
`void`	`setLineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Line.
`void`	`setLineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex)`	Set the MarkerEnd property of Line.
`void`	`setLineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex)`	Set the MarkerStart property of Line.
`void`	`setLineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Line.
`void`	`setLineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Line.
`void`	`setLineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Line.
`void`	`setLineText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Line.
`void`	`setLineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Line.
`void`	`setLineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Line.
`void`	`setLineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Line.
`void`	`setLineTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Line.
`void`	`setLineX1(java.lang.Double x1, int ROIIndex, int shapeIndex)`	Set the X1 property of Line.
`void`	`setLineX2(java.lang.Double x2, int ROIIndex, int shapeIndex)`	Set the X2 property of Line.
`void`	`setLineY1(java.lang.Double y1, int ROIIndex, int shapeIndex)`	Set the Y1 property of Line.
`void`	`setLineY2(java.lang.Double y2, int ROIIndex, int shapeIndex)`	Set the Y2 property of Line.
`void`	`setListAnnotationAnnotationRef(java.lang.String annotation, int listAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of ListAnnotation.
`void`	`setListAnnotationAnnotator(java.lang.String annotator, int listAnnotationIndex)`	Set the Annotator property of ListAnnotation.
`void`	`setListAnnotationDescription(java.lang.String description, int listAnnotationIndex)`	Set the Description property of ListAnnotation.
`void`	`setListAnnotationID(java.lang.String id, int listAnnotationIndex)`	Set the ID property of ListAnnotation.
`void`	`setListAnnotationNamespace(java.lang.String namespace, int listAnnotationIndex)`	Set the Namespace property of ListAnnotation.
`void`	`setLongAnnotationAnnotationRef(java.lang.String annotation, int longAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of LongAnnotation.
`void`	`setLongAnnotationAnnotator(java.lang.String annotator, int longAnnotationIndex)`	Set the Annotator property of LongAnnotation.
`void`	`setLongAnnotationDescription(java.lang.String description, int longAnnotationIndex)`	Set the Description property of LongAnnotation.
`void`	`setLongAnnotationID(java.lang.String id, int longAnnotationIndex)`	Set the ID property of LongAnnotation.
`void`	`setLongAnnotationNamespace(java.lang.String namespace, int longAnnotationIndex)`	Set the Namespace property of LongAnnotation.
`void`	`setLongAnnotationValue(java.lang.Long value, int longAnnotationIndex)`	Set the Value property of LongAnnotation.
`void`	`setMapAnnotationAnnotationRef(java.lang.String annotation, int mapAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of MapAnnotation.
`void`	`setMapAnnotationAnnotator(java.lang.String annotator, int mapAnnotationIndex)`	Set the Annotator property of MapAnnotation.
`void`	`setMapAnnotationDescription(java.lang.String description, int mapAnnotationIndex)`	Set the Description property of MapAnnotation.
`void`	`setMapAnnotationID(java.lang.String id, int mapAnnotationIndex)`	Set the ID property of MapAnnotation.
`void`	`setMapAnnotationNamespace(java.lang.String namespace, int mapAnnotationIndex)`	Set the Namespace property of MapAnnotation.
`void`	`setMapAnnotationValue(java.util.List<MapPair> value, int mapAnnotationIndex)`	Sets the Map value associated with this annotation
`void`	`setMaskAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Mask.
`void`	`setMaskBinData(byte[] base64Binary, int ROIIndex, int shapeIndex)`	Set the Base64Binary property of BinData.
`void`	`setMaskBinDataBigEndian(java.lang.Boolean bigEndian, int ROIIndex, int shapeIndex)`	Set the BigEndian property of BinData.
`void`	`setMaskBinDataCompression(Compression compression, int ROIIndex, int shapeIndex)`	Set the Compression property of BinData.
`void`	`setMaskBinDataLength(NonNegativeLong length, int ROIIndex, int shapeIndex)`	Set the Length property of BinData.
`void`	`setMaskFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Mask.
`void`	`setMaskFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Mask.
`void`	`setMaskFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Mask.
`void`	`setMaskFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Mask.
`void`	`setMaskFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Mask.
`void`	`setMaskHeight(java.lang.Double height, int ROIIndex, int shapeIndex)`	Set the Height property of Mask.
`void`	`setMaskID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Mask.
`void`	`setMaskLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Mask.
`void`	`setMaskStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Mask.
`void`	`setMaskStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Mask.
`void`	`setMaskStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Mask.
`void`	`setMaskText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Mask.
`void`	`setMaskTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Mask.
`void`	`setMaskTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Mask.
`void`	`setMaskTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Mask.
`void`	`setMaskTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Mask.
`void`	`setMaskWidth(java.lang.Double width, int ROIIndex, int shapeIndex)`	Set the Width property of Mask.
`void`	`setMaskX(java.lang.Double x, int ROIIndex, int shapeIndex)`	Set the X property of Mask.
`void`	`setMaskY(java.lang.Double y, int ROIIndex, int shapeIndex)`	Set the Y property of Mask.
`void`	`setMicrobeamManipulationDescription(java.lang.String description, int experimentIndex, int microbeamManipulationIndex)`	Set the Description property of MicrobeamManipulation.
`void`	`setMicrobeamManipulationExperimenterRef(java.lang.String experimenter, int experimentIndex, int microbeamManipulationIndex)`	Set the ExperimenterRef property of MicrobeamManipulation.
`void`	`setMicrobeamManipulationID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex)`	Set the ID property of MicrobeamManipulation.
`void`	`setMicrobeamManipulationLightSourceSettingsAttenuation(PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`	Set the Attenuation property of LightSourceSettings.
`void`	`setMicrobeamManipulationLightSourceSettingsID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`	Set the ID property of LightSourceSettings.
`void`	`setMicrobeamManipulationLightSourceSettingsWavelength(Length wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)`	Set the Wavelength property of LightSourceSettings.
`void`	`setMicrobeamManipulationROIRef(java.lang.String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)`	Set the ROIRef property of MicrobeamManipulation.
`void`	`setMicrobeamManipulationType(MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex)`	Set the Type property of MicrobeamManipulation.
`void`	`setMicroscopeLotNumber(java.lang.String lotNumber, int instrumentIndex)`	Set the LotNumber property of Microscope.
`void`	`setMicroscopeManufacturer(java.lang.String manufacturer, int instrumentIndex)`	Set the Manufacturer property of Microscope.
`void`	`setMicroscopeModel(java.lang.String model, int instrumentIndex)`	Set the Model property of Microscope.
`void`	`setMicroscopeSerialNumber(java.lang.String serialNumber, int instrumentIndex)`	Set the SerialNumber property of Microscope.
`void`	`setMicroscopeType(MicroscopeType type, int instrumentIndex)`	Set the Type property of Microscope.
`void`	`setObjectiveAnnotationRef(java.lang.String annotation, int instrumentIndex, int objectiveIndex, int annotationRefIndex)`	Set the AnnotationRef property of Objective.
`void`	`setObjectiveCalibratedMagnification(java.lang.Double calibratedMagnification, int instrumentIndex, int objectiveIndex)`	Set the CalibratedMagnification property of Objective.
`void`	`setObjectiveCorrection(Correction correction, int instrumentIndex, int objectiveIndex)`	Set the Correction property of Objective.
`void`	`setObjectiveID(java.lang.String id, int instrumentIndex, int objectiveIndex)`	Set the ID property of Objective.
`void`	`setObjectiveImmersion(Immersion immersion, int instrumentIndex, int objectiveIndex)`	Set the Immersion property of Objective.
`void`	`setObjectiveIris(java.lang.Boolean iris, int instrumentIndex, int objectiveIndex)`	Set the Iris property of Objective.
`void`	`setObjectiveLensNA(java.lang.Double lensNA, int instrumentIndex, int objectiveIndex)`	Set the LensNA property of Objective.
`void`	`setObjectiveLotNumber(java.lang.String lotNumber, int instrumentIndex, int objectiveIndex)`	Set the LotNumber property of Objective.
`void`	`setObjectiveManufacturer(java.lang.String manufacturer, int instrumentIndex, int objectiveIndex)`	Set the Manufacturer property of Objective.
`void`	`setObjectiveModel(java.lang.String model, int instrumentIndex, int objectiveIndex)`	Set the Model property of Objective.
`void`	`setObjectiveNominalMagnification(java.lang.Double nominalMagnification, int instrumentIndex, int objectiveIndex)`	Set the NominalMagnification property of Objective.
`void`	`setObjectiveSerialNumber(java.lang.String serialNumber, int instrumentIndex, int objectiveIndex)`	Set the SerialNumber property of Objective.
`void`	`setObjectiveSettingsCorrectionCollar(java.lang.Double correctionCollar, int imageIndex)`	Set the CorrectionCollar property of ObjectiveSettings.
`void`	`setObjectiveSettingsID(java.lang.String id, int imageIndex)`	Set the ID property of ObjectiveSettings.
`void`	`setObjectiveSettingsMedium(Medium medium, int imageIndex)`	Set the Medium property of ObjectiveSettings.
`void`	`setObjectiveSettingsRefractiveIndex(java.lang.Double refractiveIndex, int imageIndex)`	Set the RefractiveIndex property of ObjectiveSettings.
`void`	`setObjectiveWorkingDistance(Length workingDistance, int instrumentIndex, int objectiveIndex)`	Set the WorkingDistance property of Objective.
`void`	`setPixelsBigEndian(java.lang.Boolean bigEndian, int imageIndex)`	Set the BigEndian property of Pixels.
`void`	`setPixelsBinData(byte[] base64Binary, int imageIndex, int binDataIndex)`	Set the Base64Binary property of BinData.
`void`	`setPixelsBinDataBigEndian(java.lang.Boolean bigEndian, int imageIndex, int binDataIndex)`	Set the BigEndian property of BinData.
`void`	`setPixelsBinDataCompression(Compression compression, int imageIndex, int binDataIndex)`	Set the Compression property of BinData.
`void`	`setPixelsBinDataLength(NonNegativeLong length, int imageIndex, int binDataIndex)`	Set the Length property of BinData.
`void`	`setPixelsDimensionOrder(DimensionOrder dimensionOrder, int imageIndex)`	Set the DimensionOrder property of Pixels.
`void`	`setPixelsID(java.lang.String id, int imageIndex)`	Set the ID property of Pixels.
`void`	`setPixelsInterleaved(java.lang.Boolean interleaved, int imageIndex)`	Set the Interleaved property of Pixels.
`void`	`setPixelsPhysicalSizeX(Length physicalSizeX, int imageIndex)`	Set the PhysicalSizeX property of Pixels.
`void`	`setPixelsPhysicalSizeY(Length physicalSizeY, int imageIndex)`	Set the PhysicalSizeY property of Pixels.
`void`	`setPixelsPhysicalSizeZ(Length physicalSizeZ, int imageIndex)`	Set the PhysicalSizeZ property of Pixels.
`void`	`setPixelsSignificantBits(PositiveInteger significantBits, int imageIndex)`	Set the SignificantBits property of Pixels.
`void`	`setPixelsSizeC(PositiveInteger sizeC, int imageIndex)`	Set the SizeC property of Pixels.
`void`	`setPixelsSizeT(PositiveInteger sizeT, int imageIndex)`	Set the SizeT property of Pixels.
`void`	`setPixelsSizeX(PositiveInteger sizeX, int imageIndex)`	Set the SizeX property of Pixels.
`void`	`setPixelsSizeY(PositiveInteger sizeY, int imageIndex)`	Set the SizeY property of Pixels.
`void`	`setPixelsSizeZ(PositiveInteger sizeZ, int imageIndex)`	Set the SizeZ property of Pixels.
`void`	`setPixelsTimeIncrement(Time timeIncrement, int imageIndex)`	Set the TimeIncrement property of Pixels.
`void`	`setPixelsType(PixelType type, int imageIndex)`	Set the Type property of Pixels.
`void`	`setPlaneAnnotationRef(java.lang.String annotation, int imageIndex, int planeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Plane.
`void`	`setPlaneDeltaT(Time deltaT, int imageIndex, int planeIndex)`	Set the DeltaT property of Plane.
`void`	`setPlaneExposureTime(Time exposureTime, int imageIndex, int planeIndex)`	Set the ExposureTime property of Plane.
`void`	`setPlaneHashSHA1(java.lang.String hashSHA1, int imageIndex, int planeIndex)`	Set the HashSHA1 property of Plane.
`void`	`setPlanePositionX(Length positionX, int imageIndex, int planeIndex)`	Set the PositionX property of Plane.
`void`	`setPlanePositionY(Length positionY, int imageIndex, int planeIndex)`	Set the PositionY property of Plane.
`void`	`setPlanePositionZ(Length positionZ, int imageIndex, int planeIndex)`	Set the PositionZ property of Plane.
`void`	`setPlaneTheC(NonNegativeInteger theC, int imageIndex, int planeIndex)`	Set the TheC property of Plane.
`void`	`setPlaneTheT(NonNegativeInteger theT, int imageIndex, int planeIndex)`	Set the TheT property of Plane.
`void`	`setPlaneTheZ(NonNegativeInteger theZ, int imageIndex, int planeIndex)`	Set the TheZ property of Plane.
`void`	`setPlateAcquisitionAnnotationRef(java.lang.String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)`	Set the AnnotationRef property of PlateAcquisition.
`void`	`setPlateAcquisitionDescription(java.lang.String description, int plateIndex, int plateAcquisitionIndex)`	Set the Description property of PlateAcquisition.
`void`	`setPlateAcquisitionEndTime(Timestamp endTime, int plateIndex, int plateAcquisitionIndex)`	Set the EndTime property of PlateAcquisition.
`void`	`setPlateAcquisitionID(java.lang.String id, int plateIndex, int plateAcquisitionIndex)`	Set the ID property of PlateAcquisition.
`void`	`setPlateAcquisitionMaximumFieldCount(PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex)`	Set the MaximumFieldCount property of PlateAcquisition.
`void`	`setPlateAcquisitionName(java.lang.String name, int plateIndex, int plateAcquisitionIndex)`	Set the Name property of PlateAcquisition.
`void`	`setPlateAcquisitionStartTime(Timestamp startTime, int plateIndex, int plateAcquisitionIndex)`	Set the StartTime property of PlateAcquisition.
`void`	`setPlateAcquisitionWellSampleRef(java.lang.String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)`	Set the WellSampleRef property of PlateAcquisition.
`void`	`setPlateAnnotationRef(java.lang.String annotation, int plateIndex, int annotationRefIndex)`	Set the AnnotationRef property of Plate.
`void`	`setPlateColumnNamingConvention(NamingConvention columnNamingConvention, int plateIndex)`	Set the ColumnNamingConvention property of Plate.
`void`	`setPlateColumns(PositiveInteger columns, int plateIndex)`	Set the Columns property of Plate.
`void`	`setPlateDescription(java.lang.String description, int plateIndex)`	Set the Description property of Plate.
`void`	`setPlateExternalIdentifier(java.lang.String externalIdentifier, int plateIndex)`	Set the ExternalIdentifier property of Plate.
`void`	`setPlateFieldIndex(NonNegativeInteger fieldIndex, int plateIndex)`	Set the FieldIndex property of Plate.
`void`	`setPlateID(java.lang.String id, int plateIndex)`	Set the ID property of Plate.
`void`	`setPlateName(java.lang.String name, int plateIndex)`	Set the Name property of Plate.
`void`	`setPlateRowNamingConvention(NamingConvention rowNamingConvention, int plateIndex)`	Set the RowNamingConvention property of Plate.
`void`	`setPlateRows(PositiveInteger rows, int plateIndex)`	Set the Rows property of Plate.
`void`	`setPlateStatus(java.lang.String status, int plateIndex)`	Set the Status property of Plate.
`void`	`setPlateWellOriginX(Length wellOriginX, int plateIndex)`	Set the WellOriginX property of Plate.
`void`	`setPlateWellOriginY(Length wellOriginY, int plateIndex)`	Set the WellOriginY property of Plate.
`void`	`setPointAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Point.
`void`	`setPointFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Point.
`void`	`setPointFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Point.
`void`	`setPointFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Point.
`void`	`setPointFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Point.
`void`	`setPointFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Point.
`void`	`setPointID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Point.
`void`	`setPointLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Point.
`void`	`setPointStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Point.
`void`	`setPointStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Point.
`void`	`setPointStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Point.
`void`	`setPointText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Point.
`void`	`setPointTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Point.
`void`	`setPointTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Point.
`void`	`setPointTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Point.
`void`	`setPointTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Point.
`void`	`setPointX(java.lang.Double x, int ROIIndex, int shapeIndex)`	Set the X property of Point.
`void`	`setPointY(java.lang.Double y, int ROIIndex, int shapeIndex)`	Set the Y property of Point.
`void`	`setPolygonAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Polygon.
`void`	`setPolygonFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Polygon.
`void`	`setPolygonFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Polygon.
`void`	`setPolygonFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Polygon.
`void`	`setPolygonFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Polygon.
`void`	`setPolygonFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Polygon.
`void`	`setPolygonID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Polygon.
`void`	`setPolygonLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Polygon.
`void`	`setPolygonPoints(java.lang.String points, int ROIIndex, int shapeIndex)`	Set the Points property of Polygon.
`void`	`setPolygonStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Polygon.
`void`	`setPolygonStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Polygon.
`void`	`setPolygonStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Polygon.
`void`	`setPolygonText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Polygon.
`void`	`setPolygonTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Polygon.
`void`	`setPolygonTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Polygon.
`void`	`setPolygonTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Polygon.
`void`	`setPolygonTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Polygon.
`void`	`setPolylineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Polyline.
`void`	`setPolylineFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Polyline.
`void`	`setPolylineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Polyline.
`void`	`setPolylineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Polyline.
`void`	`setPolylineFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Polyline.
`void`	`setPolylineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Polyline.
`void`	`setPolylineID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Polyline.
`void`	`setPolylineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Polyline.
`void`	`setPolylineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex)`	Set the MarkerEnd property of Polyline.
`void`	`setPolylineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex)`	Set the MarkerStart property of Polyline.
`void`	`setPolylinePoints(java.lang.String points, int ROIIndex, int shapeIndex)`	Set the Points property of Polyline.
`void`	`setPolylineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Polyline.
`void`	`setPolylineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Polyline.
`void`	`setPolylineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Polyline.
`void`	`setPolylineText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Polyline.
`void`	`setPolylineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Polyline.
`void`	`setPolylineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Polyline.
`void`	`setPolylineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Polyline.
`void`	`setPolylineTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Polyline.
`void`	`setProjectAnnotationRef(java.lang.String annotation, int projectIndex, int annotationRefIndex)`	Set the AnnotationRef property of Project.
`void`	`setProjectDatasetRef(java.lang.String dataset, int projectIndex, int datasetRefIndex)`	Set the DatasetRef property of Project.
`void`	`setProjectDescription(java.lang.String description, int projectIndex)`	Set the Description property of Project.
`void`	`setProjectExperimenterGroupRef(java.lang.String experimenterGroup, int projectIndex)`	Set the ExperimenterGroupRef property of Project.
`void`	`setProjectExperimenterRef(java.lang.String experimenter, int projectIndex)`	Set the ExperimenterRef property of Project.
`void`	`setProjectID(java.lang.String id, int projectIndex)`	Set the ID property of Project.
`void`	`setProjectName(java.lang.String name, int projectIndex)`	Set the Name property of Project.
`void`	`setReagentAnnotationRef(java.lang.String annotation, int screenIndex, int reagentIndex, int annotationRefIndex)`	Set the AnnotationRef property of Reagent.
`void`	`setReagentDescription(java.lang.String description, int screenIndex, int reagentIndex)`	Set the Description property of Reagent.
`void`	`setReagentID(java.lang.String id, int screenIndex, int reagentIndex)`	Set the ID property of Reagent.
`void`	`setReagentName(java.lang.String name, int screenIndex, int reagentIndex)`	Set the Name property of Reagent.
`void`	`setReagentReagentIdentifier(java.lang.String reagentIdentifier, int screenIndex, int reagentIndex)`	Set the ReagentIdentifier property of Reagent.
`void`	`setRectangleAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)`	Set the AnnotationRef property of Rectangle.
`void`	`setRectangleFillColor(Color fillColor, int ROIIndex, int shapeIndex)`	Set the FillColor property of Rectangle.
`void`	`setRectangleFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)`	Set the FillRule property of Rectangle.
`void`	`setRectangleFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)`	Set the FontFamily property of Rectangle.
`void`	`setRectangleFontSize(Length fontSize, int ROIIndex, int shapeIndex)`	Set the FontSize property of Rectangle.
`void`	`setRectangleFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)`	Set the FontStyle property of Rectangle.
`void`	`setRectangleHeight(java.lang.Double height, int ROIIndex, int shapeIndex)`	Set the Height property of Rectangle.
`void`	`setRectangleID(java.lang.String id, int ROIIndex, int shapeIndex)`	Set the ID property of Rectangle.
`void`	`setRectangleLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)`	Set the Locked property of Rectangle.
`void`	`setRectangleStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)`	Set the StrokeColor property of Rectangle.
`void`	`setRectangleStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)`	Set the StrokeDashArray property of Rectangle.
`void`	`setRectangleStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)`	Set the StrokeWidth property of Rectangle.
`void`	`setRectangleText(java.lang.String text, int ROIIndex, int shapeIndex)`	Set the Text property of Rectangle.
`void`	`setRectangleTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)`	Set the TheC property of Rectangle.
`void`	`setRectangleTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)`	Set the TheT property of Rectangle.
`void`	`setRectangleTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)`	Set the TheZ property of Rectangle.
`void`	`setRectangleTransform(AffineTransform transform, int ROIIndex, int shapeIndex)`	Set the Transform property of Rectangle.
`void`	`setRectangleWidth(java.lang.Double width, int ROIIndex, int shapeIndex)`	Set the Width property of Rectangle.
`void`	`setRectangleX(java.lang.Double x, int ROIIndex, int shapeIndex)`	Set the X property of Rectangle.
`void`	`setRectangleY(java.lang.Double y, int ROIIndex, int shapeIndex)`	Set the Y property of Rectangle.
`void`	`setRightsRightsHeld(java.lang.String rightsHeld)`	Set the RightsHeld property of Rights.
`void`	`setRightsRightsHolder(java.lang.String rightsHolder)`	Set the RightsHolder property of Rights.
`void`	`setROIAnnotationRef(java.lang.String annotation, int ROIIndex, int annotationRefIndex)`	Set the AnnotationRef property of ROI.
`void`	`setROIDescription(java.lang.String description, int ROIIndex)`	Set the Description property of ROI.
`void`	`setROIID(java.lang.String id, int ROIIndex)`	Set the ID property of ROI.
`void`	`setROIName(java.lang.String name, int ROIIndex)`	Set the Name property of ROI.
`void`	`setRoot(MetadataRoot root)`	Unsupported with an AggregateMetadata.
`void`	`setScreenAnnotationRef(java.lang.String annotation, int screenIndex, int annotationRefIndex)`	Set the AnnotationRef property of Screen.
`void`	`setScreenDescription(java.lang.String description, int screenIndex)`	Set the Description property of Screen.
`void`	`setScreenID(java.lang.String id, int screenIndex)`	Set the ID property of Screen.
`void`	`setScreenName(java.lang.String name, int screenIndex)`	Set the Name property of Screen.
`void`	`setScreenPlateRef(java.lang.String plate, int screenIndex, int plateRefIndex)`	Set the PlateRef property of Screen.
`void`	`setScreenProtocolDescription(java.lang.String protocolDescription, int screenIndex)`	Set the ProtocolDescription property of Screen.
`void`	`setScreenProtocolIdentifier(java.lang.String protocolIdentifier, int screenIndex)`	Set the ProtocolIdentifier property of Screen.
`void`	`setScreenReagentSetDescription(java.lang.String reagentSetDescription, int screenIndex)`	Set the ReagentSetDescription property of Screen.
`void`	`setScreenReagentSetIdentifier(java.lang.String reagentSetIdentifier, int screenIndex)`	Set the ReagentSetIdentifier property of Screen.
`void`	`setScreenType(java.lang.String type, int screenIndex)`	Set the Type property of Screen.
`void`	`setStageLabelName(java.lang.String name, int imageIndex)`	Set the Name property of StageLabel.
`void`	`setStageLabelX(Length x, int imageIndex)`	Set the X property of StageLabel.
`void`	`setStageLabelY(Length y, int imageIndex)`	Set the Y property of StageLabel.
`void`	`setStageLabelZ(Length z, int imageIndex)`	Set the Z property of StageLabel.
`void`	`setTagAnnotationAnnotationRef(java.lang.String annotation, int tagAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of TagAnnotation.
`void`	`setTagAnnotationAnnotator(java.lang.String annotator, int tagAnnotationIndex)`	Set the Annotator property of TagAnnotation.
`void`	`setTagAnnotationDescription(java.lang.String description, int tagAnnotationIndex)`	Set the Description property of TagAnnotation.
`void`	`setTagAnnotationID(java.lang.String id, int tagAnnotationIndex)`	Set the ID property of TagAnnotation.
`void`	`setTagAnnotationNamespace(java.lang.String namespace, int tagAnnotationIndex)`	Set the Namespace property of TagAnnotation.
`void`	`setTagAnnotationValue(java.lang.String value, int tagAnnotationIndex)`	Set the Value property of TagAnnotation.
`void`	`setTermAnnotationAnnotationRef(java.lang.String annotation, int termAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of TermAnnotation.
`void`	`setTermAnnotationAnnotator(java.lang.String annotator, int termAnnotationIndex)`	Set the Annotator property of TermAnnotation.
`void`	`setTermAnnotationDescription(java.lang.String description, int termAnnotationIndex)`	Set the Description property of TermAnnotation.
`void`	`setTermAnnotationID(java.lang.String id, int termAnnotationIndex)`	Set the ID property of TermAnnotation.
`void`	`setTermAnnotationNamespace(java.lang.String namespace, int termAnnotationIndex)`	Set the Namespace property of TermAnnotation.
`void`	`setTermAnnotationValue(java.lang.String value, int termAnnotationIndex)`	Set the Value property of TermAnnotation.
`void`	`setTiffDataFirstC(NonNegativeInteger firstC, int imageIndex, int tiffDataIndex)`	Set the FirstC property of TiffData.
`void`	`setTiffDataFirstT(NonNegativeInteger firstT, int imageIndex, int tiffDataIndex)`	Set the FirstT property of TiffData.
`void`	`setTiffDataFirstZ(NonNegativeInteger firstZ, int imageIndex, int tiffDataIndex)`	Set the FirstZ property of TiffData.
`void`	`setTiffDataIFD(NonNegativeInteger ifd, int imageIndex, int tiffDataIndex)`	Set the IFD property of TiffData.
`void`	`setTiffDataPlaneCount(NonNegativeInteger planeCount, int imageIndex, int tiffDataIndex)`	Set the PlaneCount property of TiffData.
`void`	`setTimestampAnnotationAnnotationRef(java.lang.String annotation, int timestampAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of TimestampAnnotation.
`void`	`setTimestampAnnotationAnnotator(java.lang.String annotator, int timestampAnnotationIndex)`	Set the Annotator property of TimestampAnnotation.
`void`	`setTimestampAnnotationDescription(java.lang.String description, int timestampAnnotationIndex)`	Set the Description property of TimestampAnnotation.
`void`	`setTimestampAnnotationID(java.lang.String id, int timestampAnnotationIndex)`	Set the ID property of TimestampAnnotation.
`void`	`setTimestampAnnotationNamespace(java.lang.String namespace, int timestampAnnotationIndex)`	Set the Namespace property of TimestampAnnotation.
`void`	`setTimestampAnnotationValue(Timestamp value, int timestampAnnotationIndex)`	Set the Value property of TimestampAnnotation.
`void`	`setTransmittanceRangeCutIn(Length cutIn, int instrumentIndex, int filterIndex)`	Set the CutIn property of TransmittanceRange.
`void`	`setTransmittanceRangeCutInTolerance(Length cutInTolerance, int instrumentIndex, int filterIndex)`	Set the CutInTolerance property of TransmittanceRange.
`void`	`setTransmittanceRangeCutOut(Length cutOut, int instrumentIndex, int filterIndex)`	Set the CutOut property of TransmittanceRange.
`void`	`setTransmittanceRangeCutOutTolerance(Length cutOutTolerance, int instrumentIndex, int filterIndex)`	Set the CutOutTolerance property of TransmittanceRange.
`void`	`setTransmittanceRangeTransmittance(PercentFraction transmittance, int instrumentIndex, int filterIndex)`	Set the Transmittance property of TransmittanceRange.
`void`	`setUUID(java.lang.String uuid)`	Sets the UUID associated with this collection of metadata.
`void`	`setUUIDFileName(java.lang.String fileName, int imageIndex, int tiffDataIndex)`	Set the FileName property of UUID.
`void`	`setUUIDValue(java.lang.String value, int imageIndex, int tiffDataIndex)`	Set the text value of UUID.
`void`	`setWellAnnotationRef(java.lang.String annotation, int plateIndex, int wellIndex, int annotationRefIndex)`	Set the AnnotationRef property of Well.
`void`	`setWellColor(Color color, int plateIndex, int wellIndex)`	Set the Color property of Well.
`void`	`setWellColumn(NonNegativeInteger column, int plateIndex, int wellIndex)`	Set the Column property of Well.
`void`	`setWellExternalDescription(java.lang.String externalDescription, int plateIndex, int wellIndex)`	Set the ExternalDescription property of Well.
`void`	`setWellExternalIdentifier(java.lang.String externalIdentifier, int plateIndex, int wellIndex)`	Set the ExternalIdentifier property of Well.
`void`	`setWellID(java.lang.String id, int plateIndex, int wellIndex)`	Set the ID property of Well.
`void`	`setWellReagentRef(java.lang.String reagent, int plateIndex, int wellIndex)`	Set the ReagentRef property of Well.
`void`	`setWellRow(NonNegativeInteger row, int plateIndex, int wellIndex)`	Set the Row property of Well.
`void`	`setWellSampleID(java.lang.String id, int plateIndex, int wellIndex, int wellSampleIndex)`	Set the ID property of WellSample.
`void`	`setWellSampleImageRef(java.lang.String image, int plateIndex, int wellIndex, int wellSampleIndex)`	Set the ImageRef property of WellSample.
`void`	`setWellSampleIndex(NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex)`	Set the Index property of WellSample.
`void`	`setWellSamplePositionX(Length positionX, int plateIndex, int wellIndex, int wellSampleIndex)`	Set the PositionX property of WellSample.
`void`	`setWellSamplePositionY(Length positionY, int plateIndex, int wellIndex, int wellSampleIndex)`	Set the PositionY property of WellSample.
`void`	`setWellSampleTimepoint(Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex)`	Set the Timepoint property of WellSample.
`void`	`setWellType(java.lang.String type, int plateIndex, int wellIndex)`	Set the Type property of Well.
`void`	`setXMLAnnotationAnnotationRef(java.lang.String annotation, int XMLAnnotationIndex, int annotationRefIndex)`	Set the AnnotationRef property of XMLAnnotation.
`void`	`setXMLAnnotationAnnotator(java.lang.String annotator, int XMLAnnotationIndex)`	Set the Annotator property of XMLAnnotation.
`void`	`setXMLAnnotationDescription(java.lang.String description, int XMLAnnotationIndex)`	Set the Description property of XMLAnnotation.
`void`	`setXMLAnnotationID(java.lang.String id, int XMLAnnotationIndex)`	Set the ID property of XMLAnnotation.
`void`	`setXMLAnnotationNamespace(java.lang.String namespace, int XMLAnnotationIndex)`	Set the Namespace property of XMLAnnotation.
`void`	`setXMLAnnotationValue(java.lang.String value, int XMLAnnotationIndex)`	Set the Value property of XMLAnnotation.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- AggregateMetadata
  
  public AggregateMetadata(java.util.List<BaseMetadata> delegates)
  
  Creates a new instance.
  
  Parameters:
  
  delegates - of type MetadataRetrieve and/or MetadataStore.
Method Details
- createRoot
  
  public void createRoot()
  
  Description copied from interface: MetadataStore
  
  Create root node. The action taken here is specific to the concrete metadata implementation.
  
  Specified by:
  
  createRoot in interface MetadataStore
- getRoot
  
  public MetadataRoot getRoot()
  
  Unsupported with an AggregateMetadata.
  
  Specified by:
  
  getRoot in interface MetadataStore
  
  Returns:
  
  the root node.
  
  Throws:
  
  java.lang.RuntimeException - Always.
- setRoot
  
  public void setRoot(MetadataRoot root)
  
  Unsupported with an AggregateMetadata.
  
  Specified by:
  
  setRoot in interface MetadataStore
  
  Parameters:
  
  root - the root node.
  
  Throws:
  
  java.lang.RuntimeException - Always.
- getBooleanAnnotationAnnotationCount
  
  public int getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a BooleanAnnotation. This method returns the number of references to the specified BooleanAnnotation held by all model objects.
  
  Specified by:
  
  getBooleanAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  Returns:
  
  the number of BooleanAnnotation links.
- getCommentAnnotationAnnotationCount
  
  public int getCommentAnnotationAnnotationCount(int commentAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a CommentAnnotation. This method returns the number of references to the specified CommentAnnotation held by all model objects.
  
  Specified by:
  
  getCommentAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  Returns:
  
  the number of CommentAnnotation links.
- getDoubleAnnotationAnnotationCount
  
  public int getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a DoubleAnnotation. This method returns the number of references to the specified DoubleAnnotation held by all model objects.
  
  Specified by:
  
  getDoubleAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  Returns:
  
  the number of DoubleAnnotation links.
- getFileAnnotationAnnotationCount
  
  public int getFileAnnotationAnnotationCount(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a FileAnnotation. This method returns the number of references to the specified FileAnnotation held by all model objects.
  
  Specified by:
  
  getFileAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the number of FileAnnotation links.
- getListAnnotationAnnotationCount
  
  public int getListAnnotationAnnotationCount(int listAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a ListAnnotation. This method returns the number of references to the specified ListAnnotation held by all model objects.
  
  Specified by:
  
  getListAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  listAnnotationIndex - the ListAnnotation index.
  
  Returns:
  
  the number of ListAnnotation links.
- getLongAnnotationAnnotationCount
  
  public int getLongAnnotationAnnotationCount(int longAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a LongAnnotation. This method returns the number of references to the specified LongAnnotation held by all model objects.
  
  Specified by:
  
  getLongAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  Returns:
  
  the number of LongAnnotation links.
- getMapAnnotationAnnotationCount
  
  public int getMapAnnotationAnnotationCount(int mapAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a MapAnnotation. This method returns the number of references to the specified MapAnnotation held by all model objects.
  
  Specified by:
  
  getMapAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  Returns:
  
  the number of MapAnnotation links.
- getTagAnnotationAnnotationCount
  
  public int getTagAnnotationAnnotationCount(int tagAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a TagAnnotation. This method returns the number of references to the specified TagAnnotation held by all model objects.
  
  Specified by:
  
  getTagAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  Returns:
  
  the number of TagAnnotation links.
- getTermAnnotationAnnotationCount
  
  public int getTermAnnotationAnnotationCount(int termAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a TermAnnotation. This method returns the number of references to the specified TermAnnotation held by all model objects.
  
  Specified by:
  
  getTermAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  Returns:
  
  the number of TermAnnotation links.
- getTimestampAnnotationAnnotationCount
  
  public int getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to a TimestampAnnotation. This method returns the number of references to the specified TimestampAnnotation held by all model objects.
  
  Specified by:
  
  getTimestampAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  Returns:
  
  the number of TimestampAnnotation links.
- getXMLAnnotationAnnotationCount
  
  public int getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of links to an XMLAnnotation. This method returns the number of references to the specified XMLAnnotation held by all model objects.
  
  Specified by:
  
  getXMLAnnotationAnnotationCount in interface MetadataRetrieve
  
  Parameters:
  
  xmlAnnotationIndex - the XMLAnnotation index.
  
  Returns:
  
  the number of XMLAnnotation links.
- getLightSourceType
  
  public java.lang.String getLightSourceType(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the type of a LightSource.
  
  Specified by:
  
  getLightSourceType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LightSource type.
- getLightSourceCount
  
  public int getLightSourceCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of LightSource elements.
  
  Specified by:
  
  getLightSourceCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of LightSource elements.
- getShapeType
  
  public java.lang.String getShapeType(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the type of a Shape.
  
  Specified by:
  
  getShapeType in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Shape type.
- getShapeCount
  
  public int getShapeCount(int ROIIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Shape elements.
  
  Specified by:
  
  getShapeCount in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  Returns:
  
  the number of Shape elements.
- getChannelAnnotationRefCount
  
  public int getChannelAnnotationRefCount(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Channel.
  
  Specified by:
  
  getChannelAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getDatasetAnnotationRefCount
  
  public int getDatasetAnnotationRefCount(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Dataset.
  
  Specified by:
  
  getDatasetAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getDetectorAnnotationRefCount
  
  public int getDetectorAnnotationRefCount(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Detector.
  
  Specified by:
  
  getDetectorAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getDichroicAnnotationRefCount
  
  public int getDichroicAnnotationRefCount(int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Dichroic.
  
  Specified by:
  
  getDichroicAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getExperimenterAnnotationRefCount
  
  public int getExperimenterAnnotationRefCount(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Experimenter.
  
  Specified by:
  
  getExperimenterAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getExperimenterGroupAnnotationRefCount
  
  public int getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getFilterAnnotationRefCount
  
  public int getFilterAnnotationRefCount(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Filter.
  
  Specified by:
  
  getFilterAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getFolderAnnotationRefCount
  
  public int getFolderAnnotationRefCount(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Folder.
  
  Specified by:
  
  getFolderAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getImageAnnotationRefCount
  
  public int getImageAnnotationRefCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Image.
  
  Specified by:
  
  getImageAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getInstrumentAnnotationRefCount
  
  public int getInstrumentAnnotationRefCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Instrument.
  
  Specified by:
  
  getInstrumentAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getLightPathAnnotationRefCount
  
  public int getLightPathAnnotationRefCount(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in LightPath.
  
  Specified by:
  
  getLightPathAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getLightSourceAnnotationRefCount
  
  public int getLightSourceAnnotationRefCount(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in LightSource.
  
  Specified by:
  
  getLightSourceAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getObjectiveAnnotationRefCount
  
  public int getObjectiveAnnotationRefCount(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Objective.
  
  Specified by:
  
  getObjectiveAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getPlaneAnnotationRefCount
  
  public int getPlaneAnnotationRefCount(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Plane.
  
  Specified by:
  
  getPlaneAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getPlateAnnotationRefCount
  
  public int getPlateAnnotationRefCount(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Plate.
  
  Specified by:
  
  getPlateAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getPlateAcquisitionAnnotationRefCount
  
  public int getPlateAcquisitionAnnotationRefCount(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getProjectAnnotationRefCount
  
  public int getProjectAnnotationRefCount(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Project.
  
  Specified by:
  
  getProjectAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getROIAnnotationRefCount
  
  public int getROIAnnotationRefCount(int ROIIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in ROI.
  
  Specified by:
  
  getROIAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getReagentAnnotationRefCount
  
  public int getReagentAnnotationRefCount(int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Reagent.
  
  Specified by:
  
  getReagentAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getScreenAnnotationRefCount
  
  public int getScreenAnnotationRefCount(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Screen.
  
  Specified by:
  
  getScreenAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getShapeAnnotationRefCount
  
  public int getShapeAnnotationRefCount(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Shape.
  
  Specified by:
  
  getShapeAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getWellAnnotationRefCount
  
  public int getWellAnnotationRefCount(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of AnnotationRef elements in Well.
  
  Specified by:
  
  getWellAnnotationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the number of AnnotationRef elements.
- getPixelsBinDataCount
  
  public int getPixelsBinDataCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of BinData elements in Pixels.
  
  Specified by:
  
  getPixelsBinDataCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of BinData elements.
- getBooleanAnnotationCount
  
  public int getBooleanAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of BooleanAnnotation elements.
  
  Specified by:
  
  getBooleanAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of BooleanAnnotation elements.
- getChannelCount
  
  public int getChannelCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Channel elements.
  
  Specified by:
  
  getChannelCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of Channel elements.
- getCommentAnnotationCount
  
  public int getCommentAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of CommentAnnotation elements.
  
  Specified by:
  
  getCommentAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of CommentAnnotation elements.
- getDatasetCount
  
  public int getDatasetCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Dataset elements.
  
  Specified by:
  
  getDatasetCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Dataset elements.
- getDatasetRefCount
  
  public int getDatasetRefCount(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of DatasetRef elements.
  
  Specified by:
  
  getDatasetRefCount in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the number of DatasetRef elements.
- getDetectorCount
  
  public int getDetectorCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Detector elements.
  
  Specified by:
  
  getDetectorCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of Detector elements.
- getDichroicCount
  
  public int getDichroicCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Dichroic elements.
  
  Specified by:
  
  getDichroicCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of Dichroic elements.
- getDoubleAnnotationCount
  
  public int getDoubleAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of DoubleAnnotation elements.
  
  Specified by:
  
  getDoubleAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of DoubleAnnotation elements.
- getFilterSetEmissionFilterRefCount
  
  public int getFilterSetEmissionFilterRefCount(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of EmissionFilterRef elements in FilterSet.
  
  Specified by:
  
  getFilterSetEmissionFilterRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the number of EmissionFilterRef elements.
- getLightPathEmissionFilterRefCount
  
  public int getLightPathEmissionFilterRefCount(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of EmissionFilterRef elements in LightPath.
  
  Specified by:
  
  getLightPathEmissionFilterRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the number of EmissionFilterRef elements.
- getFilterSetExcitationFilterRefCount
  
  public int getFilterSetExcitationFilterRefCount(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ExcitationFilterRef elements in FilterSet.
  
  Specified by:
  
  getFilterSetExcitationFilterRefCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the number of ExcitationFilterRef elements.
- getLightPathExcitationFilterRefCount
  
  public int getLightPathExcitationFilterRefCount(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ExcitationFilterRef elements in LightPath.
  
  Specified by:
  
  getLightPathExcitationFilterRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the number of ExcitationFilterRef elements.
- getExperimentCount
  
  public int getExperimentCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Experiment elements.
  
  Specified by:
  
  getExperimentCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Experiment elements.
- getExperimenterCount
  
  public int getExperimenterCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Experimenter elements.
  
  Specified by:
  
  getExperimenterCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Experimenter elements.
- getExperimenterGroupCount
  
  public int getExperimenterGroupCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ExperimenterGroup elements.
  
  Specified by:
  
  getExperimenterGroupCount in interface MetadataRetrieve
  
  Returns:
  
  the number of ExperimenterGroup elements.
- getExperimenterGroupExperimenterRefCount
  
  public int getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ExperimenterRef elements in ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupExperimenterRefCount in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  Returns:
  
  the number of ExperimenterRef elements.
- getFileAnnotationCount
  
  public int getFileAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of FileAnnotation elements.
  
  Specified by:
  
  getFileAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of FileAnnotation elements.
- getFilterCount
  
  public int getFilterCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Filter elements.
  
  Specified by:
  
  getFilterCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of Filter elements.
- getFilterSetCount
  
  public int getFilterSetCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of FilterSet elements.
  
  Specified by:
  
  getFilterSetCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of FilterSet elements.
- getFolderCount
  
  public int getFolderCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Folder elements.
  
  Specified by:
  
  getFolderCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Folder elements.
- getFolderRefCount
  
  public int getFolderRefCount(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of FolderRef elements.
  
  Specified by:
  
  getFolderRefCount in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the number of FolderRef elements.
- getImageCount
  
  public int getImageCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Image elements.
  
  Specified by:
  
  getImageCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Image elements.
- getDatasetImageRefCount
  
  public int getDatasetImageRefCount(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ImageRef elements in Dataset.
  
  Specified by:
  
  getDatasetImageRefCount in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the number of ImageRef elements.
- getFolderImageRefCount
  
  public int getFolderImageRefCount(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ImageRef elements in Folder.
  
  Specified by:
  
  getFolderImageRefCount in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the number of ImageRef elements.
- getInstrumentCount
  
  public int getInstrumentCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Instrument elements.
  
  Specified by:
  
  getInstrumentCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Instrument elements.
- getLeaderCount
  
  public int getLeaderCount(int experimenterGroupIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Leader elements.
  
  Specified by:
  
  getLeaderCount in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  Returns:
  
  the number of Leader elements.
- getMicrobeamManipulationLightSourceSettingsCount
  
  public int getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of LightSourceSettings elements in MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationLightSourceSettingsCount in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  Returns:
  
  the number of LightSourceSettings elements.
- getListAnnotationCount
  
  public int getListAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ListAnnotation elements.
  
  Specified by:
  
  getListAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of ListAnnotation elements.
- getLongAnnotationCount
  
  public int getLongAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of LongAnnotation elements.
  
  Specified by:
  
  getLongAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of LongAnnotation elements.
- getMapAnnotationCount
  
  public int getMapAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of MapAnnotation elements.
  
  Specified by:
  
  getMapAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of MapAnnotation elements.
- getMicrobeamManipulationCount
  
  public int getMicrobeamManipulationCount(int experimentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of MicrobeamManipulation elements.
  
  Specified by:
  
  getMicrobeamManipulationCount in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  Returns:
  
  the number of MicrobeamManipulation elements.
- getMicrobeamManipulationRefCount
  
  public int getMicrobeamManipulationRefCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of MicrobeamManipulationRef elements.
  
  Specified by:
  
  getMicrobeamManipulationRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of MicrobeamManipulationRef elements.
- getObjectiveCount
  
  public int getObjectiveCount(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Objective elements.
  
  Specified by:
  
  getObjectiveCount in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the number of Objective elements.
- getPlaneCount
  
  public int getPlaneCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Plane elements.
  
  Specified by:
  
  getPlaneCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of Plane elements.
- getPlateCount
  
  public int getPlateCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Plate elements.
  
  Specified by:
  
  getPlateCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Plate elements.
- getPlateAcquisitionCount
  
  public int getPlateAcquisitionCount(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of PlateAcquisition elements.
  
  Specified by:
  
  getPlateAcquisitionCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the number of PlateAcquisition elements.
- getPlateRefCount
  
  public int getPlateRefCount(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of PlateRef elements.
  
  Specified by:
  
  getPlateRefCount in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the number of PlateRef elements.
- getProjectCount
  
  public int getProjectCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Project elements.
  
  Specified by:
  
  getProjectCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Project elements.
- getROICount
  
  public int getROICount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ROI elements.
  
  Specified by:
  
  getROICount in interface MetadataRetrieve
  
  Returns:
  
  the number of ROI elements.
- getFolderROIRefCount
  
  public int getFolderROIRefCount(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ROIRef elements in Folder.
  
  Specified by:
  
  getFolderROIRefCount in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the number of ROIRef elements.
- getImageROIRefCount
  
  public int getImageROIRefCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ROIRef elements in Image.
  
  Specified by:
  
  getImageROIRefCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of ROIRef elements.
- getMicrobeamManipulationROIRefCount
  
  public int getMicrobeamManipulationROIRefCount(int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of ROIRef elements in MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationROIRefCount in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  Returns:
  
  the number of ROIRef elements.
- getReagentCount
  
  public int getReagentCount(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Reagent elements.
  
  Specified by:
  
  getReagentCount in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the number of Reagent elements.
- getScreenCount
  
  public int getScreenCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Screen elements.
  
  Specified by:
  
  getScreenCount in interface MetadataRetrieve
  
  Returns:
  
  the number of Screen elements.
- getTagAnnotationCount
  
  public int getTagAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of TagAnnotation elements.
  
  Specified by:
  
  getTagAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of TagAnnotation elements.
- getTermAnnotationCount
  
  public int getTermAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of TermAnnotation elements.
  
  Specified by:
  
  getTermAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of TermAnnotation elements.
- getTiffDataCount
  
  public int getTiffDataCount(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of TiffData elements.
  
  Specified by:
  
  getTiffDataCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the number of TiffData elements.
- getTimestampAnnotationCount
  
  public int getTimestampAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of TimestampAnnotation elements.
  
  Specified by:
  
  getTimestampAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of TimestampAnnotation elements.
- setUUIDValue
  
  public void setUUIDValue(java.lang.String value, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the text value of UUID.
  
  Specified by:
  
  setUUIDValue in interface MetadataStore
  
  Parameters:
  
  value - text value.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- getUUIDValue
  
  public java.lang.String getUUIDValue(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the text value of UUID.
  
  Specified by:
  
  getUUIDValue in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the text value.
- getWellCount
  
  public int getWellCount(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of Well elements.
  
  Specified by:
  
  getWellCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the number of Well elements.
- getWellSampleCount
  
  public int getWellSampleCount(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of WellSample elements.
  
  Specified by:
  
  getWellSampleCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the number of WellSample elements.
- getWellSampleRefCount
  
  public int getWellSampleRefCount(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of WellSampleRef elements.
  
  Specified by:
  
  getWellSampleRefCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the number of WellSampleRef elements.
- getXMLAnnotationCount
  
  public int getXMLAnnotationCount()
  
  Description copied from interface: MetadataRetrieve
  
  Get the number of XMLAnnotation elements.
  
  Specified by:
  
  getXMLAnnotationCount in interface MetadataRetrieve
  
  Returns:
  
  the number of XMLAnnotation elements.
- getUUID
  
  public java.lang.String getUUID()
  
  Gets the UUID associated with this collection of metadata.
  
  Specified by:
  
  getUUID in interface MetadataRetrieve
- getCreator
  
  public java.lang.String getCreator()
  
  Gets the Creator associated with this collection of metadata.
  
  Specified by:
  
  getCreator in interface MetadataRetrieve
- getMapAnnotationValue
  
  public java.util.List<MapPair> getMapAnnotationValue(int mapAnnotationIndex)
  
  Gets the Map value associated with this annotation
  
  Specified by:
  
  getMapAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  Returns:
  
  the MapAnnotation values.
- getGenericExcitationSourceMap
  
  public java.util.List<MapPair> getGenericExcitationSourceMap(int instrumentIndex, int lightSourceIndex)
  
  Gets the Map value associated with this generic light source
  
  Specified by:
  
  getGenericExcitationSourceMap in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the MapAnnotation values.
- getImagingEnvironmentMap
  
  public java.util.List<MapPair> getImagingEnvironmentMap(int imageIndex)
  
  Gets the Map value associated with this imaging environment
  
  Specified by:
  
  getImagingEnvironmentMap in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the MapAnnotation values.
- getArcAnnotationRef
  
  public java.lang.String getArcAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Arc.
  
  Specified by:
  
  getArcAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getArcID
  
  public java.lang.String getArcID(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Arc.
  
  Specified by:
  
  getArcID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the ID property.
- getArcLotNumber
  
  public java.lang.String getArcLotNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Arc.
  
  Specified by:
  
  getArcLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LotNumber property.
- getArcManufacturer
  
  public java.lang.String getArcManufacturer(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Arc.
  
  Specified by:
  
  getArcManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Manufacturer property.
- getArcModel
  
  public java.lang.String getArcModel(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Arc.
  
  Specified by:
  
  getArcModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Model property.
- getArcPower
  
  public Power getArcPower(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Power property of Arc.
  
  Specified by:
  
  getArcPower in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Power property.
- getArcSerialNumber
  
  public java.lang.String getArcSerialNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Arc.
  
  Specified by:
  
  getArcSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the SerialNumber property.
- getArcType
  
  public ArcType getArcType(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Arc.
  
  Specified by:
  
  getArcType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Type property.
- getBinaryFileBinData
  
  public byte[] getBinaryFileBinData(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Base64Binary property of BinData.
  
  Specified by:
  
  getBinaryFileBinData in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Base64Binary property.
- getMaskBinData
  
  public byte[] getMaskBinData(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Base64Binary property of BinData.
  
  Specified by:
  
  getMaskBinData in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Base64Binary property.
- getPixelsBinData
  
  public byte[] getPixelsBinData(int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Base64Binary property of BinData.
  
  Specified by:
  
  getPixelsBinData in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
  
  Returns:
  
  the Base64Binary property.
- getBinaryFileBinDataBigEndian
  
  public java.lang.Boolean getBinaryFileBinDataBigEndian(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the BigEndian property of BinData.
  
  Specified by:
  
  getBinaryFileBinDataBigEndian in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the BigEndian property.
- getMaskBinDataBigEndian
  
  public java.lang.Boolean getMaskBinDataBigEndian(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the BigEndian property of BinData.
  
  Specified by:
  
  getMaskBinDataBigEndian in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the BigEndian property.
- getPixelsBinDataBigEndian
  
  public java.lang.Boolean getPixelsBinDataBigEndian(int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the BigEndian property of BinData.
  
  Specified by:
  
  getPixelsBinDataBigEndian in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
  
  Returns:
  
  the BigEndian property.
- getBinaryFileBinDataCompression
  
  public Compression getBinaryFileBinDataCompression(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Compression property of BinData.
  
  Specified by:
  
  getBinaryFileBinDataCompression in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Compression property.
- getMaskBinDataCompression
  
  public Compression getMaskBinDataCompression(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Compression property of BinData.
  
  Specified by:
  
  getMaskBinDataCompression in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Compression property.
- getPixelsBinDataCompression
  
  public Compression getPixelsBinDataCompression(int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Compression property of BinData.
  
  Specified by:
  
  getPixelsBinDataCompression in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
  
  Returns:
  
  the Compression property.
- getBinaryFileBinDataLength
  
  public NonNegativeLong getBinaryFileBinDataLength(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Length property of BinData.
  
  Specified by:
  
  getBinaryFileBinDataLength in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Length property.
- getMaskBinDataLength
  
  public NonNegativeLong getMaskBinDataLength(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Length property of BinData.
  
  Specified by:
  
  getMaskBinDataLength in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Length property.
- getPixelsBinDataLength
  
  public NonNegativeLong getPixelsBinDataLength(int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Length property of BinData.
  
  Specified by:
  
  getPixelsBinDataLength in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
  
  Returns:
  
  the Length property.
- getBinaryFileFileName
  
  public java.lang.String getBinaryFileFileName(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FileName property of BinaryFile.
  
  Specified by:
  
  getBinaryFileFileName in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the FileName property.
- getBinaryFileMIMEType
  
  public java.lang.String getBinaryFileMIMEType(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MIMEType property of BinaryFile.
  
  Specified by:
  
  getBinaryFileMIMEType in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the MIMEType property.
- getBinaryFileSize
  
  public NonNegativeLong getBinaryFileSize(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Size property of BinaryFile.
  
  Specified by:
  
  getBinaryFileSize in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Size property.
- getBinaryOnlyMetadataFile
  
  public java.lang.String getBinaryOnlyMetadataFile()
  
  Description copied from interface: MetadataRetrieve
  
  Get the MetadataFile property of BinaryOnly.
  
  Specified by:
  
  getBinaryOnlyMetadataFile in interface MetadataRetrieve
  
  Returns:
  
  the MetadataFile property.
- getBinaryOnlyUUID
  
  public java.lang.String getBinaryOnlyUUID()
  
  Description copied from interface: MetadataRetrieve
  
  Get the UUID property of BinaryOnly.
  
  Specified by:
  
  getBinaryOnlyUUID in interface MetadataRetrieve
  
  Returns:
  
  the UUID property.
- getBooleanAnnotationAnnotationRef
  
  public java.lang.String getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of BooleanAnnotation.
  
  Specified by:
  
  getBooleanAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getBooleanAnnotationAnnotator
  
  public java.lang.String getBooleanAnnotationAnnotator(int booleanAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of BooleanAnnotation.
  
  Specified by:
  
  getBooleanAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  Returns:
  
  the Annotator property.
- getBooleanAnnotationDescription
  
  public java.lang.String getBooleanAnnotationDescription(int booleanAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of BooleanAnnotation.
  
  Specified by:
  
  getBooleanAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  Returns:
  
  the Description property.
- getBooleanAnnotationID
  
  public java.lang.String getBooleanAnnotationID(int booleanAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of BooleanAnnotation.
  
  Specified by:
  
  getBooleanAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  Returns:
  
  the ID property.
- getBooleanAnnotationNamespace
  
  public java.lang.String getBooleanAnnotationNamespace(int booleanAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of BooleanAnnotation.
  
  Specified by:
  
  getBooleanAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  Returns:
  
  the Namespace property.
- getBooleanAnnotationValue
  
  public java.lang.Boolean getBooleanAnnotationValue(int booleanAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of BooleanAnnotation.
  
  Specified by:
  
  getBooleanAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  Returns:
  
  the Value property.
- getChannelAcquisitionMode
  
  public AcquisitionMode getChannelAcquisitionMode(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AcquisitionMode property of Channel.
  
  Specified by:
  
  getChannelAcquisitionMode in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the AcquisitionMode property.
- getChannelAnnotationRef
  
  public java.lang.String getChannelAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Channel.
  
  Specified by:
  
  getChannelAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getChannelColor
  
  public Color getChannelColor(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Color property of Channel.
  
  Specified by:
  
  getChannelColor in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Color property.
- getChannelContrastMethod
  
  public ContrastMethod getChannelContrastMethod(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ContrastMethod property of Channel.
  
  Specified by:
  
  getChannelContrastMethod in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the ContrastMethod property.
- getChannelEmissionWavelength
  
  public Length getChannelEmissionWavelength(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the EmissionWavelength property of Channel.
  
  Specified by:
  
  getChannelEmissionWavelength in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the EmissionWavelength property.
- getChannelExcitationWavelength
  
  public Length getChannelExcitationWavelength(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExcitationWavelength property of Channel.
  
  Specified by:
  
  getChannelExcitationWavelength in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the ExcitationWavelength property.
- getChannelFilterSetRef
  
  public java.lang.String getChannelFilterSetRef(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FilterSetRef property of Channel.
  
  Specified by:
  
  getChannelFilterSetRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the FilterSetRef property.
- getChannelFluor
  
  public java.lang.String getChannelFluor(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Fluor property of Channel.
  
  Specified by:
  
  getChannelFluor in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Fluor property.
- getChannelID
  
  public java.lang.String getChannelID(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Channel.
  
  Specified by:
  
  getChannelID in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the ID property.
- getChannelIlluminationType
  
  public IlluminationType getChannelIlluminationType(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the IlluminationType property of Channel.
  
  Specified by:
  
  getChannelIlluminationType in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the IlluminationType property.
- getChannelNDFilter
  
  public java.lang.Double getChannelNDFilter(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the NDFilter property of Channel.
  
  Specified by:
  
  getChannelNDFilter in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the NDFilter property.
- getChannelName
  
  public java.lang.String getChannelName(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Channel.
  
  Specified by:
  
  getChannelName in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Name property.
- getChannelPinholeSize
  
  public Length getChannelPinholeSize(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PinholeSize property of Channel.
  
  Specified by:
  
  getChannelPinholeSize in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the PinholeSize property.
- getChannelPockelCellSetting
  
  public java.lang.Integer getChannelPockelCellSetting(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PockelCellSetting property of Channel.
  
  Specified by:
  
  getChannelPockelCellSetting in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the PockelCellSetting property.
- getChannelSamplesPerPixel
  
  public PositiveInteger getChannelSamplesPerPixel(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SamplesPerPixel property of Channel.
  
  Specified by:
  
  getChannelSamplesPerPixel in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the SamplesPerPixel property.
- getCommentAnnotationAnnotationRef
  
  public java.lang.String getCommentAnnotationAnnotationRef(int commentAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of CommentAnnotation.
  
  Specified by:
  
  getCommentAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getCommentAnnotationAnnotator
  
  public java.lang.String getCommentAnnotationAnnotator(int commentAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of CommentAnnotation.
  
  Specified by:
  
  getCommentAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  Returns:
  
  the Annotator property.
- getCommentAnnotationDescription
  
  public java.lang.String getCommentAnnotationDescription(int commentAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of CommentAnnotation.
  
  Specified by:
  
  getCommentAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  Returns:
  
  the Description property.
- getCommentAnnotationID
  
  public java.lang.String getCommentAnnotationID(int commentAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of CommentAnnotation.
  
  Specified by:
  
  getCommentAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  Returns:
  
  the ID property.
- getCommentAnnotationNamespace
  
  public java.lang.String getCommentAnnotationNamespace(int commentAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of CommentAnnotation.
  
  Specified by:
  
  getCommentAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  Returns:
  
  the Namespace property.
- getCommentAnnotationValue
  
  public java.lang.String getCommentAnnotationValue(int commentAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of CommentAnnotation.
  
  Specified by:
  
  getCommentAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  Returns:
  
  the Value property.
- getDatasetAnnotationRef
  
  public java.lang.String getDatasetAnnotationRef(int datasetIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Dataset.
  
  Specified by:
  
  getDatasetAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getDatasetDescription
  
  public java.lang.String getDatasetDescription(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Dataset.
  
  Specified by:
  
  getDatasetDescription in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the Description property.
- getDatasetExperimenterGroupRef
  
  public java.lang.String getDatasetExperimenterGroupRef(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterGroupRef property of Dataset.
  
  Specified by:
  
  getDatasetExperimenterGroupRef in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the ExperimenterGroupRef property.
- getDatasetExperimenterRef
  
  public java.lang.String getDatasetExperimenterRef(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterRef property of Dataset.
  
  Specified by:
  
  getDatasetExperimenterRef in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the ExperimenterRef property.
- getDatasetID
  
  public java.lang.String getDatasetID(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Dataset.
  
  Specified by:
  
  getDatasetID in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the ID property.
- getDatasetImageRef
  
  public java.lang.String getDatasetImageRef(int datasetIndex, int imageRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ImageRef property of Dataset.
  
  Specified by:
  
  getDatasetImageRef in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  imageRefIndex - ImageRef index.
  
  Returns:
  
  the ImageRef property.
- getDatasetName
  
  public java.lang.String getDatasetName(int datasetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Dataset.
  
  Specified by:
  
  getDatasetName in interface MetadataRetrieve
  
  Parameters:
  
  datasetIndex - the Dataset index.
  
  Returns:
  
  the Name property.
- getDetectorAmplificationGain
  
  public java.lang.Double getDetectorAmplificationGain(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AmplificationGain property of Detector.
  
  Specified by:
  
  getDetectorAmplificationGain in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the AmplificationGain property.
- getDetectorAnnotationRef
  
  public java.lang.String getDetectorAnnotationRef(int instrumentIndex, int detectorIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Detector.
  
  Specified by:
  
  getDetectorAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getDetectorGain
  
  public java.lang.Double getDetectorGain(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Gain property of Detector.
  
  Specified by:
  
  getDetectorGain in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Gain property.
- getDetectorID
  
  public java.lang.String getDetectorID(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Detector.
  
  Specified by:
  
  getDetectorID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the ID property.
- getDetectorLotNumber
  
  public java.lang.String getDetectorLotNumber(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Detector.
  
  Specified by:
  
  getDetectorLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the LotNumber property.
- getDetectorManufacturer
  
  public java.lang.String getDetectorManufacturer(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Detector.
  
  Specified by:
  
  getDetectorManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Manufacturer property.
- getDetectorModel
  
  public java.lang.String getDetectorModel(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Detector.
  
  Specified by:
  
  getDetectorModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Model property.
- getDetectorOffset
  
  public java.lang.Double getDetectorOffset(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Offset property of Detector.
  
  Specified by:
  
  getDetectorOffset in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Offset property.
- getDetectorSerialNumber
  
  public java.lang.String getDetectorSerialNumber(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Detector.
  
  Specified by:
  
  getDetectorSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the SerialNumber property.
- getDetectorType
  
  public DetectorType getDetectorType(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Detector.
  
  Specified by:
  
  getDetectorType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Type property.
- getDetectorVoltage
  
  public ElectricPotential getDetectorVoltage(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Voltage property of Detector.
  
  Specified by:
  
  getDetectorVoltage in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Voltage property.
- getDetectorZoom
  
  public java.lang.Double getDetectorZoom(int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Zoom property of Detector.
  
  Specified by:
  
  getDetectorZoom in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  Returns:
  
  the Zoom property.
- getDetectorSettingsBinning
  
  public Binning getDetectorSettingsBinning(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Binning property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsBinning in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Binning property.
- getDetectorSettingsGain
  
  public java.lang.Double getDetectorSettingsGain(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Gain property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsGain in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Gain property.
- getDetectorSettingsID
  
  public java.lang.String getDetectorSettingsID(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsID in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the ID property.
- getDetectorSettingsIntegration
  
  public PositiveInteger getDetectorSettingsIntegration(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Integration property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsIntegration in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Integration property.
- getDetectorSettingsOffset
  
  public java.lang.Double getDetectorSettingsOffset(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Offset property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsOffset in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Offset property.
- getDetectorSettingsReadOutRate
  
  public Frequency getDetectorSettingsReadOutRate(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ReadOutRate property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsReadOutRate in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the ReadOutRate property.
- getDetectorSettingsVoltage
  
  public ElectricPotential getDetectorSettingsVoltage(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Voltage property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsVoltage in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Voltage property.
- getDetectorSettingsZoom
  
  public java.lang.Double getDetectorSettingsZoom(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Zoom property of DetectorSettings.
  
  Specified by:
  
  getDetectorSettingsZoom in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Zoom property.
- getDichroicAnnotationRef
  
  public java.lang.String getDichroicAnnotationRef(int instrumentIndex, int dichroicIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Dichroic.
  
  Specified by:
  
  getDichroicAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getDichroicID
  
  public java.lang.String getDichroicID(int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Dichroic.
  
  Specified by:
  
  getDichroicID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  Returns:
  
  the ID property.
- getDichroicLotNumber
  
  public java.lang.String getDichroicLotNumber(int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Dichroic.
  
  Specified by:
  
  getDichroicLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  Returns:
  
  the LotNumber property.
- getDichroicManufacturer
  
  public java.lang.String getDichroicManufacturer(int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Dichroic.
  
  Specified by:
  
  getDichroicManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  Returns:
  
  the Manufacturer property.
- getDichroicModel
  
  public java.lang.String getDichroicModel(int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Dichroic.
  
  Specified by:
  
  getDichroicModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  Returns:
  
  the Model property.
- getDichroicSerialNumber
  
  public java.lang.String getDichroicSerialNumber(int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Dichroic.
  
  Specified by:
  
  getDichroicSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  Returns:
  
  the SerialNumber property.
- getDoubleAnnotationAnnotationRef
  
  public java.lang.String getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of DoubleAnnotation.
  
  Specified by:
  
  getDoubleAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getDoubleAnnotationAnnotator
  
  public java.lang.String getDoubleAnnotationAnnotator(int doubleAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of DoubleAnnotation.
  
  Specified by:
  
  getDoubleAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  Returns:
  
  the Annotator property.
- getDoubleAnnotationDescription
  
  public java.lang.String getDoubleAnnotationDescription(int doubleAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of DoubleAnnotation.
  
  Specified by:
  
  getDoubleAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  Returns:
  
  the Description property.
- getDoubleAnnotationID
  
  public java.lang.String getDoubleAnnotationID(int doubleAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of DoubleAnnotation.
  
  Specified by:
  
  getDoubleAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  Returns:
  
  the ID property.
- getDoubleAnnotationNamespace
  
  public java.lang.String getDoubleAnnotationNamespace(int doubleAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of DoubleAnnotation.
  
  Specified by:
  
  getDoubleAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  Returns:
  
  the Namespace property.
- getDoubleAnnotationValue
  
  public java.lang.Double getDoubleAnnotationValue(int doubleAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of DoubleAnnotation.
  
  Specified by:
  
  getDoubleAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  Returns:
  
  the Value property.
- getEllipseAnnotationRef
  
  public java.lang.String getEllipseAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Ellipse.
  
  Specified by:
  
  getEllipseAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getEllipseFillColor
  
  public Color getEllipseFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Ellipse.
  
  Specified by:
  
  getEllipseFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getEllipseFillRule
  
  public FillRule getEllipseFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Ellipse.
  
  Specified by:
  
  getEllipseFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getEllipseFontFamily
  
  public FontFamily getEllipseFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Ellipse.
  
  Specified by:
  
  getEllipseFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getEllipseFontSize
  
  public Length getEllipseFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Ellipse.
  
  Specified by:
  
  getEllipseFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getEllipseFontStyle
  
  public FontStyle getEllipseFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Ellipse.
  
  Specified by:
  
  getEllipseFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getEllipseID
  
  public java.lang.String getEllipseID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Ellipse.
  
  Specified by:
  
  getEllipseID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getEllipseLocked
  
  public java.lang.Boolean getEllipseLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Ellipse.
  
  Specified by:
  
  getEllipseLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getEllipseRadiusX
  
  public java.lang.Double getEllipseRadiusX(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the RadiusX property of Ellipse.
  
  Specified by:
  
  getEllipseRadiusX in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the RadiusX property.
- getEllipseRadiusY
  
  public java.lang.Double getEllipseRadiusY(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the RadiusY property of Ellipse.
  
  Specified by:
  
  getEllipseRadiusY in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the RadiusY property.
- getEllipseStrokeColor
  
  public Color getEllipseStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Ellipse.
  
  Specified by:
  
  getEllipseStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getEllipseStrokeDashArray
  
  public java.lang.String getEllipseStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Ellipse.
  
  Specified by:
  
  getEllipseStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getEllipseStrokeWidth
  
  public Length getEllipseStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Ellipse.
  
  Specified by:
  
  getEllipseStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getEllipseText
  
  public java.lang.String getEllipseText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Ellipse.
  
  Specified by:
  
  getEllipseText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getEllipseTheC
  
  public NonNegativeInteger getEllipseTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Ellipse.
  
  Specified by:
  
  getEllipseTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getEllipseTheT
  
  public NonNegativeInteger getEllipseTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Ellipse.
  
  Specified by:
  
  getEllipseTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getEllipseTheZ
  
  public NonNegativeInteger getEllipseTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Ellipse.
  
  Specified by:
  
  getEllipseTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getEllipseTransform
  
  public AffineTransform getEllipseTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Ellipse.
  
  Specified by:
  
  getEllipseTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getEllipseX
  
  public java.lang.Double getEllipseX(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X property of Ellipse.
  
  Specified by:
  
  getEllipseX in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X property.
- getEllipseY
  
  public java.lang.Double getEllipseY(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y property of Ellipse.
  
  Specified by:
  
  getEllipseY in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y property.
- getExperimentDescription
  
  public java.lang.String getExperimentDescription(int experimentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Experiment.
  
  Specified by:
  
  getExperimentDescription in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  Returns:
  
  the Description property.
- getExperimentExperimenterRef
  
  public java.lang.String getExperimentExperimenterRef(int experimentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterRef property of Experiment.
  
  Specified by:
  
  getExperimentExperimenterRef in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  Returns:
  
  the ExperimenterRef property.
- getExperimentID
  
  public java.lang.String getExperimentID(int experimentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Experiment.
  
  Specified by:
  
  getExperimentID in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  Returns:
  
  the ID property.
- getExperimentType
  
  public ExperimentType getExperimentType(int experimentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Experiment.
  
  Specified by:
  
  getExperimentType in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  Returns:
  
  the Type property.
- getExperimenterAnnotationRef
  
  public java.lang.String getExperimenterAnnotationRef(int experimenterIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Experimenter.
  
  Specified by:
  
  getExperimenterAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getExperimenterEmail
  
  public java.lang.String getExperimenterEmail(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Email property of Experimenter.
  
  Specified by:
  
  getExperimenterEmail in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the Email property.
- getExperimenterFirstName
  
  public java.lang.String getExperimenterFirstName(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FirstName property of Experimenter.
  
  Specified by:
  
  getExperimenterFirstName in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the FirstName property.
- getExperimenterID
  
  public java.lang.String getExperimenterID(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Experimenter.
  
  Specified by:
  
  getExperimenterID in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the ID property.
- getExperimenterInstitution
  
  public java.lang.String getExperimenterInstitution(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Institution property of Experimenter.
  
  Specified by:
  
  getExperimenterInstitution in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the Institution property.
- getExperimenterLastName
  
  public java.lang.String getExperimenterLastName(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LastName property of Experimenter.
  
  Specified by:
  
  getExperimenterLastName in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the LastName property.
- getExperimenterMiddleName
  
  public java.lang.String getExperimenterMiddleName(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MiddleName property of Experimenter.
  
  Specified by:
  
  getExperimenterMiddleName in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the MiddleName property.
- getExperimenterUserName
  
  public java.lang.String getExperimenterUserName(int experimenterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the UserName property of Experimenter.
  
  Specified by:
  
  getExperimenterUserName in interface MetadataRetrieve
  
  Parameters:
  
  experimenterIndex - the Experimenter index.
  
  Returns:
  
  the UserName property.
- getExperimenterGroupAnnotationRef
  
  public java.lang.String getExperimenterGroupAnnotationRef(int experimenterGroupIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getExperimenterGroupDescription
  
  public java.lang.String getExperimenterGroupDescription(int experimenterGroupIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupDescription in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  Returns:
  
  the Description property.
- getExperimenterGroupExperimenterRef
  
  public java.lang.String getExperimenterGroupExperimenterRef(int experimenterGroupIndex, int experimenterRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterRef property of ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupExperimenterRef in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  experimenterRefIndex - ExperimenterRef index.
  
  Returns:
  
  the ExperimenterRef property.
- getExperimenterGroupID
  
  public java.lang.String getExperimenterGroupID(int experimenterGroupIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupID in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  Returns:
  
  the ID property.
- getExperimenterGroupLeader
  
  public java.lang.String getExperimenterGroupLeader(int experimenterGroupIndex, int leaderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Leader property of ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupLeader in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  leaderIndex - Leader index.
  
  Returns:
  
  the Leader property.
- getExperimenterGroupName
  
  public java.lang.String getExperimenterGroupName(int experimenterGroupIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of ExperimenterGroup.
  
  Specified by:
  
  getExperimenterGroupName in interface MetadataRetrieve
  
  Parameters:
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  Returns:
  
  the Name property.
- getFilamentAnnotationRef
  
  public java.lang.String getFilamentAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Filament.
  
  Specified by:
  
  getFilamentAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getFilamentID
  
  public java.lang.String getFilamentID(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Filament.
  
  Specified by:
  
  getFilamentID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the ID property.
- getFilamentLotNumber
  
  public java.lang.String getFilamentLotNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Filament.
  
  Specified by:
  
  getFilamentLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LotNumber property.
- getFilamentManufacturer
  
  public java.lang.String getFilamentManufacturer(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Filament.
  
  Specified by:
  
  getFilamentManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Manufacturer property.
- getFilamentModel
  
  public java.lang.String getFilamentModel(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Filament.
  
  Specified by:
  
  getFilamentModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Model property.
- getFilamentPower
  
  public Power getFilamentPower(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Power property of Filament.
  
  Specified by:
  
  getFilamentPower in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Power property.
- getFilamentSerialNumber
  
  public java.lang.String getFilamentSerialNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Filament.
  
  Specified by:
  
  getFilamentSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the SerialNumber property.
- getFilamentType
  
  public FilamentType getFilamentType(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Filament.
  
  Specified by:
  
  getFilamentType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Type property.
- getFileAnnotationAnnotationRef
  
  public java.lang.String getFileAnnotationAnnotationRef(int fileAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of FileAnnotation.
  
  Specified by:
  
  getFileAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getFileAnnotationAnnotator
  
  public java.lang.String getFileAnnotationAnnotator(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of FileAnnotation.
  
  Specified by:
  
  getFileAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Annotator property.
- getFileAnnotationDescription
  
  public java.lang.String getFileAnnotationDescription(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of FileAnnotation.
  
  Specified by:
  
  getFileAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Description property.
- getFileAnnotationID
  
  public java.lang.String getFileAnnotationID(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of FileAnnotation.
  
  Specified by:
  
  getFileAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the ID property.
- getFileAnnotationNamespace
  
  public java.lang.String getFileAnnotationNamespace(int fileAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of FileAnnotation.
  
  Specified by:
  
  getFileAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  fileAnnotationIndex - the FileAnnotation index.
  
  Returns:
  
  the Namespace property.
- getFilterAnnotationRef
  
  public java.lang.String getFilterAnnotationRef(int instrumentIndex, int filterIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Filter.
  
  Specified by:
  
  getFilterAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getFilterFilterWheel
  
  public java.lang.String getFilterFilterWheel(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FilterWheel property of Filter.
  
  Specified by:
  
  getFilterFilterWheel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the FilterWheel property.
- getFilterID
  
  public java.lang.String getFilterID(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Filter.
  
  Specified by:
  
  getFilterID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the ID property.
- getFilterLotNumber
  
  public java.lang.String getFilterLotNumber(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Filter.
  
  Specified by:
  
  getFilterLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the LotNumber property.
- getFilterManufacturer
  
  public java.lang.String getFilterManufacturer(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Filter.
  
  Specified by:
  
  getFilterManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the Manufacturer property.
- getFilterModel
  
  public java.lang.String getFilterModel(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Filter.
  
  Specified by:
  
  getFilterModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the Model property.
- getFilterSerialNumber
  
  public java.lang.String getFilterSerialNumber(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Filter.
  
  Specified by:
  
  getFilterSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the SerialNumber property.
- getFilterType
  
  public FilterType getFilterType(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Filter.
  
  Specified by:
  
  getFilterType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the Type property.
- getFilterSetDichroicRef
  
  public java.lang.String getFilterSetDichroicRef(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the DichroicRef property of FilterSet.
  
  Specified by:
  
  getFilterSetDichroicRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the DichroicRef property.
- getFilterSetEmissionFilterRef
  
  public java.lang.String getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the EmissionFilterRef property of FilterSet.
  
  Specified by:
  
  getFilterSetEmissionFilterRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  emissionFilterRefIndex - EmissionFilterRef index.
  
  Returns:
  
  the EmissionFilterRef property.
- getFilterSetExcitationFilterRef
  
  public java.lang.String getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExcitationFilterRef property of FilterSet.
  
  Specified by:
  
  getFilterSetExcitationFilterRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  excitationFilterRefIndex - ExcitationFilterRef index.
  
  Returns:
  
  the ExcitationFilterRef property.
- getFilterSetID
  
  public java.lang.String getFilterSetID(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of FilterSet.
  
  Specified by:
  
  getFilterSetID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the ID property.
- getFilterSetLotNumber
  
  public java.lang.String getFilterSetLotNumber(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of FilterSet.
  
  Specified by:
  
  getFilterSetLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the LotNumber property.
- getFilterSetManufacturer
  
  public java.lang.String getFilterSetManufacturer(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of FilterSet.
  
  Specified by:
  
  getFilterSetManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the Manufacturer property.
- getFilterSetModel
  
  public java.lang.String getFilterSetModel(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of FilterSet.
  
  Specified by:
  
  getFilterSetModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the Model property.
- getFilterSetSerialNumber
  
  public java.lang.String getFilterSetSerialNumber(int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of FilterSet.
  
  Specified by:
  
  getFilterSetSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  Returns:
  
  the SerialNumber property.
- getFolderAnnotationRef
  
  public java.lang.String getFolderAnnotationRef(int folderIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Folder.
  
  Specified by:
  
  getFolderAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getFolderDescription
  
  public java.lang.String getFolderDescription(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Folder.
  
  Specified by:
  
  getFolderDescription in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the Description property.
- getFolderFolderRef
  
  public java.lang.String getFolderFolderRef(int folderIndex, int folderRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FolderRef property of Folder.
  
  Specified by:
  
  getFolderFolderRef in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  folderRefIndex - FolderRef index.
  
  Returns:
  
  the FolderRef property.
- getFolderID
  
  public java.lang.String getFolderID(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Folder.
  
  Specified by:
  
  getFolderID in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the ID property.
- getFolderImageRef
  
  public java.lang.String getFolderImageRef(int folderIndex, int imageRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ImageRef property of Folder.
  
  Specified by:
  
  getFolderImageRef in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  imageRefIndex - ImageRef index.
  
  Returns:
  
  the ImageRef property.
- getFolderName
  
  public java.lang.String getFolderName(int folderIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Folder.
  
  Specified by:
  
  getFolderName in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  Returns:
  
  the Name property.
- getFolderROIRef
  
  public java.lang.String getFolderROIRef(int folderIndex, int ROIRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ROIRef property of Folder.
  
  Specified by:
  
  getFolderROIRef in interface MetadataRetrieve
  
  Parameters:
  
  folderIndex - the Folder index.
  
  ROIRefIndex - ROIRef index.
  
  Returns:
  
  the ROIRef property.
- getGenericExcitationSourceAnnotationRef
  
  public java.lang.String getGenericExcitationSourceAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourceAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getGenericExcitationSourceID
  
  public java.lang.String getGenericExcitationSourceID(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourceID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the ID property.
- getGenericExcitationSourceLotNumber
  
  public java.lang.String getGenericExcitationSourceLotNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourceLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LotNumber property.
- getGenericExcitationSourceManufacturer
  
  public java.lang.String getGenericExcitationSourceManufacturer(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourceManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Manufacturer property.
- getGenericExcitationSourceModel
  
  public java.lang.String getGenericExcitationSourceModel(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourceModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Model property.
- getGenericExcitationSourcePower
  
  public Power getGenericExcitationSourcePower(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Power property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourcePower in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Power property.
- getGenericExcitationSourceSerialNumber
  
  public java.lang.String getGenericExcitationSourceSerialNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of GenericExcitationSource.
  
  Specified by:
  
  getGenericExcitationSourceSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the SerialNumber property.
- getImageAcquisitionDate
  
  public Timestamp getImageAcquisitionDate(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AcquisitionDate property of Image.
  
  Specified by:
  
  getImageAcquisitionDate in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the AcquisitionDate property.
- getImageAnnotationRef
  
  public java.lang.String getImageAnnotationRef(int imageIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Image.
  
  Specified by:
  
  getImageAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getImageDescription
  
  public java.lang.String getImageDescription(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Image.
  
  Specified by:
  
  getImageDescription in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Description property.
- getImageExperimentRef
  
  public java.lang.String getImageExperimentRef(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimentRef property of Image.
  
  Specified by:
  
  getImageExperimentRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the ExperimentRef property.
- getImageExperimenterGroupRef
  
  public java.lang.String getImageExperimenterGroupRef(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterGroupRef property of Image.
  
  Specified by:
  
  getImageExperimenterGroupRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the ExperimenterGroupRef property.
- getImageExperimenterRef
  
  public java.lang.String getImageExperimenterRef(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterRef property of Image.
  
  Specified by:
  
  getImageExperimenterRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the ExperimenterRef property.
- getImageID
  
  public java.lang.String getImageID(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Image.
  
  Specified by:
  
  getImageID in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the ID property.
- getImageInstrumentRef
  
  public java.lang.String getImageInstrumentRef(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the InstrumentRef property of Image.
  
  Specified by:
  
  getImageInstrumentRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the InstrumentRef property.
- getImageMicrobeamManipulationRef
  
  public java.lang.String getImageMicrobeamManipulationRef(int imageIndex, int microbeamManipulationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MicrobeamManipulationRef property of Image.
  
  Specified by:
  
  getImageMicrobeamManipulationRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  microbeamManipulationRefIndex - MicrobeamManipulationRef index.
  
  Returns:
  
  the MicrobeamManipulationRef property.
- getImageName
  
  public java.lang.String getImageName(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Image.
  
  Specified by:
  
  getImageName in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Name property.
- getImageROIRef
  
  public java.lang.String getImageROIRef(int imageIndex, int ROIRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ROIRef property of Image.
  
  Specified by:
  
  getImageROIRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  ROIRefIndex - ROIRef index.
  
  Returns:
  
  the ROIRef property.
- getImagingEnvironmentAirPressure
  
  public Pressure getImagingEnvironmentAirPressure(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AirPressure property of ImagingEnvironment.
  
  Specified by:
  
  getImagingEnvironmentAirPressure in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the AirPressure property.
- getImagingEnvironmentCO2Percent
  
  public PercentFraction getImagingEnvironmentCO2Percent(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CO2Percent property of ImagingEnvironment.
  
  Specified by:
  
  getImagingEnvironmentCO2Percent in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the CO2Percent property.
- getImagingEnvironmentHumidity
  
  public PercentFraction getImagingEnvironmentHumidity(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Humidity property of ImagingEnvironment.
  
  Specified by:
  
  getImagingEnvironmentHumidity in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Humidity property.
- getImagingEnvironmentTemperature
  
  public Temperature getImagingEnvironmentTemperature(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Temperature property of ImagingEnvironment.
  
  Specified by:
  
  getImagingEnvironmentTemperature in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Temperature property.
- getInstrumentAnnotationRef
  
  public java.lang.String getInstrumentAnnotationRef(int instrumentIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Instrument.
  
  Specified by:
  
  getInstrumentAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getInstrumentID
  
  public java.lang.String getInstrumentID(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Instrument.
  
  Specified by:
  
  getInstrumentID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the ID property.
- getLabelAnnotationRef
  
  public java.lang.String getLabelAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Label.
  
  Specified by:
  
  getLabelAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getLabelFillColor
  
  public Color getLabelFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Label.
  
  Specified by:
  
  getLabelFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getLabelFillRule
  
  public FillRule getLabelFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Label.
  
  Specified by:
  
  getLabelFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getLabelFontFamily
  
  public FontFamily getLabelFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Label.
  
  Specified by:
  
  getLabelFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getLabelFontSize
  
  public Length getLabelFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Label.
  
  Specified by:
  
  getLabelFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getLabelFontStyle
  
  public FontStyle getLabelFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Label.
  
  Specified by:
  
  getLabelFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getLabelID
  
  public java.lang.String getLabelID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Label.
  
  Specified by:
  
  getLabelID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getLabelLocked
  
  public java.lang.Boolean getLabelLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Label.
  
  Specified by:
  
  getLabelLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getLabelStrokeColor
  
  public Color getLabelStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Label.
  
  Specified by:
  
  getLabelStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getLabelStrokeDashArray
  
  public java.lang.String getLabelStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Label.
  
  Specified by:
  
  getLabelStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getLabelStrokeWidth
  
  public Length getLabelStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Label.
  
  Specified by:
  
  getLabelStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getLabelText
  
  public java.lang.String getLabelText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Label.
  
  Specified by:
  
  getLabelText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getLabelTheC
  
  public NonNegativeInteger getLabelTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Label.
  
  Specified by:
  
  getLabelTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getLabelTheT
  
  public NonNegativeInteger getLabelTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Label.
  
  Specified by:
  
  getLabelTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getLabelTheZ
  
  public NonNegativeInteger getLabelTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Label.
  
  Specified by:
  
  getLabelTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getLabelTransform
  
  public AffineTransform getLabelTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Label.
  
  Specified by:
  
  getLabelTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getLabelX
  
  public java.lang.Double getLabelX(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X property of Label.
  
  Specified by:
  
  getLabelX in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X property.
- getLabelY
  
  public java.lang.Double getLabelY(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y property of Label.
  
  Specified by:
  
  getLabelY in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y property.
- getLaserAnnotationRef
  
  public java.lang.String getLaserAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Laser.
  
  Specified by:
  
  getLaserAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getLaserFrequencyMultiplication
  
  public PositiveInteger getLaserFrequencyMultiplication(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FrequencyMultiplication property of Laser.
  
  Specified by:
  
  getLaserFrequencyMultiplication in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the FrequencyMultiplication property.
- getLaserID
  
  public java.lang.String getLaserID(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Laser.
  
  Specified by:
  
  getLaserID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the ID property.
- getLaserLaserMedium
  
  public LaserMedium getLaserLaserMedium(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LaserMedium property of Laser.
  
  Specified by:
  
  getLaserLaserMedium in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LaserMedium property.
- getLaserLotNumber
  
  public java.lang.String getLaserLotNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Laser.
  
  Specified by:
  
  getLaserLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LotNumber property.
- getLaserManufacturer
  
  public java.lang.String getLaserManufacturer(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Laser.
  
  Specified by:
  
  getLaserManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Manufacturer property.
- getLaserModel
  
  public java.lang.String getLaserModel(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Laser.
  
  Specified by:
  
  getLaserModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Model property.
- getLaserPockelCell
  
  public java.lang.Boolean getLaserPockelCell(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PockelCell property of Laser.
  
  Specified by:
  
  getLaserPockelCell in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the PockelCell property.
- getLaserPower
  
  public Power getLaserPower(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Power property of Laser.
  
  Specified by:
  
  getLaserPower in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Power property.
- getLaserPulse
  
  public Pulse getLaserPulse(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Pulse property of Laser.
  
  Specified by:
  
  getLaserPulse in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Pulse property.
- getLaserPump
  
  public java.lang.String getLaserPump(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Pump property of Laser.
  
  Specified by:
  
  getLaserPump in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Pump property.
- getLaserRepetitionRate
  
  public Frequency getLaserRepetitionRate(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the RepetitionRate property of Laser.
  
  Specified by:
  
  getLaserRepetitionRate in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the RepetitionRate property.
- getLaserSerialNumber
  
  public java.lang.String getLaserSerialNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Laser.
  
  Specified by:
  
  getLaserSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the SerialNumber property.
- getLaserTuneable
  
  public java.lang.Boolean getLaserTuneable(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Tuneable property of Laser.
  
  Specified by:
  
  getLaserTuneable in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Tuneable property.
- getLaserType
  
  public LaserType getLaserType(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Laser.
  
  Specified by:
  
  getLaserType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Type property.
- getLaserWavelength
  
  public Length getLaserWavelength(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Wavelength property of Laser.
  
  Specified by:
  
  getLaserWavelength in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Wavelength property.
- getLightEmittingDiodeAnnotationRef
  
  public java.lang.String getLightEmittingDiodeAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodeAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getLightEmittingDiodeID
  
  public java.lang.String getLightEmittingDiodeID(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodeID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the ID property.
- getLightEmittingDiodeLotNumber
  
  public java.lang.String getLightEmittingDiodeLotNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodeLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the LotNumber property.
- getLightEmittingDiodeManufacturer
  
  public java.lang.String getLightEmittingDiodeManufacturer(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodeManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Manufacturer property.
- getLightEmittingDiodeModel
  
  public java.lang.String getLightEmittingDiodeModel(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodeModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Model property.
- getLightEmittingDiodePower
  
  public Power getLightEmittingDiodePower(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Power property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodePower in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the Power property.
- getLightEmittingDiodeSerialNumber
  
  public java.lang.String getLightEmittingDiodeSerialNumber(int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of LightEmittingDiode.
  
  Specified by:
  
  getLightEmittingDiodeSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  Returns:
  
  the SerialNumber property.
- getLightPathAnnotationRef
  
  public java.lang.String getLightPathAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of LightPath.
  
  Specified by:
  
  getLightPathAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getLightPathDichroicRef
  
  public java.lang.String getLightPathDichroicRef(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the DichroicRef property of LightPath.
  
  Specified by:
  
  getLightPathDichroicRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the DichroicRef property.
- getLightPathEmissionFilterRef
  
  public java.lang.String getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the EmissionFilterRef property of LightPath.
  
  Specified by:
  
  getLightPathEmissionFilterRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  emissionFilterRefIndex - EmissionFilterRef index.
  
  Returns:
  
  the EmissionFilterRef property.
- getLightPathExcitationFilterRef
  
  public java.lang.String getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExcitationFilterRef property of LightPath.
  
  Specified by:
  
  getLightPathExcitationFilterRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  excitationFilterRefIndex - ExcitationFilterRef index.
  
  Returns:
  
  the ExcitationFilterRef property.
- getChannelLightSourceSettingsAttenuation
  
  public PercentFraction getChannelLightSourceSettingsAttenuation(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Attenuation property of LightSourceSettings.
  
  Specified by:
  
  getChannelLightSourceSettingsAttenuation in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Attenuation property.
- getMicrobeamManipulationLightSourceSettingsAttenuation
  
  public PercentFraction getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Attenuation property of LightSourceSettings.
  
  Specified by:
  
  getMicrobeamManipulationLightSourceSettingsAttenuation in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  lightSourceSettingsIndex - the LightSourceSettings index.
  
  Returns:
  
  the Attenuation property.
- getChannelLightSourceSettingsID
  
  public java.lang.String getChannelLightSourceSettingsID(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of LightSourceSettings.
  
  Specified by:
  
  getChannelLightSourceSettingsID in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the ID property.
- getMicrobeamManipulationLightSourceSettingsID
  
  public java.lang.String getMicrobeamManipulationLightSourceSettingsID(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of LightSourceSettings.
  
  Specified by:
  
  getMicrobeamManipulationLightSourceSettingsID in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  lightSourceSettingsIndex - the LightSourceSettings index.
  
  Returns:
  
  the ID property.
- getChannelLightSourceSettingsWavelength
  
  public Length getChannelLightSourceSettingsWavelength(int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Wavelength property of LightSourceSettings.
  
  Specified by:
  
  getChannelLightSourceSettingsWavelength in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  Returns:
  
  the Wavelength property.
- getMicrobeamManipulationLightSourceSettingsWavelength
  
  public Length getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Wavelength property of LightSourceSettings.
  
  Specified by:
  
  getMicrobeamManipulationLightSourceSettingsWavelength in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  lightSourceSettingsIndex - the LightSourceSettings index.
  
  Returns:
  
  the Wavelength property.
- getLineAnnotationRef
  
  public java.lang.String getLineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Line.
  
  Specified by:
  
  getLineAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getLineFillColor
  
  public Color getLineFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Line.
  
  Specified by:
  
  getLineFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getLineFillRule
  
  public FillRule getLineFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Line.
  
  Specified by:
  
  getLineFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getLineFontFamily
  
  public FontFamily getLineFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Line.
  
  Specified by:
  
  getLineFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getLineFontSize
  
  public Length getLineFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Line.
  
  Specified by:
  
  getLineFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getLineFontStyle
  
  public FontStyle getLineFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Line.
  
  Specified by:
  
  getLineFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getLineID
  
  public java.lang.String getLineID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Line.
  
  Specified by:
  
  getLineID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getLineLocked
  
  public java.lang.Boolean getLineLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Line.
  
  Specified by:
  
  getLineLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getLineMarkerEnd
  
  public Marker getLineMarkerEnd(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MarkerEnd property of Line.
  
  Specified by:
  
  getLineMarkerEnd in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the MarkerEnd property.
- getLineMarkerStart
  
  public Marker getLineMarkerStart(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MarkerStart property of Line.
  
  Specified by:
  
  getLineMarkerStart in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the MarkerStart property.
- getLineStrokeColor
  
  public Color getLineStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Line.
  
  Specified by:
  
  getLineStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getLineStrokeDashArray
  
  public java.lang.String getLineStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Line.
  
  Specified by:
  
  getLineStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getLineStrokeWidth
  
  public Length getLineStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Line.
  
  Specified by:
  
  getLineStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getLineText
  
  public java.lang.String getLineText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Line.
  
  Specified by:
  
  getLineText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getLineTheC
  
  public NonNegativeInteger getLineTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Line.
  
  Specified by:
  
  getLineTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getLineTheT
  
  public NonNegativeInteger getLineTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Line.
  
  Specified by:
  
  getLineTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getLineTheZ
  
  public NonNegativeInteger getLineTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Line.
  
  Specified by:
  
  getLineTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getLineTransform
  
  public AffineTransform getLineTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Line.
  
  Specified by:
  
  getLineTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getLineX1
  
  public java.lang.Double getLineX1(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X1 property of Line.
  
  Specified by:
  
  getLineX1 in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X1 property.
- getLineX2
  
  public java.lang.Double getLineX2(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X2 property of Line.
  
  Specified by:
  
  getLineX2 in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X2 property.
- getLineY1
  
  public java.lang.Double getLineY1(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y1 property of Line.
  
  Specified by:
  
  getLineY1 in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y1 property.
- getLineY2
  
  public java.lang.Double getLineY2(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y2 property of Line.
  
  Specified by:
  
  getLineY2 in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y2 property.
- getListAnnotationAnnotationRef
  
  public java.lang.String getListAnnotationAnnotationRef(int listAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of ListAnnotation.
  
  Specified by:
  
  getListAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  listAnnotationIndex - the ListAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getListAnnotationAnnotator
  
  public java.lang.String getListAnnotationAnnotator(int listAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of ListAnnotation.
  
  Specified by:
  
  getListAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  listAnnotationIndex - the ListAnnotation index.
  
  Returns:
  
  the Annotator property.
- getListAnnotationDescription
  
  public java.lang.String getListAnnotationDescription(int listAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of ListAnnotation.
  
  Specified by:
  
  getListAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  listAnnotationIndex - the ListAnnotation index.
  
  Returns:
  
  the Description property.
- getListAnnotationID
  
  public java.lang.String getListAnnotationID(int listAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of ListAnnotation.
  
  Specified by:
  
  getListAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  listAnnotationIndex - the ListAnnotation index.
  
  Returns:
  
  the ID property.
- getListAnnotationNamespace
  
  public java.lang.String getListAnnotationNamespace(int listAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of ListAnnotation.
  
  Specified by:
  
  getListAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  listAnnotationIndex - the ListAnnotation index.
  
  Returns:
  
  the Namespace property.
- getLongAnnotationAnnotationRef
  
  public java.lang.String getLongAnnotationAnnotationRef(int longAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of LongAnnotation.
  
  Specified by:
  
  getLongAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getLongAnnotationAnnotator
  
  public java.lang.String getLongAnnotationAnnotator(int longAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of LongAnnotation.
  
  Specified by:
  
  getLongAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  Returns:
  
  the Annotator property.
- getLongAnnotationDescription
  
  public java.lang.String getLongAnnotationDescription(int longAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of LongAnnotation.
  
  Specified by:
  
  getLongAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  Returns:
  
  the Description property.
- getLongAnnotationID
  
  public java.lang.String getLongAnnotationID(int longAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of LongAnnotation.
  
  Specified by:
  
  getLongAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  Returns:
  
  the ID property.
- getLongAnnotationNamespace
  
  public java.lang.String getLongAnnotationNamespace(int longAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of LongAnnotation.
  
  Specified by:
  
  getLongAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  Returns:
  
  the Namespace property.
- getLongAnnotationValue
  
  public java.lang.Long getLongAnnotationValue(int longAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of LongAnnotation.
  
  Specified by:
  
  getLongAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  longAnnotationIndex - the LongAnnotation index.
  
  Returns:
  
  the Value property.
- getMapAnnotationAnnotationRef
  
  public java.lang.String getMapAnnotationAnnotationRef(int mapAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of MapAnnotation.
  
  Specified by:
  
  getMapAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getMapAnnotationAnnotator
  
  public java.lang.String getMapAnnotationAnnotator(int mapAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of MapAnnotation.
  
  Specified by:
  
  getMapAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  Returns:
  
  the Annotator property.
- getMapAnnotationDescription
  
  public java.lang.String getMapAnnotationDescription(int mapAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of MapAnnotation.
  
  Specified by:
  
  getMapAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  Returns:
  
  the Description property.
- getMapAnnotationID
  
  public java.lang.String getMapAnnotationID(int mapAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of MapAnnotation.
  
  Specified by:
  
  getMapAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  Returns:
  
  the ID property.
- getMapAnnotationNamespace
  
  public java.lang.String getMapAnnotationNamespace(int mapAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of MapAnnotation.
  
  Specified by:
  
  getMapAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  mapAnnotationIndex - the MapAnnotation index.
  
  Returns:
  
  the Namespace property.
- getMaskAnnotationRef
  
  public java.lang.String getMaskAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Mask.
  
  Specified by:
  
  getMaskAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getMaskFillColor
  
  public Color getMaskFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Mask.
  
  Specified by:
  
  getMaskFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getMaskFillRule
  
  public FillRule getMaskFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Mask.
  
  Specified by:
  
  getMaskFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getMaskFontFamily
  
  public FontFamily getMaskFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Mask.
  
  Specified by:
  
  getMaskFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getMaskFontSize
  
  public Length getMaskFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Mask.
  
  Specified by:
  
  getMaskFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getMaskFontStyle
  
  public FontStyle getMaskFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Mask.
  
  Specified by:
  
  getMaskFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getMaskHeight
  
  public java.lang.Double getMaskHeight(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Height property of Mask.
  
  Specified by:
  
  getMaskHeight in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Height property.
- getMaskID
  
  public java.lang.String getMaskID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Mask.
  
  Specified by:
  
  getMaskID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getMaskLocked
  
  public java.lang.Boolean getMaskLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Mask.
  
  Specified by:
  
  getMaskLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getMaskStrokeColor
  
  public Color getMaskStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Mask.
  
  Specified by:
  
  getMaskStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getMaskStrokeDashArray
  
  public java.lang.String getMaskStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Mask.
  
  Specified by:
  
  getMaskStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getMaskStrokeWidth
  
  public Length getMaskStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Mask.
  
  Specified by:
  
  getMaskStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getMaskText
  
  public java.lang.String getMaskText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Mask.
  
  Specified by:
  
  getMaskText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getMaskTheC
  
  public NonNegativeInteger getMaskTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Mask.
  
  Specified by:
  
  getMaskTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getMaskTheT
  
  public NonNegativeInteger getMaskTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Mask.
  
  Specified by:
  
  getMaskTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getMaskTheZ
  
  public NonNegativeInteger getMaskTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Mask.
  
  Specified by:
  
  getMaskTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getMaskTransform
  
  public AffineTransform getMaskTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Mask.
  
  Specified by:
  
  getMaskTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getMaskWidth
  
  public java.lang.Double getMaskWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Width property of Mask.
  
  Specified by:
  
  getMaskWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Width property.
- getMaskX
  
  public java.lang.Double getMaskX(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X property of Mask.
  
  Specified by:
  
  getMaskX in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X property.
- getMaskY
  
  public java.lang.Double getMaskY(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y property of Mask.
  
  Specified by:
  
  getMaskY in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y property.
- getMicrobeamManipulationDescription
  
  public java.lang.String getMicrobeamManipulationDescription(int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationDescription in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  Returns:
  
  the Description property.
- getMicrobeamManipulationExperimenterRef
  
  public java.lang.String getMicrobeamManipulationExperimenterRef(int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterRef property of MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationExperimenterRef in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  Returns:
  
  the ExperimenterRef property.
- getMicrobeamManipulationID
  
  public java.lang.String getMicrobeamManipulationID(int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationID in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  Returns:
  
  the ID property.
- getMicrobeamManipulationROIRef
  
  public java.lang.String getMicrobeamManipulationROIRef(int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ROIRef property of MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationROIRef in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  ROIRefIndex - ROIRef index.
  
  Returns:
  
  the ROIRef property.
- getMicrobeamManipulationType
  
  public MicrobeamManipulationType getMicrobeamManipulationType(int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of MicrobeamManipulation.
  
  Specified by:
  
  getMicrobeamManipulationType in interface MetadataRetrieve
  
  Parameters:
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  Returns:
  
  the Type property.
- getMicroscopeLotNumber
  
  public java.lang.String getMicroscopeLotNumber(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Microscope.
  
  Specified by:
  
  getMicroscopeLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the LotNumber property.
- getMicroscopeManufacturer
  
  public java.lang.String getMicroscopeManufacturer(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Microscope.
  
  Specified by:
  
  getMicroscopeManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the Manufacturer property.
- getMicroscopeModel
  
  public java.lang.String getMicroscopeModel(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Microscope.
  
  Specified by:
  
  getMicroscopeModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the Model property.
- getMicroscopeSerialNumber
  
  public java.lang.String getMicroscopeSerialNumber(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Microscope.
  
  Specified by:
  
  getMicroscopeSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the SerialNumber property.
- getMicroscopeType
  
  public MicroscopeType getMicroscopeType(int instrumentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Microscope.
  
  Specified by:
  
  getMicroscopeType in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  Returns:
  
  the Type property.
- getObjectiveAnnotationRef
  
  public java.lang.String getObjectiveAnnotationRef(int instrumentIndex, int objectiveIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Objective.
  
  Specified by:
  
  getObjectiveAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getObjectiveCalibratedMagnification
  
  public java.lang.Double getObjectiveCalibratedMagnification(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CalibratedMagnification property of Objective.
  
  Specified by:
  
  getObjectiveCalibratedMagnification in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the CalibratedMagnification property.
- getObjectiveCorrection
  
  public Correction getObjectiveCorrection(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Correction property of Objective.
  
  Specified by:
  
  getObjectiveCorrection in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the Correction property.
- getObjectiveID
  
  public java.lang.String getObjectiveID(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Objective.
  
  Specified by:
  
  getObjectiveID in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the ID property.
- getObjectiveImmersion
  
  public Immersion getObjectiveImmersion(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Immersion property of Objective.
  
  Specified by:
  
  getObjectiveImmersion in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the Immersion property.
- getObjectiveIris
  
  public java.lang.Boolean getObjectiveIris(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Iris property of Objective.
  
  Specified by:
  
  getObjectiveIris in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the Iris property.
- getObjectiveLensNA
  
  public java.lang.Double getObjectiveLensNA(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LensNA property of Objective.
  
  Specified by:
  
  getObjectiveLensNA in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the LensNA property.
- getObjectiveLotNumber
  
  public java.lang.String getObjectiveLotNumber(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the LotNumber property of Objective.
  
  Specified by:
  
  getObjectiveLotNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the LotNumber property.
- getObjectiveManufacturer
  
  public java.lang.String getObjectiveManufacturer(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Manufacturer property of Objective.
  
  Specified by:
  
  getObjectiveManufacturer in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the Manufacturer property.
- getObjectiveModel
  
  public java.lang.String getObjectiveModel(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Model property of Objective.
  
  Specified by:
  
  getObjectiveModel in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the Model property.
- getObjectiveNominalMagnification
  
  public java.lang.Double getObjectiveNominalMagnification(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the NominalMagnification property of Objective.
  
  Specified by:
  
  getObjectiveNominalMagnification in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the NominalMagnification property.
- getObjectiveSerialNumber
  
  public java.lang.String getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SerialNumber property of Objective.
  
  Specified by:
  
  getObjectiveSerialNumber in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the SerialNumber property.
- getObjectiveWorkingDistance
  
  public Length getObjectiveWorkingDistance(int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the WorkingDistance property of Objective.
  
  Specified by:
  
  getObjectiveWorkingDistance in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  Returns:
  
  the WorkingDistance property.
- getObjectiveSettingsCorrectionCollar
  
  public java.lang.Double getObjectiveSettingsCorrectionCollar(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CorrectionCollar property of ObjectiveSettings.
  
  Specified by:
  
  getObjectiveSettingsCorrectionCollar in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the CorrectionCollar property.
- getObjectiveSettingsID
  
  public java.lang.String getObjectiveSettingsID(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of ObjectiveSettings.
  
  Specified by:
  
  getObjectiveSettingsID in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the ID property.
- getObjectiveSettingsMedium
  
  public Medium getObjectiveSettingsMedium(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Medium property of ObjectiveSettings.
  
  Specified by:
  
  getObjectiveSettingsMedium in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Medium property.
- getObjectiveSettingsRefractiveIndex
  
  public java.lang.Double getObjectiveSettingsRefractiveIndex(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the RefractiveIndex property of ObjectiveSettings.
  
  Specified by:
  
  getObjectiveSettingsRefractiveIndex in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the RefractiveIndex property.
- getPixelsBigEndian
  
  public java.lang.Boolean getPixelsBigEndian(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the BigEndian property of Pixels.
  
  Specified by:
  
  getPixelsBigEndian in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the BigEndian property.
- getPixelsDimensionOrder
  
  public DimensionOrder getPixelsDimensionOrder(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the DimensionOrder property of Pixels.
  
  Specified by:
  
  getPixelsDimensionOrder in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the DimensionOrder property.
- getPixelsID
  
  public java.lang.String getPixelsID(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Pixels.
  
  Specified by:
  
  getPixelsID in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the ID property.
- getPixelsInterleaved
  
  public java.lang.Boolean getPixelsInterleaved(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Interleaved property of Pixels.
  
  Specified by:
  
  getPixelsInterleaved in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Interleaved property.
- getPixelsPhysicalSizeX
  
  public Length getPixelsPhysicalSizeX(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PhysicalSizeX property of Pixels.
  
  Specified by:
  
  getPixelsPhysicalSizeX in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the PhysicalSizeX property.
- getPixelsPhysicalSizeY
  
  public Length getPixelsPhysicalSizeY(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PhysicalSizeY property of Pixels.
  
  Specified by:
  
  getPixelsPhysicalSizeY in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the PhysicalSizeY property.
- getPixelsPhysicalSizeZ
  
  public Length getPixelsPhysicalSizeZ(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PhysicalSizeZ property of Pixels.
  
  Specified by:
  
  getPixelsPhysicalSizeZ in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the PhysicalSizeZ property.
- getPixelsSignificantBits
  
  public PositiveInteger getPixelsSignificantBits(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SignificantBits property of Pixels.
  
  Specified by:
  
  getPixelsSignificantBits in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the SignificantBits property.
- getPixelsSizeC
  
  public PositiveInteger getPixelsSizeC(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SizeC property of Pixels.
  
  Specified by:
  
  getPixelsSizeC in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the SizeC property.
- getPixelsSizeT
  
  public PositiveInteger getPixelsSizeT(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SizeT property of Pixels.
  
  Specified by:
  
  getPixelsSizeT in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the SizeT property.
- getPixelsSizeX
  
  public PositiveInteger getPixelsSizeX(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SizeX property of Pixels.
  
  Specified by:
  
  getPixelsSizeX in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the SizeX property.
- getPixelsSizeY
  
  public PositiveInteger getPixelsSizeY(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SizeY property of Pixels.
  
  Specified by:
  
  getPixelsSizeY in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the SizeY property.
- getPixelsSizeZ
  
  public PositiveInteger getPixelsSizeZ(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the SizeZ property of Pixels.
  
  Specified by:
  
  getPixelsSizeZ in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the SizeZ property.
- getPixelsTimeIncrement
  
  public Time getPixelsTimeIncrement(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TimeIncrement property of Pixels.
  
  Specified by:
  
  getPixelsTimeIncrement in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the TimeIncrement property.
- getPixelsType
  
  public PixelType getPixelsType(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Pixels.
  
  Specified by:
  
  getPixelsType in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Type property.
- getPlaneAnnotationRef
  
  public java.lang.String getPlaneAnnotationRef(int imageIndex, int planeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Plane.
  
  Specified by:
  
  getPlaneAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getPlaneDeltaT
  
  public Time getPlaneDeltaT(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the DeltaT property of Plane.
  
  Specified by:
  
  getPlaneDeltaT in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the DeltaT property.
- getPlaneExposureTime
  
  public Time getPlaneExposureTime(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExposureTime property of Plane.
  
  Specified by:
  
  getPlaneExposureTime in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the ExposureTime property.
- getPlaneHashSHA1
  
  public java.lang.String getPlaneHashSHA1(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the HashSHA1 property of Plane.
  
  Specified by:
  
  getPlaneHashSHA1 in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the HashSHA1 property.
- getPlanePositionX
  
  public Length getPlanePositionX(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PositionX property of Plane.
  
  Specified by:
  
  getPlanePositionX in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the PositionX property.
- getPlanePositionY
  
  public Length getPlanePositionY(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PositionY property of Plane.
  
  Specified by:
  
  getPlanePositionY in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the PositionY property.
- getPlanePositionZ
  
  public Length getPlanePositionZ(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PositionZ property of Plane.
  
  Specified by:
  
  getPlanePositionZ in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the PositionZ property.
- getPlaneTheC
  
  public NonNegativeInteger getPlaneTheC(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Plane.
  
  Specified by:
  
  getPlaneTheC in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the TheC property.
- getPlaneTheT
  
  public NonNegativeInteger getPlaneTheT(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Plane.
  
  Specified by:
  
  getPlaneTheT in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the TheT property.
- getPlaneTheZ
  
  public NonNegativeInteger getPlaneTheZ(int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Plane.
  
  Specified by:
  
  getPlaneTheZ in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  Returns:
  
  the TheZ property.
- getPlateAnnotationRef
  
  public java.lang.String getPlateAnnotationRef(int plateIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Plate.
  
  Specified by:
  
  getPlateAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getPlateColumnNamingConvention
  
  public NamingConvention getPlateColumnNamingConvention(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ColumnNamingConvention property of Plate.
  
  Specified by:
  
  getPlateColumnNamingConvention in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the ColumnNamingConvention property.
- getPlateColumns
  
  public PositiveInteger getPlateColumns(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Columns property of Plate.
  
  Specified by:
  
  getPlateColumns in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the Columns property.
- getPlateDescription
  
  public java.lang.String getPlateDescription(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Plate.
  
  Specified by:
  
  getPlateDescription in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the Description property.
- getPlateExternalIdentifier
  
  public java.lang.String getPlateExternalIdentifier(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExternalIdentifier property of Plate.
  
  Specified by:
  
  getPlateExternalIdentifier in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the ExternalIdentifier property.
- getPlateFieldIndex
  
  public NonNegativeInteger getPlateFieldIndex(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FieldIndex property of Plate.
  
  Specified by:
  
  getPlateFieldIndex in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the FieldIndex property.
- getPlateID
  
  public java.lang.String getPlateID(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Plate.
  
  Specified by:
  
  getPlateID in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the ID property.
- getPlateName
  
  public java.lang.String getPlateName(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Plate.
  
  Specified by:
  
  getPlateName in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the Name property.
- getPlateRowNamingConvention
  
  public NamingConvention getPlateRowNamingConvention(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the RowNamingConvention property of Plate.
  
  Specified by:
  
  getPlateRowNamingConvention in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the RowNamingConvention property.
- getPlateRows
  
  public PositiveInteger getPlateRows(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Rows property of Plate.
  
  Specified by:
  
  getPlateRows in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the Rows property.
- getPlateStatus
  
  public java.lang.String getPlateStatus(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Status property of Plate.
  
  Specified by:
  
  getPlateStatus in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the Status property.
- getPlateWellOriginX
  
  public Length getPlateWellOriginX(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the WellOriginX property of Plate.
  
  Specified by:
  
  getPlateWellOriginX in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the WellOriginX property.
- getPlateWellOriginY
  
  public Length getPlateWellOriginY(int plateIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the WellOriginY property of Plate.
  
  Specified by:
  
  getPlateWellOriginY in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  Returns:
  
  the WellOriginY property.
- getPlateAcquisitionAnnotationRef
  
  public java.lang.String getPlateAcquisitionAnnotationRef(int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getPlateAcquisitionDescription
  
  public java.lang.String getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionDescription in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the Description property.
- getPlateAcquisitionEndTime
  
  public Timestamp getPlateAcquisitionEndTime(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the EndTime property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionEndTime in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the EndTime property.
- getPlateAcquisitionID
  
  public java.lang.String getPlateAcquisitionID(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionID in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the ID property.
- getPlateAcquisitionMaximumFieldCount
  
  public PositiveInteger getPlateAcquisitionMaximumFieldCount(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MaximumFieldCount property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionMaximumFieldCount in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the MaximumFieldCount property.
- getPlateAcquisitionName
  
  public java.lang.String getPlateAcquisitionName(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionName in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the Name property.
- getPlateAcquisitionStartTime
  
  public Timestamp getPlateAcquisitionStartTime(int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StartTime property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionStartTime in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  Returns:
  
  the StartTime property.
- getPlateAcquisitionWellSampleRef
  
  public java.lang.String getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the WellSampleRef property of PlateAcquisition.
  
  Specified by:
  
  getPlateAcquisitionWellSampleRef in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  wellSampleRefIndex - WellSampleRef index.
  
  Returns:
  
  the WellSampleRef property.
- getPointAnnotationRef
  
  public java.lang.String getPointAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Point.
  
  Specified by:
  
  getPointAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getPointFillColor
  
  public Color getPointFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Point.
  
  Specified by:
  
  getPointFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getPointFillRule
  
  public FillRule getPointFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Point.
  
  Specified by:
  
  getPointFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getPointFontFamily
  
  public FontFamily getPointFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Point.
  
  Specified by:
  
  getPointFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getPointFontSize
  
  public Length getPointFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Point.
  
  Specified by:
  
  getPointFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getPointFontStyle
  
  public FontStyle getPointFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Point.
  
  Specified by:
  
  getPointFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getPointID
  
  public java.lang.String getPointID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Point.
  
  Specified by:
  
  getPointID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getPointLocked
  
  public java.lang.Boolean getPointLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Point.
  
  Specified by:
  
  getPointLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getPointStrokeColor
  
  public Color getPointStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Point.
  
  Specified by:
  
  getPointStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getPointStrokeDashArray
  
  public java.lang.String getPointStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Point.
  
  Specified by:
  
  getPointStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getPointStrokeWidth
  
  public Length getPointStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Point.
  
  Specified by:
  
  getPointStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getPointText
  
  public java.lang.String getPointText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Point.
  
  Specified by:
  
  getPointText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getPointTheC
  
  public NonNegativeInteger getPointTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Point.
  
  Specified by:
  
  getPointTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getPointTheT
  
  public NonNegativeInteger getPointTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Point.
  
  Specified by:
  
  getPointTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getPointTheZ
  
  public NonNegativeInteger getPointTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Point.
  
  Specified by:
  
  getPointTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getPointTransform
  
  public AffineTransform getPointTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Point.
  
  Specified by:
  
  getPointTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getPointX
  
  public java.lang.Double getPointX(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X property of Point.
  
  Specified by:
  
  getPointX in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X property.
- getPointY
  
  public java.lang.Double getPointY(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y property of Point.
  
  Specified by:
  
  getPointY in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y property.
- getPolygonAnnotationRef
  
  public java.lang.String getPolygonAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Polygon.
  
  Specified by:
  
  getPolygonAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getPolygonFillColor
  
  public Color getPolygonFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Polygon.
  
  Specified by:
  
  getPolygonFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getPolygonFillRule
  
  public FillRule getPolygonFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Polygon.
  
  Specified by:
  
  getPolygonFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getPolygonFontFamily
  
  public FontFamily getPolygonFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Polygon.
  
  Specified by:
  
  getPolygonFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getPolygonFontSize
  
  public Length getPolygonFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Polygon.
  
  Specified by:
  
  getPolygonFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getPolygonFontStyle
  
  public FontStyle getPolygonFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Polygon.
  
  Specified by:
  
  getPolygonFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getPolygonID
  
  public java.lang.String getPolygonID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Polygon.
  
  Specified by:
  
  getPolygonID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getPolygonLocked
  
  public java.lang.Boolean getPolygonLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Polygon.
  
  Specified by:
  
  getPolygonLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getPolygonPoints
  
  public java.lang.String getPolygonPoints(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Points property of Polygon.
  
  Specified by:
  
  getPolygonPoints in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Points property.
- getPolygonStrokeColor
  
  public Color getPolygonStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Polygon.
  
  Specified by:
  
  getPolygonStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getPolygonStrokeDashArray
  
  public java.lang.String getPolygonStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Polygon.
  
  Specified by:
  
  getPolygonStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getPolygonStrokeWidth
  
  public Length getPolygonStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Polygon.
  
  Specified by:
  
  getPolygonStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getPolygonText
  
  public java.lang.String getPolygonText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Polygon.
  
  Specified by:
  
  getPolygonText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getPolygonTheC
  
  public NonNegativeInteger getPolygonTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Polygon.
  
  Specified by:
  
  getPolygonTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getPolygonTheT
  
  public NonNegativeInteger getPolygonTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Polygon.
  
  Specified by:
  
  getPolygonTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getPolygonTheZ
  
  public NonNegativeInteger getPolygonTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Polygon.
  
  Specified by:
  
  getPolygonTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getPolygonTransform
  
  public AffineTransform getPolygonTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Polygon.
  
  Specified by:
  
  getPolygonTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getPolylineAnnotationRef
  
  public java.lang.String getPolylineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Polyline.
  
  Specified by:
  
  getPolylineAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getPolylineFillColor
  
  public Color getPolylineFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Polyline.
  
  Specified by:
  
  getPolylineFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getPolylineFillRule
  
  public FillRule getPolylineFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Polyline.
  
  Specified by:
  
  getPolylineFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getPolylineFontFamily
  
  public FontFamily getPolylineFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Polyline.
  
  Specified by:
  
  getPolylineFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getPolylineFontSize
  
  public Length getPolylineFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Polyline.
  
  Specified by:
  
  getPolylineFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getPolylineFontStyle
  
  public FontStyle getPolylineFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Polyline.
  
  Specified by:
  
  getPolylineFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getPolylineID
  
  public java.lang.String getPolylineID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Polyline.
  
  Specified by:
  
  getPolylineID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getPolylineLocked
  
  public java.lang.Boolean getPolylineLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Polyline.
  
  Specified by:
  
  getPolylineLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getPolylineMarkerEnd
  
  public Marker getPolylineMarkerEnd(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MarkerEnd property of Polyline.
  
  Specified by:
  
  getPolylineMarkerEnd in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the MarkerEnd property.
- getPolylineMarkerStart
  
  public Marker getPolylineMarkerStart(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the MarkerStart property of Polyline.
  
  Specified by:
  
  getPolylineMarkerStart in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the MarkerStart property.
- getPolylinePoints
  
  public java.lang.String getPolylinePoints(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Points property of Polyline.
  
  Specified by:
  
  getPolylinePoints in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Points property.
- getPolylineStrokeColor
  
  public Color getPolylineStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Polyline.
  
  Specified by:
  
  getPolylineStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getPolylineStrokeDashArray
  
  public java.lang.String getPolylineStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Polyline.
  
  Specified by:
  
  getPolylineStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getPolylineStrokeWidth
  
  public Length getPolylineStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Polyline.
  
  Specified by:
  
  getPolylineStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getPolylineText
  
  public java.lang.String getPolylineText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Polyline.
  
  Specified by:
  
  getPolylineText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getPolylineTheC
  
  public NonNegativeInteger getPolylineTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Polyline.
  
  Specified by:
  
  getPolylineTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getPolylineTheT
  
  public NonNegativeInteger getPolylineTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Polyline.
  
  Specified by:
  
  getPolylineTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getPolylineTheZ
  
  public NonNegativeInteger getPolylineTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Polyline.
  
  Specified by:
  
  getPolylineTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getPolylineTransform
  
  public AffineTransform getPolylineTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Polyline.
  
  Specified by:
  
  getPolylineTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getProjectAnnotationRef
  
  public java.lang.String getProjectAnnotationRef(int projectIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Project.
  
  Specified by:
  
  getProjectAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getProjectDatasetRef
  
  public java.lang.String getProjectDatasetRef(int projectIndex, int datasetRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the DatasetRef property of Project.
  
  Specified by:
  
  getProjectDatasetRef in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  datasetRefIndex - DatasetRef index.
  
  Returns:
  
  the DatasetRef property.
- getProjectDescription
  
  public java.lang.String getProjectDescription(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Project.
  
  Specified by:
  
  getProjectDescription in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the Description property.
- getProjectExperimenterGroupRef
  
  public java.lang.String getProjectExperimenterGroupRef(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterGroupRef property of Project.
  
  Specified by:
  
  getProjectExperimenterGroupRef in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the ExperimenterGroupRef property.
- getProjectExperimenterRef
  
  public java.lang.String getProjectExperimenterRef(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExperimenterRef property of Project.
  
  Specified by:
  
  getProjectExperimenterRef in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the ExperimenterRef property.
- getProjectID
  
  public java.lang.String getProjectID(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Project.
  
  Specified by:
  
  getProjectID in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the ID property.
- getProjectName
  
  public java.lang.String getProjectName(int projectIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Project.
  
  Specified by:
  
  getProjectName in interface MetadataRetrieve
  
  Parameters:
  
  projectIndex - the Project index.
  
  Returns:
  
  the Name property.
- getROIAnnotationRef
  
  public java.lang.String getROIAnnotationRef(int ROIIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of ROI.
  
  Specified by:
  
  getROIAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getROIDescription
  
  public java.lang.String getROIDescription(int ROIIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of ROI.
  
  Specified by:
  
  getROIDescription in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  Returns:
  
  the Description property.
- getROIID
  
  public java.lang.String getROIID(int ROIIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of ROI.
  
  Specified by:
  
  getROIID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  Returns:
  
  the ID property.
- getROIName
  
  public java.lang.String getROIName(int ROIIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of ROI.
  
  Specified by:
  
  getROIName in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  Returns:
  
  the Name property.
- getReagentAnnotationRef
  
  public java.lang.String getReagentAnnotationRef(int screenIndex, int reagentIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Reagent.
  
  Specified by:
  
  getReagentAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getReagentDescription
  
  public java.lang.String getReagentDescription(int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Reagent.
  
  Specified by:
  
  getReagentDescription in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  Returns:
  
  the Description property.
- getReagentID
  
  public java.lang.String getReagentID(int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Reagent.
  
  Specified by:
  
  getReagentID in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  Returns:
  
  the ID property.
- getReagentName
  
  public java.lang.String getReagentName(int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Reagent.
  
  Specified by:
  
  getReagentName in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  Returns:
  
  the Name property.
- getReagentReagentIdentifier
  
  public java.lang.String getReagentReagentIdentifier(int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ReagentIdentifier property of Reagent.
  
  Specified by:
  
  getReagentReagentIdentifier in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  Returns:
  
  the ReagentIdentifier property.
- getRectangleAnnotationRef
  
  public java.lang.String getRectangleAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Rectangle.
  
  Specified by:
  
  getRectangleAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getRectangleFillColor
  
  public Color getRectangleFillColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillColor property of Rectangle.
  
  Specified by:
  
  getRectangleFillColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillColor property.
- getRectangleFillRule
  
  public FillRule getRectangleFillRule(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FillRule property of Rectangle.
  
  Specified by:
  
  getRectangleFillRule in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FillRule property.
- getRectangleFontFamily
  
  public FontFamily getRectangleFontFamily(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontFamily property of Rectangle.
  
  Specified by:
  
  getRectangleFontFamily in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontFamily property.
- getRectangleFontSize
  
  public Length getRectangleFontSize(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontSize property of Rectangle.
  
  Specified by:
  
  getRectangleFontSize in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontSize property.
- getRectangleFontStyle
  
  public FontStyle getRectangleFontStyle(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FontStyle property of Rectangle.
  
  Specified by:
  
  getRectangleFontStyle in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the FontStyle property.
- getRectangleHeight
  
  public java.lang.Double getRectangleHeight(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Height property of Rectangle.
  
  Specified by:
  
  getRectangleHeight in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Height property.
- getRectangleID
  
  public java.lang.String getRectangleID(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Rectangle.
  
  Specified by:
  
  getRectangleID in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the ID property.
- getRectangleLocked
  
  public java.lang.Boolean getRectangleLocked(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Locked property of Rectangle.
  
  Specified by:
  
  getRectangleLocked in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Locked property.
- getRectangleStrokeColor
  
  public Color getRectangleStrokeColor(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeColor property of Rectangle.
  
  Specified by:
  
  getRectangleStrokeColor in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeColor property.
- getRectangleStrokeDashArray
  
  public java.lang.String getRectangleStrokeDashArray(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeDashArray property of Rectangle.
  
  Specified by:
  
  getRectangleStrokeDashArray in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeDashArray property.
- getRectangleStrokeWidth
  
  public Length getRectangleStrokeWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the StrokeWidth property of Rectangle.
  
  Specified by:
  
  getRectangleStrokeWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the StrokeWidth property.
- getRectangleText
  
  public java.lang.String getRectangleText(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Text property of Rectangle.
  
  Specified by:
  
  getRectangleText in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Text property.
- getRectangleTheC
  
  public NonNegativeInteger getRectangleTheC(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheC property of Rectangle.
  
  Specified by:
  
  getRectangleTheC in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheC property.
- getRectangleTheT
  
  public NonNegativeInteger getRectangleTheT(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheT property of Rectangle.
  
  Specified by:
  
  getRectangleTheT in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheT property.
- getRectangleTheZ
  
  public NonNegativeInteger getRectangleTheZ(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the TheZ property of Rectangle.
  
  Specified by:
  
  getRectangleTheZ in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the TheZ property.
- getRectangleTransform
  
  public AffineTransform getRectangleTransform(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transform property of Rectangle.
  
  Specified by:
  
  getRectangleTransform in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Transform property.
- getRectangleWidth
  
  public java.lang.Double getRectangleWidth(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Width property of Rectangle.
  
  Specified by:
  
  getRectangleWidth in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Width property.
- getRectangleX
  
  public java.lang.Double getRectangleX(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X property of Rectangle.
  
  Specified by:
  
  getRectangleX in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the X property.
- getRectangleY
  
  public java.lang.Double getRectangleY(int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y property of Rectangle.
  
  Specified by:
  
  getRectangleY in interface MetadataRetrieve
  
  Parameters:
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  Returns:
  
  the Y property.
- getRightsRightsHeld
  
  public java.lang.String getRightsRightsHeld()
  
  Description copied from interface: MetadataRetrieve
  
  Get the RightsHeld property of Rights.
  
  Specified by:
  
  getRightsRightsHeld in interface MetadataRetrieve
  
  Returns:
  
  the RightsHeld property.
- getRightsRightsHolder
  
  public java.lang.String getRightsRightsHolder()
  
  Description copied from interface: MetadataRetrieve
  
  Get the RightsHolder property of Rights.
  
  Specified by:
  
  getRightsRightsHolder in interface MetadataRetrieve
  
  Returns:
  
  the RightsHolder property.
- getScreenAnnotationRef
  
  public java.lang.String getScreenAnnotationRef(int screenIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Screen.
  
  Specified by:
  
  getScreenAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getScreenDescription
  
  public java.lang.String getScreenDescription(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of Screen.
  
  Specified by:
  
  getScreenDescription in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the Description property.
- getScreenID
  
  public java.lang.String getScreenID(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Screen.
  
  Specified by:
  
  getScreenID in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the ID property.
- getScreenName
  
  public java.lang.String getScreenName(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of Screen.
  
  Specified by:
  
  getScreenName in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the Name property.
- getScreenPlateRef
  
  public java.lang.String getScreenPlateRef(int screenIndex, int plateRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PlateRef property of Screen.
  
  Specified by:
  
  getScreenPlateRef in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  plateRefIndex - PlateRef index.
  
  Returns:
  
  the PlateRef property.
- getScreenProtocolDescription
  
  public java.lang.String getScreenProtocolDescription(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ProtocolDescription property of Screen.
  
  Specified by:
  
  getScreenProtocolDescription in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the ProtocolDescription property.
- getScreenProtocolIdentifier
  
  public java.lang.String getScreenProtocolIdentifier(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ProtocolIdentifier property of Screen.
  
  Specified by:
  
  getScreenProtocolIdentifier in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the ProtocolIdentifier property.
- getScreenReagentSetDescription
  
  public java.lang.String getScreenReagentSetDescription(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ReagentSetDescription property of Screen.
  
  Specified by:
  
  getScreenReagentSetDescription in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the ReagentSetDescription property.
- getScreenReagentSetIdentifier
  
  public java.lang.String getScreenReagentSetIdentifier(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ReagentSetIdentifier property of Screen.
  
  Specified by:
  
  getScreenReagentSetIdentifier in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the ReagentSetIdentifier property.
- getScreenType
  
  public java.lang.String getScreenType(int screenIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Screen.
  
  Specified by:
  
  getScreenType in interface MetadataRetrieve
  
  Parameters:
  
  screenIndex - the Screen index.
  
  Returns:
  
  the Type property.
- getStageLabelName
  
  public java.lang.String getStageLabelName(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Name property of StageLabel.
  
  Specified by:
  
  getStageLabelName in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Name property.
- getStageLabelX
  
  public Length getStageLabelX(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the X property of StageLabel.
  
  Specified by:
  
  getStageLabelX in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the X property.
- getStageLabelY
  
  public Length getStageLabelY(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Y property of StageLabel.
  
  Specified by:
  
  getStageLabelY in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Y property.
- getStageLabelZ
  
  public Length getStageLabelZ(int imageIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Z property of StageLabel.
  
  Specified by:
  
  getStageLabelZ in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  Returns:
  
  the Z property.
- getTagAnnotationAnnotationRef
  
  public java.lang.String getTagAnnotationAnnotationRef(int tagAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of TagAnnotation.
  
  Specified by:
  
  getTagAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getTagAnnotationAnnotator
  
  public java.lang.String getTagAnnotationAnnotator(int tagAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of TagAnnotation.
  
  Specified by:
  
  getTagAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  Returns:
  
  the Annotator property.
- getTagAnnotationDescription
  
  public java.lang.String getTagAnnotationDescription(int tagAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of TagAnnotation.
  
  Specified by:
  
  getTagAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  Returns:
  
  the Description property.
- getTagAnnotationID
  
  public java.lang.String getTagAnnotationID(int tagAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of TagAnnotation.
  
  Specified by:
  
  getTagAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  Returns:
  
  the ID property.
- getTagAnnotationNamespace
  
  public java.lang.String getTagAnnotationNamespace(int tagAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of TagAnnotation.
  
  Specified by:
  
  getTagAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  Returns:
  
  the Namespace property.
- getTagAnnotationValue
  
  public java.lang.String getTagAnnotationValue(int tagAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of TagAnnotation.
  
  Specified by:
  
  getTagAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  tagAnnotationIndex - the TagAnnotation index.
  
  Returns:
  
  the Value property.
- getTermAnnotationAnnotationRef
  
  public java.lang.String getTermAnnotationAnnotationRef(int termAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of TermAnnotation.
  
  Specified by:
  
  getTermAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getTermAnnotationAnnotator
  
  public java.lang.String getTermAnnotationAnnotator(int termAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of TermAnnotation.
  
  Specified by:
  
  getTermAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  Returns:
  
  the Annotator property.
- getTermAnnotationDescription
  
  public java.lang.String getTermAnnotationDescription(int termAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of TermAnnotation.
  
  Specified by:
  
  getTermAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  Returns:
  
  the Description property.
- getTermAnnotationID
  
  public java.lang.String getTermAnnotationID(int termAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of TermAnnotation.
  
  Specified by:
  
  getTermAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  Returns:
  
  the ID property.
- getTermAnnotationNamespace
  
  public java.lang.String getTermAnnotationNamespace(int termAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of TermAnnotation.
  
  Specified by:
  
  getTermAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  Returns:
  
  the Namespace property.
- getTermAnnotationValue
  
  public java.lang.String getTermAnnotationValue(int termAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of TermAnnotation.
  
  Specified by:
  
  getTermAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  termAnnotationIndex - the TermAnnotation index.
  
  Returns:
  
  the Value property.
- getTiffDataFirstC
  
  public NonNegativeInteger getTiffDataFirstC(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FirstC property of TiffData.
  
  Specified by:
  
  getTiffDataFirstC in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the FirstC property.
- getTiffDataFirstT
  
  public NonNegativeInteger getTiffDataFirstT(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FirstT property of TiffData.
  
  Specified by:
  
  getTiffDataFirstT in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the FirstT property.
- getTiffDataFirstZ
  
  public NonNegativeInteger getTiffDataFirstZ(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FirstZ property of TiffData.
  
  Specified by:
  
  getTiffDataFirstZ in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the FirstZ property.
- getTiffDataIFD
  
  public NonNegativeInteger getTiffDataIFD(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the IFD property of TiffData.
  
  Specified by:
  
  getTiffDataIFD in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the IFD property.
- getTiffDataPlaneCount
  
  public NonNegativeInteger getTiffDataPlaneCount(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PlaneCount property of TiffData.
  
  Specified by:
  
  getTiffDataPlaneCount in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the PlaneCount property.
- getTimestampAnnotationAnnotationRef
  
  public java.lang.String getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of TimestampAnnotation.
  
  Specified by:
  
  getTimestampAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getTimestampAnnotationAnnotator
  
  public java.lang.String getTimestampAnnotationAnnotator(int timestampAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of TimestampAnnotation.
  
  Specified by:
  
  getTimestampAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  Returns:
  
  the Annotator property.
- getTimestampAnnotationDescription
  
  public java.lang.String getTimestampAnnotationDescription(int timestampAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of TimestampAnnotation.
  
  Specified by:
  
  getTimestampAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  Returns:
  
  the Description property.
- getTimestampAnnotationID
  
  public java.lang.String getTimestampAnnotationID(int timestampAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of TimestampAnnotation.
  
  Specified by:
  
  getTimestampAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  Returns:
  
  the ID property.
- getTimestampAnnotationNamespace
  
  public java.lang.String getTimestampAnnotationNamespace(int timestampAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of TimestampAnnotation.
  
  Specified by:
  
  getTimestampAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  Returns:
  
  the Namespace property.
- getTimestampAnnotationValue
  
  public Timestamp getTimestampAnnotationValue(int timestampAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of TimestampAnnotation.
  
  Specified by:
  
  getTimestampAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  Returns:
  
  the Value property.
- getTransmittanceRangeCutIn
  
  public Length getTransmittanceRangeCutIn(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CutIn property of TransmittanceRange.
  
  Specified by:
  
  getTransmittanceRangeCutIn in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the CutIn property.
- getTransmittanceRangeCutInTolerance
  
  public Length getTransmittanceRangeCutInTolerance(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CutInTolerance property of TransmittanceRange.
  
  Specified by:
  
  getTransmittanceRangeCutInTolerance in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the CutInTolerance property.
- getTransmittanceRangeCutOut
  
  public Length getTransmittanceRangeCutOut(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CutOut property of TransmittanceRange.
  
  Specified by:
  
  getTransmittanceRangeCutOut in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the CutOut property.
- getTransmittanceRangeCutOutTolerance
  
  public Length getTransmittanceRangeCutOutTolerance(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the CutOutTolerance property of TransmittanceRange.
  
  Specified by:
  
  getTransmittanceRangeCutOutTolerance in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the CutOutTolerance property.
- getTransmittanceRangeTransmittance
  
  public PercentFraction getTransmittanceRangeTransmittance(int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Transmittance property of TransmittanceRange.
  
  Specified by:
  
  getTransmittanceRangeTransmittance in interface MetadataRetrieve
  
  Parameters:
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  Returns:
  
  the Transmittance property.
- getUUIDFileName
  
  public java.lang.String getUUIDFileName(int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the FileName property of UUID.
  
  Specified by:
  
  getUUIDFileName in interface MetadataRetrieve
  
  Parameters:
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
  
  Returns:
  
  the FileName property.
- getWellAnnotationRef
  
  public java.lang.String getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of Well.
  
  Specified by:
  
  getWellAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getWellColor
  
  public Color getWellColor(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Color property of Well.
  
  Specified by:
  
  getWellColor in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the Color property.
- getWellColumn
  
  public NonNegativeInteger getWellColumn(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Column property of Well.
  
  Specified by:
  
  getWellColumn in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the Column property.
- getWellExternalDescription
  
  public java.lang.String getWellExternalDescription(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExternalDescription property of Well.
  
  Specified by:
  
  getWellExternalDescription in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the ExternalDescription property.
- getWellExternalIdentifier
  
  public java.lang.String getWellExternalIdentifier(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ExternalIdentifier property of Well.
  
  Specified by:
  
  getWellExternalIdentifier in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the ExternalIdentifier property.
- getWellID
  
  public java.lang.String getWellID(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of Well.
  
  Specified by:
  
  getWellID in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the ID property.
- getWellReagentRef
  
  public java.lang.String getWellReagentRef(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ReagentRef property of Well.
  
  Specified by:
  
  getWellReagentRef in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the ReagentRef property.
- getWellRow
  
  public NonNegativeInteger getWellRow(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Row property of Well.
  
  Specified by:
  
  getWellRow in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the Row property.
- getWellType
  
  public java.lang.String getWellType(int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Type property of Well.
  
  Specified by:
  
  getWellType in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  Returns:
  
  the Type property.
- getWellSampleID
  
  public java.lang.String getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of WellSample.
  
  Specified by:
  
  getWellSampleID in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
  
  Returns:
  
  the ID property.
- getWellSampleImageRef
  
  public java.lang.String getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ImageRef property of WellSample.
  
  Specified by:
  
  getWellSampleImageRef in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
  
  Returns:
  
  the ImageRef property.
- getWellSampleIndex
  
  public NonNegativeInteger getWellSampleIndex(int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Index property of WellSample.
  
  Specified by:
  
  getWellSampleIndex in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
  
  Returns:
  
  the Index property.
- getWellSamplePositionX
  
  public Length getWellSamplePositionX(int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PositionX property of WellSample.
  
  Specified by:
  
  getWellSamplePositionX in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
  
  Returns:
  
  the PositionX property.
- getWellSamplePositionY
  
  public Length getWellSamplePositionY(int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the PositionY property of WellSample.
  
  Specified by:
  
  getWellSamplePositionY in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
  
  Returns:
  
  the PositionY property.
- getWellSampleTimepoint
  
  public Timestamp getWellSampleTimepoint(int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Timepoint property of WellSample.
  
  Specified by:
  
  getWellSampleTimepoint in interface MetadataRetrieve
  
  Parameters:
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
  
  Returns:
  
  the Timepoint property.
- getXMLAnnotationAnnotationRef
  
  public java.lang.String getXMLAnnotationAnnotationRef(int XMLAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the AnnotationRef property of XMLAnnotation.
  
  Specified by:
  
  getXMLAnnotationAnnotationRef in interface MetadataRetrieve
  
  Parameters:
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  annotationRefIndex - AnnotationRef index.
  
  Returns:
  
  the AnnotationRef property.
- getXMLAnnotationAnnotator
  
  public java.lang.String getXMLAnnotationAnnotator(int XMLAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Annotator property of XMLAnnotation.
  
  Specified by:
  
  getXMLAnnotationAnnotator in interface MetadataRetrieve
  
  Parameters:
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  Returns:
  
  the Annotator property.
- getXMLAnnotationDescription
  
  public java.lang.String getXMLAnnotationDescription(int XMLAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Description property of XMLAnnotation.
  
  Specified by:
  
  getXMLAnnotationDescription in interface MetadataRetrieve
  
  Parameters:
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  Returns:
  
  the Description property.
- getXMLAnnotationID
  
  public java.lang.String getXMLAnnotationID(int XMLAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the ID property of XMLAnnotation.
  
  Specified by:
  
  getXMLAnnotationID in interface MetadataRetrieve
  
  Parameters:
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  Returns:
  
  the ID property.
- getXMLAnnotationNamespace
  
  public java.lang.String getXMLAnnotationNamespace(int XMLAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Namespace property of XMLAnnotation.
  
  Specified by:
  
  getXMLAnnotationNamespace in interface MetadataRetrieve
  
  Parameters:
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  Returns:
  
  the Namespace property.
- getXMLAnnotationValue
  
  public java.lang.String getXMLAnnotationValue(int XMLAnnotationIndex)
  
  Description copied from interface: MetadataRetrieve
  
  Get the Value property of XMLAnnotation.
  
  Specified by:
  
  getXMLAnnotationValue in interface MetadataRetrieve
  
  Parameters:
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  Returns:
  
  the Value property.
- setUUID
  
  public void setUUID(java.lang.String uuid)
  
  Sets the UUID associated with this collection of metadata.
  
  Specified by:
  
  setUUID in interface MetadataStore
  
  Parameters:
  
  uuid - the UUID to set.
- setCreator
  
  public void setCreator(java.lang.String creator)
  
  Sets the Creator associated with this collection of metadata.
  
  Specified by:
  
  setCreator in interface MetadataStore
  
  Parameters:
  
  creator - the Creator to set.
- setMapAnnotationValue
  
  public void setMapAnnotationValue(java.util.List<MapPair> value, int mapAnnotationIndex)
  
  Sets the Map value associated with this annotation
  
  Specified by:
  
  setMapAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - the MapAnnotation values to set.
  
  mapAnnotationIndex - the MapAnnotation index.
- setGenericExcitationSourceMap
  
  public void setGenericExcitationSourceMap(java.util.List<MapPair> map, int instrumentIndex, int lightSourceIndex)
  
  Sets the Map value associated with this generic light source
  
  Specified by:
  
  setGenericExcitationSourceMap in interface MetadataStore
  
  Parameters:
  
  map - the MapAnnotation values to set.
  
  instrumentIndex - the Instrument index.
- setImagingEnvironmentMap
  
  public void setImagingEnvironmentMap(java.util.List<MapPair> map, int imageIndex)
  
  Sets the Map value associated with this imaging environment
  
  Specified by:
  
  setImagingEnvironmentMap in interface MetadataStore
  
  Parameters:
  
  map - the MapAnnotation values to set.
  
  imageIndex - the Image index.
- setArcAnnotationRef
  
  public void setArcAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Arc.
  
  Specified by:
  
  setArcAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setArcID
  
  public void setArcID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Arc.
  
  Specified by:
  
  setArcID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setArcLotNumber
  
  public void setArcLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Arc.
  
  Specified by:
  
  setArcLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setArcManufacturer
  
  public void setArcManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Arc.
  
  Specified by:
  
  setArcManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setArcModel
  
  public void setArcModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Arc.
  
  Specified by:
  
  setArcModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setArcPower
  
  public void setArcPower(Power power, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Power property of Arc.
  
  Specified by:
  
  setArcPower in interface MetadataStore
  
  Parameters:
  
  power - Power to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setArcSerialNumber
  
  public void setArcSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Arc.
  
  Specified by:
  
  setArcSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setArcType
  
  public void setArcType(ArcType type, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Arc.
  
  Specified by:
  
  setArcType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setBinaryFileBinData
  
  public void setBinaryFileBinData(byte[] base64Binary, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Base64Binary property of BinData.
  
  Specified by:
  
  setBinaryFileBinData in interface MetadataStore
  
  Parameters:
  
  base64Binary - Base64Binary to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setMaskBinData
  
  public void setMaskBinData(byte[] base64Binary, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Base64Binary property of BinData.
  
  Specified by:
  
  setMaskBinData in interface MetadataStore
  
  Parameters:
  
  base64Binary - Base64Binary to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPixelsBinData
  
  public void setPixelsBinData(byte[] base64Binary, int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Base64Binary property of BinData.
  
  Specified by:
  
  setPixelsBinData in interface MetadataStore
  
  Parameters:
  
  base64Binary - Base64Binary to set.
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
- setBinaryFileBinDataBigEndian
  
  public void setBinaryFileBinDataBigEndian(java.lang.Boolean bigEndian, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the BigEndian property of BinData.
  
  Specified by:
  
  setBinaryFileBinDataBigEndian in interface MetadataStore
  
  Parameters:
  
  bigEndian - BigEndian to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setMaskBinDataBigEndian
  
  public void setMaskBinDataBigEndian(java.lang.Boolean bigEndian, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the BigEndian property of BinData.
  
  Specified by:
  
  setMaskBinDataBigEndian in interface MetadataStore
  
  Parameters:
  
  bigEndian - BigEndian to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPixelsBinDataBigEndian
  
  public void setPixelsBinDataBigEndian(java.lang.Boolean bigEndian, int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the BigEndian property of BinData.
  
  Specified by:
  
  setPixelsBinDataBigEndian in interface MetadataStore
  
  Parameters:
  
  bigEndian - BigEndian to set.
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
- setBinaryFileBinDataCompression
  
  public void setBinaryFileBinDataCompression(Compression compression, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Compression property of BinData.
  
  Specified by:
  
  setBinaryFileBinDataCompression in interface MetadataStore
  
  Parameters:
  
  compression - Compression to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setMaskBinDataCompression
  
  public void setMaskBinDataCompression(Compression compression, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Compression property of BinData.
  
  Specified by:
  
  setMaskBinDataCompression in interface MetadataStore
  
  Parameters:
  
  compression - Compression to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPixelsBinDataCompression
  
  public void setPixelsBinDataCompression(Compression compression, int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Compression property of BinData.
  
  Specified by:
  
  setPixelsBinDataCompression in interface MetadataStore
  
  Parameters:
  
  compression - Compression to set.
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
- setBinaryFileBinDataLength
  
  public void setBinaryFileBinDataLength(NonNegativeLong length, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Length property of BinData.
  
  Specified by:
  
  setBinaryFileBinDataLength in interface MetadataStore
  
  Parameters:
  
  length - Length to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setMaskBinDataLength
  
  public void setMaskBinDataLength(NonNegativeLong length, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Length property of BinData.
  
  Specified by:
  
  setMaskBinDataLength in interface MetadataStore
  
  Parameters:
  
  length - Length to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPixelsBinDataLength
  
  public void setPixelsBinDataLength(NonNegativeLong length, int imageIndex, int binDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Length property of BinData.
  
  Specified by:
  
  setPixelsBinDataLength in interface MetadataStore
  
  Parameters:
  
  length - Length to set.
  
  imageIndex - the Image index.
  
  binDataIndex - the BinData index.
- setBinaryFileFileName
  
  public void setBinaryFileFileName(java.lang.String fileName, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FileName property of BinaryFile.
  
  Specified by:
  
  setBinaryFileFileName in interface MetadataStore
  
  Parameters:
  
  fileName - FileName to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setBinaryFileMIMEType
  
  public void setBinaryFileMIMEType(java.lang.String mimeType, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MIMEType property of BinaryFile.
  
  Specified by:
  
  setBinaryFileMIMEType in interface MetadataStore
  
  Parameters:
  
  mimeType - MIMEType to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setBinaryFileSize
  
  public void setBinaryFileSize(NonNegativeLong size, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Size property of BinaryFile.
  
  Specified by:
  
  setBinaryFileSize in interface MetadataStore
  
  Parameters:
  
  size - Size to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setBinaryOnlyMetadataFile
  
  public void setBinaryOnlyMetadataFile(java.lang.String metadataFile)
  
  Description copied from interface: MetadataStore
  
  Set the MetadataFile property of BinaryOnly.
  
  Specified by:
  
  setBinaryOnlyMetadataFile in interface MetadataStore
  
  Parameters:
  
  metadataFile - MetadataFile to set.
- setBinaryOnlyUUID
  
  public void setBinaryOnlyUUID(java.lang.String uuid)
  
  Description copied from interface: MetadataStore
  
  Set the UUID property of BinaryOnly.
  
  Specified by:
  
  setBinaryOnlyUUID in interface MetadataStore
  
  Parameters:
  
  uuid - UUID to set.
- setBooleanAnnotationAnnotationRef
  
  public void setBooleanAnnotationAnnotationRef(java.lang.String annotation, int booleanAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of BooleanAnnotation.
  
  Specified by:
  
  setBooleanAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  booleanAnnotationIndex - the BooleanAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setBooleanAnnotationAnnotator
  
  public void setBooleanAnnotationAnnotator(java.lang.String annotator, int booleanAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of BooleanAnnotation.
  
  Specified by:
  
  setBooleanAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  booleanAnnotationIndex - the BooleanAnnotation index.
- setBooleanAnnotationDescription
  
  public void setBooleanAnnotationDescription(java.lang.String description, int booleanAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of BooleanAnnotation.
  
  Specified by:
  
  setBooleanAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  booleanAnnotationIndex - the BooleanAnnotation index.
- setBooleanAnnotationID
  
  public void setBooleanAnnotationID(java.lang.String id, int booleanAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of BooleanAnnotation.
  
  Specified by:
  
  setBooleanAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  booleanAnnotationIndex - the BooleanAnnotation index.
- setBooleanAnnotationNamespace
  
  public void setBooleanAnnotationNamespace(java.lang.String namespace, int booleanAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of BooleanAnnotation.
  
  Specified by:
  
  setBooleanAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  booleanAnnotationIndex - the BooleanAnnotation index.
- setBooleanAnnotationValue
  
  public void setBooleanAnnotationValue(java.lang.Boolean value, int booleanAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of BooleanAnnotation.
  
  Specified by:
  
  setBooleanAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  booleanAnnotationIndex - the BooleanAnnotation index.
- setChannelAcquisitionMode
  
  public void setChannelAcquisitionMode(AcquisitionMode acquisitionMode, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AcquisitionMode property of Channel.
  
  Specified by:
  
  setChannelAcquisitionMode in interface MetadataStore
  
  Parameters:
  
  acquisitionMode - AcquisitionMode to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelAnnotationRef
  
  public void setChannelAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Channel.
  
  Specified by:
  
  setChannelAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setChannelColor
  
  public void setChannelColor(Color color, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Color property of Channel.
  
  Specified by:
  
  setChannelColor in interface MetadataStore
  
  Parameters:
  
  color - Color to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelContrastMethod
  
  public void setChannelContrastMethod(ContrastMethod contrastMethod, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ContrastMethod property of Channel.
  
  Specified by:
  
  setChannelContrastMethod in interface MetadataStore
  
  Parameters:
  
  contrastMethod - ContrastMethod to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelEmissionWavelength
  
  public void setChannelEmissionWavelength(Length emissionWavelength, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the EmissionWavelength property of Channel.
  
  Specified by:
  
  setChannelEmissionWavelength in interface MetadataStore
  
  Parameters:
  
  emissionWavelength - EmissionWavelength to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelExcitationWavelength
  
  public void setChannelExcitationWavelength(Length excitationWavelength, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExcitationWavelength property of Channel.
  
  Specified by:
  
  setChannelExcitationWavelength in interface MetadataStore
  
  Parameters:
  
  excitationWavelength - ExcitationWavelength to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelFilterSetRef
  
  public void setChannelFilterSetRef(java.lang.String filterSet, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FilterSetRef property of Channel.
  
  Specified by:
  
  setChannelFilterSetRef in interface MetadataStore
  
  Parameters:
  
  filterSet - FilterSetRef to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelFluor
  
  public void setChannelFluor(java.lang.String fluor, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Fluor property of Channel.
  
  Specified by:
  
  setChannelFluor in interface MetadataStore
  
  Parameters:
  
  fluor - Fluor to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelID
  
  public void setChannelID(java.lang.String id, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Channel.
  
  Specified by:
  
  setChannelID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelIlluminationType
  
  public void setChannelIlluminationType(IlluminationType illuminationType, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the IlluminationType property of Channel.
  
  Specified by:
  
  setChannelIlluminationType in interface MetadataStore
  
  Parameters:
  
  illuminationType - IlluminationType to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelNDFilter
  
  public void setChannelNDFilter(java.lang.Double ndFilter, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the NDFilter property of Channel.
  
  Specified by:
  
  setChannelNDFilter in interface MetadataStore
  
  Parameters:
  
  ndFilter - NDFilter to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelName
  
  public void setChannelName(java.lang.String name, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Channel.
  
  Specified by:
  
  setChannelName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelPinholeSize
  
  public void setChannelPinholeSize(Length pinholeSize, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PinholeSize property of Channel.
  
  Specified by:
  
  setChannelPinholeSize in interface MetadataStore
  
  Parameters:
  
  pinholeSize - PinholeSize to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelPockelCellSetting
  
  public void setChannelPockelCellSetting(java.lang.Integer pockelCellSetting, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PockelCellSetting property of Channel.
  
  Specified by:
  
  setChannelPockelCellSetting in interface MetadataStore
  
  Parameters:
  
  pockelCellSetting - PockelCellSetting to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setChannelSamplesPerPixel
  
  public void setChannelSamplesPerPixel(PositiveInteger samplesPerPixel, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SamplesPerPixel property of Channel.
  
  Specified by:
  
  setChannelSamplesPerPixel in interface MetadataStore
  
  Parameters:
  
  samplesPerPixel - SamplesPerPixel to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setCommentAnnotationAnnotationRef
  
  public void setCommentAnnotationAnnotationRef(java.lang.String annotation, int commentAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of CommentAnnotation.
  
  Specified by:
  
  setCommentAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  commentAnnotationIndex - the CommentAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setCommentAnnotationAnnotator
  
  public void setCommentAnnotationAnnotator(java.lang.String annotator, int commentAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of CommentAnnotation.
  
  Specified by:
  
  setCommentAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  commentAnnotationIndex - the CommentAnnotation index.
- setCommentAnnotationDescription
  
  public void setCommentAnnotationDescription(java.lang.String description, int commentAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of CommentAnnotation.
  
  Specified by:
  
  setCommentAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  commentAnnotationIndex - the CommentAnnotation index.
- setCommentAnnotationID
  
  public void setCommentAnnotationID(java.lang.String id, int commentAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of CommentAnnotation.
  
  Specified by:
  
  setCommentAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  commentAnnotationIndex - the CommentAnnotation index.
- setCommentAnnotationNamespace
  
  public void setCommentAnnotationNamespace(java.lang.String namespace, int commentAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of CommentAnnotation.
  
  Specified by:
  
  setCommentAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  commentAnnotationIndex - the CommentAnnotation index.
- setCommentAnnotationValue
  
  public void setCommentAnnotationValue(java.lang.String value, int commentAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of CommentAnnotation.
  
  Specified by:
  
  setCommentAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  commentAnnotationIndex - the CommentAnnotation index.
- setDatasetAnnotationRef
  
  public void setDatasetAnnotationRef(java.lang.String annotation, int datasetIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Dataset.
  
  Specified by:
  
  setDatasetAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  datasetIndex - the Dataset index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setDatasetDescription
  
  public void setDatasetDescription(java.lang.String description, int datasetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Dataset.
  
  Specified by:
  
  setDatasetDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  datasetIndex - the Dataset index.
- setDatasetExperimenterGroupRef
  
  public void setDatasetExperimenterGroupRef(java.lang.String experimenterGroup, int datasetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterGroupRef property of Dataset.
  
  Specified by:
  
  setDatasetExperimenterGroupRef in interface MetadataStore
  
  Parameters:
  
  experimenterGroup - ExperimenterGroupRef to set.
  
  datasetIndex - the Dataset index.
- setDatasetExperimenterRef
  
  public void setDatasetExperimenterRef(java.lang.String experimenter, int datasetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterRef property of Dataset.
  
  Specified by:
  
  setDatasetExperimenterRef in interface MetadataStore
  
  Parameters:
  
  experimenter - ExperimenterRef to set.
  
  datasetIndex - the Dataset index.
- setDatasetID
  
  public void setDatasetID(java.lang.String id, int datasetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Dataset.
  
  Specified by:
  
  setDatasetID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  datasetIndex - the Dataset index.
- setDatasetImageRef
  
  public void setDatasetImageRef(java.lang.String image, int datasetIndex, int imageRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ImageRef property of Dataset.
  
  Specified by:
  
  setDatasetImageRef in interface MetadataStore
  
  Parameters:
  
  image - ImageRef to set.
  
  datasetIndex - the Dataset index.
  
  imageRefIndex - ImageRef index (unused).
- setDatasetName
  
  public void setDatasetName(java.lang.String name, int datasetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Dataset.
  
  Specified by:
  
  setDatasetName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  datasetIndex - the Dataset index.
- setDetectorAmplificationGain
  
  public void setDetectorAmplificationGain(java.lang.Double amplificationGain, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AmplificationGain property of Detector.
  
  Specified by:
  
  setDetectorAmplificationGain in interface MetadataStore
  
  Parameters:
  
  amplificationGain - AmplificationGain to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorAnnotationRef
  
  public void setDetectorAnnotationRef(java.lang.String annotation, int instrumentIndex, int detectorIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Detector.
  
  Specified by:
  
  setDetectorAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setDetectorGain
  
  public void setDetectorGain(java.lang.Double gain, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Gain property of Detector.
  
  Specified by:
  
  setDetectorGain in interface MetadataStore
  
  Parameters:
  
  gain - Gain to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorID
  
  public void setDetectorID(java.lang.String id, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Detector.
  
  Specified by:
  
  setDetectorID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorLotNumber
  
  public void setDetectorLotNumber(java.lang.String lotNumber, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Detector.
  
  Specified by:
  
  setDetectorLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorManufacturer
  
  public void setDetectorManufacturer(java.lang.String manufacturer, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Detector.
  
  Specified by:
  
  setDetectorManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorModel
  
  public void setDetectorModel(java.lang.String model, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Detector.
  
  Specified by:
  
  setDetectorModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorOffset
  
  public void setDetectorOffset(java.lang.Double offset, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Offset property of Detector.
  
  Specified by:
  
  setDetectorOffset in interface MetadataStore
  
  Parameters:
  
  offset - Offset to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorSerialNumber
  
  public void setDetectorSerialNumber(java.lang.String serialNumber, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Detector.
  
  Specified by:
  
  setDetectorSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorType
  
  public void setDetectorType(DetectorType type, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Detector.
  
  Specified by:
  
  setDetectorType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorVoltage
  
  public void setDetectorVoltage(ElectricPotential voltage, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Voltage property of Detector.
  
  Specified by:
  
  setDetectorVoltage in interface MetadataStore
  
  Parameters:
  
  voltage - Voltage to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorZoom
  
  public void setDetectorZoom(java.lang.Double zoom, int instrumentIndex, int detectorIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Zoom property of Detector.
  
  Specified by:
  
  setDetectorZoom in interface MetadataStore
  
  Parameters:
  
  zoom - Zoom to set.
  
  instrumentIndex - the Instrument index.
  
  detectorIndex - the Detector index.
- setDetectorSettingsBinning
  
  public void setDetectorSettingsBinning(Binning binning, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Binning property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsBinning in interface MetadataStore
  
  Parameters:
  
  binning - Binning to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsGain
  
  public void setDetectorSettingsGain(java.lang.Double gain, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Gain property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsGain in interface MetadataStore
  
  Parameters:
  
  gain - Gain to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsID
  
  public void setDetectorSettingsID(java.lang.String id, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsIntegration
  
  public void setDetectorSettingsIntegration(PositiveInteger integration, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Integration property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsIntegration in interface MetadataStore
  
  Parameters:
  
  integration - Integration to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsOffset
  
  public void setDetectorSettingsOffset(java.lang.Double offset, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Offset property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsOffset in interface MetadataStore
  
  Parameters:
  
  offset - Offset to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsReadOutRate
  
  public void setDetectorSettingsReadOutRate(Frequency readOutRate, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ReadOutRate property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsReadOutRate in interface MetadataStore
  
  Parameters:
  
  readOutRate - ReadOutRate to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsVoltage
  
  public void setDetectorSettingsVoltage(ElectricPotential voltage, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Voltage property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsVoltage in interface MetadataStore
  
  Parameters:
  
  voltage - Voltage to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDetectorSettingsZoom
  
  public void setDetectorSettingsZoom(java.lang.Double zoom, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Zoom property of DetectorSettings.
  
  Specified by:
  
  setDetectorSettingsZoom in interface MetadataStore
  
  Parameters:
  
  zoom - Zoom to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setDichroicAnnotationRef
  
  public void setDichroicAnnotationRef(java.lang.String annotation, int instrumentIndex, int dichroicIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Dichroic.
  
  Specified by:
  
  setDichroicAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setDichroicID
  
  public void setDichroicID(java.lang.String id, int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Dichroic.
  
  Specified by:
  
  setDichroicID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
- setDichroicLotNumber
  
  public void setDichroicLotNumber(java.lang.String lotNumber, int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Dichroic.
  
  Specified by:
  
  setDichroicLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
- setDichroicManufacturer
  
  public void setDichroicManufacturer(java.lang.String manufacturer, int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Dichroic.
  
  Specified by:
  
  setDichroicManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
- setDichroicModel
  
  public void setDichroicModel(java.lang.String model, int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Dichroic.
  
  Specified by:
  
  setDichroicModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
- setDichroicSerialNumber
  
  public void setDichroicSerialNumber(java.lang.String serialNumber, int instrumentIndex, int dichroicIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Dichroic.
  
  Specified by:
  
  setDichroicSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  dichroicIndex - the Dichroic index.
- setDoubleAnnotationAnnotationRef
  
  public void setDoubleAnnotationAnnotationRef(java.lang.String annotation, int doubleAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of DoubleAnnotation.
  
  Specified by:
  
  setDoubleAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  doubleAnnotationIndex - the DoubleAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setDoubleAnnotationAnnotator
  
  public void setDoubleAnnotationAnnotator(java.lang.String annotator, int doubleAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of DoubleAnnotation.
  
  Specified by:
  
  setDoubleAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  doubleAnnotationIndex - the DoubleAnnotation index.
- setDoubleAnnotationDescription
  
  public void setDoubleAnnotationDescription(java.lang.String description, int doubleAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of DoubleAnnotation.
  
  Specified by:
  
  setDoubleAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  doubleAnnotationIndex - the DoubleAnnotation index.
- setDoubleAnnotationID
  
  public void setDoubleAnnotationID(java.lang.String id, int doubleAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of DoubleAnnotation.
  
  Specified by:
  
  setDoubleAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  doubleAnnotationIndex - the DoubleAnnotation index.
- setDoubleAnnotationNamespace
  
  public void setDoubleAnnotationNamespace(java.lang.String namespace, int doubleAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of DoubleAnnotation.
  
  Specified by:
  
  setDoubleAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  doubleAnnotationIndex - the DoubleAnnotation index.
- setDoubleAnnotationValue
  
  public void setDoubleAnnotationValue(java.lang.Double value, int doubleAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of DoubleAnnotation.
  
  Specified by:
  
  setDoubleAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  doubleAnnotationIndex - the DoubleAnnotation index.
- setEllipseAnnotationRef
  
  public void setEllipseAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Ellipse.
  
  Specified by:
  
  setEllipseAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setEllipseFillColor
  
  public void setEllipseFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Ellipse.
  
  Specified by:
  
  setEllipseFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseFillRule
  
  public void setEllipseFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Ellipse.
  
  Specified by:
  
  setEllipseFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseFontFamily
  
  public void setEllipseFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Ellipse.
  
  Specified by:
  
  setEllipseFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseFontSize
  
  public void setEllipseFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Ellipse.
  
  Specified by:
  
  setEllipseFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseFontStyle
  
  public void setEllipseFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Ellipse.
  
  Specified by:
  
  setEllipseFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseID
  
  public void setEllipseID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Ellipse.
  
  Specified by:
  
  setEllipseID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseLocked
  
  public void setEllipseLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Ellipse.
  
  Specified by:
  
  setEllipseLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseRadiusX
  
  public void setEllipseRadiusX(java.lang.Double radiusX, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the RadiusX property of Ellipse.
  
  Specified by:
  
  setEllipseRadiusX in interface MetadataStore
  
  Parameters:
  
  radiusX - RadiusX to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseRadiusY
  
  public void setEllipseRadiusY(java.lang.Double radiusY, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the RadiusY property of Ellipse.
  
  Specified by:
  
  setEllipseRadiusY in interface MetadataStore
  
  Parameters:
  
  radiusY - RadiusY to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseStrokeColor
  
  public void setEllipseStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Ellipse.
  
  Specified by:
  
  setEllipseStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseStrokeDashArray
  
  public void setEllipseStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Ellipse.
  
  Specified by:
  
  setEllipseStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseStrokeWidth
  
  public void setEllipseStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Ellipse.
  
  Specified by:
  
  setEllipseStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseText
  
  public void setEllipseText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Ellipse.
  
  Specified by:
  
  setEllipseText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseTheC
  
  public void setEllipseTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Ellipse.
  
  Specified by:
  
  setEllipseTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseTheT
  
  public void setEllipseTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Ellipse.
  
  Specified by:
  
  setEllipseTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseTheZ
  
  public void setEllipseTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Ellipse.
  
  Specified by:
  
  setEllipseTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseTransform
  
  public void setEllipseTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Ellipse.
  
  Specified by:
  
  setEllipseTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseX
  
  public void setEllipseX(java.lang.Double x, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X property of Ellipse.
  
  Specified by:
  
  setEllipseX in interface MetadataStore
  
  Parameters:
  
  x - X to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setEllipseY
  
  public void setEllipseY(java.lang.Double y, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y property of Ellipse.
  
  Specified by:
  
  setEllipseY in interface MetadataStore
  
  Parameters:
  
  y - Y to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setExperimentDescription
  
  public void setExperimentDescription(java.lang.String description, int experimentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Experiment.
  
  Specified by:
  
  setExperimentDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  experimentIndex - the Experiment index.
- setExperimentExperimenterRef
  
  public void setExperimentExperimenterRef(java.lang.String experimenter, int experimentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterRef property of Experiment.
  
  Specified by:
  
  setExperimentExperimenterRef in interface MetadataStore
  
  Parameters:
  
  experimenter - ExperimenterRef to set.
  
  experimentIndex - the Experiment index.
- setExperimentID
  
  public void setExperimentID(java.lang.String id, int experimentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Experiment.
  
  Specified by:
  
  setExperimentID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  experimentIndex - the Experiment index.
- setExperimentType
  
  public void setExperimentType(ExperimentType type, int experimentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Experiment.
  
  Specified by:
  
  setExperimentType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  experimentIndex - the Experiment index.
- setExperimenterAnnotationRef
  
  public void setExperimenterAnnotationRef(java.lang.String annotation, int experimenterIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Experimenter.
  
  Specified by:
  
  setExperimenterAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  experimenterIndex - the Experimenter index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setExperimenterEmail
  
  public void setExperimenterEmail(java.lang.String email, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Email property of Experimenter.
  
  Specified by:
  
  setExperimenterEmail in interface MetadataStore
  
  Parameters:
  
  email - Email to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterFirstName
  
  public void setExperimenterFirstName(java.lang.String firstName, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FirstName property of Experimenter.
  
  Specified by:
  
  setExperimenterFirstName in interface MetadataStore
  
  Parameters:
  
  firstName - FirstName to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterID
  
  public void setExperimenterID(java.lang.String id, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Experimenter.
  
  Specified by:
  
  setExperimenterID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterInstitution
  
  public void setExperimenterInstitution(java.lang.String institution, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Institution property of Experimenter.
  
  Specified by:
  
  setExperimenterInstitution in interface MetadataStore
  
  Parameters:
  
  institution - Institution to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterLastName
  
  public void setExperimenterLastName(java.lang.String lastName, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LastName property of Experimenter.
  
  Specified by:
  
  setExperimenterLastName in interface MetadataStore
  
  Parameters:
  
  lastName - LastName to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterMiddleName
  
  public void setExperimenterMiddleName(java.lang.String middleName, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MiddleName property of Experimenter.
  
  Specified by:
  
  setExperimenterMiddleName in interface MetadataStore
  
  Parameters:
  
  middleName - MiddleName to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterUserName
  
  public void setExperimenterUserName(java.lang.String userName, int experimenterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the UserName property of Experimenter.
  
  Specified by:
  
  setExperimenterUserName in interface MetadataStore
  
  Parameters:
  
  userName - UserName to set.
  
  experimenterIndex - the Experimenter index.
- setExperimenterGroupAnnotationRef
  
  public void setExperimenterGroupAnnotationRef(java.lang.String annotation, int experimenterGroupIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of ExperimenterGroup.
  
  Specified by:
  
  setExperimenterGroupAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setExperimenterGroupDescription
  
  public void setExperimenterGroupDescription(java.lang.String description, int experimenterGroupIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of ExperimenterGroup.
  
  Specified by:
  
  setExperimenterGroupDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  experimenterGroupIndex - the ExperimenterGroup index.
- setExperimenterGroupExperimenterRef
  
  public void setExperimenterGroupExperimenterRef(java.lang.String experimenter, int experimenterGroupIndex, int experimenterRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterRef property of ExperimenterGroup.
  
  Specified by:
  
  setExperimenterGroupExperimenterRef in interface MetadataStore
  
  Parameters:
  
  experimenter - ExperimenterRef to set.
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  experimenterRefIndex - ExperimenterRef index (unused).
- setExperimenterGroupID
  
  public void setExperimenterGroupID(java.lang.String id, int experimenterGroupIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of ExperimenterGroup.
  
  Specified by:
  
  setExperimenterGroupID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  experimenterGroupIndex - the ExperimenterGroup index.
- setExperimenterGroupLeader
  
  public void setExperimenterGroupLeader(java.lang.String leader, int experimenterGroupIndex, int leaderIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Leader property of ExperimenterGroup.
  
  Specified by:
  
  setExperimenterGroupLeader in interface MetadataStore
  
  Parameters:
  
  leader - Leader to set.
  
  experimenterGroupIndex - the ExperimenterGroup index.
  
  leaderIndex - Leader index (unused).
- setExperimenterGroupName
  
  public void setExperimenterGroupName(java.lang.String name, int experimenterGroupIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of ExperimenterGroup.
  
  Specified by:
  
  setExperimenterGroupName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  experimenterGroupIndex - the ExperimenterGroup index.
- setFilamentAnnotationRef
  
  public void setFilamentAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Filament.
  
  Specified by:
  
  setFilamentAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setFilamentID
  
  public void setFilamentID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Filament.
  
  Specified by:
  
  setFilamentID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFilamentLotNumber
  
  public void setFilamentLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Filament.
  
  Specified by:
  
  setFilamentLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFilamentManufacturer
  
  public void setFilamentManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Filament.
  
  Specified by:
  
  setFilamentManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFilamentModel
  
  public void setFilamentModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Filament.
  
  Specified by:
  
  setFilamentModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFilamentPower
  
  public void setFilamentPower(Power power, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Power property of Filament.
  
  Specified by:
  
  setFilamentPower in interface MetadataStore
  
  Parameters:
  
  power - Power to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFilamentSerialNumber
  
  public void setFilamentSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Filament.
  
  Specified by:
  
  setFilamentSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFilamentType
  
  public void setFilamentType(FilamentType type, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Filament.
  
  Specified by:
  
  setFilamentType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setFileAnnotationAnnotationRef
  
  public void setFileAnnotationAnnotationRef(java.lang.String annotation, int fileAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of FileAnnotation.
  
  Specified by:
  
  setFileAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  fileAnnotationIndex - the FileAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setFileAnnotationAnnotator
  
  public void setFileAnnotationAnnotator(java.lang.String annotator, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of FileAnnotation.
  
  Specified by:
  
  setFileAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setFileAnnotationDescription
  
  public void setFileAnnotationDescription(java.lang.String description, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of FileAnnotation.
  
  Specified by:
  
  setFileAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setFileAnnotationID
  
  public void setFileAnnotationID(java.lang.String id, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of FileAnnotation.
  
  Specified by:
  
  setFileAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setFileAnnotationNamespace
  
  public void setFileAnnotationNamespace(java.lang.String namespace, int fileAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of FileAnnotation.
  
  Specified by:
  
  setFileAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  fileAnnotationIndex - the FileAnnotation index.
- setFilterAnnotationRef
  
  public void setFilterAnnotationRef(java.lang.String annotation, int instrumentIndex, int filterIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Filter.
  
  Specified by:
  
  setFilterAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setFilterFilterWheel
  
  public void setFilterFilterWheel(java.lang.String filterWheel, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FilterWheel property of Filter.
  
  Specified by:
  
  setFilterFilterWheel in interface MetadataStore
  
  Parameters:
  
  filterWheel - FilterWheel to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterID
  
  public void setFilterID(java.lang.String id, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Filter.
  
  Specified by:
  
  setFilterID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterLotNumber
  
  public void setFilterLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Filter.
  
  Specified by:
  
  setFilterLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterManufacturer
  
  public void setFilterManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Filter.
  
  Specified by:
  
  setFilterManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterModel
  
  public void setFilterModel(java.lang.String model, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Filter.
  
  Specified by:
  
  setFilterModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterSerialNumber
  
  public void setFilterSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Filter.
  
  Specified by:
  
  setFilterSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterType
  
  public void setFilterType(FilterType type, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Filter.
  
  Specified by:
  
  setFilterType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setFilterSetDichroicRef
  
  public void setFilterSetDichroicRef(java.lang.String dichroic, int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the DichroicRef property of FilterSet.
  
  Specified by:
  
  setFilterSetDichroicRef in interface MetadataStore
  
  Parameters:
  
  dichroic - DichroicRef to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
- setFilterSetEmissionFilterRef
  
  public void setFilterSetEmissionFilterRef(java.lang.String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the EmissionFilterRef property of FilterSet.
  
  Specified by:
  
  setFilterSetEmissionFilterRef in interface MetadataStore
  
  Parameters:
  
  emissionFilter - EmissionFilterRef to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  emissionFilterRefIndex - EmissionFilterRef index (unused).
- setFilterSetExcitationFilterRef
  
  public void setFilterSetExcitationFilterRef(java.lang.String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExcitationFilterRef property of FilterSet.
  
  Specified by:
  
  setFilterSetExcitationFilterRef in interface MetadataStore
  
  Parameters:
  
  excitationFilter - ExcitationFilterRef to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
  
  excitationFilterRefIndex - ExcitationFilterRef index (unused).
- setFilterSetID
  
  public void setFilterSetID(java.lang.String id, int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of FilterSet.
  
  Specified by:
  
  setFilterSetID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
- setFilterSetLotNumber
  
  public void setFilterSetLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of FilterSet.
  
  Specified by:
  
  setFilterSetLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
- setFilterSetManufacturer
  
  public void setFilterSetManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of FilterSet.
  
  Specified by:
  
  setFilterSetManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
- setFilterSetModel
  
  public void setFilterSetModel(java.lang.String model, int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of FilterSet.
  
  Specified by:
  
  setFilterSetModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
- setFilterSetSerialNumber
  
  public void setFilterSetSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterSetIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of FilterSet.
  
  Specified by:
  
  setFilterSetSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  filterSetIndex - the FilterSet index.
- setFolderAnnotationRef
  
  public void setFolderAnnotationRef(java.lang.String annotation, int folderIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Folder.
  
  Specified by:
  
  setFolderAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  folderIndex - the Folder index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setFolderDescription
  
  public void setFolderDescription(java.lang.String description, int folderIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Folder.
  
  Specified by:
  
  setFolderDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  folderIndex - the Folder index.
- setFolderFolderRef
  
  public void setFolderFolderRef(java.lang.String folder, int folderIndex, int folderRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FolderRef property of Folder.
  
  Specified by:
  
  setFolderFolderRef in interface MetadataStore
  
  Parameters:
  
  folder - FolderRef to set.
  
  folderIndex - the Folder index.
  
  folderRefIndex - FolderRef index (unused).
- setFolderID
  
  public void setFolderID(java.lang.String id, int folderIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Folder.
  
  Specified by:
  
  setFolderID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  folderIndex - the Folder index.
- setFolderImageRef
  
  public void setFolderImageRef(java.lang.String image, int folderIndex, int imageRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ImageRef property of Folder.
  
  Specified by:
  
  setFolderImageRef in interface MetadataStore
  
  Parameters:
  
  image - ImageRef to set.
  
  folderIndex - the Folder index.
  
  imageRefIndex - ImageRef index (unused).
- setFolderName
  
  public void setFolderName(java.lang.String name, int folderIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Folder.
  
  Specified by:
  
  setFolderName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  folderIndex - the Folder index.
- setFolderROIRef
  
  public void setFolderROIRef(java.lang.String roi, int folderIndex, int ROIRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ROIRef property of Folder.
  
  Specified by:
  
  setFolderROIRef in interface MetadataStore
  
  Parameters:
  
  roi - ROIRef to set.
  
  folderIndex - the Folder index.
  
  ROIRefIndex - ROIRef index (unused).
- setGenericExcitationSourceAnnotationRef
  
  public void setGenericExcitationSourceAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourceAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setGenericExcitationSourceID
  
  public void setGenericExcitationSourceID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourceID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setGenericExcitationSourceLotNumber
  
  public void setGenericExcitationSourceLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourceLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setGenericExcitationSourceManufacturer
  
  public void setGenericExcitationSourceManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourceManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setGenericExcitationSourceModel
  
  public void setGenericExcitationSourceModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourceModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setGenericExcitationSourcePower
  
  public void setGenericExcitationSourcePower(Power power, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Power property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourcePower in interface MetadataStore
  
  Parameters:
  
  power - Power to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setGenericExcitationSourceSerialNumber
  
  public void setGenericExcitationSourceSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of GenericExcitationSource.
  
  Specified by:
  
  setGenericExcitationSourceSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setImageAcquisitionDate
  
  public void setImageAcquisitionDate(Timestamp acquisitionDate, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AcquisitionDate property of Image.
  
  Specified by:
  
  setImageAcquisitionDate in interface MetadataStore
  
  Parameters:
  
  acquisitionDate - AcquisitionDate to set.
  
  imageIndex - the Image index.
- setImageAnnotationRef
  
  public void setImageAnnotationRef(java.lang.String annotation, int imageIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Image.
  
  Specified by:
  
  setImageAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  imageIndex - the Image index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setImageDescription
  
  public void setImageDescription(java.lang.String description, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Image.
  
  Specified by:
  
  setImageDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  imageIndex - the Image index.
- setImageExperimentRef
  
  public void setImageExperimentRef(java.lang.String experiment, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimentRef property of Image.
  
  Specified by:
  
  setImageExperimentRef in interface MetadataStore
  
  Parameters:
  
  experiment - ExperimentRef to set.
  
  imageIndex - the Image index.
- setImageExperimenterGroupRef
  
  public void setImageExperimenterGroupRef(java.lang.String experimenterGroup, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterGroupRef property of Image.
  
  Specified by:
  
  setImageExperimenterGroupRef in interface MetadataStore
  
  Parameters:
  
  experimenterGroup - ExperimenterGroupRef to set.
  
  imageIndex - the Image index.
- setImageExperimenterRef
  
  public void setImageExperimenterRef(java.lang.String experimenter, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterRef property of Image.
  
  Specified by:
  
  setImageExperimenterRef in interface MetadataStore
  
  Parameters:
  
  experimenter - ExperimenterRef to set.
  
  imageIndex - the Image index.
- setImageID
  
  public void setImageID(java.lang.String id, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Image.
  
  Specified by:
  
  setImageID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  imageIndex - the Image index.
- setImageInstrumentRef
  
  public void setImageInstrumentRef(java.lang.String instrument, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the InstrumentRef property of Image.
  
  Specified by:
  
  setImageInstrumentRef in interface MetadataStore
  
  Parameters:
  
  instrument - InstrumentRef to set.
  
  imageIndex - the Image index.
- setImageMicrobeamManipulationRef
  
  public void setImageMicrobeamManipulationRef(java.lang.String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MicrobeamManipulationRef property of Image.
  
  Specified by:
  
  setImageMicrobeamManipulationRef in interface MetadataStore
  
  Parameters:
  
  microbeamManipulation - MicrobeamManipulationRef to set.
  
  imageIndex - the Image index.
  
  microbeamManipulationRefIndex - MicrobeamManipulationRef index (unused).
- setImageName
  
  public void setImageName(java.lang.String name, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Image.
  
  Specified by:
  
  setImageName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  imageIndex - the Image index.
- setImageROIRef
  
  public void setImageROIRef(java.lang.String roi, int imageIndex, int ROIRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ROIRef property of Image.
  
  Specified by:
  
  setImageROIRef in interface MetadataStore
  
  Parameters:
  
  roi - ROIRef to set.
  
  imageIndex - the Image index.
  
  ROIRefIndex - ROIRef index (unused).
- setImagingEnvironmentAirPressure
  
  public void setImagingEnvironmentAirPressure(Pressure airPressure, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AirPressure property of ImagingEnvironment.
  
  Specified by:
  
  setImagingEnvironmentAirPressure in interface MetadataStore
  
  Parameters:
  
  airPressure - AirPressure to set.
  
  imageIndex - the Image index.
- setImagingEnvironmentCO2Percent
  
  public void setImagingEnvironmentCO2Percent(PercentFraction co2Percent, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CO2Percent property of ImagingEnvironment.
  
  Specified by:
  
  setImagingEnvironmentCO2Percent in interface MetadataStore
  
  Parameters:
  
  co2Percent - CO2Percent to set.
  
  imageIndex - the Image index.
- setImagingEnvironmentHumidity
  
  public void setImagingEnvironmentHumidity(PercentFraction humidity, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Humidity property of ImagingEnvironment.
  
  Specified by:
  
  setImagingEnvironmentHumidity in interface MetadataStore
  
  Parameters:
  
  humidity - Humidity to set.
  
  imageIndex - the Image index.
- setImagingEnvironmentTemperature
  
  public void setImagingEnvironmentTemperature(Temperature temperature, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Temperature property of ImagingEnvironment.
  
  Specified by:
  
  setImagingEnvironmentTemperature in interface MetadataStore
  
  Parameters:
  
  temperature - Temperature to set.
  
  imageIndex - the Image index.
- setInstrumentAnnotationRef
  
  public void setInstrumentAnnotationRef(java.lang.String annotation, int instrumentIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Instrument.
  
  Specified by:
  
  setInstrumentAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setInstrumentID
  
  public void setInstrumentID(java.lang.String id, int instrumentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Instrument.
  
  Specified by:
  
  setInstrumentID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
- setLabelAnnotationRef
  
  public void setLabelAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Label.
  
  Specified by:
  
  setLabelAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setLabelFillColor
  
  public void setLabelFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Label.
  
  Specified by:
  
  setLabelFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelFillRule
  
  public void setLabelFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Label.
  
  Specified by:
  
  setLabelFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelFontFamily
  
  public void setLabelFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Label.
  
  Specified by:
  
  setLabelFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelFontSize
  
  public void setLabelFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Label.
  
  Specified by:
  
  setLabelFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelFontStyle
  
  public void setLabelFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Label.
  
  Specified by:
  
  setLabelFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelID
  
  public void setLabelID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Label.
  
  Specified by:
  
  setLabelID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelLocked
  
  public void setLabelLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Label.
  
  Specified by:
  
  setLabelLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelStrokeColor
  
  public void setLabelStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Label.
  
  Specified by:
  
  setLabelStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelStrokeDashArray
  
  public void setLabelStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Label.
  
  Specified by:
  
  setLabelStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelStrokeWidth
  
  public void setLabelStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Label.
  
  Specified by:
  
  setLabelStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelText
  
  public void setLabelText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Label.
  
  Specified by:
  
  setLabelText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelTheC
  
  public void setLabelTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Label.
  
  Specified by:
  
  setLabelTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelTheT
  
  public void setLabelTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Label.
  
  Specified by:
  
  setLabelTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelTheZ
  
  public void setLabelTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Label.
  
  Specified by:
  
  setLabelTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelTransform
  
  public void setLabelTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Label.
  
  Specified by:
  
  setLabelTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelX
  
  public void setLabelX(java.lang.Double x, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X property of Label.
  
  Specified by:
  
  setLabelX in interface MetadataStore
  
  Parameters:
  
  x - X to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLabelY
  
  public void setLabelY(java.lang.Double y, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y property of Label.
  
  Specified by:
  
  setLabelY in interface MetadataStore
  
  Parameters:
  
  y - Y to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLaserAnnotationRef
  
  public void setLaserAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Laser.
  
  Specified by:
  
  setLaserAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setLaserFrequencyMultiplication
  
  public void setLaserFrequencyMultiplication(PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FrequencyMultiplication property of Laser.
  
  Specified by:
  
  setLaserFrequencyMultiplication in interface MetadataStore
  
  Parameters:
  
  frequencyMultiplication - FrequencyMultiplication to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserID
  
  public void setLaserID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Laser.
  
  Specified by:
  
  setLaserID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserLaserMedium
  
  public void setLaserLaserMedium(LaserMedium laserMedium, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LaserMedium property of Laser.
  
  Specified by:
  
  setLaserLaserMedium in interface MetadataStore
  
  Parameters:
  
  laserMedium - LaserMedium to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserLotNumber
  
  public void setLaserLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Laser.
  
  Specified by:
  
  setLaserLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserManufacturer
  
  public void setLaserManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Laser.
  
  Specified by:
  
  setLaserManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserModel
  
  public void setLaserModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Laser.
  
  Specified by:
  
  setLaserModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserPockelCell
  
  public void setLaserPockelCell(java.lang.Boolean pockelCell, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PockelCell property of Laser.
  
  Specified by:
  
  setLaserPockelCell in interface MetadataStore
  
  Parameters:
  
  pockelCell - PockelCell to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserPower
  
  public void setLaserPower(Power power, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Power property of Laser.
  
  Specified by:
  
  setLaserPower in interface MetadataStore
  
  Parameters:
  
  power - Power to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserPulse
  
  public void setLaserPulse(Pulse pulse, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Pulse property of Laser.
  
  Specified by:
  
  setLaserPulse in interface MetadataStore
  
  Parameters:
  
  pulse - Pulse to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserPump
  
  public void setLaserPump(java.lang.String pump, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Pump property of Laser.
  
  Specified by:
  
  setLaserPump in interface MetadataStore
  
  Parameters:
  
  pump - Pump to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserRepetitionRate
  
  public void setLaserRepetitionRate(Frequency repetitionRate, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the RepetitionRate property of Laser.
  
  Specified by:
  
  setLaserRepetitionRate in interface MetadataStore
  
  Parameters:
  
  repetitionRate - RepetitionRate to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserSerialNumber
  
  public void setLaserSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Laser.
  
  Specified by:
  
  setLaserSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserTuneable
  
  public void setLaserTuneable(java.lang.Boolean tuneable, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Tuneable property of Laser.
  
  Specified by:
  
  setLaserTuneable in interface MetadataStore
  
  Parameters:
  
  tuneable - Tuneable to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserType
  
  public void setLaserType(LaserType type, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Laser.
  
  Specified by:
  
  setLaserType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLaserWavelength
  
  public void setLaserWavelength(Length wavelength, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Wavelength property of Laser.
  
  Specified by:
  
  setLaserWavelength in interface MetadataStore
  
  Parameters:
  
  wavelength - Wavelength to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightEmittingDiodeAnnotationRef
  
  public void setLightEmittingDiodeAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodeAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setLightEmittingDiodeID
  
  public void setLightEmittingDiodeID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodeID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightEmittingDiodeLotNumber
  
  public void setLightEmittingDiodeLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodeLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightEmittingDiodeManufacturer
  
  public void setLightEmittingDiodeManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodeManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightEmittingDiodeModel
  
  public void setLightEmittingDiodeModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodeModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightEmittingDiodePower
  
  public void setLightEmittingDiodePower(Power power, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Power property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodePower in interface MetadataStore
  
  Parameters:
  
  power - Power to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightEmittingDiodeSerialNumber
  
  public void setLightEmittingDiodeSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of LightEmittingDiode.
  
  Specified by:
  
  setLightEmittingDiodeSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  lightSourceIndex - the LightSource index.
- setLightPathAnnotationRef
  
  public void setLightPathAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of LightPath.
  
  Specified by:
  
  setLightPathAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setLightPathDichroicRef
  
  public void setLightPathDichroicRef(java.lang.String dichroic, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the DichroicRef property of LightPath.
  
  Specified by:
  
  setLightPathDichroicRef in interface MetadataStore
  
  Parameters:
  
  dichroic - DichroicRef to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setLightPathEmissionFilterRef
  
  public void setLightPathEmissionFilterRef(java.lang.String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the EmissionFilterRef property of LightPath.
  
  Specified by:
  
  setLightPathEmissionFilterRef in interface MetadataStore
  
  Parameters:
  
  emissionFilter - EmissionFilterRef to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  emissionFilterRefIndex - EmissionFilterRef index (unused).
- setLightPathExcitationFilterRef
  
  public void setLightPathExcitationFilterRef(java.lang.String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExcitationFilterRef property of LightPath.
  
  Specified by:
  
  setLightPathExcitationFilterRef in interface MetadataStore
  
  Parameters:
  
  excitationFilter - ExcitationFilterRef to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
  
  excitationFilterRefIndex - ExcitationFilterRef index (unused).
- setChannelLightSourceSettingsAttenuation
  
  public void setChannelLightSourceSettingsAttenuation(PercentFraction attenuation, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Attenuation property of LightSourceSettings.
  
  Specified by:
  
  setChannelLightSourceSettingsAttenuation in interface MetadataStore
  
  Parameters:
  
  attenuation - Attenuation to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setMicrobeamManipulationLightSourceSettingsAttenuation
  
  public void setMicrobeamManipulationLightSourceSettingsAttenuation(PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Attenuation property of LightSourceSettings.
  
  Specified by:
  
  setMicrobeamManipulationLightSourceSettingsAttenuation in interface MetadataStore
  
  Parameters:
  
  attenuation - Attenuation to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  lightSourceSettingsIndex - the LightSourceSettings index.
- setChannelLightSourceSettingsID
  
  public void setChannelLightSourceSettingsID(java.lang.String id, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of LightSourceSettings.
  
  Specified by:
  
  setChannelLightSourceSettingsID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setMicrobeamManipulationLightSourceSettingsID
  
  public void setMicrobeamManipulationLightSourceSettingsID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of LightSourceSettings.
  
  Specified by:
  
  setMicrobeamManipulationLightSourceSettingsID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  lightSourceSettingsIndex - the LightSourceSettings index.
- setChannelLightSourceSettingsWavelength
  
  public void setChannelLightSourceSettingsWavelength(Length wavelength, int imageIndex, int channelIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Wavelength property of LightSourceSettings.
  
  Specified by:
  
  setChannelLightSourceSettingsWavelength in interface MetadataStore
  
  Parameters:
  
  wavelength - Wavelength to set.
  
  imageIndex - the Image index.
  
  channelIndex - the Channel index.
- setMicrobeamManipulationLightSourceSettingsWavelength
  
  public void setMicrobeamManipulationLightSourceSettingsWavelength(Length wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Wavelength property of LightSourceSettings.
  
  Specified by:
  
  setMicrobeamManipulationLightSourceSettingsWavelength in interface MetadataStore
  
  Parameters:
  
  wavelength - Wavelength to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  lightSourceSettingsIndex - the LightSourceSettings index.
- setLineAnnotationRef
  
  public void setLineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Line.
  
  Specified by:
  
  setLineAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setLineFillColor
  
  public void setLineFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Line.
  
  Specified by:
  
  setLineFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineFillRule
  
  public void setLineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Line.
  
  Specified by:
  
  setLineFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineFontFamily
  
  public void setLineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Line.
  
  Specified by:
  
  setLineFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineFontSize
  
  public void setLineFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Line.
  
  Specified by:
  
  setLineFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineFontStyle
  
  public void setLineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Line.
  
  Specified by:
  
  setLineFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineID
  
  public void setLineID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Line.
  
  Specified by:
  
  setLineID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineLocked
  
  public void setLineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Line.
  
  Specified by:
  
  setLineLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineMarkerEnd
  
  public void setLineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MarkerEnd property of Line.
  
  Specified by:
  
  setLineMarkerEnd in interface MetadataStore
  
  Parameters:
  
  markerEnd - MarkerEnd to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineMarkerStart
  
  public void setLineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MarkerStart property of Line.
  
  Specified by:
  
  setLineMarkerStart in interface MetadataStore
  
  Parameters:
  
  markerStart - MarkerStart to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineStrokeColor
  
  public void setLineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Line.
  
  Specified by:
  
  setLineStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineStrokeDashArray
  
  public void setLineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Line.
  
  Specified by:
  
  setLineStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineStrokeWidth
  
  public void setLineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Line.
  
  Specified by:
  
  setLineStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineText
  
  public void setLineText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Line.
  
  Specified by:
  
  setLineText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineTheC
  
  public void setLineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Line.
  
  Specified by:
  
  setLineTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineTheT
  
  public void setLineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Line.
  
  Specified by:
  
  setLineTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineTheZ
  
  public void setLineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Line.
  
  Specified by:
  
  setLineTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineTransform
  
  public void setLineTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Line.
  
  Specified by:
  
  setLineTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineX1
  
  public void setLineX1(java.lang.Double x1, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X1 property of Line.
  
  Specified by:
  
  setLineX1 in interface MetadataStore
  
  Parameters:
  
  x1 - X1 to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineX2
  
  public void setLineX2(java.lang.Double x2, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X2 property of Line.
  
  Specified by:
  
  setLineX2 in interface MetadataStore
  
  Parameters:
  
  x2 - X2 to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineY1
  
  public void setLineY1(java.lang.Double y1, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y1 property of Line.
  
  Specified by:
  
  setLineY1 in interface MetadataStore
  
  Parameters:
  
  y1 - Y1 to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setLineY2
  
  public void setLineY2(java.lang.Double y2, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y2 property of Line.
  
  Specified by:
  
  setLineY2 in interface MetadataStore
  
  Parameters:
  
  y2 - Y2 to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setListAnnotationAnnotationRef
  
  public void setListAnnotationAnnotationRef(java.lang.String annotation, int listAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of ListAnnotation.
  
  Specified by:
  
  setListAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  listAnnotationIndex - the ListAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setListAnnotationAnnotator
  
  public void setListAnnotationAnnotator(java.lang.String annotator, int listAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of ListAnnotation.
  
  Specified by:
  
  setListAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  listAnnotationIndex - the ListAnnotation index.
- setListAnnotationDescription
  
  public void setListAnnotationDescription(java.lang.String description, int listAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of ListAnnotation.
  
  Specified by:
  
  setListAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  listAnnotationIndex - the ListAnnotation index.
- setListAnnotationID
  
  public void setListAnnotationID(java.lang.String id, int listAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of ListAnnotation.
  
  Specified by:
  
  setListAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  listAnnotationIndex - the ListAnnotation index.
- setListAnnotationNamespace
  
  public void setListAnnotationNamespace(java.lang.String namespace, int listAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of ListAnnotation.
  
  Specified by:
  
  setListAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  listAnnotationIndex - the ListAnnotation index.
- setLongAnnotationAnnotationRef
  
  public void setLongAnnotationAnnotationRef(java.lang.String annotation, int longAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of LongAnnotation.
  
  Specified by:
  
  setLongAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  longAnnotationIndex - the LongAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setLongAnnotationAnnotator
  
  public void setLongAnnotationAnnotator(java.lang.String annotator, int longAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of LongAnnotation.
  
  Specified by:
  
  setLongAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  longAnnotationIndex - the LongAnnotation index.
- setLongAnnotationDescription
  
  public void setLongAnnotationDescription(java.lang.String description, int longAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of LongAnnotation.
  
  Specified by:
  
  setLongAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  longAnnotationIndex - the LongAnnotation index.
- setLongAnnotationID
  
  public void setLongAnnotationID(java.lang.String id, int longAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of LongAnnotation.
  
  Specified by:
  
  setLongAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  longAnnotationIndex - the LongAnnotation index.
- setLongAnnotationNamespace
  
  public void setLongAnnotationNamespace(java.lang.String namespace, int longAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of LongAnnotation.
  
  Specified by:
  
  setLongAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  longAnnotationIndex - the LongAnnotation index.
- setLongAnnotationValue
  
  public void setLongAnnotationValue(java.lang.Long value, int longAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of LongAnnotation.
  
  Specified by:
  
  setLongAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  longAnnotationIndex - the LongAnnotation index.
- setMapAnnotationAnnotationRef
  
  public void setMapAnnotationAnnotationRef(java.lang.String annotation, int mapAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of MapAnnotation.
  
  Specified by:
  
  setMapAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  mapAnnotationIndex - the MapAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setMapAnnotationAnnotator
  
  public void setMapAnnotationAnnotator(java.lang.String annotator, int mapAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of MapAnnotation.
  
  Specified by:
  
  setMapAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  mapAnnotationIndex - the MapAnnotation index.
- setMapAnnotationDescription
  
  public void setMapAnnotationDescription(java.lang.String description, int mapAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of MapAnnotation.
  
  Specified by:
  
  setMapAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  mapAnnotationIndex - the MapAnnotation index.
- setMapAnnotationID
  
  public void setMapAnnotationID(java.lang.String id, int mapAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of MapAnnotation.
  
  Specified by:
  
  setMapAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  mapAnnotationIndex - the MapAnnotation index.
- setMapAnnotationNamespace
  
  public void setMapAnnotationNamespace(java.lang.String namespace, int mapAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of MapAnnotation.
  
  Specified by:
  
  setMapAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  mapAnnotationIndex - the MapAnnotation index.
- setMaskAnnotationRef
  
  public void setMaskAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Mask.
  
  Specified by:
  
  setMaskAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setMaskFillColor
  
  public void setMaskFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Mask.
  
  Specified by:
  
  setMaskFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskFillRule
  
  public void setMaskFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Mask.
  
  Specified by:
  
  setMaskFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskFontFamily
  
  public void setMaskFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Mask.
  
  Specified by:
  
  setMaskFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskFontSize
  
  public void setMaskFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Mask.
  
  Specified by:
  
  setMaskFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskFontStyle
  
  public void setMaskFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Mask.
  
  Specified by:
  
  setMaskFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskHeight
  
  public void setMaskHeight(java.lang.Double height, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Height property of Mask.
  
  Specified by:
  
  setMaskHeight in interface MetadataStore
  
  Parameters:
  
  height - Height to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskID
  
  public void setMaskID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Mask.
  
  Specified by:
  
  setMaskID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskLocked
  
  public void setMaskLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Mask.
  
  Specified by:
  
  setMaskLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskStrokeColor
  
  public void setMaskStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Mask.
  
  Specified by:
  
  setMaskStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskStrokeDashArray
  
  public void setMaskStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Mask.
  
  Specified by:
  
  setMaskStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskStrokeWidth
  
  public void setMaskStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Mask.
  
  Specified by:
  
  setMaskStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskText
  
  public void setMaskText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Mask.
  
  Specified by:
  
  setMaskText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskTheC
  
  public void setMaskTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Mask.
  
  Specified by:
  
  setMaskTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskTheT
  
  public void setMaskTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Mask.
  
  Specified by:
  
  setMaskTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskTheZ
  
  public void setMaskTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Mask.
  
  Specified by:
  
  setMaskTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskTransform
  
  public void setMaskTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Mask.
  
  Specified by:
  
  setMaskTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskWidth
  
  public void setMaskWidth(java.lang.Double width, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Width property of Mask.
  
  Specified by:
  
  setMaskWidth in interface MetadataStore
  
  Parameters:
  
  width - Width to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskX
  
  public void setMaskX(java.lang.Double x, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X property of Mask.
  
  Specified by:
  
  setMaskX in interface MetadataStore
  
  Parameters:
  
  x - X to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMaskY
  
  public void setMaskY(java.lang.Double y, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y property of Mask.
  
  Specified by:
  
  setMaskY in interface MetadataStore
  
  Parameters:
  
  y - Y to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setMicrobeamManipulationDescription
  
  public void setMicrobeamManipulationDescription(java.lang.String description, int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of MicrobeamManipulation.
  
  Specified by:
  
  setMicrobeamManipulationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
- setMicrobeamManipulationExperimenterRef
  
  public void setMicrobeamManipulationExperimenterRef(java.lang.String experimenter, int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterRef property of MicrobeamManipulation.
  
  Specified by:
  
  setMicrobeamManipulationExperimenterRef in interface MetadataStore
  
  Parameters:
  
  experimenter - ExperimenterRef to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
- setMicrobeamManipulationID
  
  public void setMicrobeamManipulationID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of MicrobeamManipulation.
  
  Specified by:
  
  setMicrobeamManipulationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
- setMicrobeamManipulationROIRef
  
  public void setMicrobeamManipulationROIRef(java.lang.String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ROIRef property of MicrobeamManipulation.
  
  Specified by:
  
  setMicrobeamManipulationROIRef in interface MetadataStore
  
  Parameters:
  
  roi - ROIRef to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
  
  ROIRefIndex - ROIRef index (unused).
- setMicrobeamManipulationType
  
  public void setMicrobeamManipulationType(MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of MicrobeamManipulation.
  
  Specified by:
  
  setMicrobeamManipulationType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  experimentIndex - the Experiment index.
  
  microbeamManipulationIndex - the MicrobeamManipulation index.
- setMicroscopeLotNumber
  
  public void setMicroscopeLotNumber(java.lang.String lotNumber, int instrumentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Microscope.
  
  Specified by:
  
  setMicroscopeLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
- setMicroscopeManufacturer
  
  public void setMicroscopeManufacturer(java.lang.String manufacturer, int instrumentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Microscope.
  
  Specified by:
  
  setMicroscopeManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
- setMicroscopeModel
  
  public void setMicroscopeModel(java.lang.String model, int instrumentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Microscope.
  
  Specified by:
  
  setMicroscopeModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
- setMicroscopeSerialNumber
  
  public void setMicroscopeSerialNumber(java.lang.String serialNumber, int instrumentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Microscope.
  
  Specified by:
  
  setMicroscopeSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
- setMicroscopeType
  
  public void setMicroscopeType(MicroscopeType type, int instrumentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Microscope.
  
  Specified by:
  
  setMicroscopeType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  instrumentIndex - the Instrument index.
- setObjectiveAnnotationRef
  
  public void setObjectiveAnnotationRef(java.lang.String annotation, int instrumentIndex, int objectiveIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Objective.
  
  Specified by:
  
  setObjectiveAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setObjectiveCalibratedMagnification
  
  public void setObjectiveCalibratedMagnification(java.lang.Double calibratedMagnification, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CalibratedMagnification property of Objective.
  
  Specified by:
  
  setObjectiveCalibratedMagnification in interface MetadataStore
  
  Parameters:
  
  calibratedMagnification - CalibratedMagnification to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveCorrection
  
  public void setObjectiveCorrection(Correction correction, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Correction property of Objective.
  
  Specified by:
  
  setObjectiveCorrection in interface MetadataStore
  
  Parameters:
  
  correction - Correction to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveID
  
  public void setObjectiveID(java.lang.String id, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Objective.
  
  Specified by:
  
  setObjectiveID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveImmersion
  
  public void setObjectiveImmersion(Immersion immersion, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Immersion property of Objective.
  
  Specified by:
  
  setObjectiveImmersion in interface MetadataStore
  
  Parameters:
  
  immersion - Immersion to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveIris
  
  public void setObjectiveIris(java.lang.Boolean iris, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Iris property of Objective.
  
  Specified by:
  
  setObjectiveIris in interface MetadataStore
  
  Parameters:
  
  iris - Iris to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveLensNA
  
  public void setObjectiveLensNA(java.lang.Double lensNA, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LensNA property of Objective.
  
  Specified by:
  
  setObjectiveLensNA in interface MetadataStore
  
  Parameters:
  
  lensNA - LensNA to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveLotNumber
  
  public void setObjectiveLotNumber(java.lang.String lotNumber, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the LotNumber property of Objective.
  
  Specified by:
  
  setObjectiveLotNumber in interface MetadataStore
  
  Parameters:
  
  lotNumber - LotNumber to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveManufacturer
  
  public void setObjectiveManufacturer(java.lang.String manufacturer, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Manufacturer property of Objective.
  
  Specified by:
  
  setObjectiveManufacturer in interface MetadataStore
  
  Parameters:
  
  manufacturer - Manufacturer to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveModel
  
  public void setObjectiveModel(java.lang.String model, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Model property of Objective.
  
  Specified by:
  
  setObjectiveModel in interface MetadataStore
  
  Parameters:
  
  model - Model to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveNominalMagnification
  
  public void setObjectiveNominalMagnification(java.lang.Double nominalMagnification, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the NominalMagnification property of Objective.
  
  Specified by:
  
  setObjectiveNominalMagnification in interface MetadataStore
  
  Parameters:
  
  nominalMagnification - NominalMagnification to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveSerialNumber
  
  public void setObjectiveSerialNumber(java.lang.String serialNumber, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SerialNumber property of Objective.
  
  Specified by:
  
  setObjectiveSerialNumber in interface MetadataStore
  
  Parameters:
  
  serialNumber - SerialNumber to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveWorkingDistance
  
  public void setObjectiveWorkingDistance(Length workingDistance, int instrumentIndex, int objectiveIndex)
  
  Description copied from interface: MetadataStore
  
  Set the WorkingDistance property of Objective.
  
  Specified by:
  
  setObjectiveWorkingDistance in interface MetadataStore
  
  Parameters:
  
  workingDistance - WorkingDistance to set.
  
  instrumentIndex - the Instrument index.
  
  objectiveIndex - the Objective index.
- setObjectiveSettingsCorrectionCollar
  
  public void setObjectiveSettingsCorrectionCollar(java.lang.Double correctionCollar, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CorrectionCollar property of ObjectiveSettings.
  
  Specified by:
  
  setObjectiveSettingsCorrectionCollar in interface MetadataStore
  
  Parameters:
  
  correctionCollar - CorrectionCollar to set.
  
  imageIndex - the Image index.
- setObjectiveSettingsID
  
  public void setObjectiveSettingsID(java.lang.String id, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of ObjectiveSettings.
  
  Specified by:
  
  setObjectiveSettingsID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  imageIndex - the Image index.
- setObjectiveSettingsMedium
  
  public void setObjectiveSettingsMedium(Medium medium, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Medium property of ObjectiveSettings.
  
  Specified by:
  
  setObjectiveSettingsMedium in interface MetadataStore
  
  Parameters:
  
  medium - Medium to set.
  
  imageIndex - the Image index.
- setObjectiveSettingsRefractiveIndex
  
  public void setObjectiveSettingsRefractiveIndex(java.lang.Double refractiveIndex, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the RefractiveIndex property of ObjectiveSettings.
  
  Specified by:
  
  setObjectiveSettingsRefractiveIndex in interface MetadataStore
  
  Parameters:
  
  refractiveIndex - RefractiveIndex to set.
  
  imageIndex - the Image index.
- setPixelsBigEndian
  
  public void setPixelsBigEndian(java.lang.Boolean bigEndian, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the BigEndian property of Pixels.
  
  Specified by:
  
  setPixelsBigEndian in interface MetadataStore
  
  Parameters:
  
  bigEndian - BigEndian to set.
  
  imageIndex - the Image index.
- setPixelsDimensionOrder
  
  public void setPixelsDimensionOrder(DimensionOrder dimensionOrder, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the DimensionOrder property of Pixels.
  
  Specified by:
  
  setPixelsDimensionOrder in interface MetadataStore
  
  Parameters:
  
  dimensionOrder - DimensionOrder to set.
  
  imageIndex - the Image index.
- setPixelsID
  
  public void setPixelsID(java.lang.String id, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Pixels.
  
  Specified by:
  
  setPixelsID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  imageIndex - the Image index.
- setPixelsInterleaved
  
  public void setPixelsInterleaved(java.lang.Boolean interleaved, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Interleaved property of Pixels.
  
  Specified by:
  
  setPixelsInterleaved in interface MetadataStore
  
  Parameters:
  
  interleaved - Interleaved to set.
  
  imageIndex - the Image index.
- setPixelsPhysicalSizeX
  
  public void setPixelsPhysicalSizeX(Length physicalSizeX, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PhysicalSizeX property of Pixels.
  
  Specified by:
  
  setPixelsPhysicalSizeX in interface MetadataStore
  
  Parameters:
  
  physicalSizeX - PhysicalSizeX to set.
  
  imageIndex - the Image index.
- setPixelsPhysicalSizeY
  
  public void setPixelsPhysicalSizeY(Length physicalSizeY, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PhysicalSizeY property of Pixels.
  
  Specified by:
  
  setPixelsPhysicalSizeY in interface MetadataStore
  
  Parameters:
  
  physicalSizeY - PhysicalSizeY to set.
  
  imageIndex - the Image index.
- setPixelsPhysicalSizeZ
  
  public void setPixelsPhysicalSizeZ(Length physicalSizeZ, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PhysicalSizeZ property of Pixels.
  
  Specified by:
  
  setPixelsPhysicalSizeZ in interface MetadataStore
  
  Parameters:
  
  physicalSizeZ - PhysicalSizeZ to set.
  
  imageIndex - the Image index.
- setPixelsSignificantBits
  
  public void setPixelsSignificantBits(PositiveInteger significantBits, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SignificantBits property of Pixels.
  
  Specified by:
  
  setPixelsSignificantBits in interface MetadataStore
  
  Parameters:
  
  significantBits - SignificantBits to set.
  
  imageIndex - the Image index.
- setPixelsSizeC
  
  public void setPixelsSizeC(PositiveInteger sizeC, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SizeC property of Pixels.
  
  Specified by:
  
  setPixelsSizeC in interface MetadataStore
  
  Parameters:
  
  sizeC - SizeC to set.
  
  imageIndex - the Image index.
- setPixelsSizeT
  
  public void setPixelsSizeT(PositiveInteger sizeT, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SizeT property of Pixels.
  
  Specified by:
  
  setPixelsSizeT in interface MetadataStore
  
  Parameters:
  
  sizeT - SizeT to set.
  
  imageIndex - the Image index.
- setPixelsSizeX
  
  public void setPixelsSizeX(PositiveInteger sizeX, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SizeX property of Pixels.
  
  Specified by:
  
  setPixelsSizeX in interface MetadataStore
  
  Parameters:
  
  sizeX - SizeX to set.
  
  imageIndex - the Image index.
- setPixelsSizeY
  
  public void setPixelsSizeY(PositiveInteger sizeY, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SizeY property of Pixels.
  
  Specified by:
  
  setPixelsSizeY in interface MetadataStore
  
  Parameters:
  
  sizeY - SizeY to set.
  
  imageIndex - the Image index.
- setPixelsSizeZ
  
  public void setPixelsSizeZ(PositiveInteger sizeZ, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the SizeZ property of Pixels.
  
  Specified by:
  
  setPixelsSizeZ in interface MetadataStore
  
  Parameters:
  
  sizeZ - SizeZ to set.
  
  imageIndex - the Image index.
- setPixelsTimeIncrement
  
  public void setPixelsTimeIncrement(Time timeIncrement, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TimeIncrement property of Pixels.
  
  Specified by:
  
  setPixelsTimeIncrement in interface MetadataStore
  
  Parameters:
  
  timeIncrement - TimeIncrement to set.
  
  imageIndex - the Image index.
- setPixelsType
  
  public void setPixelsType(PixelType type, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Pixels.
  
  Specified by:
  
  setPixelsType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  imageIndex - the Image index.
- setPlaneAnnotationRef
  
  public void setPlaneAnnotationRef(java.lang.String annotation, int imageIndex, int planeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Plane.
  
  Specified by:
  
  setPlaneAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setPlaneDeltaT
  
  public void setPlaneDeltaT(Time deltaT, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the DeltaT property of Plane.
  
  Specified by:
  
  setPlaneDeltaT in interface MetadataStore
  
  Parameters:
  
  deltaT - DeltaT to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlaneExposureTime
  
  public void setPlaneExposureTime(Time exposureTime, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExposureTime property of Plane.
  
  Specified by:
  
  setPlaneExposureTime in interface MetadataStore
  
  Parameters:
  
  exposureTime - ExposureTime to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlaneHashSHA1
  
  public void setPlaneHashSHA1(java.lang.String hashSHA1, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the HashSHA1 property of Plane.
  
  Specified by:
  
  setPlaneHashSHA1 in interface MetadataStore
  
  Parameters:
  
  hashSHA1 - HashSHA1 to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlanePositionX
  
  public void setPlanePositionX(Length positionX, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PositionX property of Plane.
  
  Specified by:
  
  setPlanePositionX in interface MetadataStore
  
  Parameters:
  
  positionX - PositionX to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlanePositionY
  
  public void setPlanePositionY(Length positionY, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PositionY property of Plane.
  
  Specified by:
  
  setPlanePositionY in interface MetadataStore
  
  Parameters:
  
  positionY - PositionY to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlanePositionZ
  
  public void setPlanePositionZ(Length positionZ, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PositionZ property of Plane.
  
  Specified by:
  
  setPlanePositionZ in interface MetadataStore
  
  Parameters:
  
  positionZ - PositionZ to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlaneTheC
  
  public void setPlaneTheC(NonNegativeInteger theC, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Plane.
  
  Specified by:
  
  setPlaneTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlaneTheT
  
  public void setPlaneTheT(NonNegativeInteger theT, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Plane.
  
  Specified by:
  
  setPlaneTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlaneTheZ
  
  public void setPlaneTheZ(NonNegativeInteger theZ, int imageIndex, int planeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Plane.
  
  Specified by:
  
  setPlaneTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  imageIndex - the Image index.
  
  planeIndex - the Plane index.
- setPlateAnnotationRef
  
  public void setPlateAnnotationRef(java.lang.String annotation, int plateIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Plate.
  
  Specified by:
  
  setPlateAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  plateIndex - the Plate index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setPlateColumnNamingConvention
  
  public void setPlateColumnNamingConvention(NamingConvention columnNamingConvention, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ColumnNamingConvention property of Plate.
  
  Specified by:
  
  setPlateColumnNamingConvention in interface MetadataStore
  
  Parameters:
  
  columnNamingConvention - ColumnNamingConvention to set.
  
  plateIndex - the Plate index.
- setPlateColumns
  
  public void setPlateColumns(PositiveInteger columns, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Columns property of Plate.
  
  Specified by:
  
  setPlateColumns in interface MetadataStore
  
  Parameters:
  
  columns - Columns to set.
  
  plateIndex - the Plate index.
- setPlateDescription
  
  public void setPlateDescription(java.lang.String description, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Plate.
  
  Specified by:
  
  setPlateDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  plateIndex - the Plate index.
- setPlateExternalIdentifier
  
  public void setPlateExternalIdentifier(java.lang.String externalIdentifier, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExternalIdentifier property of Plate.
  
  Specified by:
  
  setPlateExternalIdentifier in interface MetadataStore
  
  Parameters:
  
  externalIdentifier - ExternalIdentifier to set.
  
  plateIndex - the Plate index.
- setPlateFieldIndex
  
  public void setPlateFieldIndex(NonNegativeInteger fieldIndex, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FieldIndex property of Plate.
  
  Specified by:
  
  setPlateFieldIndex in interface MetadataStore
  
  Parameters:
  
  fieldIndex - FieldIndex to set.
  
  plateIndex - the Plate index.
- setPlateID
  
  public void setPlateID(java.lang.String id, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Plate.
  
  Specified by:
  
  setPlateID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  plateIndex - the Plate index.
- setPlateName
  
  public void setPlateName(java.lang.String name, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Plate.
  
  Specified by:
  
  setPlateName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  plateIndex - the Plate index.
- setPlateRowNamingConvention
  
  public void setPlateRowNamingConvention(NamingConvention rowNamingConvention, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the RowNamingConvention property of Plate.
  
  Specified by:
  
  setPlateRowNamingConvention in interface MetadataStore
  
  Parameters:
  
  rowNamingConvention - RowNamingConvention to set.
  
  plateIndex - the Plate index.
- setPlateRows
  
  public void setPlateRows(PositiveInteger rows, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Rows property of Plate.
  
  Specified by:
  
  setPlateRows in interface MetadataStore
  
  Parameters:
  
  rows - Rows to set.
  
  plateIndex - the Plate index.
- setPlateStatus
  
  public void setPlateStatus(java.lang.String status, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Status property of Plate.
  
  Specified by:
  
  setPlateStatus in interface MetadataStore
  
  Parameters:
  
  status - Status to set.
  
  plateIndex - the Plate index.
- setPlateWellOriginX
  
  public void setPlateWellOriginX(Length wellOriginX, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the WellOriginX property of Plate.
  
  Specified by:
  
  setPlateWellOriginX in interface MetadataStore
  
  Parameters:
  
  wellOriginX - WellOriginX to set.
  
  plateIndex - the Plate index.
- setPlateWellOriginY
  
  public void setPlateWellOriginY(Length wellOriginY, int plateIndex)
  
  Description copied from interface: MetadataStore
  
  Set the WellOriginY property of Plate.
  
  Specified by:
  
  setPlateWellOriginY in interface MetadataStore
  
  Parameters:
  
  wellOriginY - WellOriginY to set.
  
  plateIndex - the Plate index.
- setPlateAcquisitionAnnotationRef
  
  public void setPlateAcquisitionAnnotationRef(java.lang.String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setPlateAcquisitionDescription
  
  public void setPlateAcquisitionDescription(java.lang.String description, int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
- setPlateAcquisitionEndTime
  
  public void setPlateAcquisitionEndTime(Timestamp endTime, int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataStore
  
  Set the EndTime property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionEndTime in interface MetadataStore
  
  Parameters:
  
  endTime - EndTime to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
- setPlateAcquisitionID
  
  public void setPlateAcquisitionID(java.lang.String id, int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
- setPlateAcquisitionMaximumFieldCount
  
  public void setPlateAcquisitionMaximumFieldCount(PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MaximumFieldCount property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionMaximumFieldCount in interface MetadataStore
  
  Parameters:
  
  maximumFieldCount - MaximumFieldCount to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
- setPlateAcquisitionName
  
  public void setPlateAcquisitionName(java.lang.String name, int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
- setPlateAcquisitionStartTime
  
  public void setPlateAcquisitionStartTime(Timestamp startTime, int plateIndex, int plateAcquisitionIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StartTime property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionStartTime in interface MetadataStore
  
  Parameters:
  
  startTime - StartTime to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
- setPlateAcquisitionWellSampleRef
  
  public void setPlateAcquisitionWellSampleRef(java.lang.String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the WellSampleRef property of PlateAcquisition.
  
  Specified by:
  
  setPlateAcquisitionWellSampleRef in interface MetadataStore
  
  Parameters:
  
  wellSample - WellSampleRef to set.
  
  plateIndex - the Plate index.
  
  plateAcquisitionIndex - the PlateAcquisition index.
  
  wellSampleRefIndex - WellSampleRef index (unused).
- setPointAnnotationRef
  
  public void setPointAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Point.
  
  Specified by:
  
  setPointAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setPointFillColor
  
  public void setPointFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Point.
  
  Specified by:
  
  setPointFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointFillRule
  
  public void setPointFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Point.
  
  Specified by:
  
  setPointFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointFontFamily
  
  public void setPointFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Point.
  
  Specified by:
  
  setPointFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointFontSize
  
  public void setPointFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Point.
  
  Specified by:
  
  setPointFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointFontStyle
  
  public void setPointFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Point.
  
  Specified by:
  
  setPointFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointID
  
  public void setPointID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Point.
  
  Specified by:
  
  setPointID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointLocked
  
  public void setPointLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Point.
  
  Specified by:
  
  setPointLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointStrokeColor
  
  public void setPointStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Point.
  
  Specified by:
  
  setPointStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointStrokeDashArray
  
  public void setPointStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Point.
  
  Specified by:
  
  setPointStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointStrokeWidth
  
  public void setPointStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Point.
  
  Specified by:
  
  setPointStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointText
  
  public void setPointText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Point.
  
  Specified by:
  
  setPointText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointTheC
  
  public void setPointTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Point.
  
  Specified by:
  
  setPointTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointTheT
  
  public void setPointTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Point.
  
  Specified by:
  
  setPointTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointTheZ
  
  public void setPointTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Point.
  
  Specified by:
  
  setPointTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointTransform
  
  public void setPointTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Point.
  
  Specified by:
  
  setPointTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointX
  
  public void setPointX(java.lang.Double x, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X property of Point.
  
  Specified by:
  
  setPointX in interface MetadataStore
  
  Parameters:
  
  x - X to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPointY
  
  public void setPointY(java.lang.Double y, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y property of Point.
  
  Specified by:
  
  setPointY in interface MetadataStore
  
  Parameters:
  
  y - Y to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonAnnotationRef
  
  public void setPolygonAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Polygon.
  
  Specified by:
  
  setPolygonAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setPolygonFillColor
  
  public void setPolygonFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Polygon.
  
  Specified by:
  
  setPolygonFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonFillRule
  
  public void setPolygonFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Polygon.
  
  Specified by:
  
  setPolygonFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonFontFamily
  
  public void setPolygonFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Polygon.
  
  Specified by:
  
  setPolygonFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonFontSize
  
  public void setPolygonFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Polygon.
  
  Specified by:
  
  setPolygonFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonFontStyle
  
  public void setPolygonFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Polygon.
  
  Specified by:
  
  setPolygonFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonID
  
  public void setPolygonID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Polygon.
  
  Specified by:
  
  setPolygonID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonLocked
  
  public void setPolygonLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Polygon.
  
  Specified by:
  
  setPolygonLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonPoints
  
  public void setPolygonPoints(java.lang.String points, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Points property of Polygon.
  
  Specified by:
  
  setPolygonPoints in interface MetadataStore
  
  Parameters:
  
  points - Points to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonStrokeColor
  
  public void setPolygonStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Polygon.
  
  Specified by:
  
  setPolygonStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonStrokeDashArray
  
  public void setPolygonStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Polygon.
  
  Specified by:
  
  setPolygonStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonStrokeWidth
  
  public void setPolygonStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Polygon.
  
  Specified by:
  
  setPolygonStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonText
  
  public void setPolygonText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Polygon.
  
  Specified by:
  
  setPolygonText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonTheC
  
  public void setPolygonTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Polygon.
  
  Specified by:
  
  setPolygonTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonTheT
  
  public void setPolygonTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Polygon.
  
  Specified by:
  
  setPolygonTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonTheZ
  
  public void setPolygonTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Polygon.
  
  Specified by:
  
  setPolygonTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolygonTransform
  
  public void setPolygonTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Polygon.
  
  Specified by:
  
  setPolygonTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineAnnotationRef
  
  public void setPolylineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Polyline.
  
  Specified by:
  
  setPolylineAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setPolylineFillColor
  
  public void setPolylineFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Polyline.
  
  Specified by:
  
  setPolylineFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineFillRule
  
  public void setPolylineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Polyline.
  
  Specified by:
  
  setPolylineFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineFontFamily
  
  public void setPolylineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Polyline.
  
  Specified by:
  
  setPolylineFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineFontSize
  
  public void setPolylineFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Polyline.
  
  Specified by:
  
  setPolylineFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineFontStyle
  
  public void setPolylineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Polyline.
  
  Specified by:
  
  setPolylineFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineID
  
  public void setPolylineID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Polyline.
  
  Specified by:
  
  setPolylineID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineLocked
  
  public void setPolylineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Polyline.
  
  Specified by:
  
  setPolylineLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineMarkerEnd
  
  public void setPolylineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MarkerEnd property of Polyline.
  
  Specified by:
  
  setPolylineMarkerEnd in interface MetadataStore
  
  Parameters:
  
  markerEnd - MarkerEnd to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineMarkerStart
  
  public void setPolylineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the MarkerStart property of Polyline.
  
  Specified by:
  
  setPolylineMarkerStart in interface MetadataStore
  
  Parameters:
  
  markerStart - MarkerStart to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylinePoints
  
  public void setPolylinePoints(java.lang.String points, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Points property of Polyline.
  
  Specified by:
  
  setPolylinePoints in interface MetadataStore
  
  Parameters:
  
  points - Points to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineStrokeColor
  
  public void setPolylineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Polyline.
  
  Specified by:
  
  setPolylineStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineStrokeDashArray
  
  public void setPolylineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Polyline.
  
  Specified by:
  
  setPolylineStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineStrokeWidth
  
  public void setPolylineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Polyline.
  
  Specified by:
  
  setPolylineStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineText
  
  public void setPolylineText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Polyline.
  
  Specified by:
  
  setPolylineText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineTheC
  
  public void setPolylineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Polyline.
  
  Specified by:
  
  setPolylineTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineTheT
  
  public void setPolylineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Polyline.
  
  Specified by:
  
  setPolylineTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineTheZ
  
  public void setPolylineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Polyline.
  
  Specified by:
  
  setPolylineTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setPolylineTransform
  
  public void setPolylineTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Polyline.
  
  Specified by:
  
  setPolylineTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setProjectAnnotationRef
  
  public void setProjectAnnotationRef(java.lang.String annotation, int projectIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Project.
  
  Specified by:
  
  setProjectAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  projectIndex - the Project index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setProjectDatasetRef
  
  public void setProjectDatasetRef(java.lang.String dataset, int projectIndex, int datasetRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the DatasetRef property of Project.
  
  Specified by:
  
  setProjectDatasetRef in interface MetadataStore
  
  Parameters:
  
  dataset - DatasetRef to set.
  
  projectIndex - the Project index.
  
  datasetRefIndex - DatasetRef index (unused).
- setProjectDescription
  
  public void setProjectDescription(java.lang.String description, int projectIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Project.
  
  Specified by:
  
  setProjectDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  projectIndex - the Project index.
- setProjectExperimenterGroupRef
  
  public void setProjectExperimenterGroupRef(java.lang.String experimenterGroup, int projectIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterGroupRef property of Project.
  
  Specified by:
  
  setProjectExperimenterGroupRef in interface MetadataStore
  
  Parameters:
  
  experimenterGroup - ExperimenterGroupRef to set.
  
  projectIndex - the Project index.
- setProjectExperimenterRef
  
  public void setProjectExperimenterRef(java.lang.String experimenter, int projectIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExperimenterRef property of Project.
  
  Specified by:
  
  setProjectExperimenterRef in interface MetadataStore
  
  Parameters:
  
  experimenter - ExperimenterRef to set.
  
  projectIndex - the Project index.
- setProjectID
  
  public void setProjectID(java.lang.String id, int projectIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Project.
  
  Specified by:
  
  setProjectID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  projectIndex - the Project index.
- setProjectName
  
  public void setProjectName(java.lang.String name, int projectIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Project.
  
  Specified by:
  
  setProjectName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  projectIndex - the Project index.
- setROIAnnotationRef
  
  public void setROIAnnotationRef(java.lang.String annotation, int ROIIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of ROI.
  
  Specified by:
  
  setROIAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setROIDescription
  
  public void setROIDescription(java.lang.String description, int ROIIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of ROI.
  
  Specified by:
  
  setROIDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  ROIIndex - the ROI index.
- setROIID
  
  public void setROIID(java.lang.String id, int ROIIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of ROI.
  
  Specified by:
  
  setROIID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
- setROIName
  
  public void setROIName(java.lang.String name, int ROIIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of ROI.
  
  Specified by:
  
  setROIName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  ROIIndex - the ROI index.
- setReagentAnnotationRef
  
  public void setReagentAnnotationRef(java.lang.String annotation, int screenIndex, int reagentIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Reagent.
  
  Specified by:
  
  setReagentAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setReagentDescription
  
  public void setReagentDescription(java.lang.String description, int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Reagent.
  
  Specified by:
  
  setReagentDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
- setReagentID
  
  public void setReagentID(java.lang.String id, int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Reagent.
  
  Specified by:
  
  setReagentID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
- setReagentName
  
  public void setReagentName(java.lang.String name, int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Reagent.
  
  Specified by:
  
  setReagentName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
- setReagentReagentIdentifier
  
  public void setReagentReagentIdentifier(java.lang.String reagentIdentifier, int screenIndex, int reagentIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ReagentIdentifier property of Reagent.
  
  Specified by:
  
  setReagentReagentIdentifier in interface MetadataStore
  
  Parameters:
  
  reagentIdentifier - ReagentIdentifier to set.
  
  screenIndex - the Screen index.
  
  reagentIndex - the Reagent index.
- setRectangleAnnotationRef
  
  public void setRectangleAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Rectangle.
  
  Specified by:
  
  setRectangleAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setRectangleFillColor
  
  public void setRectangleFillColor(Color fillColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillColor property of Rectangle.
  
  Specified by:
  
  setRectangleFillColor in interface MetadataStore
  
  Parameters:
  
  fillColor - FillColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleFillRule
  
  public void setRectangleFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FillRule property of Rectangle.
  
  Specified by:
  
  setRectangleFillRule in interface MetadataStore
  
  Parameters:
  
  fillRule - FillRule to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleFontFamily
  
  public void setRectangleFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontFamily property of Rectangle.
  
  Specified by:
  
  setRectangleFontFamily in interface MetadataStore
  
  Parameters:
  
  fontFamily - FontFamily to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleFontSize
  
  public void setRectangleFontSize(Length fontSize, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontSize property of Rectangle.
  
  Specified by:
  
  setRectangleFontSize in interface MetadataStore
  
  Parameters:
  
  fontSize - FontSize to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleFontStyle
  
  public void setRectangleFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FontStyle property of Rectangle.
  
  Specified by:
  
  setRectangleFontStyle in interface MetadataStore
  
  Parameters:
  
  fontStyle - FontStyle to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleHeight
  
  public void setRectangleHeight(java.lang.Double height, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Height property of Rectangle.
  
  Specified by:
  
  setRectangleHeight in interface MetadataStore
  
  Parameters:
  
  height - Height to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleID
  
  public void setRectangleID(java.lang.String id, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Rectangle.
  
  Specified by:
  
  setRectangleID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleLocked
  
  public void setRectangleLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Locked property of Rectangle.
  
  Specified by:
  
  setRectangleLocked in interface MetadataStore
  
  Parameters:
  
  locked - Locked to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleStrokeColor
  
  public void setRectangleStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeColor property of Rectangle.
  
  Specified by:
  
  setRectangleStrokeColor in interface MetadataStore
  
  Parameters:
  
  strokeColor - StrokeColor to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleStrokeDashArray
  
  public void setRectangleStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeDashArray property of Rectangle.
  
  Specified by:
  
  setRectangleStrokeDashArray in interface MetadataStore
  
  Parameters:
  
  strokeDashArray - StrokeDashArray to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleStrokeWidth
  
  public void setRectangleStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the StrokeWidth property of Rectangle.
  
  Specified by:
  
  setRectangleStrokeWidth in interface MetadataStore
  
  Parameters:
  
  strokeWidth - StrokeWidth to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleText
  
  public void setRectangleText(java.lang.String text, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Text property of Rectangle.
  
  Specified by:
  
  setRectangleText in interface MetadataStore
  
  Parameters:
  
  text - Text to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleTheC
  
  public void setRectangleTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheC property of Rectangle.
  
  Specified by:
  
  setRectangleTheC in interface MetadataStore
  
  Parameters:
  
  theC - TheC to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleTheT
  
  public void setRectangleTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheT property of Rectangle.
  
  Specified by:
  
  setRectangleTheT in interface MetadataStore
  
  Parameters:
  
  theT - TheT to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleTheZ
  
  public void setRectangleTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the TheZ property of Rectangle.
  
  Specified by:
  
  setRectangleTheZ in interface MetadataStore
  
  Parameters:
  
  theZ - TheZ to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleTransform
  
  public void setRectangleTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transform property of Rectangle.
  
  Specified by:
  
  setRectangleTransform in interface MetadataStore
  
  Parameters:
  
  transform - Transform to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleWidth
  
  public void setRectangleWidth(java.lang.Double width, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Width property of Rectangle.
  
  Specified by:
  
  setRectangleWidth in interface MetadataStore
  
  Parameters:
  
  width - Width to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleX
  
  public void setRectangleX(java.lang.Double x, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X property of Rectangle.
  
  Specified by:
  
  setRectangleX in interface MetadataStore
  
  Parameters:
  
  x - X to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRectangleY
  
  public void setRectangleY(java.lang.Double y, int ROIIndex, int shapeIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y property of Rectangle.
  
  Specified by:
  
  setRectangleY in interface MetadataStore
  
  Parameters:
  
  y - Y to set.
  
  ROIIndex - the ROI index.
  
  shapeIndex - the Shape index.
- setRightsRightsHeld
  
  public void setRightsRightsHeld(java.lang.String rightsHeld)
  
  Description copied from interface: MetadataStore
  
  Set the RightsHeld property of Rights.
  
  Specified by:
  
  setRightsRightsHeld in interface MetadataStore
  
  Parameters:
  
  rightsHeld - RightsHeld to set.
- setRightsRightsHolder
  
  public void setRightsRightsHolder(java.lang.String rightsHolder)
  
  Description copied from interface: MetadataStore
  
  Set the RightsHolder property of Rights.
  
  Specified by:
  
  setRightsRightsHolder in interface MetadataStore
  
  Parameters:
  
  rightsHolder - RightsHolder to set.
- setScreenAnnotationRef
  
  public void setScreenAnnotationRef(java.lang.String annotation, int screenIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Screen.
  
  Specified by:
  
  setScreenAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  screenIndex - the Screen index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setScreenDescription
  
  public void setScreenDescription(java.lang.String description, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of Screen.
  
  Specified by:
  
  setScreenDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  screenIndex - the Screen index.
- setScreenID
  
  public void setScreenID(java.lang.String id, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Screen.
  
  Specified by:
  
  setScreenID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  screenIndex - the Screen index.
- setScreenName
  
  public void setScreenName(java.lang.String name, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of Screen.
  
  Specified by:
  
  setScreenName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  screenIndex - the Screen index.
- setScreenPlateRef
  
  public void setScreenPlateRef(java.lang.String plate, int screenIndex, int plateRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PlateRef property of Screen.
  
  Specified by:
  
  setScreenPlateRef in interface MetadataStore
  
  Parameters:
  
  plate - PlateRef to set.
  
  screenIndex - the Screen index.
  
  plateRefIndex - PlateRef index (unused).
- setScreenProtocolDescription
  
  public void setScreenProtocolDescription(java.lang.String protocolDescription, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ProtocolDescription property of Screen.
  
  Specified by:
  
  setScreenProtocolDescription in interface MetadataStore
  
  Parameters:
  
  protocolDescription - ProtocolDescription to set.
  
  screenIndex - the Screen index.
- setScreenProtocolIdentifier
  
  public void setScreenProtocolIdentifier(java.lang.String protocolIdentifier, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ProtocolIdentifier property of Screen.
  
  Specified by:
  
  setScreenProtocolIdentifier in interface MetadataStore
  
  Parameters:
  
  protocolIdentifier - ProtocolIdentifier to set.
  
  screenIndex - the Screen index.
- setScreenReagentSetDescription
  
  public void setScreenReagentSetDescription(java.lang.String reagentSetDescription, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ReagentSetDescription property of Screen.
  
  Specified by:
  
  setScreenReagentSetDescription in interface MetadataStore
  
  Parameters:
  
  reagentSetDescription - ReagentSetDescription to set.
  
  screenIndex - the Screen index.
- setScreenReagentSetIdentifier
  
  public void setScreenReagentSetIdentifier(java.lang.String reagentSetIdentifier, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ReagentSetIdentifier property of Screen.
  
  Specified by:
  
  setScreenReagentSetIdentifier in interface MetadataStore
  
  Parameters:
  
  reagentSetIdentifier - ReagentSetIdentifier to set.
  
  screenIndex - the Screen index.
- setScreenType
  
  public void setScreenType(java.lang.String type, int screenIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Screen.
  
  Specified by:
  
  setScreenType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  screenIndex - the Screen index.
- setStageLabelName
  
  public void setStageLabelName(java.lang.String name, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Name property of StageLabel.
  
  Specified by:
  
  setStageLabelName in interface MetadataStore
  
  Parameters:
  
  name - Name to set.
  
  imageIndex - the Image index.
- setStageLabelX
  
  public void setStageLabelX(Length x, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the X property of StageLabel.
  
  Specified by:
  
  setStageLabelX in interface MetadataStore
  
  Parameters:
  
  x - X to set.
  
  imageIndex - the Image index.
- setStageLabelY
  
  public void setStageLabelY(Length y, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Y property of StageLabel.
  
  Specified by:
  
  setStageLabelY in interface MetadataStore
  
  Parameters:
  
  y - Y to set.
  
  imageIndex - the Image index.
- setStageLabelZ
  
  public void setStageLabelZ(Length z, int imageIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Z property of StageLabel.
  
  Specified by:
  
  setStageLabelZ in interface MetadataStore
  
  Parameters:
  
  z - Z to set.
  
  imageIndex - the Image index.
- setTagAnnotationAnnotationRef
  
  public void setTagAnnotationAnnotationRef(java.lang.String annotation, int tagAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of TagAnnotation.
  
  Specified by:
  
  setTagAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  tagAnnotationIndex - the TagAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setTagAnnotationAnnotator
  
  public void setTagAnnotationAnnotator(java.lang.String annotator, int tagAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of TagAnnotation.
  
  Specified by:
  
  setTagAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  tagAnnotationIndex - the TagAnnotation index.
- setTagAnnotationDescription
  
  public void setTagAnnotationDescription(java.lang.String description, int tagAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of TagAnnotation.
  
  Specified by:
  
  setTagAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  tagAnnotationIndex - the TagAnnotation index.
- setTagAnnotationID
  
  public void setTagAnnotationID(java.lang.String id, int tagAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of TagAnnotation.
  
  Specified by:
  
  setTagAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  tagAnnotationIndex - the TagAnnotation index.
- setTagAnnotationNamespace
  
  public void setTagAnnotationNamespace(java.lang.String namespace, int tagAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of TagAnnotation.
  
  Specified by:
  
  setTagAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  tagAnnotationIndex - the TagAnnotation index.
- setTagAnnotationValue
  
  public void setTagAnnotationValue(java.lang.String value, int tagAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of TagAnnotation.
  
  Specified by:
  
  setTagAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  tagAnnotationIndex - the TagAnnotation index.
- setTermAnnotationAnnotationRef
  
  public void setTermAnnotationAnnotationRef(java.lang.String annotation, int termAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of TermAnnotation.
  
  Specified by:
  
  setTermAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  termAnnotationIndex - the TermAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setTermAnnotationAnnotator
  
  public void setTermAnnotationAnnotator(java.lang.String annotator, int termAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of TermAnnotation.
  
  Specified by:
  
  setTermAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  termAnnotationIndex - the TermAnnotation index.
- setTermAnnotationDescription
  
  public void setTermAnnotationDescription(java.lang.String description, int termAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of TermAnnotation.
  
  Specified by:
  
  setTermAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  termAnnotationIndex - the TermAnnotation index.
- setTermAnnotationID
  
  public void setTermAnnotationID(java.lang.String id, int termAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of TermAnnotation.
  
  Specified by:
  
  setTermAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  termAnnotationIndex - the TermAnnotation index.
- setTermAnnotationNamespace
  
  public void setTermAnnotationNamespace(java.lang.String namespace, int termAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of TermAnnotation.
  
  Specified by:
  
  setTermAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  termAnnotationIndex - the TermAnnotation index.
- setTermAnnotationValue
  
  public void setTermAnnotationValue(java.lang.String value, int termAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of TermAnnotation.
  
  Specified by:
  
  setTermAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  termAnnotationIndex - the TermAnnotation index.
- setTiffDataFirstC
  
  public void setTiffDataFirstC(NonNegativeInteger firstC, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FirstC property of TiffData.
  
  Specified by:
  
  setTiffDataFirstC in interface MetadataStore
  
  Parameters:
  
  firstC - FirstC to set.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- setTiffDataFirstT
  
  public void setTiffDataFirstT(NonNegativeInteger firstT, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FirstT property of TiffData.
  
  Specified by:
  
  setTiffDataFirstT in interface MetadataStore
  
  Parameters:
  
  firstT - FirstT to set.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- setTiffDataFirstZ
  
  public void setTiffDataFirstZ(NonNegativeInteger firstZ, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FirstZ property of TiffData.
  
  Specified by:
  
  setTiffDataFirstZ in interface MetadataStore
  
  Parameters:
  
  firstZ - FirstZ to set.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- setTiffDataIFD
  
  public void setTiffDataIFD(NonNegativeInteger ifd, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the IFD property of TiffData.
  
  Specified by:
  
  setTiffDataIFD in interface MetadataStore
  
  Parameters:
  
  ifd - IFD to set.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- setTiffDataPlaneCount
  
  public void setTiffDataPlaneCount(NonNegativeInteger planeCount, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PlaneCount property of TiffData.
  
  Specified by:
  
  setTiffDataPlaneCount in interface MetadataStore
  
  Parameters:
  
  planeCount - PlaneCount to set.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- setTimestampAnnotationAnnotationRef
  
  public void setTimestampAnnotationAnnotationRef(java.lang.String annotation, int timestampAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of TimestampAnnotation.
  
  Specified by:
  
  setTimestampAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  timestampAnnotationIndex - the TimestampAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setTimestampAnnotationAnnotator
  
  public void setTimestampAnnotationAnnotator(java.lang.String annotator, int timestampAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of TimestampAnnotation.
  
  Specified by:
  
  setTimestampAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  timestampAnnotationIndex - the TimestampAnnotation index.
- setTimestampAnnotationDescription
  
  public void setTimestampAnnotationDescription(java.lang.String description, int timestampAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of TimestampAnnotation.
  
  Specified by:
  
  setTimestampAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  timestampAnnotationIndex - the TimestampAnnotation index.
- setTimestampAnnotationID
  
  public void setTimestampAnnotationID(java.lang.String id, int timestampAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of TimestampAnnotation.
  
  Specified by:
  
  setTimestampAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  timestampAnnotationIndex - the TimestampAnnotation index.
- setTimestampAnnotationNamespace
  
  public void setTimestampAnnotationNamespace(java.lang.String namespace, int timestampAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of TimestampAnnotation.
  
  Specified by:
  
  setTimestampAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  timestampAnnotationIndex - the TimestampAnnotation index.
- setTimestampAnnotationValue
  
  public void setTimestampAnnotationValue(Timestamp value, int timestampAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of TimestampAnnotation.
  
  Specified by:
  
  setTimestampAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  timestampAnnotationIndex - the TimestampAnnotation index.
- setTransmittanceRangeCutIn
  
  public void setTransmittanceRangeCutIn(Length cutIn, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CutIn property of TransmittanceRange.
  
  Specified by:
  
  setTransmittanceRangeCutIn in interface MetadataStore
  
  Parameters:
  
  cutIn - CutIn to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setTransmittanceRangeCutInTolerance
  
  public void setTransmittanceRangeCutInTolerance(Length cutInTolerance, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CutInTolerance property of TransmittanceRange.
  
  Specified by:
  
  setTransmittanceRangeCutInTolerance in interface MetadataStore
  
  Parameters:
  
  cutInTolerance - CutInTolerance to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setTransmittanceRangeCutOut
  
  public void setTransmittanceRangeCutOut(Length cutOut, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CutOut property of TransmittanceRange.
  
  Specified by:
  
  setTransmittanceRangeCutOut in interface MetadataStore
  
  Parameters:
  
  cutOut - CutOut to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setTransmittanceRangeCutOutTolerance
  
  public void setTransmittanceRangeCutOutTolerance(Length cutOutTolerance, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the CutOutTolerance property of TransmittanceRange.
  
  Specified by:
  
  setTransmittanceRangeCutOutTolerance in interface MetadataStore
  
  Parameters:
  
  cutOutTolerance - CutOutTolerance to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setTransmittanceRangeTransmittance
  
  public void setTransmittanceRangeTransmittance(PercentFraction transmittance, int instrumentIndex, int filterIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Transmittance property of TransmittanceRange.
  
  Specified by:
  
  setTransmittanceRangeTransmittance in interface MetadataStore
  
  Parameters:
  
  transmittance - Transmittance to set.
  
  instrumentIndex - the Instrument index.
  
  filterIndex - the Filter index.
- setUUIDFileName
  
  public void setUUIDFileName(java.lang.String fileName, int imageIndex, int tiffDataIndex)
  
  Description copied from interface: MetadataStore
  
  Set the FileName property of UUID.
  
  Specified by:
  
  setUUIDFileName in interface MetadataStore
  
  Parameters:
  
  fileName - FileName to set.
  
  imageIndex - the Image index.
  
  tiffDataIndex - the TiffData index.
- setWellAnnotationRef
  
  public void setWellAnnotationRef(java.lang.String annotation, int plateIndex, int wellIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of Well.
  
  Specified by:
  
  setWellAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setWellColor
  
  public void setWellColor(Color color, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Color property of Well.
  
  Specified by:
  
  setWellColor in interface MetadataStore
  
  Parameters:
  
  color - Color to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellColumn
  
  public void setWellColumn(NonNegativeInteger column, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Column property of Well.
  
  Specified by:
  
  setWellColumn in interface MetadataStore
  
  Parameters:
  
  column - Column to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellExternalDescription
  
  public void setWellExternalDescription(java.lang.String externalDescription, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExternalDescription property of Well.
  
  Specified by:
  
  setWellExternalDescription in interface MetadataStore
  
  Parameters:
  
  externalDescription - ExternalDescription to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellExternalIdentifier
  
  public void setWellExternalIdentifier(java.lang.String externalIdentifier, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ExternalIdentifier property of Well.
  
  Specified by:
  
  setWellExternalIdentifier in interface MetadataStore
  
  Parameters:
  
  externalIdentifier - ExternalIdentifier to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellID
  
  public void setWellID(java.lang.String id, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of Well.
  
  Specified by:
  
  setWellID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellReagentRef
  
  public void setWellReagentRef(java.lang.String reagent, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ReagentRef property of Well.
  
  Specified by:
  
  setWellReagentRef in interface MetadataStore
  
  Parameters:
  
  reagent - ReagentRef to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellRow
  
  public void setWellRow(NonNegativeInteger row, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Row property of Well.
  
  Specified by:
  
  setWellRow in interface MetadataStore
  
  Parameters:
  
  row - Row to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellType
  
  public void setWellType(java.lang.String type, int plateIndex, int wellIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Type property of Well.
  
  Specified by:
  
  setWellType in interface MetadataStore
  
  Parameters:
  
  type - Type to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
- setWellSampleID
  
  public void setWellSampleID(java.lang.String id, int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of WellSample.
  
  Specified by:
  
  setWellSampleID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
- setWellSampleImageRef
  
  public void setWellSampleImageRef(java.lang.String image, int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ImageRef property of WellSample.
  
  Specified by:
  
  setWellSampleImageRef in interface MetadataStore
  
  Parameters:
  
  image - ImageRef to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
- setWellSampleIndex
  
  public void setWellSampleIndex(NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Index property of WellSample.
  
  Specified by:
  
  setWellSampleIndex in interface MetadataStore
  
  Parameters:
  
  index - Index to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
- setWellSamplePositionX
  
  public void setWellSamplePositionX(Length positionX, int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PositionX property of WellSample.
  
  Specified by:
  
  setWellSamplePositionX in interface MetadataStore
  
  Parameters:
  
  positionX - PositionX to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
- setWellSamplePositionY
  
  public void setWellSamplePositionY(Length positionY, int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataStore
  
  Set the PositionY property of WellSample.
  
  Specified by:
  
  setWellSamplePositionY in interface MetadataStore
  
  Parameters:
  
  positionY - PositionY to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
- setWellSampleTimepoint
  
  public void setWellSampleTimepoint(Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Timepoint property of WellSample.
  
  Specified by:
  
  setWellSampleTimepoint in interface MetadataStore
  
  Parameters:
  
  timepoint - Timepoint to set.
  
  plateIndex - the Plate index.
  
  wellIndex - the Well index.
  
  wellSampleIndex - the WellSample index.
- setXMLAnnotationAnnotationRef
  
  public void setXMLAnnotationAnnotationRef(java.lang.String annotation, int XMLAnnotationIndex, int annotationRefIndex)
  
  Description copied from interface: MetadataStore
  
  Set the AnnotationRef property of XMLAnnotation.
  
  Specified by:
  
  setXMLAnnotationAnnotationRef in interface MetadataStore
  
  Parameters:
  
  annotation - AnnotationRef to set.
  
  XMLAnnotationIndex - the XMLAnnotation index.
  
  annotationRefIndex - AnnotationRef index (unused).
- setXMLAnnotationAnnotator
  
  public void setXMLAnnotationAnnotator(java.lang.String annotator, int XMLAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Annotator property of XMLAnnotation.
  
  Specified by:
  
  setXMLAnnotationAnnotator in interface MetadataStore
  
  Parameters:
  
  annotator - Annotator to set.
  
  XMLAnnotationIndex - the XMLAnnotation index.
- setXMLAnnotationDescription
  
  public void setXMLAnnotationDescription(java.lang.String description, int XMLAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Description property of XMLAnnotation.
  
  Specified by:
  
  setXMLAnnotationDescription in interface MetadataStore
  
  Parameters:
  
  description - Description to set.
  
  XMLAnnotationIndex - the XMLAnnotation index.
- setXMLAnnotationID
  
  public void setXMLAnnotationID(java.lang.String id, int XMLAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the ID property of XMLAnnotation.
  
  Specified by:
  
  setXMLAnnotationID in interface MetadataStore
  
  Parameters:
  
  id - ID to set.
  
  XMLAnnotationIndex - the XMLAnnotation index.
- setXMLAnnotationNamespace
  
  public void setXMLAnnotationNamespace(java.lang.String namespace, int XMLAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Namespace property of XMLAnnotation.
  
  Specified by:
  
  setXMLAnnotationNamespace in interface MetadataStore
  
  Parameters:
  
  namespace - Namespace to set.
  
  XMLAnnotationIndex - the XMLAnnotation index.
- setXMLAnnotationValue
  
  public void setXMLAnnotationValue(java.lang.String value, int XMLAnnotationIndex)
  
  Description copied from interface: MetadataStore
  
  Set the Value property of XMLAnnotation.
  
  Specified by:
  
  setXMLAnnotationValue in interface MetadataStore
  
  Parameters:
  
  value - Value to set.
  
  XMLAnnotationIndex - the XMLAnnotation index.

Class AggregateMetadata

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Details

Method Details