Package ome.xml.meta
Class OMEXMLMetadataImpl
java.lang.Object
ome.xml.meta.AbstractOMEXMLMetadata
ome.xml.meta.OMEXMLMetadataImpl
- All Implemented Interfaces:
BaseMetadata
,IMetadata
,MetadataRetrieve
,MetadataStore
,OMEXMLMetadata
public class OMEXMLMetadataImpl extends AbstractOMEXMLMetadata
A metadata store implementation for constructing and manipulating OME-XML
DOMs for the current version of OME-XML.
- Author:
- Curtis Rueden ctrueden at wisc.edu, Melissa Linkert linkert at wisc.edu
-
Field Summary
-
Constructor Summary
Constructors Constructor Description OMEXMLMetadataImpl()
-
Method Summary
Modifier and Type Method Description void
createRoot()
Create root node.java.lang.String
dumpXML()
Dumps the given OME-XML DOM tree to a string.java.lang.String
getArcAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Get the AnnotationRef property of Arc.java.lang.String
getArcID(int instrumentIndex, int lightSourceIndex)
Get the ID property of Arc.java.lang.String
getArcLotNumber(int instrumentIndex, int lightSourceIndex)
Get the LotNumber property of Arc.java.lang.String
getArcManufacturer(int instrumentIndex, int lightSourceIndex)
Get the Manufacturer property of Arc.java.lang.String
getArcModel(int instrumentIndex, int lightSourceIndex)
Get the Model property of Arc.Power
getArcPower(int instrumentIndex, int lightSourceIndex)
Get the Power property of Arc.java.lang.String
getArcSerialNumber(int instrumentIndex, int lightSourceIndex)
Get the SerialNumber property of Arc.ArcType
getArcType(int instrumentIndex, int lightSourceIndex)
Get the Type property of Arc.byte[]
getBinaryFileBinData(int fileAnnotationIndex)
Get the Base64Binary property of BinData.java.lang.Boolean
getBinaryFileBinDataBigEndian(int fileAnnotationIndex)
Get the BigEndian property of BinData.Compression
getBinaryFileBinDataCompression(int fileAnnotationIndex)
Get the Compression property of BinData.NonNegativeLong
getBinaryFileBinDataLength(int fileAnnotationIndex)
Get the Length property of BinData.java.lang.String
getBinaryFileFileName(int fileAnnotationIndex)
Get the FileName property of BinaryFile.java.lang.String
getBinaryFileMIMEType(int fileAnnotationIndex)
Get the MIMEType property of BinaryFile.NonNegativeLong
getBinaryFileSize(int fileAnnotationIndex)
Get the Size property of BinaryFile.java.lang.String
getBinaryOnlyMetadataFile()
Get the MetadataFile property of BinaryOnly.java.lang.String
getBinaryOnlyUUID()
Get the UUID property of BinaryOnly.int
getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)
Get the number of links to a BooleanAnnotation.java.lang.String
getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of BooleanAnnotation.java.lang.String
getBooleanAnnotationAnnotator(int booleanAnnotationIndex)
Get the Annotator property of BooleanAnnotation.int
getBooleanAnnotationCount()
Get the number of BooleanAnnotation elements.java.lang.String
getBooleanAnnotationDescription(int booleanAnnotationIndex)
Get the Description property of BooleanAnnotation.java.lang.String
getBooleanAnnotationID(int booleanAnnotationIndex)
Get the ID property of BooleanAnnotation.java.lang.String
getBooleanAnnotationNamespace(int booleanAnnotationIndex)
Get the Namespace property of BooleanAnnotation.java.lang.Boolean
getBooleanAnnotationValue(int booleanAnnotationIndex)
Get the Value property of BooleanAnnotation.AcquisitionMode
getChannelAcquisitionMode(int imageIndex, int channelIndex)
Get the AcquisitionMode property of Channel.java.lang.String
getChannelAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)
Get the AnnotationRef property of Channel.int
getChannelAnnotationRefCount(int imageIndex, int channelIndex)
Get the number of AnnotationRef elements in Channel.Color
getChannelColor(int imageIndex, int channelIndex)
Get the Color property of Channel.ContrastMethod
getChannelContrastMethod(int imageIndex, int channelIndex)
Get the ContrastMethod property of Channel.int
getChannelCount(int imageIndex)
Get the number of Channel elements.Length
getChannelEmissionWavelength(int imageIndex, int channelIndex)
Get the EmissionWavelength property of Channel.Length
getChannelExcitationWavelength(int imageIndex, int channelIndex)
Get the ExcitationWavelength property of Channel.java.lang.String
getChannelFilterSetRef(int imageIndex, int channelIndex)
Get the FilterSetRef property of Channel.java.lang.String
getChannelFluor(int imageIndex, int channelIndex)
Get the Fluor property of Channel.java.lang.String
getChannelID(int imageIndex, int channelIndex)
Get the ID property of Channel.IlluminationType
getChannelIlluminationType(int imageIndex, int channelIndex)
Get the IlluminationType property of Channel.PercentFraction
getChannelLightSourceSettingsAttenuation(int imageIndex, int channelIndex)
Get the Attenuation property of LightSourceSettings.java.lang.String
getChannelLightSourceSettingsID(int imageIndex, int channelIndex)
Get the ID property of LightSourceSettings.Length
getChannelLightSourceSettingsWavelength(int imageIndex, int channelIndex)
Get the Wavelength property of LightSourceSettings.java.lang.String
getChannelName(int imageIndex, int channelIndex)
Get the Name property of Channel.java.lang.Double
getChannelNDFilter(int imageIndex, int channelIndex)
Get the NDFilter property of Channel.Length
getChannelPinholeSize(int imageIndex, int channelIndex)
Get the PinholeSize property of Channel.java.lang.Integer
getChannelPockelCellSetting(int imageIndex, int channelIndex)
Get the PockelCellSetting property of Channel.PositiveInteger
getChannelSamplesPerPixel(int imageIndex, int channelIndex)
Get the SamplesPerPixel property of Channel.int
getCommentAnnotationAnnotationCount(int commentAnnotationIndex)
Get the number of links to a CommentAnnotation.java.lang.String
getCommentAnnotationAnnotationRef(int commentAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of CommentAnnotation.java.lang.String
getCommentAnnotationAnnotator(int commentAnnotationIndex)
Get the Annotator property of CommentAnnotation.int
getCommentAnnotationCount()
Get the number of CommentAnnotation elements.java.lang.String
getCommentAnnotationDescription(int commentAnnotationIndex)
Get the Description property of CommentAnnotation.java.lang.String
getCommentAnnotationID(int commentAnnotationIndex)
Get the ID property of CommentAnnotation.java.lang.String
getCommentAnnotationNamespace(int commentAnnotationIndex)
Get the Namespace property of CommentAnnotation.java.lang.String
getCommentAnnotationValue(int commentAnnotationIndex)
Get the Value property of CommentAnnotation.java.lang.String
getCreator()
Gets the Creator associated with this collection of metadata.java.lang.String
getDatasetAnnotationRef(int datasetIndex, int annotationRefIndex)
Get the AnnotationRef property of Dataset.int
getDatasetAnnotationRefCount(int datasetIndex)
Get the number of AnnotationRef elements in Dataset.int
getDatasetCount()
Get the number of Dataset elements.java.lang.String
getDatasetDescription(int datasetIndex)
Get the Description property of Dataset.java.lang.String
getDatasetExperimenterGroupRef(int datasetIndex)
Get the ExperimenterGroupRef property of Dataset.java.lang.String
getDatasetExperimenterRef(int datasetIndex)
Get the ExperimenterRef property of Dataset.java.lang.String
getDatasetID(int datasetIndex)
Get the ID property of Dataset.java.lang.String
getDatasetImageRef(int datasetIndex, int imageRefIndex)
Get the ImageRef property of Dataset.int
getDatasetImageRefCount(int datasetIndex)
Get the number of ImageRef elements in Dataset.java.lang.String
getDatasetName(int datasetIndex)
Get the Name property of Dataset.int
getDatasetRefCount(int projectIndex)
Get the number of DatasetRef elements.java.lang.Double
getDetectorAmplificationGain(int instrumentIndex, int detectorIndex)
Get the AmplificationGain property of Detector.java.lang.String
getDetectorAnnotationRef(int instrumentIndex, int detectorIndex, int annotationRefIndex)
Get the AnnotationRef property of Detector.int
getDetectorAnnotationRefCount(int instrumentIndex, int detectorIndex)
Get the number of AnnotationRef elements in Detector.int
getDetectorCount(int instrumentIndex)
Get the number of Detector elements.java.lang.Double
getDetectorGain(int instrumentIndex, int detectorIndex)
Get the Gain property of Detector.java.lang.String
getDetectorID(int instrumentIndex, int detectorIndex)
Get the ID property of Detector.java.lang.String
getDetectorLotNumber(int instrumentIndex, int detectorIndex)
Get the LotNumber property of Detector.java.lang.String
getDetectorManufacturer(int instrumentIndex, int detectorIndex)
Get the Manufacturer property of Detector.java.lang.String
getDetectorModel(int instrumentIndex, int detectorIndex)
Get the Model property of Detector.java.lang.Double
getDetectorOffset(int instrumentIndex, int detectorIndex)
Get the Offset property of Detector.java.lang.String
getDetectorSerialNumber(int instrumentIndex, int detectorIndex)
Get the SerialNumber property of Detector.Binning
getDetectorSettingsBinning(int imageIndex, int channelIndex)
Get the Binning property of DetectorSettings.java.lang.Double
getDetectorSettingsGain(int imageIndex, int channelIndex)
Get the Gain property of DetectorSettings.java.lang.String
getDetectorSettingsID(int imageIndex, int channelIndex)
Get the ID property of DetectorSettings.PositiveInteger
getDetectorSettingsIntegration(int imageIndex, int channelIndex)
Get the Integration property of DetectorSettings.java.lang.Double
getDetectorSettingsOffset(int imageIndex, int channelIndex)
Get the Offset property of DetectorSettings.Frequency
getDetectorSettingsReadOutRate(int imageIndex, int channelIndex)
Get the ReadOutRate property of DetectorSettings.ElectricPotential
getDetectorSettingsVoltage(int imageIndex, int channelIndex)
Get the Voltage property of DetectorSettings.java.lang.Double
getDetectorSettingsZoom(int imageIndex, int channelIndex)
Get the Zoom property of DetectorSettings.DetectorType
getDetectorType(int instrumentIndex, int detectorIndex)
Get the Type property of Detector.ElectricPotential
getDetectorVoltage(int instrumentIndex, int detectorIndex)
Get the Voltage property of Detector.java.lang.Double
getDetectorZoom(int instrumentIndex, int detectorIndex)
Get the Zoom property of Detector.java.lang.String
getDichroicAnnotationRef(int instrumentIndex, int dichroicIndex, int annotationRefIndex)
Get the AnnotationRef property of Dichroic.int
getDichroicAnnotationRefCount(int instrumentIndex, int dichroicIndex)
Get the number of AnnotationRef elements in Dichroic.int
getDichroicCount(int instrumentIndex)
Get the number of Dichroic elements.java.lang.String
getDichroicID(int instrumentIndex, int dichroicIndex)
Get the ID property of Dichroic.java.lang.String
getDichroicLotNumber(int instrumentIndex, int dichroicIndex)
Get the LotNumber property of Dichroic.java.lang.String
getDichroicManufacturer(int instrumentIndex, int dichroicIndex)
Get the Manufacturer property of Dichroic.java.lang.String
getDichroicModel(int instrumentIndex, int dichroicIndex)
Get the Model property of Dichroic.java.lang.String
getDichroicSerialNumber(int instrumentIndex, int dichroicIndex)
Get the SerialNumber property of Dichroic.int
getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)
Get the number of links to a DoubleAnnotation.java.lang.String
getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of DoubleAnnotation.java.lang.String
getDoubleAnnotationAnnotator(int doubleAnnotationIndex)
Get the Annotator property of DoubleAnnotation.int
getDoubleAnnotationCount()
Get the number of DoubleAnnotation elements.java.lang.String
getDoubleAnnotationDescription(int doubleAnnotationIndex)
Get the Description property of DoubleAnnotation.java.lang.String
getDoubleAnnotationID(int doubleAnnotationIndex)
Get the ID property of DoubleAnnotation.java.lang.String
getDoubleAnnotationNamespace(int doubleAnnotationIndex)
Get the Namespace property of DoubleAnnotation.java.lang.Double
getDoubleAnnotationValue(int doubleAnnotationIndex)
Get the Value property of DoubleAnnotation.java.lang.String
getEllipseAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Ellipse.Color
getEllipseFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Ellipse.FillRule
getEllipseFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Ellipse.FontFamily
getEllipseFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Ellipse.Length
getEllipseFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Ellipse.FontStyle
getEllipseFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Ellipse.java.lang.String
getEllipseID(int ROIIndex, int shapeIndex)
Get the ID property of Ellipse.java.lang.Boolean
getEllipseLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Ellipse.java.lang.Double
getEllipseRadiusX(int ROIIndex, int shapeIndex)
Get the RadiusX property of Ellipse.java.lang.Double
getEllipseRadiusY(int ROIIndex, int shapeIndex)
Get the RadiusY property of Ellipse.Color
getEllipseStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Ellipse.java.lang.String
getEllipseStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Ellipse.Length
getEllipseStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Ellipse.java.lang.String
getEllipseText(int ROIIndex, int shapeIndex)
Get the Text property of Ellipse.NonNegativeInteger
getEllipseTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Ellipse.NonNegativeInteger
getEllipseTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Ellipse.NonNegativeInteger
getEllipseTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Ellipse.AffineTransform
getEllipseTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Ellipse.java.lang.Double
getEllipseX(int ROIIndex, int shapeIndex)
Get the X property of Ellipse.java.lang.Double
getEllipseY(int ROIIndex, int shapeIndex)
Get the Y property of Ellipse.int
getExperimentCount()
Get the number of Experiment elements.java.lang.String
getExperimentDescription(int experimentIndex)
Get the Description property of Experiment.java.lang.String
getExperimenterAnnotationRef(int experimenterIndex, int annotationRefIndex)
Get the AnnotationRef property of Experimenter.int
getExperimenterAnnotationRefCount(int experimenterIndex)
Get the number of AnnotationRef elements in Experimenter.int
getExperimenterCount()
Get the number of Experimenter elements.java.lang.String
getExperimenterEmail(int experimenterIndex)
Get the Email property of Experimenter.java.lang.String
getExperimenterFirstName(int experimenterIndex)
Get the FirstName property of Experimenter.java.lang.String
getExperimenterGroupAnnotationRef(int experimenterGroupIndex, int annotationRefIndex)
Get the AnnotationRef property of ExperimenterGroup.int
getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)
Get the number of AnnotationRef elements in ExperimenterGroup.int
getExperimenterGroupCount()
Get the number of ExperimenterGroup elements.java.lang.String
getExperimenterGroupDescription(int experimenterGroupIndex)
Get the Description property of ExperimenterGroup.java.lang.String
getExperimenterGroupExperimenterRef(int experimenterGroupIndex, int experimenterRefIndex)
Get the ExperimenterRef property of ExperimenterGroup.int
getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)
Get the number of ExperimenterRef elements in ExperimenterGroup.java.lang.String
getExperimenterGroupID(int experimenterGroupIndex)
Get the ID property of ExperimenterGroup.java.lang.String
getExperimenterGroupLeader(int experimenterGroupIndex, int leaderIndex)
Get the Leader property of ExperimenterGroup.java.lang.String
getExperimenterGroupName(int experimenterGroupIndex)
Get the Name property of ExperimenterGroup.java.lang.String
getExperimenterID(int experimenterIndex)
Get the ID property of Experimenter.java.lang.String
getExperimenterInstitution(int experimenterIndex)
Get the Institution property of Experimenter.java.lang.String
getExperimenterLastName(int experimenterIndex)
Get the LastName property of Experimenter.java.lang.String
getExperimenterMiddleName(int experimenterIndex)
Get the MiddleName property of Experimenter.java.lang.String
getExperimenterUserName(int experimenterIndex)
Get the UserName property of Experimenter.java.lang.String
getExperimentExperimenterRef(int experimentIndex)
Get the ExperimenterRef property of Experiment.java.lang.String
getExperimentID(int experimentIndex)
Get the ID property of Experiment.ExperimentType
getExperimentType(int experimentIndex)
Get the Type property of Experiment.java.lang.String
getFilamentAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Get the AnnotationRef property of Filament.java.lang.String
getFilamentID(int instrumentIndex, int lightSourceIndex)
Get the ID property of Filament.java.lang.String
getFilamentLotNumber(int instrumentIndex, int lightSourceIndex)
Get the LotNumber property of Filament.java.lang.String
getFilamentManufacturer(int instrumentIndex, int lightSourceIndex)
Get the Manufacturer property of Filament.java.lang.String
getFilamentModel(int instrumentIndex, int lightSourceIndex)
Get the Model property of Filament.Power
getFilamentPower(int instrumentIndex, int lightSourceIndex)
Get the Power property of Filament.java.lang.String
getFilamentSerialNumber(int instrumentIndex, int lightSourceIndex)
Get the SerialNumber property of Filament.FilamentType
getFilamentType(int instrumentIndex, int lightSourceIndex)
Get the Type property of Filament.int
getFileAnnotationAnnotationCount(int fileAnnotationIndex)
Get the number of links to a FileAnnotation.java.lang.String
getFileAnnotationAnnotationRef(int fileAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of FileAnnotation.java.lang.String
getFileAnnotationAnnotator(int fileAnnotationIndex)
Get the Annotator property of FileAnnotation.int
getFileAnnotationCount()
Get the number of FileAnnotation elements.java.lang.String
getFileAnnotationDescription(int fileAnnotationIndex)
Get the Description property of FileAnnotation.java.lang.String
getFileAnnotationID(int fileAnnotationIndex)
Get the ID property of FileAnnotation.java.lang.String
getFileAnnotationNamespace(int fileAnnotationIndex)
Get the Namespace property of FileAnnotation.java.lang.String
getFilterAnnotationRef(int instrumentIndex, int filterIndex, int annotationRefIndex)
Get the AnnotationRef property of Filter.int
getFilterAnnotationRefCount(int instrumentIndex, int filterIndex)
Get the number of AnnotationRef elements in Filter.int
getFilterCount(int instrumentIndex)
Get the number of Filter elements.java.lang.String
getFilterFilterWheel(int instrumentIndex, int filterIndex)
Get the FilterWheel property of Filter.java.lang.String
getFilterID(int instrumentIndex, int filterIndex)
Get the ID property of Filter.java.lang.String
getFilterLotNumber(int instrumentIndex, int filterIndex)
Get the LotNumber property of Filter.java.lang.String
getFilterManufacturer(int instrumentIndex, int filterIndex)
Get the Manufacturer property of Filter.java.lang.String
getFilterModel(int instrumentIndex, int filterIndex)
Get the Model property of Filter.java.lang.String
getFilterSerialNumber(int instrumentIndex, int filterIndex)
Get the SerialNumber property of Filter.int
getFilterSetCount(int instrumentIndex)
Get the number of FilterSet elements.java.lang.String
getFilterSetDichroicRef(int instrumentIndex, int filterSetIndex)
Get the DichroicRef property of FilterSet.java.lang.String
getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)
Get the EmissionFilterRef property of FilterSet.int
getFilterSetEmissionFilterRefCount(int instrumentIndex, int filterSetIndex)
Get the number of EmissionFilterRef elements in FilterSet.java.lang.String
getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)
Get the ExcitationFilterRef property of FilterSet.int
getFilterSetExcitationFilterRefCount(int instrumentIndex, int filterSetIndex)
Get the number of ExcitationFilterRef elements in FilterSet.java.lang.String
getFilterSetID(int instrumentIndex, int filterSetIndex)
Get the ID property of FilterSet.java.lang.String
getFilterSetLotNumber(int instrumentIndex, int filterSetIndex)
Get the LotNumber property of FilterSet.java.lang.String
getFilterSetManufacturer(int instrumentIndex, int filterSetIndex)
Get the Manufacturer property of FilterSet.java.lang.String
getFilterSetModel(int instrumentIndex, int filterSetIndex)
Get the Model property of FilterSet.java.lang.String
getFilterSetSerialNumber(int instrumentIndex, int filterSetIndex)
Get the SerialNumber property of FilterSet.FilterType
getFilterType(int instrumentIndex, int filterIndex)
Get the Type property of Filter.java.lang.String
getFolderAnnotationRef(int folderIndex, int annotationRefIndex)
Get the AnnotationRef property of Folder.int
getFolderAnnotationRefCount(int folderIndex)
Get the number of AnnotationRef elements in Folder.int
getFolderCount()
Get the number of Folder elements.java.lang.String
getFolderDescription(int folderIndex)
Get the Description property of Folder.java.lang.String
getFolderFolderRef(int folderIndex, int folderRefIndex)
Get the FolderRef property of Folder.java.lang.String
getFolderID(int folderIndex)
Get the ID property of Folder.java.lang.String
getFolderImageRef(int folderIndex, int imageRefIndex)
Get the ImageRef property of Folder.int
getFolderImageRefCount(int folderIndex)
Get the number of ImageRef elements in Folder.java.lang.String
getFolderName(int folderIndex)
Get the Name property of Folder.int
getFolderRefCount(int folderIndex)
Get the number of FolderRef elements.java.lang.String
getFolderROIRef(int folderIndex, int ROIRefIndex)
Get the ROIRef property of Folder.int
getFolderROIRefCount(int folderIndex)
Get the number of ROIRef elements in Folder.java.lang.String
getGenericExcitationSourceAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Get the AnnotationRef property of GenericExcitationSource.java.lang.String
getGenericExcitationSourceID(int instrumentIndex, int lightSourceIndex)
Get the ID property of GenericExcitationSource.java.lang.String
getGenericExcitationSourceLotNumber(int instrumentIndex, int lightSourceIndex)
Get the LotNumber property of GenericExcitationSource.java.lang.String
getGenericExcitationSourceManufacturer(int instrumentIndex, int lightSourceIndex)
Get the Manufacturer property of GenericExcitationSource.java.util.List<MapPair>
getGenericExcitationSourceMap(int instrumentIndex, int lightSourceIndex)
Gets the Map value associated with this generic light sourcejava.lang.String
getGenericExcitationSourceModel(int instrumentIndex, int lightSourceIndex)
Get the Model property of GenericExcitationSource.Power
getGenericExcitationSourcePower(int instrumentIndex, int lightSourceIndex)
Get the Power property of GenericExcitationSource.java.lang.String
getGenericExcitationSourceSerialNumber(int instrumentIndex, int lightSourceIndex)
Get the SerialNumber property of GenericExcitationSource.Timestamp
getImageAcquisitionDate(int imageIndex)
Get the AcquisitionDate property of Image.java.lang.String
getImageAnnotationRef(int imageIndex, int annotationRefIndex)
Get the AnnotationRef property of Image.int
getImageAnnotationRefCount(int imageIndex)
Get the number of AnnotationRef elements in Image.int
getImageCount()
Get the number of Image elements.java.lang.String
getImageDescription(int imageIndex)
Get the Description property of Image.java.lang.String
getImageExperimenterGroupRef(int imageIndex)
Get the ExperimenterGroupRef property of Image.java.lang.String
getImageExperimenterRef(int imageIndex)
Get the ExperimenterRef property of Image.java.lang.String
getImageExperimentRef(int imageIndex)
Get the ExperimentRef property of Image.java.lang.String
getImageID(int imageIndex)
Get the ID property of Image.java.lang.String
getImageInstrumentRef(int imageIndex)
Get the InstrumentRef property of Image.java.lang.String
getImageMicrobeamManipulationRef(int imageIndex, int microbeamManipulationRefIndex)
Get the MicrobeamManipulationRef property of Image.java.lang.String
getImageName(int imageIndex)
Get the Name property of Image.java.lang.String
getImageROIRef(int imageIndex, int ROIRefIndex)
Get the ROIRef property of Image.int
getImageROIRefCount(int imageIndex)
Get the number of ROIRef elements in Image.Pressure
getImagingEnvironmentAirPressure(int imageIndex)
Get the AirPressure property of ImagingEnvironment.PercentFraction
getImagingEnvironmentCO2Percent(int imageIndex)
Get the CO2Percent property of ImagingEnvironment.PercentFraction
getImagingEnvironmentHumidity(int imageIndex)
Get the Humidity property of ImagingEnvironment.java.util.List<MapPair>
getImagingEnvironmentMap(int imageIndex)
Gets the Map value associated with this imaging environmentTemperature
getImagingEnvironmentTemperature(int imageIndex)
Get the Temperature property of ImagingEnvironment.java.lang.String
getInstrumentAnnotationRef(int instrumentIndex, int annotationRefIndex)
Get the AnnotationRef property of Instrument.int
getInstrumentAnnotationRefCount(int instrumentIndex)
Get the number of AnnotationRef elements in Instrument.int
getInstrumentCount()
Get the number of Instrument elements.java.lang.String
getInstrumentID(int instrumentIndex)
Get the ID property of Instrument.java.lang.String
getLabelAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Label.Color
getLabelFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Label.FillRule
getLabelFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Label.FontFamily
getLabelFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Label.Length
getLabelFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Label.FontStyle
getLabelFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Label.java.lang.String
getLabelID(int ROIIndex, int shapeIndex)
Get the ID property of Label.java.lang.Boolean
getLabelLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Label.Color
getLabelStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Label.java.lang.String
getLabelStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Label.Length
getLabelStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Label.java.lang.String
getLabelText(int ROIIndex, int shapeIndex)
Get the Text property of Label.NonNegativeInteger
getLabelTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Label.NonNegativeInteger
getLabelTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Label.NonNegativeInteger
getLabelTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Label.AffineTransform
getLabelTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Label.java.lang.Double
getLabelX(int ROIIndex, int shapeIndex)
Get the X property of Label.java.lang.Double
getLabelY(int ROIIndex, int shapeIndex)
Get the Y property of Label.java.lang.String
getLaserAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Get the AnnotationRef property of Laser.PositiveInteger
getLaserFrequencyMultiplication(int instrumentIndex, int lightSourceIndex)
Get the FrequencyMultiplication property of Laser.java.lang.String
getLaserID(int instrumentIndex, int lightSourceIndex)
Get the ID property of Laser.LaserMedium
getLaserLaserMedium(int instrumentIndex, int lightSourceIndex)
Get the LaserMedium property of Laser.java.lang.String
getLaserLotNumber(int instrumentIndex, int lightSourceIndex)
Get the LotNumber property of Laser.java.lang.String
getLaserManufacturer(int instrumentIndex, int lightSourceIndex)
Get the Manufacturer property of Laser.java.lang.String
getLaserModel(int instrumentIndex, int lightSourceIndex)
Get the Model property of Laser.java.lang.Boolean
getLaserPockelCell(int instrumentIndex, int lightSourceIndex)
Get the PockelCell property of Laser.Power
getLaserPower(int instrumentIndex, int lightSourceIndex)
Get the Power property of Laser.Pulse
getLaserPulse(int instrumentIndex, int lightSourceIndex)
Get the Pulse property of Laser.java.lang.String
getLaserPump(int instrumentIndex, int lightSourceIndex)
Get the Pump property of Laser.Frequency
getLaserRepetitionRate(int instrumentIndex, int lightSourceIndex)
Get the RepetitionRate property of Laser.java.lang.String
getLaserSerialNumber(int instrumentIndex, int lightSourceIndex)
Get the SerialNumber property of Laser.java.lang.Boolean
getLaserTuneable(int instrumentIndex, int lightSourceIndex)
Get the Tuneable property of Laser.LaserType
getLaserType(int instrumentIndex, int lightSourceIndex)
Get the Type property of Laser.Length
getLaserWavelength(int instrumentIndex, int lightSourceIndex)
Get the Wavelength property of Laser.int
getLeaderCount(int experimenterGroupIndex)
Get the number of Leader elements.java.lang.String
getLightEmittingDiodeAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Get the AnnotationRef property of LightEmittingDiode.java.lang.String
getLightEmittingDiodeID(int instrumentIndex, int lightSourceIndex)
Get the ID property of LightEmittingDiode.java.lang.String
getLightEmittingDiodeLotNumber(int instrumentIndex, int lightSourceIndex)
Get the LotNumber property of LightEmittingDiode.java.lang.String
getLightEmittingDiodeManufacturer(int instrumentIndex, int lightSourceIndex)
Get the Manufacturer property of LightEmittingDiode.java.lang.String
getLightEmittingDiodeModel(int instrumentIndex, int lightSourceIndex)
Get the Model property of LightEmittingDiode.Power
getLightEmittingDiodePower(int instrumentIndex, int lightSourceIndex)
Get the Power property of LightEmittingDiode.java.lang.String
getLightEmittingDiodeSerialNumber(int instrumentIndex, int lightSourceIndex)
Get the SerialNumber property of LightEmittingDiode.java.lang.String
getLightPathAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)
Get the AnnotationRef property of LightPath.int
getLightPathAnnotationRefCount(int imageIndex, int channelIndex)
Get the number of AnnotationRef elements in LightPath.java.lang.String
getLightPathDichroicRef(int imageIndex, int channelIndex)
Get the DichroicRef property of LightPath.java.lang.String
getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex)
Get the EmissionFilterRef property of LightPath.int
getLightPathEmissionFilterRefCount(int imageIndex, int channelIndex)
Get the number of EmissionFilterRef elements in LightPath.java.lang.String
getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex)
Get the ExcitationFilterRef property of LightPath.int
getLightPathExcitationFilterRefCount(int imageIndex, int channelIndex)
Get the number of ExcitationFilterRef elements in LightPath.int
getLightSourceAnnotationRefCount(int instrumentIndex, int lightSourceIndex)
Get the number of AnnotationRef elements in LightSource.int
getLightSourceCount(int instrumentIndex)
Get the number of LightSource elements.java.lang.String
getLightSourceType(int instrumentIndex, int lightSourceIndex)
Get the type of a LightSource.java.lang.String
getLineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Line.Color
getLineFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Line.FillRule
getLineFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Line.FontFamily
getLineFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Line.Length
getLineFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Line.FontStyle
getLineFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Line.java.lang.String
getLineID(int ROIIndex, int shapeIndex)
Get the ID property of Line.java.lang.Boolean
getLineLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Line.Marker
getLineMarkerEnd(int ROIIndex, int shapeIndex)
Get the MarkerEnd property of Line.Marker
getLineMarkerStart(int ROIIndex, int shapeIndex)
Get the MarkerStart property of Line.Color
getLineStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Line.java.lang.String
getLineStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Line.Length
getLineStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Line.java.lang.String
getLineText(int ROIIndex, int shapeIndex)
Get the Text property of Line.NonNegativeInteger
getLineTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Line.NonNegativeInteger
getLineTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Line.NonNegativeInteger
getLineTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Line.AffineTransform
getLineTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Line.java.lang.Double
getLineX1(int ROIIndex, int shapeIndex)
Get the X1 property of Line.java.lang.Double
getLineX2(int ROIIndex, int shapeIndex)
Get the X2 property of Line.java.lang.Double
getLineY1(int ROIIndex, int shapeIndex)
Get the Y1 property of Line.java.lang.Double
getLineY2(int ROIIndex, int shapeIndex)
Get the Y2 property of Line.int
getListAnnotationAnnotationCount(int listAnnotationIndex)
Get the number of links to a ListAnnotation.java.lang.String
getListAnnotationAnnotationRef(int listAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of ListAnnotation.java.lang.String
getListAnnotationAnnotator(int listAnnotationIndex)
Get the Annotator property of ListAnnotation.int
getListAnnotationCount()
Get the number of ListAnnotation elements.java.lang.String
getListAnnotationDescription(int listAnnotationIndex)
Get the Description property of ListAnnotation.java.lang.String
getListAnnotationID(int listAnnotationIndex)
Get the ID property of ListAnnotation.java.lang.String
getListAnnotationNamespace(int listAnnotationIndex)
Get the Namespace property of ListAnnotation.int
getLongAnnotationAnnotationCount(int longAnnotationIndex)
Get the number of links to a LongAnnotation.java.lang.String
getLongAnnotationAnnotationRef(int longAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of LongAnnotation.java.lang.String
getLongAnnotationAnnotator(int longAnnotationIndex)
Get the Annotator property of LongAnnotation.int
getLongAnnotationCount()
Get the number of LongAnnotation elements.java.lang.String
getLongAnnotationDescription(int longAnnotationIndex)
Get the Description property of LongAnnotation.java.lang.String
getLongAnnotationID(int longAnnotationIndex)
Get the ID property of LongAnnotation.java.lang.String
getLongAnnotationNamespace(int longAnnotationIndex)
Get the Namespace property of LongAnnotation.java.lang.Long
getLongAnnotationValue(int longAnnotationIndex)
Get the Value property of LongAnnotation.int
getMapAnnotationAnnotationCount(int mapAnnotationIndex)
Get the number of links to a MapAnnotation.java.lang.String
getMapAnnotationAnnotationRef(int mapAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of MapAnnotation.java.lang.String
getMapAnnotationAnnotator(int mapAnnotationIndex)
Get the Annotator property of MapAnnotation.int
getMapAnnotationCount()
Get the number of MapAnnotation elements.java.lang.String
getMapAnnotationDescription(int mapAnnotationIndex)
Get the Description property of MapAnnotation.java.lang.String
getMapAnnotationID(int mapAnnotationIndex)
Get the ID property of MapAnnotation.java.lang.String
getMapAnnotationNamespace(int mapAnnotationIndex)
Get the Namespace property of MapAnnotation.java.util.List<MapPair>
getMapAnnotationValue(int mapAnnotationIndex)
Gets the Map value associated with this annotationjava.lang.String
getMaskAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Mask.byte[]
getMaskBinData(int ROIIndex, int shapeIndex)
Get the Base64Binary property of BinData.java.lang.Boolean
getMaskBinDataBigEndian(int ROIIndex, int shapeIndex)
Get the BigEndian property of BinData.Compression
getMaskBinDataCompression(int ROIIndex, int shapeIndex)
Get the Compression property of BinData.NonNegativeLong
getMaskBinDataLength(int ROIIndex, int shapeIndex)
Get the Length property of BinData.Color
getMaskFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Mask.FillRule
getMaskFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Mask.FontFamily
getMaskFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Mask.Length
getMaskFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Mask.FontStyle
getMaskFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Mask.java.lang.Double
getMaskHeight(int ROIIndex, int shapeIndex)
Get the Height property of Mask.java.lang.String
getMaskID(int ROIIndex, int shapeIndex)
Get the ID property of Mask.java.lang.Boolean
getMaskLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Mask.Color
getMaskStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Mask.java.lang.String
getMaskStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Mask.Length
getMaskStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Mask.java.lang.String
getMaskText(int ROIIndex, int shapeIndex)
Get the Text property of Mask.NonNegativeInteger
getMaskTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Mask.NonNegativeInteger
getMaskTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Mask.NonNegativeInteger
getMaskTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Mask.AffineTransform
getMaskTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Mask.java.lang.Double
getMaskWidth(int ROIIndex, int shapeIndex)
Get the Width property of Mask.java.lang.Double
getMaskX(int ROIIndex, int shapeIndex)
Get the X property of Mask.java.lang.Double
getMaskY(int ROIIndex, int shapeIndex)
Get the Y property of Mask.int
getMicrobeamManipulationCount(int experimentIndex)
Get the number of MicrobeamManipulation elements.java.lang.String
getMicrobeamManipulationDescription(int experimentIndex, int microbeamManipulationIndex)
Get the Description property of MicrobeamManipulation.java.lang.String
getMicrobeamManipulationExperimenterRef(int experimentIndex, int microbeamManipulationIndex)
Get the ExperimenterRef property of MicrobeamManipulation.java.lang.String
getMicrobeamManipulationID(int experimentIndex, int microbeamManipulationIndex)
Get the ID property of MicrobeamManipulation.PercentFraction
getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
Get the Attenuation property of LightSourceSettings.int
getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex, int microbeamManipulationIndex)
Get the number of LightSourceSettings elements in MicrobeamManipulation.java.lang.String
getMicrobeamManipulationLightSourceSettingsID(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
Get the ID property of LightSourceSettings.Length
getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
Get the Wavelength property of LightSourceSettings.int
getMicrobeamManipulationRefCount(int imageIndex)
Get the number of MicrobeamManipulationRef elements.java.lang.String
getMicrobeamManipulationROIRef(int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)
Get the ROIRef property of MicrobeamManipulation.int
getMicrobeamManipulationROIRefCount(int experimentIndex, int microbeamManipulationIndex)
Get the number of ROIRef elements in MicrobeamManipulation.MicrobeamManipulationType
getMicrobeamManipulationType(int experimentIndex, int microbeamManipulationIndex)
Get the Type property of MicrobeamManipulation.java.lang.String
getMicroscopeLotNumber(int instrumentIndex)
Get the LotNumber property of Microscope.java.lang.String
getMicroscopeManufacturer(int instrumentIndex)
Get the Manufacturer property of Microscope.java.lang.String
getMicroscopeModel(int instrumentIndex)
Get the Model property of Microscope.java.lang.String
getMicroscopeSerialNumber(int instrumentIndex)
Get the SerialNumber property of Microscope.MicroscopeType
getMicroscopeType(int instrumentIndex)
Get the Type property of Microscope.java.lang.String
getObjectiveAnnotationRef(int instrumentIndex, int objectiveIndex, int annotationRefIndex)
Get the AnnotationRef property of Objective.int
getObjectiveAnnotationRefCount(int instrumentIndex, int objectiveIndex)
Get the number of AnnotationRef elements in Objective.java.lang.Double
getObjectiveCalibratedMagnification(int instrumentIndex, int objectiveIndex)
Get the CalibratedMagnification property of Objective.Correction
getObjectiveCorrection(int instrumentIndex, int objectiveIndex)
Get the Correction property of Objective.int
getObjectiveCount(int instrumentIndex)
Get the number of Objective elements.java.lang.String
getObjectiveID(int instrumentIndex, int objectiveIndex)
Get the ID property of Objective.Immersion
getObjectiveImmersion(int instrumentIndex, int objectiveIndex)
Get the Immersion property of Objective.java.lang.Boolean
getObjectiveIris(int instrumentIndex, int objectiveIndex)
Get the Iris property of Objective.java.lang.Double
getObjectiveLensNA(int instrumentIndex, int objectiveIndex)
Get the LensNA property of Objective.java.lang.String
getObjectiveLotNumber(int instrumentIndex, int objectiveIndex)
Get the LotNumber property of Objective.java.lang.String
getObjectiveManufacturer(int instrumentIndex, int objectiveIndex)
Get the Manufacturer property of Objective.java.lang.String
getObjectiveModel(int instrumentIndex, int objectiveIndex)
Get the Model property of Objective.java.lang.Double
getObjectiveNominalMagnification(int instrumentIndex, int objectiveIndex)
Get the NominalMagnification property of Objective.java.lang.String
getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex)
Get the SerialNumber property of Objective.java.lang.Double
getObjectiveSettingsCorrectionCollar(int imageIndex)
Get the CorrectionCollar property of ObjectiveSettings.java.lang.String
getObjectiveSettingsID(int imageIndex)
Get the ID property of ObjectiveSettings.Medium
getObjectiveSettingsMedium(int imageIndex)
Get the Medium property of ObjectiveSettings.java.lang.Double
getObjectiveSettingsRefractiveIndex(int imageIndex)
Get the RefractiveIndex property of ObjectiveSettings.Length
getObjectiveWorkingDistance(int instrumentIndex, int objectiveIndex)
Get the WorkingDistance property of Objective.java.lang.Boolean
getPixelsBigEndian(int imageIndex)
Get the BigEndian property of Pixels.byte[]
getPixelsBinData(int imageIndex, int binDataIndex)
Get the Base64Binary property of BinData.java.lang.Boolean
getPixelsBinDataBigEndian(int imageIndex, int binDataIndex)
Get the BigEndian property of BinData.Compression
getPixelsBinDataCompression(int imageIndex, int binDataIndex)
Get the Compression property of BinData.int
getPixelsBinDataCount(int imageIndex)
Get the number of BinData elements in Pixels.NonNegativeLong
getPixelsBinDataLength(int imageIndex, int binDataIndex)
Get the Length property of BinData.DimensionOrder
getPixelsDimensionOrder(int imageIndex)
Get the DimensionOrder property of Pixels.java.lang.String
getPixelsID(int imageIndex)
Get the ID property of Pixels.java.lang.Boolean
getPixelsInterleaved(int imageIndex)
Get the Interleaved property of Pixels.Length
getPixelsPhysicalSizeX(int imageIndex)
Get the PhysicalSizeX property of Pixels.Length
getPixelsPhysicalSizeY(int imageIndex)
Get the PhysicalSizeY property of Pixels.Length
getPixelsPhysicalSizeZ(int imageIndex)
Get the PhysicalSizeZ property of Pixels.PositiveInteger
getPixelsSignificantBits(int imageIndex)
Get the SignificantBits property of Pixels.PositiveInteger
getPixelsSizeC(int imageIndex)
Get the SizeC property of Pixels.PositiveInteger
getPixelsSizeT(int imageIndex)
Get the SizeT property of Pixels.PositiveInteger
getPixelsSizeX(int imageIndex)
Get the SizeX property of Pixels.PositiveInteger
getPixelsSizeY(int imageIndex)
Get the SizeY property of Pixels.PositiveInteger
getPixelsSizeZ(int imageIndex)
Get the SizeZ property of Pixels.Time
getPixelsTimeIncrement(int imageIndex)
Get the TimeIncrement property of Pixels.PixelType
getPixelsType(int imageIndex)
Get the Type property of Pixels.java.lang.String
getPlaneAnnotationRef(int imageIndex, int planeIndex, int annotationRefIndex)
Get the AnnotationRef property of Plane.int
getPlaneAnnotationRefCount(int imageIndex, int planeIndex)
Get the number of AnnotationRef elements in Plane.int
getPlaneCount(int imageIndex)
Get the number of Plane elements.Time
getPlaneDeltaT(int imageIndex, int planeIndex)
Get the DeltaT property of Plane.Time
getPlaneExposureTime(int imageIndex, int planeIndex)
Get the ExposureTime property of Plane.java.lang.String
getPlaneHashSHA1(int imageIndex, int planeIndex)
Get the HashSHA1 property of Plane.Length
getPlanePositionX(int imageIndex, int planeIndex)
Get the PositionX property of Plane.Length
getPlanePositionY(int imageIndex, int planeIndex)
Get the PositionY property of Plane.Length
getPlanePositionZ(int imageIndex, int planeIndex)
Get the PositionZ property of Plane.NonNegativeInteger
getPlaneTheC(int imageIndex, int planeIndex)
Get the TheC property of Plane.NonNegativeInteger
getPlaneTheT(int imageIndex, int planeIndex)
Get the TheT property of Plane.NonNegativeInteger
getPlaneTheZ(int imageIndex, int planeIndex)
Get the TheZ property of Plane.java.lang.String
getPlateAcquisitionAnnotationRef(int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)
Get the AnnotationRef property of PlateAcquisition.int
getPlateAcquisitionAnnotationRefCount(int plateIndex, int plateAcquisitionIndex)
Get the number of AnnotationRef elements in PlateAcquisition.int
getPlateAcquisitionCount(int plateIndex)
Get the number of PlateAcquisition elements.java.lang.String
getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex)
Get the Description property of PlateAcquisition.Timestamp
getPlateAcquisitionEndTime(int plateIndex, int plateAcquisitionIndex)
Get the EndTime property of PlateAcquisition.java.lang.String
getPlateAcquisitionID(int plateIndex, int plateAcquisitionIndex)
Get the ID property of PlateAcquisition.PositiveInteger
getPlateAcquisitionMaximumFieldCount(int plateIndex, int plateAcquisitionIndex)
Get the MaximumFieldCount property of PlateAcquisition.java.lang.String
getPlateAcquisitionName(int plateIndex, int plateAcquisitionIndex)
Get the Name property of PlateAcquisition.Timestamp
getPlateAcquisitionStartTime(int plateIndex, int plateAcquisitionIndex)
Get the StartTime property of PlateAcquisition.java.lang.String
getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)
Get the WellSampleRef property of PlateAcquisition.java.lang.String
getPlateAnnotationRef(int plateIndex, int annotationRefIndex)
Get the AnnotationRef property of Plate.int
getPlateAnnotationRefCount(int plateIndex)
Get the number of AnnotationRef elements in Plate.NamingConvention
getPlateColumnNamingConvention(int plateIndex)
Get the ColumnNamingConvention property of Plate.PositiveInteger
getPlateColumns(int plateIndex)
Get the Columns property of Plate.int
getPlateCount()
Get the number of Plate elements.java.lang.String
getPlateDescription(int plateIndex)
Get the Description property of Plate.java.lang.String
getPlateExternalIdentifier(int plateIndex)
Get the ExternalIdentifier property of Plate.NonNegativeInteger
getPlateFieldIndex(int plateIndex)
Get the FieldIndex property of Plate.java.lang.String
getPlateID(int plateIndex)
Get the ID property of Plate.java.lang.String
getPlateName(int plateIndex)
Get the Name property of Plate.int
getPlateRefCount(int screenIndex)
Get the number of PlateRef elements.NamingConvention
getPlateRowNamingConvention(int plateIndex)
Get the RowNamingConvention property of Plate.PositiveInteger
getPlateRows(int plateIndex)
Get the Rows property of Plate.java.lang.String
getPlateStatus(int plateIndex)
Get the Status property of Plate.Length
getPlateWellOriginX(int plateIndex)
Get the WellOriginX property of Plate.Length
getPlateWellOriginY(int plateIndex)
Get the WellOriginY property of Plate.java.lang.String
getPointAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Point.Color
getPointFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Point.FillRule
getPointFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Point.FontFamily
getPointFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Point.Length
getPointFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Point.FontStyle
getPointFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Point.java.lang.String
getPointID(int ROIIndex, int shapeIndex)
Get the ID property of Point.java.lang.Boolean
getPointLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Point.Color
getPointStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Point.java.lang.String
getPointStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Point.Length
getPointStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Point.java.lang.String
getPointText(int ROIIndex, int shapeIndex)
Get the Text property of Point.NonNegativeInteger
getPointTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Point.NonNegativeInteger
getPointTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Point.NonNegativeInteger
getPointTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Point.AffineTransform
getPointTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Point.java.lang.Double
getPointX(int ROIIndex, int shapeIndex)
Get the X property of Point.java.lang.Double
getPointY(int ROIIndex, int shapeIndex)
Get the Y property of Point.java.lang.String
getPolygonAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Polygon.Color
getPolygonFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Polygon.FillRule
getPolygonFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Polygon.FontFamily
getPolygonFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Polygon.Length
getPolygonFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Polygon.FontStyle
getPolygonFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Polygon.java.lang.String
getPolygonID(int ROIIndex, int shapeIndex)
Get the ID property of Polygon.java.lang.Boolean
getPolygonLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Polygon.java.lang.String
getPolygonPoints(int ROIIndex, int shapeIndex)
Get the Points property of Polygon.Color
getPolygonStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Polygon.java.lang.String
getPolygonStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Polygon.Length
getPolygonStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Polygon.java.lang.String
getPolygonText(int ROIIndex, int shapeIndex)
Get the Text property of Polygon.NonNegativeInteger
getPolygonTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Polygon.NonNegativeInteger
getPolygonTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Polygon.NonNegativeInteger
getPolygonTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Polygon.AffineTransform
getPolygonTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Polygon.java.lang.String
getPolylineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Polyline.Color
getPolylineFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Polyline.FillRule
getPolylineFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Polyline.FontFamily
getPolylineFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Polyline.Length
getPolylineFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Polyline.FontStyle
getPolylineFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Polyline.java.lang.String
getPolylineID(int ROIIndex, int shapeIndex)
Get the ID property of Polyline.java.lang.Boolean
getPolylineLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Polyline.Marker
getPolylineMarkerEnd(int ROIIndex, int shapeIndex)
Get the MarkerEnd property of Polyline.Marker
getPolylineMarkerStart(int ROIIndex, int shapeIndex)
Get the MarkerStart property of Polyline.java.lang.String
getPolylinePoints(int ROIIndex, int shapeIndex)
Get the Points property of Polyline.Color
getPolylineStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Polyline.java.lang.String
getPolylineStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Polyline.Length
getPolylineStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Polyline.java.lang.String
getPolylineText(int ROIIndex, int shapeIndex)
Get the Text property of Polyline.NonNegativeInteger
getPolylineTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Polyline.NonNegativeInteger
getPolylineTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Polyline.NonNegativeInteger
getPolylineTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Polyline.AffineTransform
getPolylineTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Polyline.java.lang.String
getProjectAnnotationRef(int projectIndex, int annotationRefIndex)
Get the AnnotationRef property of Project.int
getProjectAnnotationRefCount(int projectIndex)
Get the number of AnnotationRef elements in Project.int
getProjectCount()
Get the number of Project elements.java.lang.String
getProjectDatasetRef(int projectIndex, int datasetRefIndex)
Get the DatasetRef property of Project.java.lang.String
getProjectDescription(int projectIndex)
Get the Description property of Project.java.lang.String
getProjectExperimenterGroupRef(int projectIndex)
Get the ExperimenterGroupRef property of Project.java.lang.String
getProjectExperimenterRef(int projectIndex)
Get the ExperimenterRef property of Project.java.lang.String
getProjectID(int projectIndex)
Get the ID property of Project.java.lang.String
getProjectName(int projectIndex)
Get the Name property of Project.java.lang.String
getReagentAnnotationRef(int screenIndex, int reagentIndex, int annotationRefIndex)
Get the AnnotationRef property of Reagent.int
getReagentAnnotationRefCount(int screenIndex, int reagentIndex)
Get the number of AnnotationRef elements in Reagent.int
getReagentCount(int screenIndex)
Get the number of Reagent elements.java.lang.String
getReagentDescription(int screenIndex, int reagentIndex)
Get the Description property of Reagent.java.lang.String
getReagentID(int screenIndex, int reagentIndex)
Get the ID property of Reagent.java.lang.String
getReagentName(int screenIndex, int reagentIndex)
Get the Name property of Reagent.java.lang.String
getReagentReagentIdentifier(int screenIndex, int reagentIndex)
Get the ReagentIdentifier property of Reagent.java.lang.String
getRectangleAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)
Get the AnnotationRef property of Rectangle.Color
getRectangleFillColor(int ROIIndex, int shapeIndex)
Get the FillColor property of Rectangle.FillRule
getRectangleFillRule(int ROIIndex, int shapeIndex)
Get the FillRule property of Rectangle.FontFamily
getRectangleFontFamily(int ROIIndex, int shapeIndex)
Get the FontFamily property of Rectangle.Length
getRectangleFontSize(int ROIIndex, int shapeIndex)
Get the FontSize property of Rectangle.FontStyle
getRectangleFontStyle(int ROIIndex, int shapeIndex)
Get the FontStyle property of Rectangle.java.lang.Double
getRectangleHeight(int ROIIndex, int shapeIndex)
Get the Height property of Rectangle.java.lang.String
getRectangleID(int ROIIndex, int shapeIndex)
Get the ID property of Rectangle.java.lang.Boolean
getRectangleLocked(int ROIIndex, int shapeIndex)
Get the Locked property of Rectangle.Color
getRectangleStrokeColor(int ROIIndex, int shapeIndex)
Get the StrokeColor property of Rectangle.java.lang.String
getRectangleStrokeDashArray(int ROIIndex, int shapeIndex)
Get the StrokeDashArray property of Rectangle.Length
getRectangleStrokeWidth(int ROIIndex, int shapeIndex)
Get the StrokeWidth property of Rectangle.java.lang.String
getRectangleText(int ROIIndex, int shapeIndex)
Get the Text property of Rectangle.NonNegativeInteger
getRectangleTheC(int ROIIndex, int shapeIndex)
Get the TheC property of Rectangle.NonNegativeInteger
getRectangleTheT(int ROIIndex, int shapeIndex)
Get the TheT property of Rectangle.NonNegativeInteger
getRectangleTheZ(int ROIIndex, int shapeIndex)
Get the TheZ property of Rectangle.AffineTransform
getRectangleTransform(int ROIIndex, int shapeIndex)
Get the Transform property of Rectangle.java.lang.Double
getRectangleWidth(int ROIIndex, int shapeIndex)
Get the Width property of Rectangle.java.lang.Double
getRectangleX(int ROIIndex, int shapeIndex)
Get the X property of Rectangle.java.lang.Double
getRectangleY(int ROIIndex, int shapeIndex)
Get the Y property of Rectangle.java.lang.String
getRightsRightsHeld()
Get the RightsHeld property of Rights.java.lang.String
getRightsRightsHolder()
Get the RightsHolder property of Rights.java.lang.String
getROIAnnotationRef(int ROIIndex, int annotationRefIndex)
Get the AnnotationRef property of ROI.int
getROIAnnotationRefCount(int ROIIndex)
Get the number of AnnotationRef elements in ROI.int
getROICount()
Get the number of ROI elements.java.lang.String
getROIDescription(int ROIIndex)
Get the Description property of ROI.java.lang.String
getROIID(int ROIIndex)
Get the ID property of ROI.java.lang.String
getROIName(int ROIIndex)
Get the Name property of ROI.MetadataRoot
getRoot()
Get the root node of the metadata.java.lang.String
getScreenAnnotationRef(int screenIndex, int annotationRefIndex)
Get the AnnotationRef property of Screen.int
getScreenAnnotationRefCount(int screenIndex)
Get the number of AnnotationRef elements in Screen.int
getScreenCount()
Get the number of Screen elements.java.lang.String
getScreenDescription(int screenIndex)
Get the Description property of Screen.java.lang.String
getScreenID(int screenIndex)
Get the ID property of Screen.java.lang.String
getScreenName(int screenIndex)
Get the Name property of Screen.java.lang.String
getScreenPlateRef(int screenIndex, int plateRefIndex)
Get the PlateRef property of Screen.java.lang.String
getScreenProtocolDescription(int screenIndex)
Get the ProtocolDescription property of Screen.java.lang.String
getScreenProtocolIdentifier(int screenIndex)
Get the ProtocolIdentifier property of Screen.java.lang.String
getScreenReagentSetDescription(int screenIndex)
Get the ReagentSetDescription property of Screen.java.lang.String
getScreenReagentSetIdentifier(int screenIndex)
Get the ReagentSetIdentifier property of Screen.java.lang.String
getScreenType(int screenIndex)
Get the Type property of Screen.int
getShapeAnnotationRefCount(int ROIIndex, int shapeIndex)
Get the number of AnnotationRef elements in Shape.int
getShapeCount(int ROIIndex)
Get the number of Shape elements.java.lang.String
getShapeType(int ROIIndex, int shapeIndex)
Get the type of a Shape.java.lang.String
getStageLabelName(int imageIndex)
Get the Name property of StageLabel.Length
getStageLabelX(int imageIndex)
Get the X property of StageLabel.Length
getStageLabelY(int imageIndex)
Get the Y property of StageLabel.Length
getStageLabelZ(int imageIndex)
Get the Z property of StageLabel.int
getTagAnnotationAnnotationCount(int tagAnnotationIndex)
Get the number of links to a TagAnnotation.java.lang.String
getTagAnnotationAnnotationRef(int tagAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of TagAnnotation.java.lang.String
getTagAnnotationAnnotator(int tagAnnotationIndex)
Get the Annotator property of TagAnnotation.int
getTagAnnotationCount()
Get the number of TagAnnotation elements.java.lang.String
getTagAnnotationDescription(int tagAnnotationIndex)
Get the Description property of TagAnnotation.java.lang.String
getTagAnnotationID(int tagAnnotationIndex)
Get the ID property of TagAnnotation.java.lang.String
getTagAnnotationNamespace(int tagAnnotationIndex)
Get the Namespace property of TagAnnotation.java.lang.String
getTagAnnotationValue(int tagAnnotationIndex)
Get the Value property of TagAnnotation.int
getTermAnnotationAnnotationCount(int termAnnotationIndex)
Get the number of links to a TermAnnotation.java.lang.String
getTermAnnotationAnnotationRef(int termAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of TermAnnotation.java.lang.String
getTermAnnotationAnnotator(int termAnnotationIndex)
Get the Annotator property of TermAnnotation.int
getTermAnnotationCount()
Get the number of TermAnnotation elements.java.lang.String
getTermAnnotationDescription(int termAnnotationIndex)
Get the Description property of TermAnnotation.java.lang.String
getTermAnnotationID(int termAnnotationIndex)
Get the ID property of TermAnnotation.java.lang.String
getTermAnnotationNamespace(int termAnnotationIndex)
Get the Namespace property of TermAnnotation.java.lang.String
getTermAnnotationValue(int termAnnotationIndex)
Get the Value property of TermAnnotation.int
getTiffDataCount(int imageIndex)
Get the number of TiffData elements.NonNegativeInteger
getTiffDataFirstC(int imageIndex, int tiffDataIndex)
Get the FirstC property of TiffData.NonNegativeInteger
getTiffDataFirstT(int imageIndex, int tiffDataIndex)
Get the FirstT property of TiffData.NonNegativeInteger
getTiffDataFirstZ(int imageIndex, int tiffDataIndex)
Get the FirstZ property of TiffData.NonNegativeInteger
getTiffDataIFD(int imageIndex, int tiffDataIndex)
Get the IFD property of TiffData.NonNegativeInteger
getTiffDataPlaneCount(int imageIndex, int tiffDataIndex)
Get the PlaneCount property of TiffData.int
getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)
Get the number of links to a TimestampAnnotation.java.lang.String
getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of TimestampAnnotation.java.lang.String
getTimestampAnnotationAnnotator(int timestampAnnotationIndex)
Get the Annotator property of TimestampAnnotation.int
getTimestampAnnotationCount()
Get the number of TimestampAnnotation elements.java.lang.String
getTimestampAnnotationDescription(int timestampAnnotationIndex)
Get the Description property of TimestampAnnotation.java.lang.String
getTimestampAnnotationID(int timestampAnnotationIndex)
Get the ID property of TimestampAnnotation.java.lang.String
getTimestampAnnotationNamespace(int timestampAnnotationIndex)
Get the Namespace property of TimestampAnnotation.Timestamp
getTimestampAnnotationValue(int timestampAnnotationIndex)
Get the Value property of TimestampAnnotation.Length
getTransmittanceRangeCutIn(int instrumentIndex, int filterIndex)
Get the CutIn property of TransmittanceRange.Length
getTransmittanceRangeCutInTolerance(int instrumentIndex, int filterIndex)
Get the CutInTolerance property of TransmittanceRange.Length
getTransmittanceRangeCutOut(int instrumentIndex, int filterIndex)
Get the CutOut property of TransmittanceRange.Length
getTransmittanceRangeCutOutTolerance(int instrumentIndex, int filterIndex)
Get the CutOutTolerance property of TransmittanceRange.PercentFraction
getTransmittanceRangeTransmittance(int instrumentIndex, int filterIndex)
Get the Transmittance property of TransmittanceRange.java.lang.String
getUUID()
Gets the UUID associated with this collection of metadata.java.lang.String
getUUIDFileName(int imageIndex, int tiffDataIndex)
Get the FileName property of UUID.java.lang.String
getUUIDValue(int imageIndex, int tiffDataIndex)
Get the text value of UUID.java.lang.String
getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex)
Get the AnnotationRef property of Well.int
getWellAnnotationRefCount(int plateIndex, int wellIndex)
Get the number of AnnotationRef elements in Well.Color
getWellColor(int plateIndex, int wellIndex)
Get the Color property of Well.NonNegativeInteger
getWellColumn(int plateIndex, int wellIndex)
Get the Column property of Well.int
getWellCount(int plateIndex)
Get the number of Well elements.java.lang.String
getWellExternalDescription(int plateIndex, int wellIndex)
Get the ExternalDescription property of Well.java.lang.String
getWellExternalIdentifier(int plateIndex, int wellIndex)
Get the ExternalIdentifier property of Well.java.lang.String
getWellID(int plateIndex, int wellIndex)
Get the ID property of Well.java.lang.String
getWellReagentRef(int plateIndex, int wellIndex)
Get the ReagentRef property of Well.NonNegativeInteger
getWellRow(int plateIndex, int wellIndex)
Get the Row property of Well.int
getWellSampleCount(int plateIndex, int wellIndex)
Get the number of WellSample elements.java.lang.String
getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex)
Get the ID property of WellSample.java.lang.String
getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex)
Get the ImageRef property of WellSample.NonNegativeInteger
getWellSampleIndex(int plateIndex, int wellIndex, int wellSampleIndex)
Get the Index property of WellSample.Length
getWellSamplePositionX(int plateIndex, int wellIndex, int wellSampleIndex)
Get the PositionX property of WellSample.Length
getWellSamplePositionY(int plateIndex, int wellIndex, int wellSampleIndex)
Get the PositionY property of WellSample.int
getWellSampleRefCount(int plateIndex, int plateAcquisitionIndex)
Get the number of WellSampleRef elements.Timestamp
getWellSampleTimepoint(int plateIndex, int wellIndex, int wellSampleIndex)
Get the Timepoint property of WellSample.java.lang.String
getWellType(int plateIndex, int wellIndex)
Get the Type property of Well.int
getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)
Get the number of links to an XMLAnnotation.java.lang.String
getXMLAnnotationAnnotationRef(int XMLAnnotationIndex, int annotationRefIndex)
Get the AnnotationRef property of XMLAnnotation.java.lang.String
getXMLAnnotationAnnotator(int XMLAnnotationIndex)
Get the Annotator property of XMLAnnotation.int
getXMLAnnotationCount()
Get the number of XMLAnnotation elements.java.lang.String
getXMLAnnotationDescription(int XMLAnnotationIndex)
Get the Description property of XMLAnnotation.java.lang.String
getXMLAnnotationID(int XMLAnnotationIndex)
Get the ID property of XMLAnnotation.java.lang.String
getXMLAnnotationNamespace(int XMLAnnotationIndex)
Get the Namespace property of XMLAnnotation.java.lang.String
getXMLAnnotationValue(int XMLAnnotationIndex)
Get the Value property of XMLAnnotation.int
resolveReferences()
Resolve model object cross-references.void
setArcAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Set the AnnotationRef property of Arc.void
setArcID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
Set the ID property of Arc.void
setArcLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
Set the LotNumber property of Arc.void
setArcManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
Set the Manufacturer property of Arc.void
setArcModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
Set the Model property of Arc.void
setArcPower(Power power, int instrumentIndex, int lightSourceIndex)
Set the Power property of Arc.void
setArcSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
Set the SerialNumber property of Arc.void
setArcType(ArcType type, int instrumentIndex, int lightSourceIndex)
Set the Type property of Arc.void
setBinaryFileBinData(byte[] base64Binary, int fileAnnotationIndex)
Set the Base64Binary property of BinData.void
setBinaryFileBinDataBigEndian(java.lang.Boolean bigEndian, int fileAnnotationIndex)
Set the BigEndian property of BinData.void
setBinaryFileBinDataCompression(Compression compression, int fileAnnotationIndex)
Set the Compression property of BinData.void
setBinaryFileBinDataLength(NonNegativeLong length, int fileAnnotationIndex)
Set the Length property of BinData.void
setBinaryFileFileName(java.lang.String fileName, int fileAnnotationIndex)
Set the FileName property of BinaryFile.void
setBinaryFileMIMEType(java.lang.String mimeType, int fileAnnotationIndex)
Set the MIMEType property of BinaryFile.void
setBinaryFileSize(NonNegativeLong size, int fileAnnotationIndex)
Set the Size property of BinaryFile.void
setBinaryOnlyMetadataFile(java.lang.String metadataFile)
Set the MetadataFile property of BinaryOnly.void
setBinaryOnlyUUID(java.lang.String uuid)
Set the UUID property of BinaryOnly.void
setBooleanAnnotationAnnotationRef(java.lang.String annotation, int booleanAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of BooleanAnnotation.void
setBooleanAnnotationAnnotator(java.lang.String annotator, int booleanAnnotationIndex)
Set the Annotator property of BooleanAnnotation.void
setBooleanAnnotationDescription(java.lang.String description, int booleanAnnotationIndex)
Set the Description property of BooleanAnnotation.void
setBooleanAnnotationID(java.lang.String id, int booleanAnnotationIndex)
Set the ID property of BooleanAnnotation.void
setBooleanAnnotationNamespace(java.lang.String namespace, int booleanAnnotationIndex)
Set the Namespace property of BooleanAnnotation.void
setBooleanAnnotationValue(java.lang.Boolean value, int booleanAnnotationIndex)
Set the Value property of BooleanAnnotation.void
setChannelAcquisitionMode(AcquisitionMode acquisitionMode, int imageIndex, int channelIndex)
Set the AcquisitionMode property of Channel.void
setChannelAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)
Set the AnnotationRef property of Channel.void
setChannelColor(Color color, int imageIndex, int channelIndex)
Set the Color property of Channel.void
setChannelContrastMethod(ContrastMethod contrastMethod, int imageIndex, int channelIndex)
Set the ContrastMethod property of Channel.void
setChannelEmissionWavelength(Length emissionWavelength, int imageIndex, int channelIndex)
Set the EmissionWavelength property of Channel.void
setChannelExcitationWavelength(Length excitationWavelength, int imageIndex, int channelIndex)
Set the ExcitationWavelength property of Channel.void
setChannelFilterSetRef(java.lang.String filterSet, int imageIndex, int channelIndex)
Set the FilterSetRef property of Channel.void
setChannelFluor(java.lang.String fluor, int imageIndex, int channelIndex)
Set the Fluor property of Channel.void
setChannelID(java.lang.String id, int imageIndex, int channelIndex)
Set the ID property of Channel.void
setChannelIlluminationType(IlluminationType illuminationType, int imageIndex, int channelIndex)
Set the IlluminationType property of Channel.void
setChannelLightSourceSettingsAttenuation(PercentFraction attenuation, int imageIndex, int channelIndex)
Set the Attenuation property of LightSourceSettings.void
setChannelLightSourceSettingsID(java.lang.String id, int imageIndex, int channelIndex)
Set the ID property of LightSourceSettings.void
setChannelLightSourceSettingsWavelength(Length wavelength, int imageIndex, int channelIndex)
Set the Wavelength property of LightSourceSettings.void
setChannelName(java.lang.String name, int imageIndex, int channelIndex)
Set the Name property of Channel.void
setChannelNDFilter(java.lang.Double ndFilter, int imageIndex, int channelIndex)
Set the NDFilter property of Channel.void
setChannelPinholeSize(Length pinholeSize, int imageIndex, int channelIndex)
Set the PinholeSize property of Channel.void
setChannelPockelCellSetting(java.lang.Integer pockelCellSetting, int imageIndex, int channelIndex)
Set the PockelCellSetting property of Channel.void
setChannelSamplesPerPixel(PositiveInteger samplesPerPixel, int imageIndex, int channelIndex)
Set the SamplesPerPixel property of Channel.void
setCommentAnnotationAnnotationRef(java.lang.String annotation, int commentAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of CommentAnnotation.void
setCommentAnnotationAnnotator(java.lang.String annotator, int commentAnnotationIndex)
Set the Annotator property of CommentAnnotation.void
setCommentAnnotationDescription(java.lang.String description, int commentAnnotationIndex)
Set the Description property of CommentAnnotation.void
setCommentAnnotationID(java.lang.String id, int commentAnnotationIndex)
Set the ID property of CommentAnnotation.void
setCommentAnnotationNamespace(java.lang.String namespace, int commentAnnotationIndex)
Set the Namespace property of CommentAnnotation.void
setCommentAnnotationValue(java.lang.String value, int commentAnnotationIndex)
Set the Value property of CommentAnnotation.void
setCreator(java.lang.String creator)
Sets the Creator associated with this collection of metadata.void
setDatasetAnnotationRef(java.lang.String annotation, int datasetIndex, int annotationRefIndex)
Set the AnnotationRef property of Dataset.void
setDatasetDescription(java.lang.String description, int datasetIndex)
Set the Description property of Dataset.void
setDatasetExperimenterGroupRef(java.lang.String experimenterGroup, int datasetIndex)
Set the ExperimenterGroupRef property of Dataset.void
setDatasetExperimenterRef(java.lang.String experimenter, int datasetIndex)
Set the ExperimenterRef property of Dataset.void
setDatasetID(java.lang.String id, int datasetIndex)
Set the ID property of Dataset.void
setDatasetImageRef(java.lang.String image, int datasetIndex, int imageRefIndex)
Set the ImageRef property of Dataset.void
setDatasetName(java.lang.String name, int datasetIndex)
Set the Name property of Dataset.void
setDetectorAmplificationGain(java.lang.Double amplificationGain, int instrumentIndex, int detectorIndex)
Set the AmplificationGain property of Detector.void
setDetectorAnnotationRef(java.lang.String annotation, int instrumentIndex, int detectorIndex, int annotationRefIndex)
Set the AnnotationRef property of Detector.void
setDetectorGain(java.lang.Double gain, int instrumentIndex, int detectorIndex)
Set the Gain property of Detector.void
setDetectorID(java.lang.String id, int instrumentIndex, int detectorIndex)
Set the ID property of Detector.void
setDetectorLotNumber(java.lang.String lotNumber, int instrumentIndex, int detectorIndex)
Set the LotNumber property of Detector.void
setDetectorManufacturer(java.lang.String manufacturer, int instrumentIndex, int detectorIndex)
Set the Manufacturer property of Detector.void
setDetectorModel(java.lang.String model, int instrumentIndex, int detectorIndex)
Set the Model property of Detector.void
setDetectorOffset(java.lang.Double offset, int instrumentIndex, int detectorIndex)
Set the Offset property of Detector.void
setDetectorSerialNumber(java.lang.String serialNumber, int instrumentIndex, int detectorIndex)
Set the SerialNumber property of Detector.void
setDetectorSettingsBinning(Binning binning, int imageIndex, int channelIndex)
Set the Binning property of DetectorSettings.void
setDetectorSettingsGain(java.lang.Double gain, int imageIndex, int channelIndex)
Set the Gain property of DetectorSettings.void
setDetectorSettingsID(java.lang.String id, int imageIndex, int channelIndex)
Set the ID property of DetectorSettings.void
setDetectorSettingsIntegration(PositiveInteger integration, int imageIndex, int channelIndex)
Set the Integration property of DetectorSettings.void
setDetectorSettingsOffset(java.lang.Double offset, int imageIndex, int channelIndex)
Set the Offset property of DetectorSettings.void
setDetectorSettingsReadOutRate(Frequency readOutRate, int imageIndex, int channelIndex)
Set the ReadOutRate property of DetectorSettings.void
setDetectorSettingsVoltage(ElectricPotential voltage, int imageIndex, int channelIndex)
Set the Voltage property of DetectorSettings.void
setDetectorSettingsZoom(java.lang.Double zoom, int imageIndex, int channelIndex)
Set the Zoom property of DetectorSettings.void
setDetectorType(DetectorType type, int instrumentIndex, int detectorIndex)
Set the Type property of Detector.void
setDetectorVoltage(ElectricPotential voltage, int instrumentIndex, int detectorIndex)
Set the Voltage property of Detector.void
setDetectorZoom(java.lang.Double zoom, int instrumentIndex, int detectorIndex)
Set the Zoom property of Detector.void
setDichroicAnnotationRef(java.lang.String annotation, int instrumentIndex, int dichroicIndex, int annotationRefIndex)
Set the AnnotationRef property of Dichroic.void
setDichroicID(java.lang.String id, int instrumentIndex, int dichroicIndex)
Set the ID property of Dichroic.void
setDichroicLotNumber(java.lang.String lotNumber, int instrumentIndex, int dichroicIndex)
Set the LotNumber property of Dichroic.void
setDichroicManufacturer(java.lang.String manufacturer, int instrumentIndex, int dichroicIndex)
Set the Manufacturer property of Dichroic.void
setDichroicModel(java.lang.String model, int instrumentIndex, int dichroicIndex)
Set the Model property of Dichroic.void
setDichroicSerialNumber(java.lang.String serialNumber, int instrumentIndex, int dichroicIndex)
Set the SerialNumber property of Dichroic.void
setDoubleAnnotationAnnotationRef(java.lang.String annotation, int doubleAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of DoubleAnnotation.void
setDoubleAnnotationAnnotator(java.lang.String annotator, int doubleAnnotationIndex)
Set the Annotator property of DoubleAnnotation.void
setDoubleAnnotationDescription(java.lang.String description, int doubleAnnotationIndex)
Set the Description property of DoubleAnnotation.void
setDoubleAnnotationID(java.lang.String id, int doubleAnnotationIndex)
Set the ID property of DoubleAnnotation.void
setDoubleAnnotationNamespace(java.lang.String namespace, int doubleAnnotationIndex)
Set the Namespace property of DoubleAnnotation.void
setDoubleAnnotationValue(java.lang.Double value, int doubleAnnotationIndex)
Set the Value property of DoubleAnnotation.void
setEllipseAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Ellipse.void
setEllipseFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Ellipse.void
setEllipseFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Ellipse.void
setEllipseFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Ellipse.void
setEllipseFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Ellipse.void
setEllipseFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Ellipse.void
setEllipseID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Ellipse.void
setEllipseLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Ellipse.void
setEllipseRadiusX(java.lang.Double radiusX, int ROIIndex, int shapeIndex)
Set the RadiusX property of Ellipse.void
setEllipseRadiusY(java.lang.Double radiusY, int ROIIndex, int shapeIndex)
Set the RadiusY property of Ellipse.void
setEllipseStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Ellipse.void
setEllipseStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Ellipse.void
setEllipseStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Ellipse.void
setEllipseText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Ellipse.void
setEllipseTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Ellipse.void
setEllipseTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Ellipse.void
setEllipseTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Ellipse.void
setEllipseTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Ellipse.void
setEllipseX(java.lang.Double x, int ROIIndex, int shapeIndex)
Set the X property of Ellipse.void
setEllipseY(java.lang.Double y, int ROIIndex, int shapeIndex)
Set the Y property of Ellipse.void
setExperimentDescription(java.lang.String description, int experimentIndex)
Set the Description property of Experiment.void
setExperimenterAnnotationRef(java.lang.String annotation, int experimenterIndex, int annotationRefIndex)
Set the AnnotationRef property of Experimenter.void
setExperimenterEmail(java.lang.String email, int experimenterIndex)
Set the Email property of Experimenter.void
setExperimenterFirstName(java.lang.String firstName, int experimenterIndex)
Set the FirstName property of Experimenter.void
setExperimenterGroupAnnotationRef(java.lang.String annotation, int experimenterGroupIndex, int annotationRefIndex)
Set the AnnotationRef property of ExperimenterGroup.void
setExperimenterGroupDescription(java.lang.String description, int experimenterGroupIndex)
Set the Description property of ExperimenterGroup.void
setExperimenterGroupExperimenterRef(java.lang.String experimenter, int experimenterGroupIndex, int experimenterRefIndex)
Set the ExperimenterRef property of ExperimenterGroup.void
setExperimenterGroupID(java.lang.String id, int experimenterGroupIndex)
Set the ID property of ExperimenterGroup.void
setExperimenterGroupLeader(java.lang.String leader, int experimenterGroupIndex, int leaderIndex)
Set the Leader property of ExperimenterGroup.void
setExperimenterGroupName(java.lang.String name, int experimenterGroupIndex)
Set the Name property of ExperimenterGroup.void
setExperimenterID(java.lang.String id, int experimenterIndex)
Set the ID property of Experimenter.void
setExperimenterInstitution(java.lang.String institution, int experimenterIndex)
Set the Institution property of Experimenter.void
setExperimenterLastName(java.lang.String lastName, int experimenterIndex)
Set the LastName property of Experimenter.void
setExperimenterMiddleName(java.lang.String middleName, int experimenterIndex)
Set the MiddleName property of Experimenter.void
setExperimenterUserName(java.lang.String userName, int experimenterIndex)
Set the UserName property of Experimenter.void
setExperimentExperimenterRef(java.lang.String experimenter, int experimentIndex)
Set the ExperimenterRef property of Experiment.void
setExperimentID(java.lang.String id, int experimentIndex)
Set the ID property of Experiment.void
setExperimentType(ExperimentType type, int experimentIndex)
Set the Type property of Experiment.void
setFilamentAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Set the AnnotationRef property of Filament.void
setFilamentID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
Set the ID property of Filament.void
setFilamentLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
Set the LotNumber property of Filament.void
setFilamentManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
Set the Manufacturer property of Filament.void
setFilamentModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
Set the Model property of Filament.void
setFilamentPower(Power power, int instrumentIndex, int lightSourceIndex)
Set the Power property of Filament.void
setFilamentSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
Set the SerialNumber property of Filament.void
setFilamentType(FilamentType type, int instrumentIndex, int lightSourceIndex)
Set the Type property of Filament.void
setFileAnnotationAnnotationRef(java.lang.String annotation, int fileAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of FileAnnotation.void
setFileAnnotationAnnotator(java.lang.String annotator, int fileAnnotationIndex)
Set the Annotator property of FileAnnotation.void
setFileAnnotationDescription(java.lang.String description, int fileAnnotationIndex)
Set the Description property of FileAnnotation.void
setFileAnnotationID(java.lang.String id, int fileAnnotationIndex)
Set the ID property of FileAnnotation.void
setFileAnnotationNamespace(java.lang.String namespace, int fileAnnotationIndex)
Set the Namespace property of FileAnnotation.void
setFilterAnnotationRef(java.lang.String annotation, int instrumentIndex, int filterIndex, int annotationRefIndex)
Set the AnnotationRef property of Filter.void
setFilterFilterWheel(java.lang.String filterWheel, int instrumentIndex, int filterIndex)
Set the FilterWheel property of Filter.void
setFilterID(java.lang.String id, int instrumentIndex, int filterIndex)
Set the ID property of Filter.void
setFilterLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterIndex)
Set the LotNumber property of Filter.void
setFilterManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterIndex)
Set the Manufacturer property of Filter.void
setFilterModel(java.lang.String model, int instrumentIndex, int filterIndex)
Set the Model property of Filter.void
setFilterSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterIndex)
Set the SerialNumber property of Filter.void
setFilterSetDichroicRef(java.lang.String dichroic, int instrumentIndex, int filterSetIndex)
Set the DichroicRef property of FilterSet.void
setFilterSetEmissionFilterRef(java.lang.String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)
Set the EmissionFilterRef property of FilterSet.void
setFilterSetExcitationFilterRef(java.lang.String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)
Set the ExcitationFilterRef property of FilterSet.void
setFilterSetID(java.lang.String id, int instrumentIndex, int filterSetIndex)
Set the ID property of FilterSet.void
setFilterSetLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterSetIndex)
Set the LotNumber property of FilterSet.void
setFilterSetManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterSetIndex)
Set the Manufacturer property of FilterSet.void
setFilterSetModel(java.lang.String model, int instrumentIndex, int filterSetIndex)
Set the Model property of FilterSet.void
setFilterSetSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterSetIndex)
Set the SerialNumber property of FilterSet.void
setFilterType(FilterType type, int instrumentIndex, int filterIndex)
Set the Type property of Filter.void
setFolderAnnotationRef(java.lang.String annotation, int folderIndex, int annotationRefIndex)
Set the AnnotationRef property of Folder.void
setFolderDescription(java.lang.String description, int folderIndex)
Set the Description property of Folder.void
setFolderFolderRef(java.lang.String folder, int folderIndex, int folderRefIndex)
Set the FolderRef property of Folder.void
setFolderID(java.lang.String id, int folderIndex)
Set the ID property of Folder.void
setFolderImageRef(java.lang.String image, int folderIndex, int imageRefIndex)
Set the ImageRef property of Folder.void
setFolderName(java.lang.String name, int folderIndex)
Set the Name property of Folder.void
setFolderROIRef(java.lang.String roi, int folderIndex, int ROIRefIndex)
Set the ROIRef property of Folder.void
setGenericExcitationSourceAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Set the AnnotationRef property of GenericExcitationSource.void
setGenericExcitationSourceID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
Set the ID property of GenericExcitationSource.void
setGenericExcitationSourceLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
Set the LotNumber property of GenericExcitationSource.void
setGenericExcitationSourceManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
Set the Manufacturer property of GenericExcitationSource.void
setGenericExcitationSourceMap(java.util.List<MapPair> map, int instrumentIndex, int lightSourceIndex)
Sets the Map value associated with this generic light sourcevoid
setGenericExcitationSourceModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
Set the Model property of GenericExcitationSource.void
setGenericExcitationSourcePower(Power power, int instrumentIndex, int lightSourceIndex)
Set the Power property of GenericExcitationSource.void
setGenericExcitationSourceSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
Set the SerialNumber property of GenericExcitationSource.void
setImageAcquisitionDate(Timestamp acquisitionDate, int imageIndex)
Set the AcquisitionDate property of Image.void
setImageAnnotationRef(java.lang.String annotation, int imageIndex, int annotationRefIndex)
Set the AnnotationRef property of Image.void
setImageDescription(java.lang.String description, int imageIndex)
Set the Description property of Image.void
setImageExperimenterGroupRef(java.lang.String experimenterGroup, int imageIndex)
Set the ExperimenterGroupRef property of Image.void
setImageExperimenterRef(java.lang.String experimenter, int imageIndex)
Set the ExperimenterRef property of Image.void
setImageExperimentRef(java.lang.String experiment, int imageIndex)
Set the ExperimentRef property of Image.void
setImageID(java.lang.String id, int imageIndex)
Set the ID property of Image.void
setImageInstrumentRef(java.lang.String instrument, int imageIndex)
Set the InstrumentRef property of Image.void
setImageMicrobeamManipulationRef(java.lang.String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex)
Set the MicrobeamManipulationRef property of Image.void
setImageName(java.lang.String name, int imageIndex)
Set the Name property of Image.void
setImageROIRef(java.lang.String roi, int imageIndex, int ROIRefIndex)
Set the ROIRef property of Image.void
setImagingEnvironmentAirPressure(Pressure airPressure, int imageIndex)
Set the AirPressure property of ImagingEnvironment.void
setImagingEnvironmentCO2Percent(PercentFraction co2Percent, int imageIndex)
Set the CO2Percent property of ImagingEnvironment.void
setImagingEnvironmentHumidity(PercentFraction humidity, int imageIndex)
Set the Humidity property of ImagingEnvironment.void
setImagingEnvironmentMap(java.util.List<MapPair> map, int imageIndex)
Sets the Map value associated with this imaging environmentvoid
setImagingEnvironmentTemperature(Temperature temperature, int imageIndex)
Set the Temperature property of ImagingEnvironment.void
setInstrumentAnnotationRef(java.lang.String annotation, int instrumentIndex, int annotationRefIndex)
Set the AnnotationRef property of Instrument.void
setInstrumentID(java.lang.String id, int instrumentIndex)
Set the ID property of Instrument.void
setLabelAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Label.void
setLabelFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Label.void
setLabelFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Label.void
setLabelFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Label.void
setLabelFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Label.void
setLabelFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Label.void
setLabelID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Label.void
setLabelLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Label.void
setLabelStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Label.void
setLabelStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Label.void
setLabelStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Label.void
setLabelText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Label.void
setLabelTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Label.void
setLabelTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Label.void
setLabelTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Label.void
setLabelTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Label.void
setLabelX(java.lang.Double x, int ROIIndex, int shapeIndex)
Set the X property of Label.void
setLabelY(java.lang.Double y, int ROIIndex, int shapeIndex)
Set the Y property of Label.void
setLaserAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Set the AnnotationRef property of Laser.void
setLaserFrequencyMultiplication(PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex)
Set the FrequencyMultiplication property of Laser.void
setLaserID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
Set the ID property of Laser.void
setLaserLaserMedium(LaserMedium laserMedium, int instrumentIndex, int lightSourceIndex)
Set the LaserMedium property of Laser.void
setLaserLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
Set the LotNumber property of Laser.void
setLaserManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
Set the Manufacturer property of Laser.void
setLaserModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
Set the Model property of Laser.void
setLaserPockelCell(java.lang.Boolean pockelCell, int instrumentIndex, int lightSourceIndex)
Set the PockelCell property of Laser.void
setLaserPower(Power power, int instrumentIndex, int lightSourceIndex)
Set the Power property of Laser.void
setLaserPulse(Pulse pulse, int instrumentIndex, int lightSourceIndex)
Set the Pulse property of Laser.void
setLaserPump(java.lang.String pump, int instrumentIndex, int lightSourceIndex)
Set the Pump property of Laser.void
setLaserRepetitionRate(Frequency repetitionRate, int instrumentIndex, int lightSourceIndex)
Set the RepetitionRate property of Laser.void
setLaserSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
Set the SerialNumber property of Laser.void
setLaserTuneable(java.lang.Boolean tuneable, int instrumentIndex, int lightSourceIndex)
Set the Tuneable property of Laser.void
setLaserType(LaserType type, int instrumentIndex, int lightSourceIndex)
Set the Type property of Laser.void
setLaserWavelength(Length wavelength, int instrumentIndex, int lightSourceIndex)
Set the Wavelength property of Laser.void
setLightEmittingDiodeAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)
Set the AnnotationRef property of LightEmittingDiode.void
setLightEmittingDiodeID(java.lang.String id, int instrumentIndex, int lightSourceIndex)
Set the ID property of LightEmittingDiode.void
setLightEmittingDiodeLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)
Set the LotNumber property of LightEmittingDiode.void
setLightEmittingDiodeManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)
Set the Manufacturer property of LightEmittingDiode.void
setLightEmittingDiodeModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)
Set the Model property of LightEmittingDiode.void
setLightEmittingDiodePower(Power power, int instrumentIndex, int lightSourceIndex)
Set the Power property of LightEmittingDiode.void
setLightEmittingDiodeSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)
Set the SerialNumber property of LightEmittingDiode.void
setLightPathAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)
Set the AnnotationRef property of LightPath.void
setLightPathDichroicRef(java.lang.String dichroic, int imageIndex, int channelIndex)
Set the DichroicRef property of LightPath.void
setLightPathEmissionFilterRef(java.lang.String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex)
Set the EmissionFilterRef property of LightPath.void
setLightPathExcitationFilterRef(java.lang.String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex)
Set the ExcitationFilterRef property of LightPath.void
setLineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Line.void
setLineFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Line.void
setLineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Line.void
setLineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Line.void
setLineFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Line.void
setLineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Line.void
setLineID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Line.void
setLineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Line.void
setLineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex)
Set the MarkerEnd property of Line.void
setLineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex)
Set the MarkerStart property of Line.void
setLineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Line.void
setLineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Line.void
setLineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Line.void
setLineText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Line.void
setLineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Line.void
setLineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Line.void
setLineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Line.void
setLineTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Line.void
setLineX1(java.lang.Double x1, int ROIIndex, int shapeIndex)
Set the X1 property of Line.void
setLineX2(java.lang.Double x2, int ROIIndex, int shapeIndex)
Set the X2 property of Line.void
setLineY1(java.lang.Double y1, int ROIIndex, int shapeIndex)
Set the Y1 property of Line.void
setLineY2(java.lang.Double y2, int ROIIndex, int shapeIndex)
Set the Y2 property of Line.void
setListAnnotationAnnotationRef(java.lang.String annotation, int listAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of ListAnnotation.void
setListAnnotationAnnotator(java.lang.String annotator, int listAnnotationIndex)
Set the Annotator property of ListAnnotation.void
setListAnnotationDescription(java.lang.String description, int listAnnotationIndex)
Set the Description property of ListAnnotation.void
setListAnnotationID(java.lang.String id, int listAnnotationIndex)
Set the ID property of ListAnnotation.void
setListAnnotationNamespace(java.lang.String namespace, int listAnnotationIndex)
Set the Namespace property of ListAnnotation.void
setLongAnnotationAnnotationRef(java.lang.String annotation, int longAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of LongAnnotation.void
setLongAnnotationAnnotator(java.lang.String annotator, int longAnnotationIndex)
Set the Annotator property of LongAnnotation.void
setLongAnnotationDescription(java.lang.String description, int longAnnotationIndex)
Set the Description property of LongAnnotation.void
setLongAnnotationID(java.lang.String id, int longAnnotationIndex)
Set the ID property of LongAnnotation.void
setLongAnnotationNamespace(java.lang.String namespace, int longAnnotationIndex)
Set the Namespace property of LongAnnotation.void
setLongAnnotationValue(java.lang.Long value, int longAnnotationIndex)
Set the Value property of LongAnnotation.void
setMapAnnotationAnnotationRef(java.lang.String annotation, int mapAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of MapAnnotation.void
setMapAnnotationAnnotator(java.lang.String annotator, int mapAnnotationIndex)
Set the Annotator property of MapAnnotation.void
setMapAnnotationDescription(java.lang.String description, int mapAnnotationIndex)
Set the Description property of MapAnnotation.void
setMapAnnotationID(java.lang.String id, int mapAnnotationIndex)
Set the ID property of MapAnnotation.void
setMapAnnotationNamespace(java.lang.String namespace, int mapAnnotationIndex)
Set the Namespace property of MapAnnotation.void
setMapAnnotationValue(java.util.List<MapPair> value, int mapAnnotationIndex)
Sets the Map value associated with this annotationvoid
setMaskAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Mask.void
setMaskBinData(byte[] base64Binary, int ROIIndex, int shapeIndex)
Set the Base64Binary property of BinData.void
setMaskBinDataBigEndian(java.lang.Boolean bigEndian, int ROIIndex, int shapeIndex)
Set the BigEndian property of BinData.void
setMaskBinDataCompression(Compression compression, int ROIIndex, int shapeIndex)
Set the Compression property of BinData.void
setMaskBinDataLength(NonNegativeLong length, int ROIIndex, int shapeIndex)
Set the Length property of BinData.void
setMaskFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Mask.void
setMaskFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Mask.void
setMaskFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Mask.void
setMaskFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Mask.void
setMaskFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Mask.void
setMaskHeight(java.lang.Double height, int ROIIndex, int shapeIndex)
Set the Height property of Mask.void
setMaskID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Mask.void
setMaskLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Mask.void
setMaskStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Mask.void
setMaskStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Mask.void
setMaskStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Mask.void
setMaskText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Mask.void
setMaskTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Mask.void
setMaskTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Mask.void
setMaskTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Mask.void
setMaskTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Mask.void
setMaskWidth(java.lang.Double width, int ROIIndex, int shapeIndex)
Set the Width property of Mask.void
setMaskX(java.lang.Double x, int ROIIndex, int shapeIndex)
Set the X property of Mask.void
setMaskY(java.lang.Double y, int ROIIndex, int shapeIndex)
Set the Y property of Mask.void
setMicrobeamManipulationDescription(java.lang.String description, int experimentIndex, int microbeamManipulationIndex)
Set the Description property of MicrobeamManipulation.void
setMicrobeamManipulationExperimenterRef(java.lang.String experimenter, int experimentIndex, int microbeamManipulationIndex)
Set the ExperimenterRef property of MicrobeamManipulation.void
setMicrobeamManipulationID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex)
Set the ID property of MicrobeamManipulation.void
setMicrobeamManipulationLightSourceSettingsAttenuation(PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
Set the Attenuation property of LightSourceSettings.void
setMicrobeamManipulationLightSourceSettingsID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
Set the ID property of LightSourceSettings.void
setMicrobeamManipulationLightSourceSettingsWavelength(Length wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)
Set the Wavelength property of LightSourceSettings.void
setMicrobeamManipulationROIRef(java.lang.String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)
Set the ROIRef property of MicrobeamManipulation.void
setMicrobeamManipulationType(MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex)
Set the Type property of MicrobeamManipulation.void
setMicroscopeLotNumber(java.lang.String lotNumber, int instrumentIndex)
Set the LotNumber property of Microscope.void
setMicroscopeManufacturer(java.lang.String manufacturer, int instrumentIndex)
Set the Manufacturer property of Microscope.void
setMicroscopeModel(java.lang.String model, int instrumentIndex)
Set the Model property of Microscope.void
setMicroscopeSerialNumber(java.lang.String serialNumber, int instrumentIndex)
Set the SerialNumber property of Microscope.void
setMicroscopeType(MicroscopeType type, int instrumentIndex)
Set the Type property of Microscope.void
setObjectiveAnnotationRef(java.lang.String annotation, int instrumentIndex, int objectiveIndex, int annotationRefIndex)
Set the AnnotationRef property of Objective.void
setObjectiveCalibratedMagnification(java.lang.Double calibratedMagnification, int instrumentIndex, int objectiveIndex)
Set the CalibratedMagnification property of Objective.void
setObjectiveCorrection(Correction correction, int instrumentIndex, int objectiveIndex)
Set the Correction property of Objective.void
setObjectiveID(java.lang.String id, int instrumentIndex, int objectiveIndex)
Set the ID property of Objective.void
setObjectiveImmersion(Immersion immersion, int instrumentIndex, int objectiveIndex)
Set the Immersion property of Objective.void
setObjectiveIris(java.lang.Boolean iris, int instrumentIndex, int objectiveIndex)
Set the Iris property of Objective.void
setObjectiveLensNA(java.lang.Double lensNA, int instrumentIndex, int objectiveIndex)
Set the LensNA property of Objective.void
setObjectiveLotNumber(java.lang.String lotNumber, int instrumentIndex, int objectiveIndex)
Set the LotNumber property of Objective.void
setObjectiveManufacturer(java.lang.String manufacturer, int instrumentIndex, int objectiveIndex)
Set the Manufacturer property of Objective.void
setObjectiveModel(java.lang.String model, int instrumentIndex, int objectiveIndex)
Set the Model property of Objective.void
setObjectiveNominalMagnification(java.lang.Double nominalMagnification, int instrumentIndex, int objectiveIndex)
Set the NominalMagnification property of Objective.void
setObjectiveSerialNumber(java.lang.String serialNumber, int instrumentIndex, int objectiveIndex)
Set the SerialNumber property of Objective.void
setObjectiveSettingsCorrectionCollar(java.lang.Double correctionCollar, int imageIndex)
Set the CorrectionCollar property of ObjectiveSettings.void
setObjectiveSettingsID(java.lang.String id, int imageIndex)
Set the ID property of ObjectiveSettings.void
setObjectiveSettingsMedium(Medium medium, int imageIndex)
Set the Medium property of ObjectiveSettings.void
setObjectiveSettingsRefractiveIndex(java.lang.Double refractiveIndex, int imageIndex)
Set the RefractiveIndex property of ObjectiveSettings.void
setObjectiveWorkingDistance(Length workingDistance, int instrumentIndex, int objectiveIndex)
Set the WorkingDistance property of Objective.void
setPixelsBigEndian(java.lang.Boolean bigEndian, int imageIndex)
Set the BigEndian property of Pixels.void
setPixelsBinData(byte[] base64Binary, int imageIndex, int binDataIndex)
Set the Base64Binary property of BinData.void
setPixelsBinDataBigEndian(java.lang.Boolean bigEndian, int imageIndex, int binDataIndex)
Set the BigEndian property of BinData.void
setPixelsBinDataCompression(Compression compression, int imageIndex, int binDataIndex)
Set the Compression property of BinData.void
setPixelsBinDataLength(NonNegativeLong length, int imageIndex, int binDataIndex)
Set the Length property of BinData.void
setPixelsDimensionOrder(DimensionOrder dimensionOrder, int imageIndex)
Set the DimensionOrder property of Pixels.void
setPixelsID(java.lang.String id, int imageIndex)
Set the ID property of Pixels.void
setPixelsInterleaved(java.lang.Boolean interleaved, int imageIndex)
Set the Interleaved property of Pixels.void
setPixelsPhysicalSizeX(Length physicalSizeX, int imageIndex)
Set the PhysicalSizeX property of Pixels.void
setPixelsPhysicalSizeY(Length physicalSizeY, int imageIndex)
Set the PhysicalSizeY property of Pixels.void
setPixelsPhysicalSizeZ(Length physicalSizeZ, int imageIndex)
Set the PhysicalSizeZ property of Pixels.void
setPixelsSignificantBits(PositiveInteger significantBits, int imageIndex)
Set the SignificantBits property of Pixels.void
setPixelsSizeC(PositiveInteger sizeC, int imageIndex)
Set the SizeC property of Pixels.void
setPixelsSizeT(PositiveInteger sizeT, int imageIndex)
Set the SizeT property of Pixels.void
setPixelsSizeX(PositiveInteger sizeX, int imageIndex)
Set the SizeX property of Pixels.void
setPixelsSizeY(PositiveInteger sizeY, int imageIndex)
Set the SizeY property of Pixels.void
setPixelsSizeZ(PositiveInteger sizeZ, int imageIndex)
Set the SizeZ property of Pixels.void
setPixelsTimeIncrement(Time timeIncrement, int imageIndex)
Set the TimeIncrement property of Pixels.void
setPixelsType(PixelType type, int imageIndex)
Set the Type property of Pixels.void
setPlaneAnnotationRef(java.lang.String annotation, int imageIndex, int planeIndex, int annotationRefIndex)
Set the AnnotationRef property of Plane.void
setPlaneDeltaT(Time deltaT, int imageIndex, int planeIndex)
Set the DeltaT property of Plane.void
setPlaneExposureTime(Time exposureTime, int imageIndex, int planeIndex)
Set the ExposureTime property of Plane.void
setPlaneHashSHA1(java.lang.String hashSHA1, int imageIndex, int planeIndex)
Set the HashSHA1 property of Plane.void
setPlanePositionX(Length positionX, int imageIndex, int planeIndex)
Set the PositionX property of Plane.void
setPlanePositionY(Length positionY, int imageIndex, int planeIndex)
Set the PositionY property of Plane.void
setPlanePositionZ(Length positionZ, int imageIndex, int planeIndex)
Set the PositionZ property of Plane.void
setPlaneTheC(NonNegativeInteger theC, int imageIndex, int planeIndex)
Set the TheC property of Plane.void
setPlaneTheT(NonNegativeInteger theT, int imageIndex, int planeIndex)
Set the TheT property of Plane.void
setPlaneTheZ(NonNegativeInteger theZ, int imageIndex, int planeIndex)
Set the TheZ property of Plane.void
setPlateAcquisitionAnnotationRef(java.lang.String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)
Set the AnnotationRef property of PlateAcquisition.void
setPlateAcquisitionDescription(java.lang.String description, int plateIndex, int plateAcquisitionIndex)
Set the Description property of PlateAcquisition.void
setPlateAcquisitionEndTime(Timestamp endTime, int plateIndex, int plateAcquisitionIndex)
Set the EndTime property of PlateAcquisition.void
setPlateAcquisitionID(java.lang.String id, int plateIndex, int plateAcquisitionIndex)
Set the ID property of PlateAcquisition.void
setPlateAcquisitionMaximumFieldCount(PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex)
Set the MaximumFieldCount property of PlateAcquisition.void
setPlateAcquisitionName(java.lang.String name, int plateIndex, int plateAcquisitionIndex)
Set the Name property of PlateAcquisition.void
setPlateAcquisitionStartTime(Timestamp startTime, int plateIndex, int plateAcquisitionIndex)
Set the StartTime property of PlateAcquisition.void
setPlateAcquisitionWellSampleRef(java.lang.String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)
Set the WellSampleRef property of PlateAcquisition.void
setPlateAnnotationRef(java.lang.String annotation, int plateIndex, int annotationRefIndex)
Set the AnnotationRef property of Plate.void
setPlateColumnNamingConvention(NamingConvention columnNamingConvention, int plateIndex)
Set the ColumnNamingConvention property of Plate.void
setPlateColumns(PositiveInteger columns, int plateIndex)
Set the Columns property of Plate.void
setPlateDescription(java.lang.String description, int plateIndex)
Set the Description property of Plate.void
setPlateExternalIdentifier(java.lang.String externalIdentifier, int plateIndex)
Set the ExternalIdentifier property of Plate.void
setPlateFieldIndex(NonNegativeInteger fieldIndex, int plateIndex)
Set the FieldIndex property of Plate.void
setPlateID(java.lang.String id, int plateIndex)
Set the ID property of Plate.void
setPlateName(java.lang.String name, int plateIndex)
Set the Name property of Plate.void
setPlateRowNamingConvention(NamingConvention rowNamingConvention, int plateIndex)
Set the RowNamingConvention property of Plate.void
setPlateRows(PositiveInteger rows, int plateIndex)
Set the Rows property of Plate.void
setPlateStatus(java.lang.String status, int plateIndex)
Set the Status property of Plate.void
setPlateWellOriginX(Length wellOriginX, int plateIndex)
Set the WellOriginX property of Plate.void
setPlateWellOriginY(Length wellOriginY, int plateIndex)
Set the WellOriginY property of Plate.void
setPointAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Point.void
setPointFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Point.void
setPointFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Point.void
setPointFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Point.void
setPointFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Point.void
setPointFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Point.void
setPointID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Point.void
setPointLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Point.void
setPointStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Point.void
setPointStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Point.void
setPointStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Point.void
setPointText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Point.void
setPointTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Point.void
setPointTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Point.void
setPointTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Point.void
setPointTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Point.void
setPointX(java.lang.Double x, int ROIIndex, int shapeIndex)
Set the X property of Point.void
setPointY(java.lang.Double y, int ROIIndex, int shapeIndex)
Set the Y property of Point.void
setPolygonAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Polygon.void
setPolygonFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Polygon.void
setPolygonFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Polygon.void
setPolygonFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Polygon.void
setPolygonFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Polygon.void
setPolygonFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Polygon.void
setPolygonID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Polygon.void
setPolygonLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Polygon.void
setPolygonPoints(java.lang.String points, int ROIIndex, int shapeIndex)
Set the Points property of Polygon.void
setPolygonStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Polygon.void
setPolygonStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Polygon.void
setPolygonStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Polygon.void
setPolygonText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Polygon.void
setPolygonTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Polygon.void
setPolygonTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Polygon.void
setPolygonTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Polygon.void
setPolygonTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Polygon.void
setPolylineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Polyline.void
setPolylineFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Polyline.void
setPolylineFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Polyline.void
setPolylineFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Polyline.void
setPolylineFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Polyline.void
setPolylineFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Polyline.void
setPolylineID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Polyline.void
setPolylineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Polyline.void
setPolylineMarkerEnd(Marker markerEnd, int ROIIndex, int shapeIndex)
Set the MarkerEnd property of Polyline.void
setPolylineMarkerStart(Marker markerStart, int ROIIndex, int shapeIndex)
Set the MarkerStart property of Polyline.void
setPolylinePoints(java.lang.String points, int ROIIndex, int shapeIndex)
Set the Points property of Polyline.void
setPolylineStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Polyline.void
setPolylineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Polyline.void
setPolylineStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Polyline.void
setPolylineText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Polyline.void
setPolylineTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Polyline.void
setPolylineTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Polyline.void
setPolylineTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Polyline.void
setPolylineTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Polyline.void
setProjectAnnotationRef(java.lang.String annotation, int projectIndex, int annotationRefIndex)
Set the AnnotationRef property of Project.void
setProjectDatasetRef(java.lang.String dataset, int projectIndex, int datasetRefIndex)
Set the DatasetRef property of Project.void
setProjectDescription(java.lang.String description, int projectIndex)
Set the Description property of Project.void
setProjectExperimenterGroupRef(java.lang.String experimenterGroup, int projectIndex)
Set the ExperimenterGroupRef property of Project.void
setProjectExperimenterRef(java.lang.String experimenter, int projectIndex)
Set the ExperimenterRef property of Project.void
setProjectID(java.lang.String id, int projectIndex)
Set the ID property of Project.void
setProjectName(java.lang.String name, int projectIndex)
Set the Name property of Project.void
setReagentAnnotationRef(java.lang.String annotation, int screenIndex, int reagentIndex, int annotationRefIndex)
Set the AnnotationRef property of Reagent.void
setReagentDescription(java.lang.String description, int screenIndex, int reagentIndex)
Set the Description property of Reagent.void
setReagentID(java.lang.String id, int screenIndex, int reagentIndex)
Set the ID property of Reagent.void
setReagentName(java.lang.String name, int screenIndex, int reagentIndex)
Set the Name property of Reagent.void
setReagentReagentIdentifier(java.lang.String reagentIdentifier, int screenIndex, int reagentIndex)
Set the ReagentIdentifier property of Reagent.void
setRectangleAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)
Set the AnnotationRef property of Rectangle.void
setRectangleFillColor(Color fillColor, int ROIIndex, int shapeIndex)
Set the FillColor property of Rectangle.void
setRectangleFillRule(FillRule fillRule, int ROIIndex, int shapeIndex)
Set the FillRule property of Rectangle.void
setRectangleFontFamily(FontFamily fontFamily, int ROIIndex, int shapeIndex)
Set the FontFamily property of Rectangle.void
setRectangleFontSize(Length fontSize, int ROIIndex, int shapeIndex)
Set the FontSize property of Rectangle.void
setRectangleFontStyle(FontStyle fontStyle, int ROIIndex, int shapeIndex)
Set the FontStyle property of Rectangle.void
setRectangleHeight(java.lang.Double height, int ROIIndex, int shapeIndex)
Set the Height property of Rectangle.void
setRectangleID(java.lang.String id, int ROIIndex, int shapeIndex)
Set the ID property of Rectangle.void
setRectangleLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)
Set the Locked property of Rectangle.void
setRectangleStrokeColor(Color strokeColor, int ROIIndex, int shapeIndex)
Set the StrokeColor property of Rectangle.void
setRectangleStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)
Set the StrokeDashArray property of Rectangle.void
setRectangleStrokeWidth(Length strokeWidth, int ROIIndex, int shapeIndex)
Set the StrokeWidth property of Rectangle.void
setRectangleText(java.lang.String text, int ROIIndex, int shapeIndex)
Set the Text property of Rectangle.void
setRectangleTheC(NonNegativeInteger theC, int ROIIndex, int shapeIndex)
Set the TheC property of Rectangle.void
setRectangleTheT(NonNegativeInteger theT, int ROIIndex, int shapeIndex)
Set the TheT property of Rectangle.void
setRectangleTheZ(NonNegativeInteger theZ, int ROIIndex, int shapeIndex)
Set the TheZ property of Rectangle.void
setRectangleTransform(AffineTransform transform, int ROIIndex, int shapeIndex)
Set the Transform property of Rectangle.void
setRectangleWidth(java.lang.Double width, int ROIIndex, int shapeIndex)
Set the Width property of Rectangle.void
setRectangleX(java.lang.Double x, int ROIIndex, int shapeIndex)
Set the X property of Rectangle.void
setRectangleY(java.lang.Double y, int ROIIndex, int shapeIndex)
Set the Y property of Rectangle.void
setRightsRightsHeld(java.lang.String rightsHeld)
Set the RightsHeld property of Rights.void
setRightsRightsHolder(java.lang.String rightsHolder)
Set the RightsHolder property of Rights.void
setROIAnnotationRef(java.lang.String annotation, int ROIIndex, int annotationRefIndex)
Set the AnnotationRef property of ROI.void
setROIDescription(java.lang.String description, int ROIIndex)
Set the Description property of ROI.void
setROIID(java.lang.String id, int ROIIndex)
Set the ID property of ROI.void
setROIName(java.lang.String name, int ROIIndex)
Set the Name property of ROI.void
setRoot(MetadataRoot root)
Set the root node of the metadata.void
setScreenAnnotationRef(java.lang.String annotation, int screenIndex, int annotationRefIndex)
Set the AnnotationRef property of Screen.void
setScreenDescription(java.lang.String description, int screenIndex)
Set the Description property of Screen.void
setScreenID(java.lang.String id, int screenIndex)
Set the ID property of Screen.void
setScreenName(java.lang.String name, int screenIndex)
Set the Name property of Screen.void
setScreenPlateRef(java.lang.String plate, int screenIndex, int plateRefIndex)
Set the PlateRef property of Screen.void
setScreenProtocolDescription(java.lang.String protocolDescription, int screenIndex)
Set the ProtocolDescription property of Screen.void
setScreenProtocolIdentifier(java.lang.String protocolIdentifier, int screenIndex)
Set the ProtocolIdentifier property of Screen.void
setScreenReagentSetDescription(java.lang.String reagentSetDescription, int screenIndex)
Set the ReagentSetDescription property of Screen.void
setScreenReagentSetIdentifier(java.lang.String reagentSetIdentifier, int screenIndex)
Set the ReagentSetIdentifier property of Screen.void
setScreenType(java.lang.String type, int screenIndex)
Set the Type property of Screen.void
setStageLabelName(java.lang.String name, int imageIndex)
Set the Name property of StageLabel.void
setStageLabelX(Length x, int imageIndex)
Set the X property of StageLabel.void
setStageLabelY(Length y, int imageIndex)
Set the Y property of StageLabel.void
setStageLabelZ(Length z, int imageIndex)
Set the Z property of StageLabel.void
setTagAnnotationAnnotationRef(java.lang.String annotation, int tagAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of TagAnnotation.void
setTagAnnotationAnnotator(java.lang.String annotator, int tagAnnotationIndex)
Set the Annotator property of TagAnnotation.void
setTagAnnotationDescription(java.lang.String description, int tagAnnotationIndex)
Set the Description property of TagAnnotation.void
setTagAnnotationID(java.lang.String id, int tagAnnotationIndex)
Set the ID property of TagAnnotation.void
setTagAnnotationNamespace(java.lang.String namespace, int tagAnnotationIndex)
Set the Namespace property of TagAnnotation.void
setTagAnnotationValue(java.lang.String value, int tagAnnotationIndex)
Set the Value property of TagAnnotation.void
setTermAnnotationAnnotationRef(java.lang.String annotation, int termAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of TermAnnotation.void
setTermAnnotationAnnotator(java.lang.String annotator, int termAnnotationIndex)
Set the Annotator property of TermAnnotation.void
setTermAnnotationDescription(java.lang.String description, int termAnnotationIndex)
Set the Description property of TermAnnotation.void
setTermAnnotationID(java.lang.String id, int termAnnotationIndex)
Set the ID property of TermAnnotation.void
setTermAnnotationNamespace(java.lang.String namespace, int termAnnotationIndex)
Set the Namespace property of TermAnnotation.void
setTermAnnotationValue(java.lang.String value, int termAnnotationIndex)
Set the Value property of TermAnnotation.void
setTiffDataFirstC(NonNegativeInteger firstC, int imageIndex, int tiffDataIndex)
Set the FirstC property of TiffData.void
setTiffDataFirstT(NonNegativeInteger firstT, int imageIndex, int tiffDataIndex)
Set the FirstT property of TiffData.void
setTiffDataFirstZ(NonNegativeInteger firstZ, int imageIndex, int tiffDataIndex)
Set the FirstZ property of TiffData.void
setTiffDataIFD(NonNegativeInteger ifd, int imageIndex, int tiffDataIndex)
Set the IFD property of TiffData.void
setTiffDataPlaneCount(NonNegativeInteger planeCount, int imageIndex, int tiffDataIndex)
Set the PlaneCount property of TiffData.void
setTimestampAnnotationAnnotationRef(java.lang.String annotation, int timestampAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of TimestampAnnotation.void
setTimestampAnnotationAnnotator(java.lang.String annotator, int timestampAnnotationIndex)
Set the Annotator property of TimestampAnnotation.void
setTimestampAnnotationDescription(java.lang.String description, int timestampAnnotationIndex)
Set the Description property of TimestampAnnotation.void
setTimestampAnnotationID(java.lang.String id, int timestampAnnotationIndex)
Set the ID property of TimestampAnnotation.void
setTimestampAnnotationNamespace(java.lang.String namespace, int timestampAnnotationIndex)
Set the Namespace property of TimestampAnnotation.void
setTimestampAnnotationValue(Timestamp value, int timestampAnnotationIndex)
Set the Value property of TimestampAnnotation.void
setTransmittanceRangeCutIn(Length cutIn, int instrumentIndex, int filterIndex)
Set the CutIn property of TransmittanceRange.void
setTransmittanceRangeCutInTolerance(Length cutInTolerance, int instrumentIndex, int filterIndex)
Set the CutInTolerance property of TransmittanceRange.void
setTransmittanceRangeCutOut(Length cutOut, int instrumentIndex, int filterIndex)
Set the CutOut property of TransmittanceRange.void
setTransmittanceRangeCutOutTolerance(Length cutOutTolerance, int instrumentIndex, int filterIndex)
Set the CutOutTolerance property of TransmittanceRange.void
setTransmittanceRangeTransmittance(PercentFraction transmittance, int instrumentIndex, int filterIndex)
Set the Transmittance property of TransmittanceRange.void
setUUID(java.lang.String uuid)
Sets the UUID associated with this collection of metadata.void
setUUIDFileName(java.lang.String fileName, int imageIndex, int tiffDataIndex)
Set the FileName property of UUID.void
setUUIDValue(java.lang.String value, int imageIndex, int tiffDataIndex)
Set the text value of UUID.void
setWellAnnotationRef(java.lang.String annotation, int plateIndex, int wellIndex, int annotationRefIndex)
Set the AnnotationRef property of Well.void
setWellColor(Color color, int plateIndex, int wellIndex)
Set the Color property of Well.void
setWellColumn(NonNegativeInteger column, int plateIndex, int wellIndex)
Set the Column property of Well.void
setWellExternalDescription(java.lang.String externalDescription, int plateIndex, int wellIndex)
Set the ExternalDescription property of Well.void
setWellExternalIdentifier(java.lang.String externalIdentifier, int plateIndex, int wellIndex)
Set the ExternalIdentifier property of Well.void
setWellID(java.lang.String id, int plateIndex, int wellIndex)
Set the ID property of Well.void
setWellReagentRef(java.lang.String reagent, int plateIndex, int wellIndex)
Set the ReagentRef property of Well.void
setWellRow(NonNegativeInteger row, int plateIndex, int wellIndex)
Set the Row property of Well.void
setWellSampleID(java.lang.String id, int plateIndex, int wellIndex, int wellSampleIndex)
Set the ID property of WellSample.void
setWellSampleImageRef(java.lang.String image, int plateIndex, int wellIndex, int wellSampleIndex)
Set the ImageRef property of WellSample.void
setWellSampleIndex(NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex)
Set the Index property of WellSample.void
setWellSamplePositionX(Length positionX, int plateIndex, int wellIndex, int wellSampleIndex)
Set the PositionX property of WellSample.void
setWellSamplePositionY(Length positionY, int plateIndex, int wellIndex, int wellSampleIndex)
Set the PositionY property of WellSample.void
setWellSampleTimepoint(Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex)
Set the Timepoint property of WellSample.void
setWellType(java.lang.String type, int plateIndex, int wellIndex)
Set the Type property of Well.void
setXMLAnnotationAnnotationRef(java.lang.String annotation, int XMLAnnotationIndex, int annotationRefIndex)
Set the AnnotationRef property of XMLAnnotation.void
setXMLAnnotationAnnotator(java.lang.String annotator, int XMLAnnotationIndex)
Set the Annotator property of XMLAnnotation.void
setXMLAnnotationDescription(java.lang.String description, int XMLAnnotationIndex)
Set the Description property of XMLAnnotation.void
setXMLAnnotationID(java.lang.String id, int XMLAnnotationIndex)
Set the ID property of XMLAnnotation.void
setXMLAnnotationNamespace(java.lang.String namespace, int XMLAnnotationIndex)
Set the Namespace property of XMLAnnotation.void
setXMLAnnotationValue(java.lang.String value, int XMLAnnotationIndex)
Set the Value property of XMLAnnotation.
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Constructor Details
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OMEXMLMetadataImpl
public OMEXMLMetadataImpl()
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Method Details
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createRoot
public void createRoot()Description copied from interface:MetadataStore
Create root node. The action taken here is specific to the concrete metadata implementation. -
getRoot
Description copied from interface:MetadataStore
Get the root node of the metadata. Note that the root node type will be specific to the concrete metadata implementation.- Returns:
- the root node.
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setRoot
Description copied from interface:MetadataStore
Set the root node of the metadata. Note that the root node type will be specific to the concrete metadata implementation. An exception will be thrown if the root node is of an incompatible type.- Parameters:
root
- the root node.
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dumpXML
public java.lang.String dumpXML()Description copied from class:AbstractOMEXMLMetadata
Dumps the given OME-XML DOM tree to a string.- Specified by:
dumpXML
in interfaceOMEXMLMetadata
- Overrides:
dumpXML
in classAbstractOMEXMLMetadata
- Returns:
- OME-XML as a string.
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resolveReferences
public int resolveReferences()Description copied from interface:OMEXMLMetadata
Resolve model object cross-references. -
getBooleanAnnotationAnnotationCount
public int getBooleanAnnotationAnnotationCount(int booleanAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a BooleanAnnotation. This method returns the number of references to the specified BooleanAnnotation held by all model objects.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.- Returns:
- the number of BooleanAnnotation links.
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getCommentAnnotationAnnotationCount
public int getCommentAnnotationAnnotationCount(int commentAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a CommentAnnotation. This method returns the number of references to the specified CommentAnnotation held by all model objects.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.- Returns:
- the number of CommentAnnotation links.
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getDoubleAnnotationAnnotationCount
public int getDoubleAnnotationAnnotationCount(int doubleAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a DoubleAnnotation. This method returns the number of references to the specified DoubleAnnotation held by all model objects.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.- Returns:
- the number of DoubleAnnotation links.
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getFileAnnotationAnnotationCount
public int getFileAnnotationAnnotationCount(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a FileAnnotation. This method returns the number of references to the specified FileAnnotation held by all model objects.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the number of FileAnnotation links.
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getListAnnotationAnnotationCount
public int getListAnnotationAnnotationCount(int listAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a ListAnnotation. This method returns the number of references to the specified ListAnnotation held by all model objects.- Parameters:
listAnnotationIndex
- the ListAnnotation index.- Returns:
- the number of ListAnnotation links.
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getLongAnnotationAnnotationCount
public int getLongAnnotationAnnotationCount(int longAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a LongAnnotation. This method returns the number of references to the specified LongAnnotation held by all model objects.- Parameters:
longAnnotationIndex
- the LongAnnotation index.- Returns:
- the number of LongAnnotation links.
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getMapAnnotationAnnotationCount
public int getMapAnnotationAnnotationCount(int mapAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a MapAnnotation. This method returns the number of references to the specified MapAnnotation held by all model objects.- Parameters:
mapAnnotationIndex
- the MapAnnotation index.- Returns:
- the number of MapAnnotation links.
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getTagAnnotationAnnotationCount
public int getTagAnnotationAnnotationCount(int tagAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a TagAnnotation. This method returns the number of references to the specified TagAnnotation held by all model objects.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.- Returns:
- the number of TagAnnotation links.
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getTermAnnotationAnnotationCount
public int getTermAnnotationAnnotationCount(int termAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a TermAnnotation. This method returns the number of references to the specified TermAnnotation held by all model objects.- Parameters:
termAnnotationIndex
- the TermAnnotation index.- Returns:
- the number of TermAnnotation links.
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getTimestampAnnotationAnnotationCount
public int getTimestampAnnotationAnnotationCount(int timestampAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to a TimestampAnnotation. This method returns the number of references to the specified TimestampAnnotation held by all model objects.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.- Returns:
- the number of TimestampAnnotation links.
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getXMLAnnotationAnnotationCount
public int getXMLAnnotationAnnotationCount(int xmlAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the number of links to an XMLAnnotation. This method returns the number of references to the specified XMLAnnotation held by all model objects.- Parameters:
xmlAnnotationIndex
- the XMLAnnotation index.- Returns:
- the number of XMLAnnotation links.
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getLightSourceType
public java.lang.String getLightSourceType(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the type of a LightSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LightSource type.
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getShapeType
public java.lang.String getShapeType(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the type of a Shape.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Shape type.
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getChannelAnnotationRefCount
public int getChannelAnnotationRefCount(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the number of AnnotationRef elements.
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getDatasetAnnotationRefCount
public int getDatasetAnnotationRefCount(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the number of AnnotationRef elements.
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getDetectorAnnotationRefCount
public int getDetectorAnnotationRefCount(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the number of AnnotationRef elements.
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getDichroicAnnotationRefCount
public int getDichroicAnnotationRefCount(int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.- Returns:
- the number of AnnotationRef elements.
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getExperimenterAnnotationRefCount
public int getExperimenterAnnotationRefCount(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the number of AnnotationRef elements.
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getExperimenterGroupAnnotationRefCount
public int getExperimenterGroupAnnotationRefCount(int experimenterGroupIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.- Returns:
- the number of AnnotationRef elements.
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getFilterAnnotationRefCount
public int getFilterAnnotationRefCount(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the number of AnnotationRef elements.
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getFolderAnnotationRefCount
public int getFolderAnnotationRefCount(int folderIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Folder.- Parameters:
folderIndex
- the Folder index.- Returns:
- the number of AnnotationRef elements.
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getImageAnnotationRefCount
public int getImageAnnotationRefCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of AnnotationRef elements.
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getInstrumentAnnotationRefCount
public int getInstrumentAnnotationRefCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Instrument.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of AnnotationRef elements.
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getLightPathAnnotationRefCount
public int getLightPathAnnotationRefCount(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the number of AnnotationRef elements.
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getLightSourceAnnotationRefCount
public int getLightSourceAnnotationRefCount(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in LightSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the number of AnnotationRef elements.
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getObjectiveAnnotationRefCount
public int getObjectiveAnnotationRefCount(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the number of AnnotationRef elements.
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getPlaneAnnotationRefCount
public int getPlaneAnnotationRefCount(int imageIndex, int planeIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the number of AnnotationRef elements.
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getPlateAnnotationRefCount
public int getPlateAnnotationRefCount(int plateIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the number of AnnotationRef elements.
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getPlateAcquisitionAnnotationRefCount
public int getPlateAcquisitionAnnotationRefCount(int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the number of AnnotationRef elements.
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getProjectAnnotationRefCount
public int getProjectAnnotationRefCount(int projectIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Project.- Parameters:
projectIndex
- the Project index.- Returns:
- the number of AnnotationRef elements.
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getROIAnnotationRefCount
public int getROIAnnotationRefCount(int ROIIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in ROI.- Parameters:
ROIIndex
- the ROI index.- Returns:
- the number of AnnotationRef elements.
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getReagentAnnotationRefCount
public int getReagentAnnotationRefCount(int screenIndex, int reagentIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Reagent.- Parameters:
screenIndex
- the Screen index.reagentIndex
- the Reagent index.- Returns:
- the number of AnnotationRef elements.
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getScreenAnnotationRefCount
public int getScreenAnnotationRefCount(int screenIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the number of AnnotationRef elements.
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getShapeAnnotationRefCount
public int getShapeAnnotationRefCount(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Shape.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the number of AnnotationRef elements.
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getWellAnnotationRefCount
public int getWellAnnotationRefCount(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the number of AnnotationRef elements in Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the number of AnnotationRef elements.
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getPixelsBinDataCount
public int getPixelsBinDataCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of BinData elements in Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of BinData elements.
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getBooleanAnnotationCount
public int getBooleanAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of BooleanAnnotation elements.- Returns:
- the number of BooleanAnnotation elements.
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getChannelCount
public int getChannelCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of Channel elements.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of Channel elements.
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getCommentAnnotationCount
public int getCommentAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of CommentAnnotation elements.- Returns:
- the number of CommentAnnotation elements.
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getDatasetCount
public int getDatasetCount()Description copied from interface:MetadataRetrieve
Get the number of Dataset elements.- Returns:
- the number of Dataset elements.
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getDatasetRefCount
public int getDatasetRefCount(int projectIndex)Description copied from interface:MetadataRetrieve
Get the number of DatasetRef elements.- Parameters:
projectIndex
- the Project index.- Returns:
- the number of DatasetRef elements.
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getDetectorCount
public int getDetectorCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of Detector elements.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of Detector elements.
-
getDichroicCount
public int getDichroicCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of Dichroic elements.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of Dichroic elements.
-
getDoubleAnnotationCount
public int getDoubleAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of DoubleAnnotation elements.- Returns:
- the number of DoubleAnnotation elements.
-
getFilterSetEmissionFilterRefCount
public int getFilterSetEmissionFilterRefCount(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the number of EmissionFilterRef elements in FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the number of EmissionFilterRef elements.
-
getLightPathEmissionFilterRefCount
public int getLightPathEmissionFilterRefCount(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the number of EmissionFilterRef elements in LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the number of EmissionFilterRef elements.
-
getFilterSetExcitationFilterRefCount
public int getFilterSetExcitationFilterRefCount(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the number of ExcitationFilterRef elements in FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the number of ExcitationFilterRef elements.
-
getLightPathExcitationFilterRefCount
public int getLightPathExcitationFilterRefCount(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the number of ExcitationFilterRef elements in LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the number of ExcitationFilterRef elements.
-
getExperimentCount
public int getExperimentCount()Description copied from interface:MetadataRetrieve
Get the number of Experiment elements.- Returns:
- the number of Experiment elements.
-
getExperimenterCount
public int getExperimenterCount()Description copied from interface:MetadataRetrieve
Get the number of Experimenter elements.- Returns:
- the number of Experimenter elements.
-
getExperimenterGroupCount
public int getExperimenterGroupCount()Description copied from interface:MetadataRetrieve
Get the number of ExperimenterGroup elements.- Returns:
- the number of ExperimenterGroup elements.
-
getExperimenterGroupExperimenterRefCount
public int getExperimenterGroupExperimenterRefCount(int experimenterGroupIndex)Description copied from interface:MetadataRetrieve
Get the number of ExperimenterRef elements in ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.- Returns:
- the number of ExperimenterRef elements.
-
getFileAnnotationCount
public int getFileAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of FileAnnotation elements.- Returns:
- the number of FileAnnotation elements.
-
getFilterCount
public int getFilterCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of Filter elements.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of Filter elements.
-
getFilterSetCount
public int getFilterSetCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of FilterSet elements.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of FilterSet elements.
-
getFolderCount
public int getFolderCount()Description copied from interface:MetadataRetrieve
Get the number of Folder elements.- Returns:
- the number of Folder elements.
-
getFolderRefCount
public int getFolderRefCount(int folderIndex)Description copied from interface:MetadataRetrieve
Get the number of FolderRef elements.- Parameters:
folderIndex
- the Folder index.- Returns:
- the number of FolderRef elements.
-
getImageCount
public int getImageCount()Description copied from interface:MetadataRetrieve
Get the number of Image elements.- Returns:
- the number of Image elements.
-
getDatasetImageRefCount
public int getDatasetImageRefCount(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the number of ImageRef elements in Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the number of ImageRef elements.
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getFolderImageRefCount
public int getFolderImageRefCount(int folderIndex)Description copied from interface:MetadataRetrieve
Get the number of ImageRef elements in Folder.- Parameters:
folderIndex
- the Folder index.- Returns:
- the number of ImageRef elements.
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getInstrumentCount
public int getInstrumentCount()Description copied from interface:MetadataRetrieve
Get the number of Instrument elements.- Returns:
- the number of Instrument elements.
-
getLeaderCount
public int getLeaderCount(int experimenterGroupIndex)Description copied from interface:MetadataRetrieve
Get the number of Leader elements.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.- Returns:
- the number of Leader elements.
-
getLightSourceCount
public int getLightSourceCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of LightSource elements.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of LightSource elements.
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getMicrobeamManipulationLightSourceSettingsCount
public int getMicrobeamManipulationLightSourceSettingsCount(int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataRetrieve
Get the number of LightSourceSettings elements in MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.- Returns:
- the number of LightSourceSettings elements.
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getListAnnotationCount
public int getListAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of ListAnnotation elements.- Returns:
- the number of ListAnnotation elements.
-
getLongAnnotationCount
public int getLongAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of LongAnnotation elements.- Returns:
- the number of LongAnnotation elements.
-
getMapAnnotationCount
public int getMapAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of MapAnnotation elements.- Returns:
- the number of MapAnnotation elements.
-
getMicrobeamManipulationCount
public int getMicrobeamManipulationCount(int experimentIndex)Description copied from interface:MetadataRetrieve
Get the number of MicrobeamManipulation elements.- Parameters:
experimentIndex
- the Experiment index.- Returns:
- the number of MicrobeamManipulation elements.
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getMicrobeamManipulationRefCount
public int getMicrobeamManipulationRefCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of MicrobeamManipulationRef elements.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of MicrobeamManipulationRef elements.
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getObjectiveCount
public int getObjectiveCount(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the number of Objective elements.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the number of Objective elements.
-
getPlaneCount
public int getPlaneCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of Plane elements.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of Plane elements.
-
getPlateCount
public int getPlateCount()Description copied from interface:MetadataRetrieve
Get the number of Plate elements.- Returns:
- the number of Plate elements.
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getPlateAcquisitionCount
public int getPlateAcquisitionCount(int plateIndex)Description copied from interface:MetadataRetrieve
Get the number of PlateAcquisition elements.- Parameters:
plateIndex
- the Plate index.- Returns:
- the number of PlateAcquisition elements.
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getPlateRefCount
public int getPlateRefCount(int screenIndex)Description copied from interface:MetadataRetrieve
Get the number of PlateRef elements.- Parameters:
screenIndex
- the Screen index.- Returns:
- the number of PlateRef elements.
-
getProjectCount
public int getProjectCount()Description copied from interface:MetadataRetrieve
Get the number of Project elements.- Returns:
- the number of Project elements.
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getROICount
public int getROICount()Description copied from interface:MetadataRetrieve
Get the number of ROI elements.- Returns:
- the number of ROI elements.
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getFolderROIRefCount
public int getFolderROIRefCount(int folderIndex)Description copied from interface:MetadataRetrieve
Get the number of ROIRef elements in Folder.- Parameters:
folderIndex
- the Folder index.- Returns:
- the number of ROIRef elements.
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getImageROIRefCount
public int getImageROIRefCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of ROIRef elements in Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of ROIRef elements.
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getMicrobeamManipulationROIRefCount
public int getMicrobeamManipulationROIRefCount(int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataRetrieve
Get the number of ROIRef elements in MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.- Returns:
- the number of ROIRef elements.
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getReagentCount
public int getReagentCount(int screenIndex)Description copied from interface:MetadataRetrieve
Get the number of Reagent elements.- Parameters:
screenIndex
- the Screen index.- Returns:
- the number of Reagent elements.
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getScreenCount
public int getScreenCount()Description copied from interface:MetadataRetrieve
Get the number of Screen elements.- Returns:
- the number of Screen elements.
-
getShapeCount
public int getShapeCount(int ROIIndex)Description copied from interface:MetadataRetrieve
Get the number of Shape elements.- Parameters:
ROIIndex
- the ROI index.- Returns:
- the number of Shape elements.
-
getTagAnnotationCount
public int getTagAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of TagAnnotation elements.- Returns:
- the number of TagAnnotation elements.
-
getTermAnnotationCount
public int getTermAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of TermAnnotation elements.- Returns:
- the number of TermAnnotation elements.
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getTiffDataCount
public int getTiffDataCount(int imageIndex)Description copied from interface:MetadataRetrieve
Get the number of TiffData elements.- Parameters:
imageIndex
- the Image index.- Returns:
- the number of TiffData elements.
-
getTimestampAnnotationCount
public int getTimestampAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of TimestampAnnotation elements.- Returns:
- the number of TimestampAnnotation elements.
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setUUIDValue
public void setUUIDValue(java.lang.String value, int imageIndex, int tiffDataIndex)Description copied from interface:MetadataStore
Set the text value of UUID.- Parameters:
value
- text value.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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getUUIDValue
public java.lang.String getUUIDValue(int imageIndex, int tiffDataIndex)Description copied from interface:MetadataRetrieve
Get the text value of UUID.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the text value.
-
getWellCount
public int getWellCount(int plateIndex)Description copied from interface:MetadataRetrieve
Get the number of Well elements.- Parameters:
plateIndex
- the Plate index.- Returns:
- the number of Well elements.
-
getWellSampleCount
public int getWellSampleCount(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the number of WellSample elements.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the number of WellSample elements.
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getWellSampleRefCount
public int getWellSampleRefCount(int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataRetrieve
Get the number of WellSampleRef elements.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the number of WellSampleRef elements.
-
getXMLAnnotationCount
public int getXMLAnnotationCount()Description copied from interface:MetadataRetrieve
Get the number of XMLAnnotation elements.- Returns:
- the number of XMLAnnotation elements.
-
getUUID
public java.lang.String getUUID()Gets the UUID associated with this collection of metadata. -
getCreator
public java.lang.String getCreator()Gets the Creator associated with this collection of metadata. -
getMapAnnotationValue
Gets the Map value associated with this annotation- Parameters:
mapAnnotationIndex
- the MapAnnotation index.- Returns:
- the MapAnnotation values.
-
getGenericExcitationSourceMap
public java.util.List<MapPair> getGenericExcitationSourceMap(int instrumentIndex, int lightSourceIndex)Gets the Map value associated with this generic light source- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the MapAnnotation values.
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getImagingEnvironmentMap
Gets the Map value associated with this imaging environment- Parameters:
imageIndex
- the Image index.- Returns:
- the MapAnnotation values.
-
getArcAnnotationRef
public java.lang.String getArcAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getArcID
public java.lang.String getArcID(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the ID property.
-
getArcLotNumber
public java.lang.String getArcLotNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LotNumber property.
-
getArcManufacturer
public java.lang.String getArcManufacturer(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Manufacturer property.
-
getArcModel
public java.lang.String getArcModel(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Model property.
-
getArcPower
Description copied from interface:MetadataRetrieve
Get the Power property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Power property.
-
getArcSerialNumber
public java.lang.String getArcSerialNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the SerialNumber property.
-
getArcType
Description copied from interface:MetadataRetrieve
Get the Type property of Arc.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Type property.
-
getBinaryFileBinData
public byte[] getBinaryFileBinData(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Base64Binary property of BinData.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Base64Binary property.
-
getMaskBinData
public byte[] getMaskBinData(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Base64Binary property of BinData.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Base64Binary property.
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getPixelsBinData
public byte[] getPixelsBinData(int imageIndex, int binDataIndex)Description copied from interface:MetadataRetrieve
Get the Base64Binary property of BinData.- Parameters:
imageIndex
- the Image index.binDataIndex
- the BinData index.- Returns:
- the Base64Binary property.
-
getBinaryFileBinDataBigEndian
public java.lang.Boolean getBinaryFileBinDataBigEndian(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the BigEndian property of BinData.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the BigEndian property.
-
getMaskBinDataBigEndian
public java.lang.Boolean getMaskBinDataBigEndian(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the BigEndian property of BinData.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the BigEndian property.
-
getPixelsBinDataBigEndian
public java.lang.Boolean getPixelsBinDataBigEndian(int imageIndex, int binDataIndex)Description copied from interface:MetadataRetrieve
Get the BigEndian property of BinData.- Parameters:
imageIndex
- the Image index.binDataIndex
- the BinData index.- Returns:
- the BigEndian property.
-
getBinaryFileBinDataCompression
Description copied from interface:MetadataRetrieve
Get the Compression property of BinData.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Compression property.
-
getMaskBinDataCompression
Description copied from interface:MetadataRetrieve
Get the Compression property of BinData.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Compression property.
-
getPixelsBinDataCompression
Description copied from interface:MetadataRetrieve
Get the Compression property of BinData.- Parameters:
imageIndex
- the Image index.binDataIndex
- the BinData index.- Returns:
- the Compression property.
-
getBinaryFileBinDataLength
Description copied from interface:MetadataRetrieve
Get the Length property of BinData.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Length property.
-
getMaskBinDataLength
Description copied from interface:MetadataRetrieve
Get the Length property of BinData.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Length property.
-
getPixelsBinDataLength
Description copied from interface:MetadataRetrieve
Get the Length property of BinData.- Parameters:
imageIndex
- the Image index.binDataIndex
- the BinData index.- Returns:
- the Length property.
-
getBinaryFileFileName
public java.lang.String getBinaryFileFileName(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the FileName property of BinaryFile.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the FileName property.
-
getBinaryFileMIMEType
public java.lang.String getBinaryFileMIMEType(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the MIMEType property of BinaryFile.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the MIMEType property.
-
getBinaryFileSize
Description copied from interface:MetadataRetrieve
Get the Size property of BinaryFile.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Size property.
-
getBinaryOnlyMetadataFile
public java.lang.String getBinaryOnlyMetadataFile()Description copied from interface:MetadataRetrieve
Get the MetadataFile property of BinaryOnly.- Returns:
- the MetadataFile property.
-
getBinaryOnlyUUID
public java.lang.String getBinaryOnlyUUID()Description copied from interface:MetadataRetrieve
Get the UUID property of BinaryOnly.- Returns:
- the UUID property.
-
getBooleanAnnotationAnnotationRef
public java.lang.String getBooleanAnnotationAnnotationRef(int booleanAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of BooleanAnnotation.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getBooleanAnnotationAnnotator
public java.lang.String getBooleanAnnotationAnnotator(int booleanAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of BooleanAnnotation.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.- Returns:
- the Annotator property.
-
getBooleanAnnotationDescription
public java.lang.String getBooleanAnnotationDescription(int booleanAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of BooleanAnnotation.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.- Returns:
- the Description property.
-
getBooleanAnnotationID
public java.lang.String getBooleanAnnotationID(int booleanAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of BooleanAnnotation.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.- Returns:
- the ID property.
-
getBooleanAnnotationNamespace
public java.lang.String getBooleanAnnotationNamespace(int booleanAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of BooleanAnnotation.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.- Returns:
- the Namespace property.
-
getBooleanAnnotationValue
public java.lang.Boolean getBooleanAnnotationValue(int booleanAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of BooleanAnnotation.- Parameters:
booleanAnnotationIndex
- the BooleanAnnotation index.- Returns:
- the Value property.
-
getChannelAcquisitionMode
Description copied from interface:MetadataRetrieve
Get the AcquisitionMode property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the AcquisitionMode property.
-
getChannelAnnotationRef
public java.lang.String getChannelAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getChannelColor
Description copied from interface:MetadataRetrieve
Get the Color property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Color property.
-
getChannelContrastMethod
Description copied from interface:MetadataRetrieve
Get the ContrastMethod property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the ContrastMethod property.
-
getChannelEmissionWavelength
Description copied from interface:MetadataRetrieve
Get the EmissionWavelength property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the EmissionWavelength property.
-
getChannelExcitationWavelength
Description copied from interface:MetadataRetrieve
Get the ExcitationWavelength property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the ExcitationWavelength property.
-
getChannelFilterSetRef
public java.lang.String getChannelFilterSetRef(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the FilterSetRef property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the FilterSetRef property.
-
getChannelFluor
public java.lang.String getChannelFluor(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the Fluor property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Fluor property.
-
getChannelID
public java.lang.String getChannelID(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the ID property.
-
getChannelIlluminationType
Description copied from interface:MetadataRetrieve
Get the IlluminationType property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the IlluminationType property.
-
getChannelNDFilter
public java.lang.Double getChannelNDFilter(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the NDFilter property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the NDFilter property.
-
getChannelName
public java.lang.String getChannelName(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Name property.
-
getChannelPinholeSize
Description copied from interface:MetadataRetrieve
Get the PinholeSize property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the PinholeSize property.
-
getChannelPockelCellSetting
public java.lang.Integer getChannelPockelCellSetting(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the PockelCellSetting property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the PockelCellSetting property.
-
getChannelSamplesPerPixel
Description copied from interface:MetadataRetrieve
Get the SamplesPerPixel property of Channel.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the SamplesPerPixel property.
-
getCommentAnnotationAnnotationRef
public java.lang.String getCommentAnnotationAnnotationRef(int commentAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of CommentAnnotation.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getCommentAnnotationAnnotator
public java.lang.String getCommentAnnotationAnnotator(int commentAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of CommentAnnotation.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.- Returns:
- the Annotator property.
-
getCommentAnnotationDescription
public java.lang.String getCommentAnnotationDescription(int commentAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of CommentAnnotation.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.- Returns:
- the Description property.
-
getCommentAnnotationID
public java.lang.String getCommentAnnotationID(int commentAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of CommentAnnotation.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.- Returns:
- the ID property.
-
getCommentAnnotationNamespace
public java.lang.String getCommentAnnotationNamespace(int commentAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of CommentAnnotation.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.- Returns:
- the Namespace property.
-
getCommentAnnotationValue
public java.lang.String getCommentAnnotationValue(int commentAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of CommentAnnotation.- Parameters:
commentAnnotationIndex
- the CommentAnnotation index.- Returns:
- the Value property.
-
getDatasetAnnotationRef
public java.lang.String getDatasetAnnotationRef(int datasetIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Dataset.- Parameters:
datasetIndex
- the Dataset index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getDatasetDescription
public java.lang.String getDatasetDescription(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the Description property.
-
getDatasetExperimenterGroupRef
public java.lang.String getDatasetExperimenterGroupRef(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterGroupRef property of Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the ExperimenterGroupRef property.
-
getDatasetExperimenterRef
public java.lang.String getDatasetExperimenterRef(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterRef property of Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the ExperimenterRef property.
-
getDatasetID
public java.lang.String getDatasetID(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the ID property.
-
getDatasetImageRef
public java.lang.String getDatasetImageRef(int datasetIndex, int imageRefIndex)Description copied from interface:MetadataRetrieve
Get the ImageRef property of Dataset.- Parameters:
datasetIndex
- the Dataset index.imageRefIndex
- ImageRef index.- Returns:
- the ImageRef property.
-
getDatasetName
public java.lang.String getDatasetName(int datasetIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Dataset.- Parameters:
datasetIndex
- the Dataset index.- Returns:
- the Name property.
-
getDetectorAmplificationGain
public java.lang.Double getDetectorAmplificationGain(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the AmplificationGain property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the AmplificationGain property.
-
getDetectorAnnotationRef
public java.lang.String getDetectorAnnotationRef(int instrumentIndex, int detectorIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getDetectorGain
public java.lang.Double getDetectorGain(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the Gain property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Gain property.
-
getDetectorID
public java.lang.String getDetectorID(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the ID property.
-
getDetectorLotNumber
public java.lang.String getDetectorLotNumber(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the LotNumber property.
-
getDetectorManufacturer
public java.lang.String getDetectorManufacturer(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Manufacturer property.
-
getDetectorModel
public java.lang.String getDetectorModel(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Model property.
-
getDetectorOffset
public java.lang.Double getDetectorOffset(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the Offset property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Offset property.
-
getDetectorSerialNumber
public java.lang.String getDetectorSerialNumber(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the SerialNumber property.
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getDetectorType
Description copied from interface:MetadataRetrieve
Get the Type property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Type property.
-
getDetectorVoltage
Description copied from interface:MetadataRetrieve
Get the Voltage property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Voltage property.
-
getDetectorZoom
public java.lang.Double getDetectorZoom(int instrumentIndex, int detectorIndex)Description copied from interface:MetadataRetrieve
Get the Zoom property of Detector.- Parameters:
instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.- Returns:
- the Zoom property.
-
getDetectorSettingsBinning
Description copied from interface:MetadataRetrieve
Get the Binning property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Binning property.
-
getDetectorSettingsGain
public java.lang.Double getDetectorSettingsGain(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the Gain property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Gain property.
-
getDetectorSettingsID
public java.lang.String getDetectorSettingsID(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the ID property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the ID property.
-
getDetectorSettingsIntegration
Description copied from interface:MetadataRetrieve
Get the Integration property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Integration property.
-
getDetectorSettingsOffset
public java.lang.Double getDetectorSettingsOffset(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the Offset property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Offset property.
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getDetectorSettingsReadOutRate
Description copied from interface:MetadataRetrieve
Get the ReadOutRate property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the ReadOutRate property.
-
getDetectorSettingsVoltage
Description copied from interface:MetadataRetrieve
Get the Voltage property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Voltage property.
-
getDetectorSettingsZoom
public java.lang.Double getDetectorSettingsZoom(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the Zoom property of DetectorSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Zoom property.
-
getDichroicAnnotationRef
public java.lang.String getDichroicAnnotationRef(int instrumentIndex, int dichroicIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getDichroicID
public java.lang.String getDichroicID(int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.- Returns:
- the ID property.
-
getDichroicLotNumber
public java.lang.String getDichroicLotNumber(int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.- Returns:
- the LotNumber property.
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getDichroicManufacturer
public java.lang.String getDichroicManufacturer(int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.- Returns:
- the Manufacturer property.
-
getDichroicModel
public java.lang.String getDichroicModel(int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.- Returns:
- the Model property.
-
getDichroicSerialNumber
public java.lang.String getDichroicSerialNumber(int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Dichroic.- Parameters:
instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.- Returns:
- the SerialNumber property.
-
getDoubleAnnotationAnnotationRef
public java.lang.String getDoubleAnnotationAnnotationRef(int doubleAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of DoubleAnnotation.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getDoubleAnnotationAnnotator
public java.lang.String getDoubleAnnotationAnnotator(int doubleAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of DoubleAnnotation.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.- Returns:
- the Annotator property.
-
getDoubleAnnotationDescription
public java.lang.String getDoubleAnnotationDescription(int doubleAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of DoubleAnnotation.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.- Returns:
- the Description property.
-
getDoubleAnnotationID
public java.lang.String getDoubleAnnotationID(int doubleAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of DoubleAnnotation.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.- Returns:
- the ID property.
-
getDoubleAnnotationNamespace
public java.lang.String getDoubleAnnotationNamespace(int doubleAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of DoubleAnnotation.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.- Returns:
- the Namespace property.
-
getDoubleAnnotationValue
public java.lang.Double getDoubleAnnotationValue(int doubleAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of DoubleAnnotation.- Parameters:
doubleAnnotationIndex
- the DoubleAnnotation index.- Returns:
- the Value property.
-
getEllipseAnnotationRef
public java.lang.String getEllipseAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getEllipseFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getEllipseFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getEllipseFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getEllipseFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getEllipseFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getEllipseID
public java.lang.String getEllipseID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getEllipseLocked
public java.lang.Boolean getEllipseLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getEllipseRadiusX
public java.lang.Double getEllipseRadiusX(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the RadiusX property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the RadiusX property.
-
getEllipseRadiusY
public java.lang.Double getEllipseRadiusY(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the RadiusY property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the RadiusY property.
-
getEllipseStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getEllipseStrokeDashArray
public java.lang.String getEllipseStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getEllipseStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getEllipseText
public java.lang.String getEllipseText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getEllipseTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getEllipseTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getEllipseTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getEllipseTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getEllipseX
public java.lang.Double getEllipseX(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X property.
-
getEllipseY
public java.lang.Double getEllipseY(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y property of Ellipse.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y property.
-
getExperimentDescription
public java.lang.String getExperimentDescription(int experimentIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Experiment.- Parameters:
experimentIndex
- the Experiment index.- Returns:
- the Description property.
-
getExperimentExperimenterRef
public java.lang.String getExperimentExperimenterRef(int experimentIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterRef property of Experiment.- Parameters:
experimentIndex
- the Experiment index.- Returns:
- the ExperimenterRef property.
-
getExperimentID
public java.lang.String getExperimentID(int experimentIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Experiment.- Parameters:
experimentIndex
- the Experiment index.- Returns:
- the ID property.
-
getExperimentType
Description copied from interface:MetadataRetrieve
Get the Type property of Experiment.- Parameters:
experimentIndex
- the Experiment index.- Returns:
- the Type property.
-
getExperimenterAnnotationRef
public java.lang.String getExperimenterAnnotationRef(int experimenterIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getExperimenterEmail
public java.lang.String getExperimenterEmail(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the Email property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the Email property.
-
getExperimenterFirstName
public java.lang.String getExperimenterFirstName(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the FirstName property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the FirstName property.
-
getExperimenterID
public java.lang.String getExperimenterID(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the ID property.
-
getExperimenterInstitution
public java.lang.String getExperimenterInstitution(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the Institution property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the Institution property.
-
getExperimenterLastName
public java.lang.String getExperimenterLastName(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the LastName property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the LastName property.
-
getExperimenterMiddleName
public java.lang.String getExperimenterMiddleName(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the MiddleName property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the MiddleName property.
-
getExperimenterUserName
public java.lang.String getExperimenterUserName(int experimenterIndex)Description copied from interface:MetadataRetrieve
Get the UserName property of Experimenter.- Parameters:
experimenterIndex
- the Experimenter index.- Returns:
- the UserName property.
-
getExperimenterGroupAnnotationRef
public java.lang.String getExperimenterGroupAnnotationRef(int experimenterGroupIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getExperimenterGroupDescription
public java.lang.String getExperimenterGroupDescription(int experimenterGroupIndex)Description copied from interface:MetadataRetrieve
Get the Description property of ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.- Returns:
- the Description property.
-
getExperimenterGroupExperimenterRef
public java.lang.String getExperimenterGroupExperimenterRef(int experimenterGroupIndex, int experimenterRefIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterRef property of ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.experimenterRefIndex
- ExperimenterRef index.- Returns:
- the ExperimenterRef property.
-
getExperimenterGroupID
public java.lang.String getExperimenterGroupID(int experimenterGroupIndex)Description copied from interface:MetadataRetrieve
Get the ID property of ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.- Returns:
- the ID property.
-
getExperimenterGroupLeader
public java.lang.String getExperimenterGroupLeader(int experimenterGroupIndex, int leaderIndex)Description copied from interface:MetadataRetrieve
Get the Leader property of ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.leaderIndex
- Leader index.- Returns:
- the Leader property.
-
getExperimenterGroupName
public java.lang.String getExperimenterGroupName(int experimenterGroupIndex)Description copied from interface:MetadataRetrieve
Get the Name property of ExperimenterGroup.- Parameters:
experimenterGroupIndex
- the ExperimenterGroup index.- Returns:
- the Name property.
-
getFilamentAnnotationRef
public java.lang.String getFilamentAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getFilamentID
public java.lang.String getFilamentID(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the ID property.
-
getFilamentLotNumber
public java.lang.String getFilamentLotNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LotNumber property.
-
getFilamentManufacturer
public java.lang.String getFilamentManufacturer(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Manufacturer property.
-
getFilamentModel
public java.lang.String getFilamentModel(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Model property.
-
getFilamentPower
Description copied from interface:MetadataRetrieve
Get the Power property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Power property.
-
getFilamentSerialNumber
public java.lang.String getFilamentSerialNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the SerialNumber property.
-
getFilamentType
Description copied from interface:MetadataRetrieve
Get the Type property of Filament.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Type property.
-
getFileAnnotationAnnotationRef
public java.lang.String getFileAnnotationAnnotationRef(int fileAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of FileAnnotation.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getFileAnnotationAnnotator
public java.lang.String getFileAnnotationAnnotator(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of FileAnnotation.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Annotator property.
-
getFileAnnotationDescription
public java.lang.String getFileAnnotationDescription(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of FileAnnotation.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Description property.
-
getFileAnnotationID
public java.lang.String getFileAnnotationID(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of FileAnnotation.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the ID property.
-
getFileAnnotationNamespace
public java.lang.String getFileAnnotationNamespace(int fileAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of FileAnnotation.- Parameters:
fileAnnotationIndex
- the FileAnnotation index.- Returns:
- the Namespace property.
-
getFilterAnnotationRef
public java.lang.String getFilterAnnotationRef(int instrumentIndex, int filterIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getFilterFilterWheel
public java.lang.String getFilterFilterWheel(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the FilterWheel property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the FilterWheel property.
-
getFilterID
public java.lang.String getFilterID(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the ID property.
-
getFilterLotNumber
public java.lang.String getFilterLotNumber(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the LotNumber property.
-
getFilterManufacturer
public java.lang.String getFilterManufacturer(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the Manufacturer property.
-
getFilterModel
public java.lang.String getFilterModel(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the Model property.
-
getFilterSerialNumber
public java.lang.String getFilterSerialNumber(int instrumentIndex, int filterIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the SerialNumber property.
-
getFilterType
Description copied from interface:MetadataRetrieve
Get the Type property of Filter.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the Type property.
-
getFilterSetDichroicRef
public java.lang.String getFilterSetDichroicRef(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the DichroicRef property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the DichroicRef property.
-
getFilterSetEmissionFilterRef
public java.lang.String getFilterSetEmissionFilterRef(int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)Description copied from interface:MetadataRetrieve
Get the EmissionFilterRef property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.emissionFilterRefIndex
- EmissionFilterRef index.- Returns:
- the EmissionFilterRef property.
-
getFilterSetExcitationFilterRef
public java.lang.String getFilterSetExcitationFilterRef(int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)Description copied from interface:MetadataRetrieve
Get the ExcitationFilterRef property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.excitationFilterRefIndex
- ExcitationFilterRef index.- Returns:
- the ExcitationFilterRef property.
-
getFilterSetID
public java.lang.String getFilterSetID(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the ID property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the ID property.
-
getFilterSetLotNumber
public java.lang.String getFilterSetLotNumber(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the LotNumber property.
-
getFilterSetManufacturer
public java.lang.String getFilterSetManufacturer(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the Manufacturer property.
-
getFilterSetModel
public java.lang.String getFilterSetModel(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the Model property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the Model property.
-
getFilterSetSerialNumber
public java.lang.String getFilterSetSerialNumber(int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of FilterSet.- Parameters:
instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.- Returns:
- the SerialNumber property.
-
getFolderAnnotationRef
public java.lang.String getFolderAnnotationRef(int folderIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Folder.- Parameters:
folderIndex
- the Folder index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getFolderDescription
public java.lang.String getFolderDescription(int folderIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Folder.- Parameters:
folderIndex
- the Folder index.- Returns:
- the Description property.
-
getFolderFolderRef
public java.lang.String getFolderFolderRef(int folderIndex, int folderRefIndex)Description copied from interface:MetadataRetrieve
Get the FolderRef property of Folder.- Parameters:
folderIndex
- the Folder index.folderRefIndex
- FolderRef index.- Returns:
- the FolderRef property.
-
getFolderID
public java.lang.String getFolderID(int folderIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Folder.- Parameters:
folderIndex
- the Folder index.- Returns:
- the ID property.
-
getFolderImageRef
public java.lang.String getFolderImageRef(int folderIndex, int imageRefIndex)Description copied from interface:MetadataRetrieve
Get the ImageRef property of Folder.- Parameters:
folderIndex
- the Folder index.imageRefIndex
- ImageRef index.- Returns:
- the ImageRef property.
-
getFolderName
public java.lang.String getFolderName(int folderIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Folder.- Parameters:
folderIndex
- the Folder index.- Returns:
- the Name property.
-
getFolderROIRef
public java.lang.String getFolderROIRef(int folderIndex, int ROIRefIndex)Description copied from interface:MetadataRetrieve
Get the ROIRef property of Folder.- Parameters:
folderIndex
- the Folder index.ROIRefIndex
- ROIRef index.- Returns:
- the ROIRef property.
-
getGenericExcitationSourceAnnotationRef
public java.lang.String getGenericExcitationSourceAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getGenericExcitationSourceID
public java.lang.String getGenericExcitationSourceID(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the ID property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the ID property.
-
getGenericExcitationSourceLotNumber
public java.lang.String getGenericExcitationSourceLotNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LotNumber property.
-
getGenericExcitationSourceManufacturer
public java.lang.String getGenericExcitationSourceManufacturer(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Manufacturer property.
-
getGenericExcitationSourceModel
public java.lang.String getGenericExcitationSourceModel(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Model property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Model property.
-
getGenericExcitationSourcePower
Description copied from interface:MetadataRetrieve
Get the Power property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Power property.
-
getGenericExcitationSourceSerialNumber
public java.lang.String getGenericExcitationSourceSerialNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of GenericExcitationSource.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the SerialNumber property.
-
getImageAcquisitionDate
Description copied from interface:MetadataRetrieve
Get the AcquisitionDate property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the AcquisitionDate property.
-
getImageAnnotationRef
public java.lang.String getImageAnnotationRef(int imageIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Image.- Parameters:
imageIndex
- the Image index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getImageDescription
public java.lang.String getImageDescription(int imageIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the Description property.
-
getImageExperimentRef
public java.lang.String getImageExperimentRef(int imageIndex)Description copied from interface:MetadataRetrieve
Get the ExperimentRef property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the ExperimentRef property.
-
getImageExperimenterGroupRef
public java.lang.String getImageExperimenterGroupRef(int imageIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterGroupRef property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the ExperimenterGroupRef property.
-
getImageExperimenterRef
public java.lang.String getImageExperimenterRef(int imageIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterRef property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the ExperimenterRef property.
-
getImageID
public java.lang.String getImageID(int imageIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the ID property.
-
getImageInstrumentRef
public java.lang.String getImageInstrumentRef(int imageIndex)Description copied from interface:MetadataRetrieve
Get the InstrumentRef property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the InstrumentRef property.
-
getImageMicrobeamManipulationRef
public java.lang.String getImageMicrobeamManipulationRef(int imageIndex, int microbeamManipulationRefIndex)Description copied from interface:MetadataRetrieve
Get the MicrobeamManipulationRef property of Image.- Parameters:
imageIndex
- the Image index.microbeamManipulationRefIndex
- MicrobeamManipulationRef index.- Returns:
- the MicrobeamManipulationRef property.
-
getImageName
public java.lang.String getImageName(int imageIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Image.- Parameters:
imageIndex
- the Image index.- Returns:
- the Name property.
-
getImageROIRef
public java.lang.String getImageROIRef(int imageIndex, int ROIRefIndex)Description copied from interface:MetadataRetrieve
Get the ROIRef property of Image.- Parameters:
imageIndex
- the Image index.ROIRefIndex
- ROIRef index.- Returns:
- the ROIRef property.
-
getImagingEnvironmentAirPressure
Description copied from interface:MetadataRetrieve
Get the AirPressure property of ImagingEnvironment.- Parameters:
imageIndex
- the Image index.- Returns:
- the AirPressure property.
-
getImagingEnvironmentCO2Percent
Description copied from interface:MetadataRetrieve
Get the CO2Percent property of ImagingEnvironment.- Parameters:
imageIndex
- the Image index.- Returns:
- the CO2Percent property.
-
getImagingEnvironmentHumidity
Description copied from interface:MetadataRetrieve
Get the Humidity property of ImagingEnvironment.- Parameters:
imageIndex
- the Image index.- Returns:
- the Humidity property.
-
getImagingEnvironmentTemperature
Description copied from interface:MetadataRetrieve
Get the Temperature property of ImagingEnvironment.- Parameters:
imageIndex
- the Image index.- Returns:
- the Temperature property.
-
getInstrumentAnnotationRef
public java.lang.String getInstrumentAnnotationRef(int instrumentIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Instrument.- Parameters:
instrumentIndex
- the Instrument index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getInstrumentID
public java.lang.String getInstrumentID(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Instrument.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the ID property.
-
getLabelAnnotationRef
public java.lang.String getLabelAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getLabelFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getLabelFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getLabelFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getLabelFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getLabelFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getLabelID
public java.lang.String getLabelID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getLabelLocked
public java.lang.Boolean getLabelLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getLabelStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getLabelStrokeDashArray
public java.lang.String getLabelStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getLabelStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getLabelText
public java.lang.String getLabelText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getLabelTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getLabelTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getLabelTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getLabelTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getLabelX
public java.lang.Double getLabelX(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X property.
-
getLabelY
public java.lang.Double getLabelY(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y property of Label.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y property.
-
getLaserAnnotationRef
public java.lang.String getLaserAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getLaserFrequencyMultiplication
Description copied from interface:MetadataRetrieve
Get the FrequencyMultiplication property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the FrequencyMultiplication property.
-
getLaserID
public java.lang.String getLaserID(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the ID property.
-
getLaserLaserMedium
Description copied from interface:MetadataRetrieve
Get the LaserMedium property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LaserMedium property.
-
getLaserLotNumber
public java.lang.String getLaserLotNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LotNumber property.
-
getLaserManufacturer
public java.lang.String getLaserManufacturer(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Manufacturer property.
-
getLaserModel
public java.lang.String getLaserModel(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Model property.
-
getLaserPockelCell
public java.lang.Boolean getLaserPockelCell(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the PockelCell property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the PockelCell property.
-
getLaserPower
Description copied from interface:MetadataRetrieve
Get the Power property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Power property.
-
getLaserPulse
Description copied from interface:MetadataRetrieve
Get the Pulse property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Pulse property.
-
getLaserPump
public java.lang.String getLaserPump(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Pump property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Pump property.
-
getLaserRepetitionRate
Description copied from interface:MetadataRetrieve
Get the RepetitionRate property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the RepetitionRate property.
-
getLaserSerialNumber
public java.lang.String getLaserSerialNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the SerialNumber property.
-
getLaserTuneable
public java.lang.Boolean getLaserTuneable(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Tuneable property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Tuneable property.
-
getLaserType
Description copied from interface:MetadataRetrieve
Get the Type property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Type property.
-
getLaserWavelength
Description copied from interface:MetadataRetrieve
Get the Wavelength property of Laser.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Wavelength property.
-
getLightEmittingDiodeAnnotationRef
public java.lang.String getLightEmittingDiodeAnnotationRef(int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getLightEmittingDiodeID
public java.lang.String getLightEmittingDiodeID(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the ID property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the ID property.
-
getLightEmittingDiodeLotNumber
public java.lang.String getLightEmittingDiodeLotNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the LotNumber property.
-
getLightEmittingDiodeManufacturer
public java.lang.String getLightEmittingDiodeManufacturer(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Manufacturer property.
-
getLightEmittingDiodeModel
public java.lang.String getLightEmittingDiodeModel(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the Model property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Model property.
-
getLightEmittingDiodePower
Description copied from interface:MetadataRetrieve
Get the Power property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the Power property.
-
getLightEmittingDiodeSerialNumber
public java.lang.String getLightEmittingDiodeSerialNumber(int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of LightEmittingDiode.- Parameters:
instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.- Returns:
- the SerialNumber property.
-
getLightPathAnnotationRef
public java.lang.String getLightPathAnnotationRef(int imageIndex, int channelIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getLightPathDichroicRef
public java.lang.String getLightPathDichroicRef(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the DichroicRef property of LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the DichroicRef property.
-
getLightPathEmissionFilterRef
public java.lang.String getLightPathEmissionFilterRef(int imageIndex, int channelIndex, int emissionFilterRefIndex)Description copied from interface:MetadataRetrieve
Get the EmissionFilterRef property of LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.emissionFilterRefIndex
- EmissionFilterRef index.- Returns:
- the EmissionFilterRef property.
-
getLightPathExcitationFilterRef
public java.lang.String getLightPathExcitationFilterRef(int imageIndex, int channelIndex, int excitationFilterRefIndex)Description copied from interface:MetadataRetrieve
Get the ExcitationFilterRef property of LightPath.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.excitationFilterRefIndex
- ExcitationFilterRef index.- Returns:
- the ExcitationFilterRef property.
-
getChannelLightSourceSettingsAttenuation
Description copied from interface:MetadataRetrieve
Get the Attenuation property of LightSourceSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Attenuation property.
-
getMicrobeamManipulationLightSourceSettingsAttenuation
public PercentFraction getMicrobeamManipulationLightSourceSettingsAttenuation(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)Description copied from interface:MetadataRetrieve
Get the Attenuation property of LightSourceSettings.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.lightSourceSettingsIndex
- the LightSourceSettings index.- Returns:
- the Attenuation property.
-
getChannelLightSourceSettingsID
public java.lang.String getChannelLightSourceSettingsID(int imageIndex, int channelIndex)Description copied from interface:MetadataRetrieve
Get the ID property of LightSourceSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the ID property.
-
getMicrobeamManipulationLightSourceSettingsID
public java.lang.String getMicrobeamManipulationLightSourceSettingsID(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)Description copied from interface:MetadataRetrieve
Get the ID property of LightSourceSettings.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.lightSourceSettingsIndex
- the LightSourceSettings index.- Returns:
- the ID property.
-
getChannelLightSourceSettingsWavelength
Description copied from interface:MetadataRetrieve
Get the Wavelength property of LightSourceSettings.- Parameters:
imageIndex
- the Image index.channelIndex
- the Channel index.- Returns:
- the Wavelength property.
-
getMicrobeamManipulationLightSourceSettingsWavelength
public Length getMicrobeamManipulationLightSourceSettingsWavelength(int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)Description copied from interface:MetadataRetrieve
Get the Wavelength property of LightSourceSettings.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.lightSourceSettingsIndex
- the LightSourceSettings index.- Returns:
- the Wavelength property.
-
getLineAnnotationRef
public java.lang.String getLineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getLineFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getLineFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getLineFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getLineFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getLineFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getLineID
public java.lang.String getLineID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getLineLocked
public java.lang.Boolean getLineLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getLineMarkerEnd
Description copied from interface:MetadataRetrieve
Get the MarkerEnd property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the MarkerEnd property.
-
getLineMarkerStart
Description copied from interface:MetadataRetrieve
Get the MarkerStart property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the MarkerStart property.
-
getLineStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getLineStrokeDashArray
public java.lang.String getLineStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getLineStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getLineText
public java.lang.String getLineText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getLineTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getLineTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getLineTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getLineTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getLineX1
public java.lang.Double getLineX1(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X1 property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X1 property.
-
getLineX2
public java.lang.Double getLineX2(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X2 property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X2 property.
-
getLineY1
public java.lang.Double getLineY1(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y1 property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y1 property.
-
getLineY2
public java.lang.Double getLineY2(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y2 property of Line.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y2 property.
-
getListAnnotationAnnotationRef
public java.lang.String getListAnnotationAnnotationRef(int listAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of ListAnnotation.- Parameters:
listAnnotationIndex
- the ListAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getListAnnotationAnnotator
public java.lang.String getListAnnotationAnnotator(int listAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of ListAnnotation.- Parameters:
listAnnotationIndex
- the ListAnnotation index.- Returns:
- the Annotator property.
-
getListAnnotationDescription
public java.lang.String getListAnnotationDescription(int listAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of ListAnnotation.- Parameters:
listAnnotationIndex
- the ListAnnotation index.- Returns:
- the Description property.
-
getListAnnotationID
public java.lang.String getListAnnotationID(int listAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of ListAnnotation.- Parameters:
listAnnotationIndex
- the ListAnnotation index.- Returns:
- the ID property.
-
getListAnnotationNamespace
public java.lang.String getListAnnotationNamespace(int listAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of ListAnnotation.- Parameters:
listAnnotationIndex
- the ListAnnotation index.- Returns:
- the Namespace property.
-
getLongAnnotationAnnotationRef
public java.lang.String getLongAnnotationAnnotationRef(int longAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of LongAnnotation.- Parameters:
longAnnotationIndex
- the LongAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getLongAnnotationAnnotator
public java.lang.String getLongAnnotationAnnotator(int longAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of LongAnnotation.- Parameters:
longAnnotationIndex
- the LongAnnotation index.- Returns:
- the Annotator property.
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getLongAnnotationDescription
public java.lang.String getLongAnnotationDescription(int longAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of LongAnnotation.- Parameters:
longAnnotationIndex
- the LongAnnotation index.- Returns:
- the Description property.
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getLongAnnotationID
public java.lang.String getLongAnnotationID(int longAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of LongAnnotation.- Parameters:
longAnnotationIndex
- the LongAnnotation index.- Returns:
- the ID property.
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getLongAnnotationNamespace
public java.lang.String getLongAnnotationNamespace(int longAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of LongAnnotation.- Parameters:
longAnnotationIndex
- the LongAnnotation index.- Returns:
- the Namespace property.
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getLongAnnotationValue
public java.lang.Long getLongAnnotationValue(int longAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of LongAnnotation.- Parameters:
longAnnotationIndex
- the LongAnnotation index.- Returns:
- the Value property.
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getMapAnnotationAnnotationRef
public java.lang.String getMapAnnotationAnnotationRef(int mapAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of MapAnnotation.- Parameters:
mapAnnotationIndex
- the MapAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getMapAnnotationAnnotator
public java.lang.String getMapAnnotationAnnotator(int mapAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of MapAnnotation.- Parameters:
mapAnnotationIndex
- the MapAnnotation index.- Returns:
- the Annotator property.
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getMapAnnotationDescription
public java.lang.String getMapAnnotationDescription(int mapAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of MapAnnotation.- Parameters:
mapAnnotationIndex
- the MapAnnotation index.- Returns:
- the Description property.
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getMapAnnotationID
public java.lang.String getMapAnnotationID(int mapAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of MapAnnotation.- Parameters:
mapAnnotationIndex
- the MapAnnotation index.- Returns:
- the ID property.
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getMapAnnotationNamespace
public java.lang.String getMapAnnotationNamespace(int mapAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of MapAnnotation.- Parameters:
mapAnnotationIndex
- the MapAnnotation index.- Returns:
- the Namespace property.
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getMaskAnnotationRef
public java.lang.String getMaskAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getMaskFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
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getMaskFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
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getMaskFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
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getMaskFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
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getMaskFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
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getMaskHeight
public java.lang.Double getMaskHeight(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Height property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Height property.
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getMaskID
public java.lang.String getMaskID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
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getMaskLocked
public java.lang.Boolean getMaskLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
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getMaskStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
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getMaskStrokeDashArray
public java.lang.String getMaskStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
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getMaskStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
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getMaskText
public java.lang.String getMaskText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
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getMaskTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
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getMaskTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
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getMaskTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
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getMaskTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
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getMaskWidth
public java.lang.Double getMaskWidth(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Width property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Width property.
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getMaskX
public java.lang.Double getMaskX(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X property.
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getMaskY
public java.lang.Double getMaskY(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y property of Mask.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y property.
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getMicrobeamManipulationDescription
public java.lang.String getMicrobeamManipulationDescription(int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.- Returns:
- the Description property.
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getMicrobeamManipulationExperimenterRef
public java.lang.String getMicrobeamManipulationExperimenterRef(int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterRef property of MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.- Returns:
- the ExperimenterRef property.
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getMicrobeamManipulationID
public java.lang.String getMicrobeamManipulationID(int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.- Returns:
- the ID property.
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getMicrobeamManipulationROIRef
public java.lang.String getMicrobeamManipulationROIRef(int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)Description copied from interface:MetadataRetrieve
Get the ROIRef property of MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.ROIRefIndex
- ROIRef index.- Returns:
- the ROIRef property.
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getMicrobeamManipulationType
public MicrobeamManipulationType getMicrobeamManipulationType(int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataRetrieve
Get the Type property of MicrobeamManipulation.- Parameters:
experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.- Returns:
- the Type property.
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getMicroscopeLotNumber
public java.lang.String getMicroscopeLotNumber(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Microscope.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the LotNumber property.
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getMicroscopeManufacturer
public java.lang.String getMicroscopeManufacturer(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Microscope.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the Manufacturer property.
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getMicroscopeModel
public java.lang.String getMicroscopeModel(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Microscope.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the Model property.
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getMicroscopeSerialNumber
public java.lang.String getMicroscopeSerialNumber(int instrumentIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Microscope.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the SerialNumber property.
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getMicroscopeType
Description copied from interface:MetadataRetrieve
Get the Type property of Microscope.- Parameters:
instrumentIndex
- the Instrument index.- Returns:
- the Type property.
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getObjectiveAnnotationRef
public java.lang.String getObjectiveAnnotationRef(int instrumentIndex, int objectiveIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getObjectiveCalibratedMagnification
public java.lang.Double getObjectiveCalibratedMagnification(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the CalibratedMagnification property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the CalibratedMagnification property.
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getObjectiveCorrection
Description copied from interface:MetadataRetrieve
Get the Correction property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the Correction property.
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getObjectiveID
public java.lang.String getObjectiveID(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the ID property.
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getObjectiveImmersion
Description copied from interface:MetadataRetrieve
Get the Immersion property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the Immersion property.
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getObjectiveIris
public java.lang.Boolean getObjectiveIris(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the Iris property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the Iris property.
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getObjectiveLensNA
public java.lang.Double getObjectiveLensNA(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the LensNA property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the LensNA property.
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getObjectiveLotNumber
public java.lang.String getObjectiveLotNumber(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the LotNumber property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the LotNumber property.
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getObjectiveManufacturer
public java.lang.String getObjectiveManufacturer(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the Manufacturer property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the Manufacturer property.
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getObjectiveModel
public java.lang.String getObjectiveModel(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the Model property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the Model property.
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getObjectiveNominalMagnification
public java.lang.Double getObjectiveNominalMagnification(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the NominalMagnification property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the NominalMagnification property.
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getObjectiveSerialNumber
public java.lang.String getObjectiveSerialNumber(int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataRetrieve
Get the SerialNumber property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the SerialNumber property.
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getObjectiveWorkingDistance
Description copied from interface:MetadataRetrieve
Get the WorkingDistance property of Objective.- Parameters:
instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.- Returns:
- the WorkingDistance property.
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getObjectiveSettingsCorrectionCollar
public java.lang.Double getObjectiveSettingsCorrectionCollar(int imageIndex)Description copied from interface:MetadataRetrieve
Get the CorrectionCollar property of ObjectiveSettings.- Parameters:
imageIndex
- the Image index.- Returns:
- the CorrectionCollar property.
-
getObjectiveSettingsID
public java.lang.String getObjectiveSettingsID(int imageIndex)Description copied from interface:MetadataRetrieve
Get the ID property of ObjectiveSettings.- Parameters:
imageIndex
- the Image index.- Returns:
- the ID property.
-
getObjectiveSettingsMedium
Description copied from interface:MetadataRetrieve
Get the Medium property of ObjectiveSettings.- Parameters:
imageIndex
- the Image index.- Returns:
- the Medium property.
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getObjectiveSettingsRefractiveIndex
public java.lang.Double getObjectiveSettingsRefractiveIndex(int imageIndex)Description copied from interface:MetadataRetrieve
Get the RefractiveIndex property of ObjectiveSettings.- Parameters:
imageIndex
- the Image index.- Returns:
- the RefractiveIndex property.
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getPixelsBigEndian
public java.lang.Boolean getPixelsBigEndian(int imageIndex)Description copied from interface:MetadataRetrieve
Get the BigEndian property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the BigEndian property.
-
getPixelsDimensionOrder
Description copied from interface:MetadataRetrieve
Get the DimensionOrder property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the DimensionOrder property.
-
getPixelsID
public java.lang.String getPixelsID(int imageIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the ID property.
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getPixelsInterleaved
public java.lang.Boolean getPixelsInterleaved(int imageIndex)Description copied from interface:MetadataRetrieve
Get the Interleaved property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the Interleaved property.
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getPixelsPhysicalSizeX
Description copied from interface:MetadataRetrieve
Get the PhysicalSizeX property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the PhysicalSizeX property.
-
getPixelsPhysicalSizeY
Description copied from interface:MetadataRetrieve
Get the PhysicalSizeY property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the PhysicalSizeY property.
-
getPixelsPhysicalSizeZ
Description copied from interface:MetadataRetrieve
Get the PhysicalSizeZ property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the PhysicalSizeZ property.
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getPixelsSignificantBits
Description copied from interface:MetadataRetrieve
Get the SignificantBits property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the SignificantBits property.
-
getPixelsSizeC
Description copied from interface:MetadataRetrieve
Get the SizeC property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the SizeC property.
-
getPixelsSizeT
Description copied from interface:MetadataRetrieve
Get the SizeT property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the SizeT property.
-
getPixelsSizeX
Description copied from interface:MetadataRetrieve
Get the SizeX property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the SizeX property.
-
getPixelsSizeY
Description copied from interface:MetadataRetrieve
Get the SizeY property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the SizeY property.
-
getPixelsSizeZ
Description copied from interface:MetadataRetrieve
Get the SizeZ property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the SizeZ property.
-
getPixelsTimeIncrement
Description copied from interface:MetadataRetrieve
Get the TimeIncrement property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the TimeIncrement property.
-
getPixelsType
Description copied from interface:MetadataRetrieve
Get the Type property of Pixels.- Parameters:
imageIndex
- the Image index.- Returns:
- the Type property.
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getPlaneAnnotationRef
public java.lang.String getPlaneAnnotationRef(int imageIndex, int planeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getPlaneDeltaT
Description copied from interface:MetadataRetrieve
Get the DeltaT property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the DeltaT property.
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getPlaneExposureTime
Description copied from interface:MetadataRetrieve
Get the ExposureTime property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the ExposureTime property.
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getPlaneHashSHA1
public java.lang.String getPlaneHashSHA1(int imageIndex, int planeIndex)Description copied from interface:MetadataRetrieve
Get the HashSHA1 property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the HashSHA1 property.
-
getPlanePositionX
Description copied from interface:MetadataRetrieve
Get the PositionX property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the PositionX property.
-
getPlanePositionY
Description copied from interface:MetadataRetrieve
Get the PositionY property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the PositionY property.
-
getPlanePositionZ
Description copied from interface:MetadataRetrieve
Get the PositionZ property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the PositionZ property.
-
getPlaneTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the TheC property.
-
getPlaneTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the TheT property.
-
getPlaneTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Plane.- Parameters:
imageIndex
- the Image index.planeIndex
- the Plane index.- Returns:
- the TheZ property.
-
getPlateAnnotationRef
public java.lang.String getPlateAnnotationRef(int plateIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Plate.- Parameters:
plateIndex
- the Plate index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getPlateColumnNamingConvention
Description copied from interface:MetadataRetrieve
Get the ColumnNamingConvention property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the ColumnNamingConvention property.
-
getPlateColumns
Description copied from interface:MetadataRetrieve
Get the Columns property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the Columns property.
-
getPlateDescription
public java.lang.String getPlateDescription(int plateIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the Description property.
-
getPlateExternalIdentifier
public java.lang.String getPlateExternalIdentifier(int plateIndex)Description copied from interface:MetadataRetrieve
Get the ExternalIdentifier property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the ExternalIdentifier property.
-
getPlateFieldIndex
Description copied from interface:MetadataRetrieve
Get the FieldIndex property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the FieldIndex property.
-
getPlateID
public java.lang.String getPlateID(int plateIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the ID property.
-
getPlateName
public java.lang.String getPlateName(int plateIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the Name property.
-
getPlateRowNamingConvention
Description copied from interface:MetadataRetrieve
Get the RowNamingConvention property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the RowNamingConvention property.
-
getPlateRows
Description copied from interface:MetadataRetrieve
Get the Rows property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the Rows property.
-
getPlateStatus
public java.lang.String getPlateStatus(int plateIndex)Description copied from interface:MetadataRetrieve
Get the Status property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the Status property.
-
getPlateWellOriginX
Description copied from interface:MetadataRetrieve
Get the WellOriginX property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the WellOriginX property.
-
getPlateWellOriginY
Description copied from interface:MetadataRetrieve
Get the WellOriginY property of Plate.- Parameters:
plateIndex
- the Plate index.- Returns:
- the WellOriginY property.
-
getPlateAcquisitionAnnotationRef
public java.lang.String getPlateAcquisitionAnnotationRef(int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getPlateAcquisitionDescription
public java.lang.String getPlateAcquisitionDescription(int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataRetrieve
Get the Description property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the Description property.
-
getPlateAcquisitionEndTime
Description copied from interface:MetadataRetrieve
Get the EndTime property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the EndTime property.
-
getPlateAcquisitionID
public java.lang.String getPlateAcquisitionID(int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataRetrieve
Get the ID property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the ID property.
-
getPlateAcquisitionMaximumFieldCount
public PositiveInteger getPlateAcquisitionMaximumFieldCount(int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataRetrieve
Get the MaximumFieldCount property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the MaximumFieldCount property.
-
getPlateAcquisitionName
public java.lang.String getPlateAcquisitionName(int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataRetrieve
Get the Name property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the Name property.
-
getPlateAcquisitionStartTime
Description copied from interface:MetadataRetrieve
Get the StartTime property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.- Returns:
- the StartTime property.
-
getPlateAcquisitionWellSampleRef
public java.lang.String getPlateAcquisitionWellSampleRef(int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)Description copied from interface:MetadataRetrieve
Get the WellSampleRef property of PlateAcquisition.- Parameters:
plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.wellSampleRefIndex
- WellSampleRef index.- Returns:
- the WellSampleRef property.
-
getPointAnnotationRef
public java.lang.String getPointAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getPointFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getPointFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getPointFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getPointFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getPointFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getPointID
public java.lang.String getPointID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getPointLocked
public java.lang.Boolean getPointLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getPointStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getPointStrokeDashArray
public java.lang.String getPointStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getPointStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getPointText
public java.lang.String getPointText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getPointTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getPointTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getPointTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getPointTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getPointX
public java.lang.Double getPointX(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X property.
-
getPointY
public java.lang.Double getPointY(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y property of Point.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y property.
-
getPolygonAnnotationRef
public java.lang.String getPolygonAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getPolygonFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getPolygonFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getPolygonFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getPolygonFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getPolygonFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getPolygonID
public java.lang.String getPolygonID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getPolygonLocked
public java.lang.Boolean getPolygonLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getPolygonPoints
public java.lang.String getPolygonPoints(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Points property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Points property.
-
getPolygonStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getPolygonStrokeDashArray
public java.lang.String getPolygonStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getPolygonStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getPolygonText
public java.lang.String getPolygonText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getPolygonTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getPolygonTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getPolygonTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getPolygonTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Polygon.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getPolylineAnnotationRef
public java.lang.String getPolylineAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getPolylineFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getPolylineFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getPolylineFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getPolylineFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getPolylineFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getPolylineID
public java.lang.String getPolylineID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getPolylineLocked
public java.lang.Boolean getPolylineLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getPolylineMarkerEnd
Description copied from interface:MetadataRetrieve
Get the MarkerEnd property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the MarkerEnd property.
-
getPolylineMarkerStart
Description copied from interface:MetadataRetrieve
Get the MarkerStart property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the MarkerStart property.
-
getPolylinePoints
public java.lang.String getPolylinePoints(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Points property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Points property.
-
getPolylineStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getPolylineStrokeDashArray
public java.lang.String getPolylineStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getPolylineStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getPolylineText
public java.lang.String getPolylineText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getPolylineTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getPolylineTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getPolylineTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getPolylineTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Polyline.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getProjectAnnotationRef
public java.lang.String getProjectAnnotationRef(int projectIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Project.- Parameters:
projectIndex
- the Project index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getProjectDatasetRef
public java.lang.String getProjectDatasetRef(int projectIndex, int datasetRefIndex)Description copied from interface:MetadataRetrieve
Get the DatasetRef property of Project.- Parameters:
projectIndex
- the Project index.datasetRefIndex
- DatasetRef index.- Returns:
- the DatasetRef property.
-
getProjectDescription
public java.lang.String getProjectDescription(int projectIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Project.- Parameters:
projectIndex
- the Project index.- Returns:
- the Description property.
-
getProjectExperimenterGroupRef
public java.lang.String getProjectExperimenterGroupRef(int projectIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterGroupRef property of Project.- Parameters:
projectIndex
- the Project index.- Returns:
- the ExperimenterGroupRef property.
-
getProjectExperimenterRef
public java.lang.String getProjectExperimenterRef(int projectIndex)Description copied from interface:MetadataRetrieve
Get the ExperimenterRef property of Project.- Parameters:
projectIndex
- the Project index.- Returns:
- the ExperimenterRef property.
-
getProjectID
public java.lang.String getProjectID(int projectIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Project.- Parameters:
projectIndex
- the Project index.- Returns:
- the ID property.
-
getProjectName
public java.lang.String getProjectName(int projectIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Project.- Parameters:
projectIndex
- the Project index.- Returns:
- the Name property.
-
getROIAnnotationRef
public java.lang.String getROIAnnotationRef(int ROIIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of ROI.- Parameters:
ROIIndex
- the ROI index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getROIDescription
public java.lang.String getROIDescription(int ROIIndex)Description copied from interface:MetadataRetrieve
Get the Description property of ROI.- Parameters:
ROIIndex
- the ROI index.- Returns:
- the Description property.
-
getROIID
public java.lang.String getROIID(int ROIIndex)Description copied from interface:MetadataRetrieve
Get the ID property of ROI.- Parameters:
ROIIndex
- the ROI index.- Returns:
- the ID property.
-
getROIName
public java.lang.String getROIName(int ROIIndex)Description copied from interface:MetadataRetrieve
Get the Name property of ROI.- Parameters:
ROIIndex
- the ROI index.- Returns:
- the Name property.
-
getReagentAnnotationRef
public java.lang.String getReagentAnnotationRef(int screenIndex, int reagentIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Reagent.- Parameters:
screenIndex
- the Screen index.reagentIndex
- the Reagent index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getReagentDescription
public java.lang.String getReagentDescription(int screenIndex, int reagentIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Reagent.- Parameters:
screenIndex
- the Screen index.reagentIndex
- the Reagent index.- Returns:
- the Description property.
-
getReagentID
public java.lang.String getReagentID(int screenIndex, int reagentIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Reagent.- Parameters:
screenIndex
- the Screen index.reagentIndex
- the Reagent index.- Returns:
- the ID property.
-
getReagentName
public java.lang.String getReagentName(int screenIndex, int reagentIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Reagent.- Parameters:
screenIndex
- the Screen index.reagentIndex
- the Reagent index.- Returns:
- the Name property.
-
getReagentReagentIdentifier
public java.lang.String getReagentReagentIdentifier(int screenIndex, int reagentIndex)Description copied from interface:MetadataRetrieve
Get the ReagentIdentifier property of Reagent.- Parameters:
screenIndex
- the Screen index.reagentIndex
- the Reagent index.- Returns:
- the ReagentIdentifier property.
-
getRectangleAnnotationRef
public java.lang.String getRectangleAnnotationRef(int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getRectangleFillColor
Description copied from interface:MetadataRetrieve
Get the FillColor property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillColor property.
-
getRectangleFillRule
Description copied from interface:MetadataRetrieve
Get the FillRule property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FillRule property.
-
getRectangleFontFamily
Description copied from interface:MetadataRetrieve
Get the FontFamily property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontFamily property.
-
getRectangleFontSize
Description copied from interface:MetadataRetrieve
Get the FontSize property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontSize property.
-
getRectangleFontStyle
Description copied from interface:MetadataRetrieve
Get the FontStyle property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the FontStyle property.
-
getRectangleHeight
public java.lang.Double getRectangleHeight(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Height property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Height property.
-
getRectangleID
public java.lang.String getRectangleID(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the ID property.
-
getRectangleLocked
public java.lang.Boolean getRectangleLocked(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Locked property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Locked property.
-
getRectangleStrokeColor
Description copied from interface:MetadataRetrieve
Get the StrokeColor property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeColor property.
-
getRectangleStrokeDashArray
public java.lang.String getRectangleStrokeDashArray(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the StrokeDashArray property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeDashArray property.
-
getRectangleStrokeWidth
Description copied from interface:MetadataRetrieve
Get the StrokeWidth property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the StrokeWidth property.
-
getRectangleText
public java.lang.String getRectangleText(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Text property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Text property.
-
getRectangleTheC
Description copied from interface:MetadataRetrieve
Get the TheC property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheC property.
-
getRectangleTheT
Description copied from interface:MetadataRetrieve
Get the TheT property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheT property.
-
getRectangleTheZ
Description copied from interface:MetadataRetrieve
Get the TheZ property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the TheZ property.
-
getRectangleTransform
Description copied from interface:MetadataRetrieve
Get the Transform property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Transform property.
-
getRectangleWidth
public java.lang.Double getRectangleWidth(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Width property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Width property.
-
getRectangleX
public java.lang.Double getRectangleX(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the X property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the X property.
-
getRectangleY
public java.lang.Double getRectangleY(int ROIIndex, int shapeIndex)Description copied from interface:MetadataRetrieve
Get the Y property of Rectangle.- Parameters:
ROIIndex
- the ROI index.shapeIndex
- the Shape index.- Returns:
- the Y property.
-
getRightsRightsHeld
public java.lang.String getRightsRightsHeld()Description copied from interface:MetadataRetrieve
Get the RightsHeld property of Rights.- Returns:
- the RightsHeld property.
-
getRightsRightsHolder
public java.lang.String getRightsRightsHolder()Description copied from interface:MetadataRetrieve
Get the RightsHolder property of Rights.- Returns:
- the RightsHolder property.
-
getScreenAnnotationRef
public java.lang.String getScreenAnnotationRef(int screenIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Screen.- Parameters:
screenIndex
- the Screen index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getScreenDescription
public java.lang.String getScreenDescription(int screenIndex)Description copied from interface:MetadataRetrieve
Get the Description property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the Description property.
-
getScreenID
public java.lang.String getScreenID(int screenIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the ID property.
-
getScreenName
public java.lang.String getScreenName(int screenIndex)Description copied from interface:MetadataRetrieve
Get the Name property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the Name property.
-
getScreenPlateRef
public java.lang.String getScreenPlateRef(int screenIndex, int plateRefIndex)Description copied from interface:MetadataRetrieve
Get the PlateRef property of Screen.- Parameters:
screenIndex
- the Screen index.plateRefIndex
- PlateRef index.- Returns:
- the PlateRef property.
-
getScreenProtocolDescription
public java.lang.String getScreenProtocolDescription(int screenIndex)Description copied from interface:MetadataRetrieve
Get the ProtocolDescription property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the ProtocolDescription property.
-
getScreenProtocolIdentifier
public java.lang.String getScreenProtocolIdentifier(int screenIndex)Description copied from interface:MetadataRetrieve
Get the ProtocolIdentifier property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the ProtocolIdentifier property.
-
getScreenReagentSetDescription
public java.lang.String getScreenReagentSetDescription(int screenIndex)Description copied from interface:MetadataRetrieve
Get the ReagentSetDescription property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the ReagentSetDescription property.
-
getScreenReagentSetIdentifier
public java.lang.String getScreenReagentSetIdentifier(int screenIndex)Description copied from interface:MetadataRetrieve
Get the ReagentSetIdentifier property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the ReagentSetIdentifier property.
-
getScreenType
public java.lang.String getScreenType(int screenIndex)Description copied from interface:MetadataRetrieve
Get the Type property of Screen.- Parameters:
screenIndex
- the Screen index.- Returns:
- the Type property.
-
getStageLabelName
public java.lang.String getStageLabelName(int imageIndex)Description copied from interface:MetadataRetrieve
Get the Name property of StageLabel.- Parameters:
imageIndex
- the Image index.- Returns:
- the Name property.
-
getStageLabelX
Description copied from interface:MetadataRetrieve
Get the X property of StageLabel.- Parameters:
imageIndex
- the Image index.- Returns:
- the X property.
-
getStageLabelY
Description copied from interface:MetadataRetrieve
Get the Y property of StageLabel.- Parameters:
imageIndex
- the Image index.- Returns:
- the Y property.
-
getStageLabelZ
Description copied from interface:MetadataRetrieve
Get the Z property of StageLabel.- Parameters:
imageIndex
- the Image index.- Returns:
- the Z property.
-
getTagAnnotationAnnotationRef
public java.lang.String getTagAnnotationAnnotationRef(int tagAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of TagAnnotation.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getTagAnnotationAnnotator
public java.lang.String getTagAnnotationAnnotator(int tagAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of TagAnnotation.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.- Returns:
- the Annotator property.
-
getTagAnnotationDescription
public java.lang.String getTagAnnotationDescription(int tagAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of TagAnnotation.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.- Returns:
- the Description property.
-
getTagAnnotationID
public java.lang.String getTagAnnotationID(int tagAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of TagAnnotation.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.- Returns:
- the ID property.
-
getTagAnnotationNamespace
public java.lang.String getTagAnnotationNamespace(int tagAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of TagAnnotation.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.- Returns:
- the Namespace property.
-
getTagAnnotationValue
public java.lang.String getTagAnnotationValue(int tagAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of TagAnnotation.- Parameters:
tagAnnotationIndex
- the TagAnnotation index.- Returns:
- the Value property.
-
getTermAnnotationAnnotationRef
public java.lang.String getTermAnnotationAnnotationRef(int termAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of TermAnnotation.- Parameters:
termAnnotationIndex
- the TermAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
-
getTermAnnotationAnnotator
public java.lang.String getTermAnnotationAnnotator(int termAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of TermAnnotation.- Parameters:
termAnnotationIndex
- the TermAnnotation index.- Returns:
- the Annotator property.
-
getTermAnnotationDescription
public java.lang.String getTermAnnotationDescription(int termAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of TermAnnotation.- Parameters:
termAnnotationIndex
- the TermAnnotation index.- Returns:
- the Description property.
-
getTermAnnotationID
public java.lang.String getTermAnnotationID(int termAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of TermAnnotation.- Parameters:
termAnnotationIndex
- the TermAnnotation index.- Returns:
- the ID property.
-
getTermAnnotationNamespace
public java.lang.String getTermAnnotationNamespace(int termAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of TermAnnotation.- Parameters:
termAnnotationIndex
- the TermAnnotation index.- Returns:
- the Namespace property.
-
getTermAnnotationValue
public java.lang.String getTermAnnotationValue(int termAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of TermAnnotation.- Parameters:
termAnnotationIndex
- the TermAnnotation index.- Returns:
- the Value property.
-
getTiffDataFirstC
Description copied from interface:MetadataRetrieve
Get the FirstC property of TiffData.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the FirstC property.
-
getTiffDataFirstT
Description copied from interface:MetadataRetrieve
Get the FirstT property of TiffData.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the FirstT property.
-
getTiffDataFirstZ
Description copied from interface:MetadataRetrieve
Get the FirstZ property of TiffData.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the FirstZ property.
-
getTiffDataIFD
Description copied from interface:MetadataRetrieve
Get the IFD property of TiffData.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the IFD property.
-
getTiffDataPlaneCount
Description copied from interface:MetadataRetrieve
Get the PlaneCount property of TiffData.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the PlaneCount property.
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getTimestampAnnotationAnnotationRef
public java.lang.String getTimestampAnnotationAnnotationRef(int timestampAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of TimestampAnnotation.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getTimestampAnnotationAnnotator
public java.lang.String getTimestampAnnotationAnnotator(int timestampAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of TimestampAnnotation.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.- Returns:
- the Annotator property.
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getTimestampAnnotationDescription
public java.lang.String getTimestampAnnotationDescription(int timestampAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of TimestampAnnotation.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.- Returns:
- the Description property.
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getTimestampAnnotationID
public java.lang.String getTimestampAnnotationID(int timestampAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of TimestampAnnotation.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.- Returns:
- the ID property.
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getTimestampAnnotationNamespace
public java.lang.String getTimestampAnnotationNamespace(int timestampAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of TimestampAnnotation.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.- Returns:
- the Namespace property.
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getTimestampAnnotationValue
Description copied from interface:MetadataRetrieve
Get the Value property of TimestampAnnotation.- Parameters:
timestampAnnotationIndex
- the TimestampAnnotation index.- Returns:
- the Value property.
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getTransmittanceRangeCutIn
Description copied from interface:MetadataRetrieve
Get the CutIn property of TransmittanceRange.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the CutIn property.
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getTransmittanceRangeCutInTolerance
Description copied from interface:MetadataRetrieve
Get the CutInTolerance property of TransmittanceRange.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the CutInTolerance property.
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getTransmittanceRangeCutOut
Description copied from interface:MetadataRetrieve
Get the CutOut property of TransmittanceRange.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the CutOut property.
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getTransmittanceRangeCutOutTolerance
Description copied from interface:MetadataRetrieve
Get the CutOutTolerance property of TransmittanceRange.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the CutOutTolerance property.
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getTransmittanceRangeTransmittance
Description copied from interface:MetadataRetrieve
Get the Transmittance property of TransmittanceRange.- Parameters:
instrumentIndex
- the Instrument index.filterIndex
- the Filter index.- Returns:
- the Transmittance property.
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getUUIDFileName
public java.lang.String getUUIDFileName(int imageIndex, int tiffDataIndex)Description copied from interface:MetadataRetrieve
Get the FileName property of UUID.- Parameters:
imageIndex
- the Image index.tiffDataIndex
- the TiffData index.- Returns:
- the FileName property.
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getWellAnnotationRef
public java.lang.String getWellAnnotationRef(int plateIndex, int wellIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getWellColor
Description copied from interface:MetadataRetrieve
Get the Color property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the Color property.
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getWellColumn
Description copied from interface:MetadataRetrieve
Get the Column property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the Column property.
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getWellExternalDescription
public java.lang.String getWellExternalDescription(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the ExternalDescription property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the ExternalDescription property.
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getWellExternalIdentifier
public java.lang.String getWellExternalIdentifier(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the ExternalIdentifier property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the ExternalIdentifier property.
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getWellID
public java.lang.String getWellID(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the ID property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the ID property.
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getWellReagentRef
public java.lang.String getWellReagentRef(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the ReagentRef property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the ReagentRef property.
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getWellRow
Description copied from interface:MetadataRetrieve
Get the Row property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the Row property.
-
getWellType
public java.lang.String getWellType(int plateIndex, int wellIndex)Description copied from interface:MetadataRetrieve
Get the Type property of Well.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.- Returns:
- the Type property.
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getWellSampleID
public java.lang.String getWellSampleID(int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataRetrieve
Get the ID property of WellSample.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.- Returns:
- the ID property.
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getWellSampleImageRef
public java.lang.String getWellSampleImageRef(int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataRetrieve
Get the ImageRef property of WellSample.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.- Returns:
- the ImageRef property.
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getWellSampleIndex
Description copied from interface:MetadataRetrieve
Get the Index property of WellSample.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.- Returns:
- the Index property.
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getWellSamplePositionX
Description copied from interface:MetadataRetrieve
Get the PositionX property of WellSample.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.- Returns:
- the PositionX property.
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getWellSamplePositionY
Description copied from interface:MetadataRetrieve
Get the PositionY property of WellSample.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.- Returns:
- the PositionY property.
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getWellSampleTimepoint
Description copied from interface:MetadataRetrieve
Get the Timepoint property of WellSample.- Parameters:
plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.- Returns:
- the Timepoint property.
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getXMLAnnotationAnnotationRef
public java.lang.String getXMLAnnotationAnnotationRef(int XMLAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataRetrieve
Get the AnnotationRef property of XMLAnnotation.- Parameters:
XMLAnnotationIndex
- the XMLAnnotation index.annotationRefIndex
- AnnotationRef index.- Returns:
- the AnnotationRef property.
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getXMLAnnotationAnnotator
public java.lang.String getXMLAnnotationAnnotator(int XMLAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Annotator property of XMLAnnotation.- Parameters:
XMLAnnotationIndex
- the XMLAnnotation index.- Returns:
- the Annotator property.
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getXMLAnnotationDescription
public java.lang.String getXMLAnnotationDescription(int XMLAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Description property of XMLAnnotation.- Parameters:
XMLAnnotationIndex
- the XMLAnnotation index.- Returns:
- the Description property.
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getXMLAnnotationID
public java.lang.String getXMLAnnotationID(int XMLAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the ID property of XMLAnnotation.- Parameters:
XMLAnnotationIndex
- the XMLAnnotation index.- Returns:
- the ID property.
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getXMLAnnotationNamespace
public java.lang.String getXMLAnnotationNamespace(int XMLAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Namespace property of XMLAnnotation.- Parameters:
XMLAnnotationIndex
- the XMLAnnotation index.- Returns:
- the Namespace property.
-
getXMLAnnotationValue
public java.lang.String getXMLAnnotationValue(int XMLAnnotationIndex)Description copied from interface:MetadataRetrieve
Get the Value property of XMLAnnotation.- Parameters:
XMLAnnotationIndex
- the XMLAnnotation index.- Returns:
- the Value property.
-
setUUID
public void setUUID(java.lang.String uuid)Sets the UUID associated with this collection of metadata.- Parameters:
uuid
- the UUID to set.
-
setCreator
public void setCreator(java.lang.String creator)Sets the Creator associated with this collection of metadata.- Parameters:
creator
- the Creator to set.
-
setMapAnnotationValue
Sets the Map value associated with this annotation- Parameters:
value
- the MapAnnotation values to set.mapAnnotationIndex
- the MapAnnotation index.
-
setGenericExcitationSourceMap
public void setGenericExcitationSourceMap(java.util.List<MapPair> map, int instrumentIndex, int lightSourceIndex)Sets the Map value associated with this generic light source- Parameters:
map
- the MapAnnotation values to set.instrumentIndex
- the Instrument index.
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setImagingEnvironmentMap
Sets the Map value associated with this imaging environment- Parameters:
map
- the MapAnnotation values to set.imageIndex
- the Image index.
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setArcAnnotationRef
public void setArcAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Arc.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index (unused).
-
setArcID
public void setArcID(java.lang.String id, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the ID property of Arc.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
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setArcLotNumber
public void setArcLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Arc.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setArcManufacturer
public void setArcManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Arc.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setArcModel
public void setArcModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Model property of Arc.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setArcPower
Description copied from interface:MetadataStore
Set the Power property of Arc.- Parameters:
power
- Power to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setArcSerialNumber
public void setArcSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Arc.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setArcType
Description copied from interface:MetadataStore
Set the Type property of Arc.- Parameters:
type
- Type to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setBinaryFileBinData
public void setBinaryFileBinData(byte[] base64Binary, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the Base64Binary property of BinData.- Parameters:
base64Binary
- Base64Binary to set.fileAnnotationIndex
- the FileAnnotation index.
-
setMaskBinData
public void setMaskBinData(byte[] base64Binary, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Base64Binary property of BinData.- Parameters:
base64Binary
- Base64Binary to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setPixelsBinData
public void setPixelsBinData(byte[] base64Binary, int imageIndex, int binDataIndex)Description copied from interface:MetadataStore
Set the Base64Binary property of BinData.- Parameters:
base64Binary
- Base64Binary to set.imageIndex
- the Image index.binDataIndex
- the BinData index.
-
setBinaryFileBinDataBigEndian
public void setBinaryFileBinDataBigEndian(java.lang.Boolean bigEndian, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the BigEndian property of BinData.- Parameters:
bigEndian
- BigEndian to set.fileAnnotationIndex
- the FileAnnotation index.
-
setMaskBinDataBigEndian
public void setMaskBinDataBigEndian(java.lang.Boolean bigEndian, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the BigEndian property of BinData.- Parameters:
bigEndian
- BigEndian to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPixelsBinDataBigEndian
public void setPixelsBinDataBigEndian(java.lang.Boolean bigEndian, int imageIndex, int binDataIndex)Description copied from interface:MetadataStore
Set the BigEndian property of BinData.- Parameters:
bigEndian
- BigEndian to set.imageIndex
- the Image index.binDataIndex
- the BinData index.
-
setBinaryFileBinDataCompression
Description copied from interface:MetadataStore
Set the Compression property of BinData.- Parameters:
compression
- Compression to set.fileAnnotationIndex
- the FileAnnotation index.
-
setMaskBinDataCompression
Description copied from interface:MetadataStore
Set the Compression property of BinData.- Parameters:
compression
- Compression to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPixelsBinDataCompression
Description copied from interface:MetadataStore
Set the Compression property of BinData.- Parameters:
compression
- Compression to set.imageIndex
- the Image index.binDataIndex
- the BinData index.
-
setBinaryFileBinDataLength
Description copied from interface:MetadataStore
Set the Length property of BinData.- Parameters:
length
- Length to set.fileAnnotationIndex
- the FileAnnotation index.
-
setMaskBinDataLength
Description copied from interface:MetadataStore
Set the Length property of BinData.- Parameters:
length
- Length to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPixelsBinDataLength
Description copied from interface:MetadataStore
Set the Length property of BinData.- Parameters:
length
- Length to set.imageIndex
- the Image index.binDataIndex
- the BinData index.
-
setBinaryFileFileName
public void setBinaryFileFileName(java.lang.String fileName, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the FileName property of BinaryFile.- Parameters:
fileName
- FileName to set.fileAnnotationIndex
- the FileAnnotation index.
-
setBinaryFileMIMEType
public void setBinaryFileMIMEType(java.lang.String mimeType, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the MIMEType property of BinaryFile.- Parameters:
mimeType
- MIMEType to set.fileAnnotationIndex
- the FileAnnotation index.
-
setBinaryFileSize
Description copied from interface:MetadataStore
Set the Size property of BinaryFile.- Parameters:
size
- Size to set.fileAnnotationIndex
- the FileAnnotation index.
-
setBinaryOnlyMetadataFile
public void setBinaryOnlyMetadataFile(java.lang.String metadataFile)Description copied from interface:MetadataStore
Set the MetadataFile property of BinaryOnly.- Parameters:
metadataFile
- MetadataFile to set.
-
setBinaryOnlyUUID
public void setBinaryOnlyUUID(java.lang.String uuid)Description copied from interface:MetadataStore
Set the UUID property of BinaryOnly.- Parameters:
uuid
- UUID to set.
-
setBooleanAnnotationAnnotationRef
public void setBooleanAnnotationAnnotationRef(java.lang.String annotation, int booleanAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of BooleanAnnotation.- Parameters:
annotation
- AnnotationRef to set.booleanAnnotationIndex
- the BooleanAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setBooleanAnnotationAnnotator
public void setBooleanAnnotationAnnotator(java.lang.String annotator, int booleanAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of BooleanAnnotation.- Parameters:
annotator
- Annotator to set.booleanAnnotationIndex
- the BooleanAnnotation index.
-
setBooleanAnnotationDescription
public void setBooleanAnnotationDescription(java.lang.String description, int booleanAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of BooleanAnnotation.- Parameters:
description
- Description to set.booleanAnnotationIndex
- the BooleanAnnotation index.
-
setBooleanAnnotationID
public void setBooleanAnnotationID(java.lang.String id, int booleanAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of BooleanAnnotation.- Parameters:
id
- ID to set.booleanAnnotationIndex
- the BooleanAnnotation index.
-
setBooleanAnnotationNamespace
public void setBooleanAnnotationNamespace(java.lang.String namespace, int booleanAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of BooleanAnnotation.- Parameters:
namespace
- Namespace to set.booleanAnnotationIndex
- the BooleanAnnotation index.
-
setBooleanAnnotationValue
public void setBooleanAnnotationValue(java.lang.Boolean value, int booleanAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of BooleanAnnotation.- Parameters:
value
- Value to set.booleanAnnotationIndex
- the BooleanAnnotation index.
-
setChannelAcquisitionMode
public void setChannelAcquisitionMode(AcquisitionMode acquisitionMode, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the AcquisitionMode property of Channel.- Parameters:
acquisitionMode
- AcquisitionMode to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelAnnotationRef
public void setChannelAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Channel.- Parameters:
annotation
- AnnotationRef to set.imageIndex
- the Image index.channelIndex
- the Channel index.annotationRefIndex
- AnnotationRef index (unused).
-
setChannelColor
Description copied from interface:MetadataStore
Set the Color property of Channel.- Parameters:
color
- Color to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelContrastMethod
public void setChannelContrastMethod(ContrastMethod contrastMethod, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the ContrastMethod property of Channel.- Parameters:
contrastMethod
- ContrastMethod to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelEmissionWavelength
public void setChannelEmissionWavelength(Length emissionWavelength, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the EmissionWavelength property of Channel.- Parameters:
emissionWavelength
- EmissionWavelength to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelExcitationWavelength
public void setChannelExcitationWavelength(Length excitationWavelength, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the ExcitationWavelength property of Channel.- Parameters:
excitationWavelength
- ExcitationWavelength to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelFilterSetRef
public void setChannelFilterSetRef(java.lang.String filterSet, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the FilterSetRef property of Channel.- Parameters:
filterSet
- FilterSetRef to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelFluor
public void setChannelFluor(java.lang.String fluor, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Fluor property of Channel.- Parameters:
fluor
- Fluor to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelID
public void setChannelID(java.lang.String id, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the ID property of Channel.- Parameters:
id
- ID to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelIlluminationType
public void setChannelIlluminationType(IlluminationType illuminationType, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the IlluminationType property of Channel.- Parameters:
illuminationType
- IlluminationType to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelNDFilter
public void setChannelNDFilter(java.lang.Double ndFilter, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the NDFilter property of Channel.- Parameters:
ndFilter
- NDFilter to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelName
public void setChannelName(java.lang.String name, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Name property of Channel.- Parameters:
name
- Name to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelPinholeSize
Description copied from interface:MetadataStore
Set the PinholeSize property of Channel.- Parameters:
pinholeSize
- PinholeSize to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelPockelCellSetting
public void setChannelPockelCellSetting(java.lang.Integer pockelCellSetting, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the PockelCellSetting property of Channel.- Parameters:
pockelCellSetting
- PockelCellSetting to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setChannelSamplesPerPixel
public void setChannelSamplesPerPixel(PositiveInteger samplesPerPixel, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the SamplesPerPixel property of Channel.- Parameters:
samplesPerPixel
- SamplesPerPixel to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setCommentAnnotationAnnotationRef
public void setCommentAnnotationAnnotationRef(java.lang.String annotation, int commentAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of CommentAnnotation.- Parameters:
annotation
- AnnotationRef to set.commentAnnotationIndex
- the CommentAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setCommentAnnotationAnnotator
public void setCommentAnnotationAnnotator(java.lang.String annotator, int commentAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of CommentAnnotation.- Parameters:
annotator
- Annotator to set.commentAnnotationIndex
- the CommentAnnotation index.
-
setCommentAnnotationDescription
public void setCommentAnnotationDescription(java.lang.String description, int commentAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of CommentAnnotation.- Parameters:
description
- Description to set.commentAnnotationIndex
- the CommentAnnotation index.
-
setCommentAnnotationID
public void setCommentAnnotationID(java.lang.String id, int commentAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of CommentAnnotation.- Parameters:
id
- ID to set.commentAnnotationIndex
- the CommentAnnotation index.
-
setCommentAnnotationNamespace
public void setCommentAnnotationNamespace(java.lang.String namespace, int commentAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of CommentAnnotation.- Parameters:
namespace
- Namespace to set.commentAnnotationIndex
- the CommentAnnotation index.
-
setCommentAnnotationValue
public void setCommentAnnotationValue(java.lang.String value, int commentAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of CommentAnnotation.- Parameters:
value
- Value to set.commentAnnotationIndex
- the CommentAnnotation index.
-
setDatasetAnnotationRef
public void setDatasetAnnotationRef(java.lang.String annotation, int datasetIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Dataset.- Parameters:
annotation
- AnnotationRef to set.datasetIndex
- the Dataset index.annotationRefIndex
- AnnotationRef index (unused).
-
setDatasetDescription
public void setDatasetDescription(java.lang.String description, int datasetIndex)Description copied from interface:MetadataStore
Set the Description property of Dataset.- Parameters:
description
- Description to set.datasetIndex
- the Dataset index.
-
setDatasetExperimenterGroupRef
public void setDatasetExperimenterGroupRef(java.lang.String experimenterGroup, int datasetIndex)Description copied from interface:MetadataStore
Set the ExperimenterGroupRef property of Dataset.- Parameters:
experimenterGroup
- ExperimenterGroupRef to set.datasetIndex
- the Dataset index.
-
setDatasetExperimenterRef
public void setDatasetExperimenterRef(java.lang.String experimenter, int datasetIndex)Description copied from interface:MetadataStore
Set the ExperimenterRef property of Dataset.- Parameters:
experimenter
- ExperimenterRef to set.datasetIndex
- the Dataset index.
-
setDatasetID
public void setDatasetID(java.lang.String id, int datasetIndex)Description copied from interface:MetadataStore
Set the ID property of Dataset.- Parameters:
id
- ID to set.datasetIndex
- the Dataset index.
-
setDatasetImageRef
public void setDatasetImageRef(java.lang.String image, int datasetIndex, int imageRefIndex)Description copied from interface:MetadataStore
Set the ImageRef property of Dataset.- Parameters:
image
- ImageRef to set.datasetIndex
- the Dataset index.imageRefIndex
- ImageRef index (unused).
-
setDatasetName
public void setDatasetName(java.lang.String name, int datasetIndex)Description copied from interface:MetadataStore
Set the Name property of Dataset.- Parameters:
name
- Name to set.datasetIndex
- the Dataset index.
-
setDetectorAmplificationGain
public void setDetectorAmplificationGain(java.lang.Double amplificationGain, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the AmplificationGain property of Detector.- Parameters:
amplificationGain
- AmplificationGain to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorAnnotationRef
public void setDetectorAnnotationRef(java.lang.String annotation, int instrumentIndex, int detectorIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Detector.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.annotationRefIndex
- AnnotationRef index (unused).
-
setDetectorGain
public void setDetectorGain(java.lang.Double gain, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the Gain property of Detector.- Parameters:
gain
- Gain to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorID
public void setDetectorID(java.lang.String id, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the ID property of Detector.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorLotNumber
public void setDetectorLotNumber(java.lang.String lotNumber, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Detector.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorManufacturer
public void setDetectorManufacturer(java.lang.String manufacturer, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Detector.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorModel
public void setDetectorModel(java.lang.String model, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the Model property of Detector.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorOffset
public void setDetectorOffset(java.lang.Double offset, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the Offset property of Detector.- Parameters:
offset
- Offset to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
-
setDetectorSerialNumber
public void setDetectorSerialNumber(java.lang.String serialNumber, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Detector.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
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setDetectorType
Description copied from interface:MetadataStore
Set the Type property of Detector.- Parameters:
type
- Type to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
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setDetectorVoltage
Description copied from interface:MetadataStore
Set the Voltage property of Detector.- Parameters:
voltage
- Voltage to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
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setDetectorZoom
public void setDetectorZoom(java.lang.Double zoom, int instrumentIndex, int detectorIndex)Description copied from interface:MetadataStore
Set the Zoom property of Detector.- Parameters:
zoom
- Zoom to set.instrumentIndex
- the Instrument index.detectorIndex
- the Detector index.
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setDetectorSettingsBinning
Description copied from interface:MetadataStore
Set the Binning property of DetectorSettings.- Parameters:
binning
- Binning to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsGain
public void setDetectorSettingsGain(java.lang.Double gain, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Gain property of DetectorSettings.- Parameters:
gain
- Gain to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsID
public void setDetectorSettingsID(java.lang.String id, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the ID property of DetectorSettings.- Parameters:
id
- ID to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsIntegration
public void setDetectorSettingsIntegration(PositiveInteger integration, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Integration property of DetectorSettings.- Parameters:
integration
- Integration to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsOffset
public void setDetectorSettingsOffset(java.lang.Double offset, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Offset property of DetectorSettings.- Parameters:
offset
- Offset to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsReadOutRate
public void setDetectorSettingsReadOutRate(Frequency readOutRate, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the ReadOutRate property of DetectorSettings.- Parameters:
readOutRate
- ReadOutRate to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsVoltage
public void setDetectorSettingsVoltage(ElectricPotential voltage, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Voltage property of DetectorSettings.- Parameters:
voltage
- Voltage to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDetectorSettingsZoom
public void setDetectorSettingsZoom(java.lang.Double zoom, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Zoom property of DetectorSettings.- Parameters:
zoom
- Zoom to set.imageIndex
- the Image index.channelIndex
- the Channel index.
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setDichroicAnnotationRef
public void setDichroicAnnotationRef(java.lang.String annotation, int instrumentIndex, int dichroicIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Dichroic.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.annotationRefIndex
- AnnotationRef index (unused).
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setDichroicID
public void setDichroicID(java.lang.String id, int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataStore
Set the ID property of Dichroic.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.
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setDichroicLotNumber
public void setDichroicLotNumber(java.lang.String lotNumber, int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Dichroic.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.
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setDichroicManufacturer
public void setDichroicManufacturer(java.lang.String manufacturer, int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Dichroic.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.
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setDichroicModel
public void setDichroicModel(java.lang.String model, int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataStore
Set the Model property of Dichroic.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.
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setDichroicSerialNumber
public void setDichroicSerialNumber(java.lang.String serialNumber, int instrumentIndex, int dichroicIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Dichroic.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.dichroicIndex
- the Dichroic index.
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setDoubleAnnotationAnnotationRef
public void setDoubleAnnotationAnnotationRef(java.lang.String annotation, int doubleAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of DoubleAnnotation.- Parameters:
annotation
- AnnotationRef to set.doubleAnnotationIndex
- the DoubleAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
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setDoubleAnnotationAnnotator
public void setDoubleAnnotationAnnotator(java.lang.String annotator, int doubleAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of DoubleAnnotation.- Parameters:
annotator
- Annotator to set.doubleAnnotationIndex
- the DoubleAnnotation index.
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setDoubleAnnotationDescription
public void setDoubleAnnotationDescription(java.lang.String description, int doubleAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of DoubleAnnotation.- Parameters:
description
- Description to set.doubleAnnotationIndex
- the DoubleAnnotation index.
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setDoubleAnnotationID
public void setDoubleAnnotationID(java.lang.String id, int doubleAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of DoubleAnnotation.- Parameters:
id
- ID to set.doubleAnnotationIndex
- the DoubleAnnotation index.
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setDoubleAnnotationNamespace
public void setDoubleAnnotationNamespace(java.lang.String namespace, int doubleAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of DoubleAnnotation.- Parameters:
namespace
- Namespace to set.doubleAnnotationIndex
- the DoubleAnnotation index.
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setDoubleAnnotationValue
public void setDoubleAnnotationValue(java.lang.Double value, int doubleAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of DoubleAnnotation.- Parameters:
value
- Value to set.doubleAnnotationIndex
- the DoubleAnnotation index.
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setEllipseAnnotationRef
public void setEllipseAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Ellipse.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
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setEllipseFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Ellipse.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Ellipse.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Ellipse.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Ellipse.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Ellipse.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseID
public void setEllipseID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Ellipse.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseLocked
public void setEllipseLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Ellipse.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseRadiusX
public void setEllipseRadiusX(java.lang.Double radiusX, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the RadiusX property of Ellipse.- Parameters:
radiusX
- RadiusX to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseRadiusY
public void setEllipseRadiusY(java.lang.Double radiusY, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the RadiusY property of Ellipse.- Parameters:
radiusY
- RadiusY to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Ellipse.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseStrokeDashArray
public void setEllipseStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Ellipse.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Ellipse.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseText
public void setEllipseText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Ellipse.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseTheC
Description copied from interface:MetadataStore
Set the TheC property of Ellipse.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseTheT
Description copied from interface:MetadataStore
Set the TheT property of Ellipse.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Ellipse.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setEllipseTransform
Description copied from interface:MetadataStore
Set the Transform property of Ellipse.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseX
public void setEllipseX(java.lang.Double x, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X property of Ellipse.- Parameters:
x
- X to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setEllipseY
public void setEllipseY(java.lang.Double y, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y property of Ellipse.- Parameters:
y
- Y to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setExperimentDescription
public void setExperimentDescription(java.lang.String description, int experimentIndex)Description copied from interface:MetadataStore
Set the Description property of Experiment.- Parameters:
description
- Description to set.experimentIndex
- the Experiment index.
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setExperimentExperimenterRef
public void setExperimentExperimenterRef(java.lang.String experimenter, int experimentIndex)Description copied from interface:MetadataStore
Set the ExperimenterRef property of Experiment.- Parameters:
experimenter
- ExperimenterRef to set.experimentIndex
- the Experiment index.
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setExperimentID
public void setExperimentID(java.lang.String id, int experimentIndex)Description copied from interface:MetadataStore
Set the ID property of Experiment.- Parameters:
id
- ID to set.experimentIndex
- the Experiment index.
-
setExperimentType
Description copied from interface:MetadataStore
Set the Type property of Experiment.- Parameters:
type
- Type to set.experimentIndex
- the Experiment index.
-
setExperimenterAnnotationRef
public void setExperimenterAnnotationRef(java.lang.String annotation, int experimenterIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Experimenter.- Parameters:
annotation
- AnnotationRef to set.experimenterIndex
- the Experimenter index.annotationRefIndex
- AnnotationRef index (unused).
-
setExperimenterEmail
public void setExperimenterEmail(java.lang.String email, int experimenterIndex)Description copied from interface:MetadataStore
Set the Email property of Experimenter.- Parameters:
email
- Email to set.experimenterIndex
- the Experimenter index.
-
setExperimenterFirstName
public void setExperimenterFirstName(java.lang.String firstName, int experimenterIndex)Description copied from interface:MetadataStore
Set the FirstName property of Experimenter.- Parameters:
firstName
- FirstName to set.experimenterIndex
- the Experimenter index.
-
setExperimenterID
public void setExperimenterID(java.lang.String id, int experimenterIndex)Description copied from interface:MetadataStore
Set the ID property of Experimenter.- Parameters:
id
- ID to set.experimenterIndex
- the Experimenter index.
-
setExperimenterInstitution
public void setExperimenterInstitution(java.lang.String institution, int experimenterIndex)Description copied from interface:MetadataStore
Set the Institution property of Experimenter.- Parameters:
institution
- Institution to set.experimenterIndex
- the Experimenter index.
-
setExperimenterLastName
public void setExperimenterLastName(java.lang.String lastName, int experimenterIndex)Description copied from interface:MetadataStore
Set the LastName property of Experimenter.- Parameters:
lastName
- LastName to set.experimenterIndex
- the Experimenter index.
-
setExperimenterMiddleName
public void setExperimenterMiddleName(java.lang.String middleName, int experimenterIndex)Description copied from interface:MetadataStore
Set the MiddleName property of Experimenter.- Parameters:
middleName
- MiddleName to set.experimenterIndex
- the Experimenter index.
-
setExperimenterUserName
public void setExperimenterUserName(java.lang.String userName, int experimenterIndex)Description copied from interface:MetadataStore
Set the UserName property of Experimenter.- Parameters:
userName
- UserName to set.experimenterIndex
- the Experimenter index.
-
setExperimenterGroupAnnotationRef
public void setExperimenterGroupAnnotationRef(java.lang.String annotation, int experimenterGroupIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of ExperimenterGroup.- Parameters:
annotation
- AnnotationRef to set.experimenterGroupIndex
- the ExperimenterGroup index.annotationRefIndex
- AnnotationRef index (unused).
-
setExperimenterGroupDescription
public void setExperimenterGroupDescription(java.lang.String description, int experimenterGroupIndex)Description copied from interface:MetadataStore
Set the Description property of ExperimenterGroup.- Parameters:
description
- Description to set.experimenterGroupIndex
- the ExperimenterGroup index.
-
setExperimenterGroupExperimenterRef
public void setExperimenterGroupExperimenterRef(java.lang.String experimenter, int experimenterGroupIndex, int experimenterRefIndex)Description copied from interface:MetadataStore
Set the ExperimenterRef property of ExperimenterGroup.- Parameters:
experimenter
- ExperimenterRef to set.experimenterGroupIndex
- the ExperimenterGroup index.experimenterRefIndex
- ExperimenterRef index (unused).
-
setExperimenterGroupID
public void setExperimenterGroupID(java.lang.String id, int experimenterGroupIndex)Description copied from interface:MetadataStore
Set the ID property of ExperimenterGroup.- Parameters:
id
- ID to set.experimenterGroupIndex
- the ExperimenterGroup index.
-
setExperimenterGroupLeader
public void setExperimenterGroupLeader(java.lang.String leader, int experimenterGroupIndex, int leaderIndex)Description copied from interface:MetadataStore
Set the Leader property of ExperimenterGroup.- Parameters:
leader
- Leader to set.experimenterGroupIndex
- the ExperimenterGroup index.leaderIndex
- Leader index (unused).
-
setExperimenterGroupName
public void setExperimenterGroupName(java.lang.String name, int experimenterGroupIndex)Description copied from interface:MetadataStore
Set the Name property of ExperimenterGroup.- Parameters:
name
- Name to set.experimenterGroupIndex
- the ExperimenterGroup index.
-
setFilamentAnnotationRef
public void setFilamentAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Filament.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index (unused).
-
setFilamentID
public void setFilamentID(java.lang.String id, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the ID property of Filament.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFilamentLotNumber
public void setFilamentLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Filament.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFilamentManufacturer
public void setFilamentManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Filament.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFilamentModel
public void setFilamentModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Model property of Filament.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFilamentPower
Description copied from interface:MetadataStore
Set the Power property of Filament.- Parameters:
power
- Power to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFilamentSerialNumber
public void setFilamentSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Filament.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFilamentType
Description copied from interface:MetadataStore
Set the Type property of Filament.- Parameters:
type
- Type to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setFileAnnotationAnnotationRef
public void setFileAnnotationAnnotationRef(java.lang.String annotation, int fileAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of FileAnnotation.- Parameters:
annotation
- AnnotationRef to set.fileAnnotationIndex
- the FileAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setFileAnnotationAnnotator
public void setFileAnnotationAnnotator(java.lang.String annotator, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of FileAnnotation.- Parameters:
annotator
- Annotator to set.fileAnnotationIndex
- the FileAnnotation index.
-
setFileAnnotationDescription
public void setFileAnnotationDescription(java.lang.String description, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of FileAnnotation.- Parameters:
description
- Description to set.fileAnnotationIndex
- the FileAnnotation index.
-
setFileAnnotationID
public void setFileAnnotationID(java.lang.String id, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of FileAnnotation.- Parameters:
id
- ID to set.fileAnnotationIndex
- the FileAnnotation index.
-
setFileAnnotationNamespace
public void setFileAnnotationNamespace(java.lang.String namespace, int fileAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of FileAnnotation.- Parameters:
namespace
- Namespace to set.fileAnnotationIndex
- the FileAnnotation index.
-
setFilterAnnotationRef
public void setFilterAnnotationRef(java.lang.String annotation, int instrumentIndex, int filterIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Filter.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.annotationRefIndex
- AnnotationRef index (unused).
-
setFilterFilterWheel
public void setFilterFilterWheel(java.lang.String filterWheel, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the FilterWheel property of Filter.- Parameters:
filterWheel
- FilterWheel to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterID
public void setFilterID(java.lang.String id, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the ID property of Filter.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterLotNumber
public void setFilterLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Filter.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterManufacturer
public void setFilterManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Filter.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterModel
public void setFilterModel(java.lang.String model, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the Model property of Filter.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterSerialNumber
public void setFilterSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Filter.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterType
Description copied from interface:MetadataStore
Set the Type property of Filter.- Parameters:
type
- Type to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
-
setFilterSetDichroicRef
public void setFilterSetDichroicRef(java.lang.String dichroic, int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataStore
Set the DichroicRef property of FilterSet.- Parameters:
dichroic
- DichroicRef to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.
-
setFilterSetEmissionFilterRef
public void setFilterSetEmissionFilterRef(java.lang.String emissionFilter, int instrumentIndex, int filterSetIndex, int emissionFilterRefIndex)Description copied from interface:MetadataStore
Set the EmissionFilterRef property of FilterSet.- Parameters:
emissionFilter
- EmissionFilterRef to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.emissionFilterRefIndex
- EmissionFilterRef index (unused).
-
setFilterSetExcitationFilterRef
public void setFilterSetExcitationFilterRef(java.lang.String excitationFilter, int instrumentIndex, int filterSetIndex, int excitationFilterRefIndex)Description copied from interface:MetadataStore
Set the ExcitationFilterRef property of FilterSet.- Parameters:
excitationFilter
- ExcitationFilterRef to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.excitationFilterRefIndex
- ExcitationFilterRef index (unused).
-
setFilterSetID
public void setFilterSetID(java.lang.String id, int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataStore
Set the ID property of FilterSet.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.
-
setFilterSetLotNumber
public void setFilterSetLotNumber(java.lang.String lotNumber, int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataStore
Set the LotNumber property of FilterSet.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.
-
setFilterSetManufacturer
public void setFilterSetManufacturer(java.lang.String manufacturer, int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of FilterSet.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.
-
setFilterSetModel
public void setFilterSetModel(java.lang.String model, int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataStore
Set the Model property of FilterSet.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.
-
setFilterSetSerialNumber
public void setFilterSetSerialNumber(java.lang.String serialNumber, int instrumentIndex, int filterSetIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of FilterSet.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.filterSetIndex
- the FilterSet index.
-
setFolderAnnotationRef
public void setFolderAnnotationRef(java.lang.String annotation, int folderIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Folder.- Parameters:
annotation
- AnnotationRef to set.folderIndex
- the Folder index.annotationRefIndex
- AnnotationRef index (unused).
-
setFolderDescription
public void setFolderDescription(java.lang.String description, int folderIndex)Description copied from interface:MetadataStore
Set the Description property of Folder.- Parameters:
description
- Description to set.folderIndex
- the Folder index.
-
setFolderFolderRef
public void setFolderFolderRef(java.lang.String folder, int folderIndex, int folderRefIndex)Description copied from interface:MetadataStore
Set the FolderRef property of Folder.- Parameters:
folder
- FolderRef to set.folderIndex
- the Folder index.folderRefIndex
- FolderRef index (unused).
-
setFolderID
public void setFolderID(java.lang.String id, int folderIndex)Description copied from interface:MetadataStore
Set the ID property of Folder.- Parameters:
id
- ID to set.folderIndex
- the Folder index.
-
setFolderImageRef
public void setFolderImageRef(java.lang.String image, int folderIndex, int imageRefIndex)Description copied from interface:MetadataStore
Set the ImageRef property of Folder.- Parameters:
image
- ImageRef to set.folderIndex
- the Folder index.imageRefIndex
- ImageRef index (unused).
-
setFolderName
public void setFolderName(java.lang.String name, int folderIndex)Description copied from interface:MetadataStore
Set the Name property of Folder.- Parameters:
name
- Name to set.folderIndex
- the Folder index.
-
setFolderROIRef
public void setFolderROIRef(java.lang.String roi, int folderIndex, int ROIRefIndex)Description copied from interface:MetadataStore
Set the ROIRef property of Folder.- Parameters:
roi
- ROIRef to set.folderIndex
- the Folder index.ROIRefIndex
- ROIRef index (unused).
-
setGenericExcitationSourceAnnotationRef
public void setGenericExcitationSourceAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of GenericExcitationSource.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index (unused).
-
setGenericExcitationSourceID
public void setGenericExcitationSourceID(java.lang.String id, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the ID property of GenericExcitationSource.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setGenericExcitationSourceLotNumber
public void setGenericExcitationSourceLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the LotNumber property of GenericExcitationSource.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setGenericExcitationSourceManufacturer
public void setGenericExcitationSourceManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of GenericExcitationSource.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setGenericExcitationSourceModel
public void setGenericExcitationSourceModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Model property of GenericExcitationSource.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setGenericExcitationSourcePower
public void setGenericExcitationSourcePower(Power power, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Power property of GenericExcitationSource.- Parameters:
power
- Power to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setGenericExcitationSourceSerialNumber
public void setGenericExcitationSourceSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of GenericExcitationSource.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setImageAcquisitionDate
Description copied from interface:MetadataStore
Set the AcquisitionDate property of Image.- Parameters:
acquisitionDate
- AcquisitionDate to set.imageIndex
- the Image index.
-
setImageAnnotationRef
public void setImageAnnotationRef(java.lang.String annotation, int imageIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Image.- Parameters:
annotation
- AnnotationRef to set.imageIndex
- the Image index.annotationRefIndex
- AnnotationRef index (unused).
-
setImageDescription
public void setImageDescription(java.lang.String description, int imageIndex)Description copied from interface:MetadataStore
Set the Description property of Image.- Parameters:
description
- Description to set.imageIndex
- the Image index.
-
setImageExperimentRef
public void setImageExperimentRef(java.lang.String experiment, int imageIndex)Description copied from interface:MetadataStore
Set the ExperimentRef property of Image.- Parameters:
experiment
- ExperimentRef to set.imageIndex
- the Image index.
-
setImageExperimenterGroupRef
public void setImageExperimenterGroupRef(java.lang.String experimenterGroup, int imageIndex)Description copied from interface:MetadataStore
Set the ExperimenterGroupRef property of Image.- Parameters:
experimenterGroup
- ExperimenterGroupRef to set.imageIndex
- the Image index.
-
setImageExperimenterRef
public void setImageExperimenterRef(java.lang.String experimenter, int imageIndex)Description copied from interface:MetadataStore
Set the ExperimenterRef property of Image.- Parameters:
experimenter
- ExperimenterRef to set.imageIndex
- the Image index.
-
setImageID
public void setImageID(java.lang.String id, int imageIndex)Description copied from interface:MetadataStore
Set the ID property of Image.- Parameters:
id
- ID to set.imageIndex
- the Image index.
-
setImageInstrumentRef
public void setImageInstrumentRef(java.lang.String instrument, int imageIndex)Description copied from interface:MetadataStore
Set the InstrumentRef property of Image.- Parameters:
instrument
- InstrumentRef to set.imageIndex
- the Image index.
-
setImageMicrobeamManipulationRef
public void setImageMicrobeamManipulationRef(java.lang.String microbeamManipulation, int imageIndex, int microbeamManipulationRefIndex)Description copied from interface:MetadataStore
Set the MicrobeamManipulationRef property of Image.- Parameters:
microbeamManipulation
- MicrobeamManipulationRef to set.imageIndex
- the Image index.microbeamManipulationRefIndex
- MicrobeamManipulationRef index (unused).
-
setImageName
public void setImageName(java.lang.String name, int imageIndex)Description copied from interface:MetadataStore
Set the Name property of Image.- Parameters:
name
- Name to set.imageIndex
- the Image index.
-
setImageROIRef
public void setImageROIRef(java.lang.String roi, int imageIndex, int ROIRefIndex)Description copied from interface:MetadataStore
Set the ROIRef property of Image.- Parameters:
roi
- ROIRef to set.imageIndex
- the Image index.ROIRefIndex
- ROIRef index (unused).
-
setImagingEnvironmentAirPressure
Description copied from interface:MetadataStore
Set the AirPressure property of ImagingEnvironment.- Parameters:
airPressure
- AirPressure to set.imageIndex
- the Image index.
-
setImagingEnvironmentCO2Percent
Description copied from interface:MetadataStore
Set the CO2Percent property of ImagingEnvironment.- Parameters:
co2Percent
- CO2Percent to set.imageIndex
- the Image index.
-
setImagingEnvironmentHumidity
Description copied from interface:MetadataStore
Set the Humidity property of ImagingEnvironment.- Parameters:
humidity
- Humidity to set.imageIndex
- the Image index.
-
setImagingEnvironmentTemperature
Description copied from interface:MetadataStore
Set the Temperature property of ImagingEnvironment.- Parameters:
temperature
- Temperature to set.imageIndex
- the Image index.
-
setInstrumentAnnotationRef
public void setInstrumentAnnotationRef(java.lang.String annotation, int instrumentIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Instrument.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.annotationRefIndex
- AnnotationRef index (unused).
-
setInstrumentID
public void setInstrumentID(java.lang.String id, int instrumentIndex)Description copied from interface:MetadataStore
Set the ID property of Instrument.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.
-
setLabelAnnotationRef
public void setLabelAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Label.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setLabelFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Label.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Label.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Label.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Label.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Label.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelID
public void setLabelID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Label.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelLocked
public void setLabelLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Label.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Label.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelStrokeDashArray
public void setLabelStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Label.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Label.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelText
public void setLabelText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Label.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelTheC
Description copied from interface:MetadataStore
Set the TheC property of Label.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelTheT
Description copied from interface:MetadataStore
Set the TheT property of Label.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Label.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelTransform
Description copied from interface:MetadataStore
Set the Transform property of Label.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelX
public void setLabelX(java.lang.Double x, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X property of Label.- Parameters:
x
- X to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLabelY
public void setLabelY(java.lang.Double y, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y property of Label.- Parameters:
y
- Y to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLaserAnnotationRef
public void setLaserAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Laser.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index (unused).
-
setLaserFrequencyMultiplication
public void setLaserFrequencyMultiplication(PositiveInteger frequencyMultiplication, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the FrequencyMultiplication property of Laser.- Parameters:
frequencyMultiplication
- FrequencyMultiplication to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserID
public void setLaserID(java.lang.String id, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the ID property of Laser.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserLaserMedium
public void setLaserLaserMedium(LaserMedium laserMedium, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the LaserMedium property of Laser.- Parameters:
laserMedium
- LaserMedium to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserLotNumber
public void setLaserLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Laser.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserManufacturer
public void setLaserManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Laser.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserModel
public void setLaserModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Model property of Laser.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserPockelCell
public void setLaserPockelCell(java.lang.Boolean pockelCell, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the PockelCell property of Laser.- Parameters:
pockelCell
- PockelCell to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserPower
Description copied from interface:MetadataStore
Set the Power property of Laser.- Parameters:
power
- Power to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserPulse
Description copied from interface:MetadataStore
Set the Pulse property of Laser.- Parameters:
pulse
- Pulse to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserPump
public void setLaserPump(java.lang.String pump, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Pump property of Laser.- Parameters:
pump
- Pump to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserRepetitionRate
public void setLaserRepetitionRate(Frequency repetitionRate, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the RepetitionRate property of Laser.- Parameters:
repetitionRate
- RepetitionRate to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserSerialNumber
public void setLaserSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Laser.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserTuneable
public void setLaserTuneable(java.lang.Boolean tuneable, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Tuneable property of Laser.- Parameters:
tuneable
- Tuneable to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserType
Description copied from interface:MetadataStore
Set the Type property of Laser.- Parameters:
type
- Type to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLaserWavelength
Description copied from interface:MetadataStore
Set the Wavelength property of Laser.- Parameters:
wavelength
- Wavelength to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightEmittingDiodeAnnotationRef
public void setLightEmittingDiodeAnnotationRef(java.lang.String annotation, int instrumentIndex, int lightSourceIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of LightEmittingDiode.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.annotationRefIndex
- AnnotationRef index (unused).
-
setLightEmittingDiodeID
public void setLightEmittingDiodeID(java.lang.String id, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the ID property of LightEmittingDiode.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightEmittingDiodeLotNumber
public void setLightEmittingDiodeLotNumber(java.lang.String lotNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the LotNumber property of LightEmittingDiode.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightEmittingDiodeManufacturer
public void setLightEmittingDiodeManufacturer(java.lang.String manufacturer, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of LightEmittingDiode.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightEmittingDiodeModel
public void setLightEmittingDiodeModel(java.lang.String model, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the Model property of LightEmittingDiode.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightEmittingDiodePower
Description copied from interface:MetadataStore
Set the Power property of LightEmittingDiode.- Parameters:
power
- Power to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightEmittingDiodeSerialNumber
public void setLightEmittingDiodeSerialNumber(java.lang.String serialNumber, int instrumentIndex, int lightSourceIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of LightEmittingDiode.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.lightSourceIndex
- the LightSource index.
-
setLightPathAnnotationRef
public void setLightPathAnnotationRef(java.lang.String annotation, int imageIndex, int channelIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of LightPath.- Parameters:
annotation
- AnnotationRef to set.imageIndex
- the Image index.channelIndex
- the Channel index.annotationRefIndex
- AnnotationRef index (unused).
-
setLightPathDichroicRef
public void setLightPathDichroicRef(java.lang.String dichroic, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the DichroicRef property of LightPath.- Parameters:
dichroic
- DichroicRef to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setLightPathEmissionFilterRef
public void setLightPathEmissionFilterRef(java.lang.String emissionFilter, int imageIndex, int channelIndex, int emissionFilterRefIndex)Description copied from interface:MetadataStore
Set the EmissionFilterRef property of LightPath.- Parameters:
emissionFilter
- EmissionFilterRef to set.imageIndex
- the Image index.channelIndex
- the Channel index.emissionFilterRefIndex
- EmissionFilterRef index (unused).
-
setLightPathExcitationFilterRef
public void setLightPathExcitationFilterRef(java.lang.String excitationFilter, int imageIndex, int channelIndex, int excitationFilterRefIndex)Description copied from interface:MetadataStore
Set the ExcitationFilterRef property of LightPath.- Parameters:
excitationFilter
- ExcitationFilterRef to set.imageIndex
- the Image index.channelIndex
- the Channel index.excitationFilterRefIndex
- ExcitationFilterRef index (unused).
-
setChannelLightSourceSettingsAttenuation
public void setChannelLightSourceSettingsAttenuation(PercentFraction attenuation, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Attenuation property of LightSourceSettings.- Parameters:
attenuation
- Attenuation to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setMicrobeamManipulationLightSourceSettingsAttenuation
public void setMicrobeamManipulationLightSourceSettingsAttenuation(PercentFraction attenuation, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)Description copied from interface:MetadataStore
Set the Attenuation property of LightSourceSettings.- Parameters:
attenuation
- Attenuation to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.lightSourceSettingsIndex
- the LightSourceSettings index.
-
setChannelLightSourceSettingsID
public void setChannelLightSourceSettingsID(java.lang.String id, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the ID property of LightSourceSettings.- Parameters:
id
- ID to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setMicrobeamManipulationLightSourceSettingsID
public void setMicrobeamManipulationLightSourceSettingsID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)Description copied from interface:MetadataStore
Set the ID property of LightSourceSettings.- Parameters:
id
- ID to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.lightSourceSettingsIndex
- the LightSourceSettings index.
-
setChannelLightSourceSettingsWavelength
public void setChannelLightSourceSettingsWavelength(Length wavelength, int imageIndex, int channelIndex)Description copied from interface:MetadataStore
Set the Wavelength property of LightSourceSettings.- Parameters:
wavelength
- Wavelength to set.imageIndex
- the Image index.channelIndex
- the Channel index.
-
setMicrobeamManipulationLightSourceSettingsWavelength
public void setMicrobeamManipulationLightSourceSettingsWavelength(Length wavelength, int experimentIndex, int microbeamManipulationIndex, int lightSourceSettingsIndex)Description copied from interface:MetadataStore
Set the Wavelength property of LightSourceSettings.- Parameters:
wavelength
- Wavelength to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.lightSourceSettingsIndex
- the LightSourceSettings index.
-
setLineAnnotationRef
public void setLineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Line.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setLineFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Line.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Line.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Line.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Line.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Line.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineID
public void setLineID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Line.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineLocked
public void setLineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Line.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineMarkerEnd
Description copied from interface:MetadataStore
Set the MarkerEnd property of Line.- Parameters:
markerEnd
- MarkerEnd to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineMarkerStart
Description copied from interface:MetadataStore
Set the MarkerStart property of Line.- Parameters:
markerStart
- MarkerStart to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Line.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineStrokeDashArray
public void setLineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Line.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Line.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineText
public void setLineText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Line.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineTheC
Description copied from interface:MetadataStore
Set the TheC property of Line.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineTheT
Description copied from interface:MetadataStore
Set the TheT property of Line.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Line.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineTransform
Description copied from interface:MetadataStore
Set the Transform property of Line.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineX1
public void setLineX1(java.lang.Double x1, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X1 property of Line.- Parameters:
x1
- X1 to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineX2
public void setLineX2(java.lang.Double x2, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X2 property of Line.- Parameters:
x2
- X2 to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineY1
public void setLineY1(java.lang.Double y1, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y1 property of Line.- Parameters:
y1
- Y1 to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setLineY2
public void setLineY2(java.lang.Double y2, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y2 property of Line.- Parameters:
y2
- Y2 to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setListAnnotationAnnotationRef
public void setListAnnotationAnnotationRef(java.lang.String annotation, int listAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of ListAnnotation.- Parameters:
annotation
- AnnotationRef to set.listAnnotationIndex
- the ListAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setListAnnotationAnnotator
public void setListAnnotationAnnotator(java.lang.String annotator, int listAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of ListAnnotation.- Parameters:
annotator
- Annotator to set.listAnnotationIndex
- the ListAnnotation index.
-
setListAnnotationDescription
public void setListAnnotationDescription(java.lang.String description, int listAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of ListAnnotation.- Parameters:
description
- Description to set.listAnnotationIndex
- the ListAnnotation index.
-
setListAnnotationID
public void setListAnnotationID(java.lang.String id, int listAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of ListAnnotation.- Parameters:
id
- ID to set.listAnnotationIndex
- the ListAnnotation index.
-
setListAnnotationNamespace
public void setListAnnotationNamespace(java.lang.String namespace, int listAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of ListAnnotation.- Parameters:
namespace
- Namespace to set.listAnnotationIndex
- the ListAnnotation index.
-
setLongAnnotationAnnotationRef
public void setLongAnnotationAnnotationRef(java.lang.String annotation, int longAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of LongAnnotation.- Parameters:
annotation
- AnnotationRef to set.longAnnotationIndex
- the LongAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setLongAnnotationAnnotator
public void setLongAnnotationAnnotator(java.lang.String annotator, int longAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of LongAnnotation.- Parameters:
annotator
- Annotator to set.longAnnotationIndex
- the LongAnnotation index.
-
setLongAnnotationDescription
public void setLongAnnotationDescription(java.lang.String description, int longAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of LongAnnotation.- Parameters:
description
- Description to set.longAnnotationIndex
- the LongAnnotation index.
-
setLongAnnotationID
public void setLongAnnotationID(java.lang.String id, int longAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of LongAnnotation.- Parameters:
id
- ID to set.longAnnotationIndex
- the LongAnnotation index.
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setLongAnnotationNamespace
public void setLongAnnotationNamespace(java.lang.String namespace, int longAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of LongAnnotation.- Parameters:
namespace
- Namespace to set.longAnnotationIndex
- the LongAnnotation index.
-
setLongAnnotationValue
public void setLongAnnotationValue(java.lang.Long value, int longAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of LongAnnotation.- Parameters:
value
- Value to set.longAnnotationIndex
- the LongAnnotation index.
-
setMapAnnotationAnnotationRef
public void setMapAnnotationAnnotationRef(java.lang.String annotation, int mapAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of MapAnnotation.- Parameters:
annotation
- AnnotationRef to set.mapAnnotationIndex
- the MapAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setMapAnnotationAnnotator
public void setMapAnnotationAnnotator(java.lang.String annotator, int mapAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of MapAnnotation.- Parameters:
annotator
- Annotator to set.mapAnnotationIndex
- the MapAnnotation index.
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setMapAnnotationDescription
public void setMapAnnotationDescription(java.lang.String description, int mapAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of MapAnnotation.- Parameters:
description
- Description to set.mapAnnotationIndex
- the MapAnnotation index.
-
setMapAnnotationID
public void setMapAnnotationID(java.lang.String id, int mapAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of MapAnnotation.- Parameters:
id
- ID to set.mapAnnotationIndex
- the MapAnnotation index.
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setMapAnnotationNamespace
public void setMapAnnotationNamespace(java.lang.String namespace, int mapAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of MapAnnotation.- Parameters:
namespace
- Namespace to set.mapAnnotationIndex
- the MapAnnotation index.
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setMaskAnnotationRef
public void setMaskAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Mask.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setMaskFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Mask.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Mask.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Mask.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Mask.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setMaskFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Mask.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskHeight
public void setMaskHeight(java.lang.Double height, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Height property of Mask.- Parameters:
height
- Height to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskID
public void setMaskID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Mask.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskLocked
public void setMaskLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Mask.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Mask.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskStrokeDashArray
public void setMaskStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Mask.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Mask.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setMaskText
public void setMaskText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Mask.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskTheC
Description copied from interface:MetadataStore
Set the TheC property of Mask.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskTheT
Description copied from interface:MetadataStore
Set the TheT property of Mask.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Mask.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskTransform
Description copied from interface:MetadataStore
Set the Transform property of Mask.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
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setMaskWidth
public void setMaskWidth(java.lang.Double width, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Width property of Mask.- Parameters:
width
- Width to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskX
public void setMaskX(java.lang.Double x, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X property of Mask.- Parameters:
x
- X to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMaskY
public void setMaskY(java.lang.Double y, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y property of Mask.- Parameters:
y
- Y to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setMicrobeamManipulationDescription
public void setMicrobeamManipulationDescription(java.lang.String description, int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataStore
Set the Description property of MicrobeamManipulation.- Parameters:
description
- Description to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.
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setMicrobeamManipulationExperimenterRef
public void setMicrobeamManipulationExperimenterRef(java.lang.String experimenter, int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataStore
Set the ExperimenterRef property of MicrobeamManipulation.- Parameters:
experimenter
- ExperimenterRef to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.
-
setMicrobeamManipulationID
public void setMicrobeamManipulationID(java.lang.String id, int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataStore
Set the ID property of MicrobeamManipulation.- Parameters:
id
- ID to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.
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setMicrobeamManipulationROIRef
public void setMicrobeamManipulationROIRef(java.lang.String roi, int experimentIndex, int microbeamManipulationIndex, int ROIRefIndex)Description copied from interface:MetadataStore
Set the ROIRef property of MicrobeamManipulation.- Parameters:
roi
- ROIRef to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.ROIRefIndex
- ROIRef index (unused).
-
setMicrobeamManipulationType
public void setMicrobeamManipulationType(MicrobeamManipulationType type, int experimentIndex, int microbeamManipulationIndex)Description copied from interface:MetadataStore
Set the Type property of MicrobeamManipulation.- Parameters:
type
- Type to set.experimentIndex
- the Experiment index.microbeamManipulationIndex
- the MicrobeamManipulation index.
-
setMicroscopeLotNumber
public void setMicroscopeLotNumber(java.lang.String lotNumber, int instrumentIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Microscope.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.
-
setMicroscopeManufacturer
public void setMicroscopeManufacturer(java.lang.String manufacturer, int instrumentIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Microscope.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.
-
setMicroscopeModel
public void setMicroscopeModel(java.lang.String model, int instrumentIndex)Description copied from interface:MetadataStore
Set the Model property of Microscope.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.
-
setMicroscopeSerialNumber
public void setMicroscopeSerialNumber(java.lang.String serialNumber, int instrumentIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Microscope.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.
-
setMicroscopeType
Description copied from interface:MetadataStore
Set the Type property of Microscope.- Parameters:
type
- Type to set.instrumentIndex
- the Instrument index.
-
setObjectiveAnnotationRef
public void setObjectiveAnnotationRef(java.lang.String annotation, int instrumentIndex, int objectiveIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Objective.- Parameters:
annotation
- AnnotationRef to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.annotationRefIndex
- AnnotationRef index (unused).
-
setObjectiveCalibratedMagnification
public void setObjectiveCalibratedMagnification(java.lang.Double calibratedMagnification, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the CalibratedMagnification property of Objective.- Parameters:
calibratedMagnification
- CalibratedMagnification to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveCorrection
Description copied from interface:MetadataStore
Set the Correction property of Objective.- Parameters:
correction
- Correction to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveID
public void setObjectiveID(java.lang.String id, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the ID property of Objective.- Parameters:
id
- ID to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveImmersion
Description copied from interface:MetadataStore
Set the Immersion property of Objective.- Parameters:
immersion
- Immersion to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveIris
public void setObjectiveIris(java.lang.Boolean iris, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the Iris property of Objective.- Parameters:
iris
- Iris to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveLensNA
public void setObjectiveLensNA(java.lang.Double lensNA, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the LensNA property of Objective.- Parameters:
lensNA
- LensNA to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveLotNumber
public void setObjectiveLotNumber(java.lang.String lotNumber, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the LotNumber property of Objective.- Parameters:
lotNumber
- LotNumber to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveManufacturer
public void setObjectiveManufacturer(java.lang.String manufacturer, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the Manufacturer property of Objective.- Parameters:
manufacturer
- Manufacturer to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveModel
public void setObjectiveModel(java.lang.String model, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the Model property of Objective.- Parameters:
model
- Model to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveNominalMagnification
public void setObjectiveNominalMagnification(java.lang.Double nominalMagnification, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the NominalMagnification property of Objective.- Parameters:
nominalMagnification
- NominalMagnification to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveSerialNumber
public void setObjectiveSerialNumber(java.lang.String serialNumber, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the SerialNumber property of Objective.- Parameters:
serialNumber
- SerialNumber to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveWorkingDistance
public void setObjectiveWorkingDistance(Length workingDistance, int instrumentIndex, int objectiveIndex)Description copied from interface:MetadataStore
Set the WorkingDistance property of Objective.- Parameters:
workingDistance
- WorkingDistance to set.instrumentIndex
- the Instrument index.objectiveIndex
- the Objective index.
-
setObjectiveSettingsCorrectionCollar
public void setObjectiveSettingsCorrectionCollar(java.lang.Double correctionCollar, int imageIndex)Description copied from interface:MetadataStore
Set the CorrectionCollar property of ObjectiveSettings.- Parameters:
correctionCollar
- CorrectionCollar to set.imageIndex
- the Image index.
-
setObjectiveSettingsID
public void setObjectiveSettingsID(java.lang.String id, int imageIndex)Description copied from interface:MetadataStore
Set the ID property of ObjectiveSettings.- Parameters:
id
- ID to set.imageIndex
- the Image index.
-
setObjectiveSettingsMedium
Description copied from interface:MetadataStore
Set the Medium property of ObjectiveSettings.- Parameters:
medium
- Medium to set.imageIndex
- the Image index.
-
setObjectiveSettingsRefractiveIndex
public void setObjectiveSettingsRefractiveIndex(java.lang.Double refractiveIndex, int imageIndex)Description copied from interface:MetadataStore
Set the RefractiveIndex property of ObjectiveSettings.- Parameters:
refractiveIndex
- RefractiveIndex to set.imageIndex
- the Image index.
-
setPixelsBigEndian
public void setPixelsBigEndian(java.lang.Boolean bigEndian, int imageIndex)Description copied from interface:MetadataStore
Set the BigEndian property of Pixels.- Parameters:
bigEndian
- BigEndian to set.imageIndex
- the Image index.
-
setPixelsDimensionOrder
Description copied from interface:MetadataStore
Set the DimensionOrder property of Pixels.- Parameters:
dimensionOrder
- DimensionOrder to set.imageIndex
- the Image index.
-
setPixelsID
public void setPixelsID(java.lang.String id, int imageIndex)Description copied from interface:MetadataStore
Set the ID property of Pixels.- Parameters:
id
- ID to set.imageIndex
- the Image index.
-
setPixelsInterleaved
public void setPixelsInterleaved(java.lang.Boolean interleaved, int imageIndex)Description copied from interface:MetadataStore
Set the Interleaved property of Pixels.- Parameters:
interleaved
- Interleaved to set.imageIndex
- the Image index.
-
setPixelsPhysicalSizeX
Description copied from interface:MetadataStore
Set the PhysicalSizeX property of Pixels.- Parameters:
physicalSizeX
- PhysicalSizeX to set.imageIndex
- the Image index.
-
setPixelsPhysicalSizeY
Description copied from interface:MetadataStore
Set the PhysicalSizeY property of Pixels.- Parameters:
physicalSizeY
- PhysicalSizeY to set.imageIndex
- the Image index.
-
setPixelsPhysicalSizeZ
Description copied from interface:MetadataStore
Set the PhysicalSizeZ property of Pixels.- Parameters:
physicalSizeZ
- PhysicalSizeZ to set.imageIndex
- the Image index.
-
setPixelsSignificantBits
Description copied from interface:MetadataStore
Set the SignificantBits property of Pixels.- Parameters:
significantBits
- SignificantBits to set.imageIndex
- the Image index.
-
setPixelsSizeC
Description copied from interface:MetadataStore
Set the SizeC property of Pixels.- Parameters:
sizeC
- SizeC to set.imageIndex
- the Image index.
-
setPixelsSizeT
Description copied from interface:MetadataStore
Set the SizeT property of Pixels.- Parameters:
sizeT
- SizeT to set.imageIndex
- the Image index.
-
setPixelsSizeX
Description copied from interface:MetadataStore
Set the SizeX property of Pixels.- Parameters:
sizeX
- SizeX to set.imageIndex
- the Image index.
-
setPixelsSizeY
Description copied from interface:MetadataStore
Set the SizeY property of Pixels.- Parameters:
sizeY
- SizeY to set.imageIndex
- the Image index.
-
setPixelsSizeZ
Description copied from interface:MetadataStore
Set the SizeZ property of Pixels.- Parameters:
sizeZ
- SizeZ to set.imageIndex
- the Image index.
-
setPixelsTimeIncrement
Description copied from interface:MetadataStore
Set the TimeIncrement property of Pixels.- Parameters:
timeIncrement
- TimeIncrement to set.imageIndex
- the Image index.
-
setPixelsType
Description copied from interface:MetadataStore
Set the Type property of Pixels.- Parameters:
type
- Type to set.imageIndex
- the Image index.
-
setPlaneAnnotationRef
public void setPlaneAnnotationRef(java.lang.String annotation, int imageIndex, int planeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Plane.- Parameters:
annotation
- AnnotationRef to set.imageIndex
- the Image index.planeIndex
- the Plane index.annotationRefIndex
- AnnotationRef index (unused).
-
setPlaneDeltaT
Description copied from interface:MetadataStore
Set the DeltaT property of Plane.- Parameters:
deltaT
- DeltaT to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlaneExposureTime
Description copied from interface:MetadataStore
Set the ExposureTime property of Plane.- Parameters:
exposureTime
- ExposureTime to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlaneHashSHA1
public void setPlaneHashSHA1(java.lang.String hashSHA1, int imageIndex, int planeIndex)Description copied from interface:MetadataStore
Set the HashSHA1 property of Plane.- Parameters:
hashSHA1
- HashSHA1 to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlanePositionX
Description copied from interface:MetadataStore
Set the PositionX property of Plane.- Parameters:
positionX
- PositionX to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlanePositionY
Description copied from interface:MetadataStore
Set the PositionY property of Plane.- Parameters:
positionY
- PositionY to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlanePositionZ
Description copied from interface:MetadataStore
Set the PositionZ property of Plane.- Parameters:
positionZ
- PositionZ to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlaneTheC
Description copied from interface:MetadataStore
Set the TheC property of Plane.- Parameters:
theC
- TheC to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlaneTheT
Description copied from interface:MetadataStore
Set the TheT property of Plane.- Parameters:
theT
- TheT to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlaneTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Plane.- Parameters:
theZ
- TheZ to set.imageIndex
- the Image index.planeIndex
- the Plane index.
-
setPlateAnnotationRef
public void setPlateAnnotationRef(java.lang.String annotation, int plateIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Plate.- Parameters:
annotation
- AnnotationRef to set.plateIndex
- the Plate index.annotationRefIndex
- AnnotationRef index (unused).
-
setPlateColumnNamingConvention
public void setPlateColumnNamingConvention(NamingConvention columnNamingConvention, int plateIndex)Description copied from interface:MetadataStore
Set the ColumnNamingConvention property of Plate.- Parameters:
columnNamingConvention
- ColumnNamingConvention to set.plateIndex
- the Plate index.
-
setPlateColumns
Description copied from interface:MetadataStore
Set the Columns property of Plate.- Parameters:
columns
- Columns to set.plateIndex
- the Plate index.
-
setPlateDescription
public void setPlateDescription(java.lang.String description, int plateIndex)Description copied from interface:MetadataStore
Set the Description property of Plate.- Parameters:
description
- Description to set.plateIndex
- the Plate index.
-
setPlateExternalIdentifier
public void setPlateExternalIdentifier(java.lang.String externalIdentifier, int plateIndex)Description copied from interface:MetadataStore
Set the ExternalIdentifier property of Plate.- Parameters:
externalIdentifier
- ExternalIdentifier to set.plateIndex
- the Plate index.
-
setPlateFieldIndex
Description copied from interface:MetadataStore
Set the FieldIndex property of Plate.- Parameters:
fieldIndex
- FieldIndex to set.plateIndex
- the Plate index.
-
setPlateID
public void setPlateID(java.lang.String id, int plateIndex)Description copied from interface:MetadataStore
Set the ID property of Plate.- Parameters:
id
- ID to set.plateIndex
- the Plate index.
-
setPlateName
public void setPlateName(java.lang.String name, int plateIndex)Description copied from interface:MetadataStore
Set the Name property of Plate.- Parameters:
name
- Name to set.plateIndex
- the Plate index.
-
setPlateRowNamingConvention
Description copied from interface:MetadataStore
Set the RowNamingConvention property of Plate.- Parameters:
rowNamingConvention
- RowNamingConvention to set.plateIndex
- the Plate index.
-
setPlateRows
Description copied from interface:MetadataStore
Set the Rows property of Plate.- Parameters:
rows
- Rows to set.plateIndex
- the Plate index.
-
setPlateStatus
public void setPlateStatus(java.lang.String status, int plateIndex)Description copied from interface:MetadataStore
Set the Status property of Plate.- Parameters:
status
- Status to set.plateIndex
- the Plate index.
-
setPlateWellOriginX
Description copied from interface:MetadataStore
Set the WellOriginX property of Plate.- Parameters:
wellOriginX
- WellOriginX to set.plateIndex
- the Plate index.
-
setPlateWellOriginY
Description copied from interface:MetadataStore
Set the WellOriginY property of Plate.- Parameters:
wellOriginY
- WellOriginY to set.plateIndex
- the Plate index.
-
setPlateAcquisitionAnnotationRef
public void setPlateAcquisitionAnnotationRef(java.lang.String annotation, int plateIndex, int plateAcquisitionIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of PlateAcquisition.- Parameters:
annotation
- AnnotationRef to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.annotationRefIndex
- AnnotationRef index (unused).
-
setPlateAcquisitionDescription
public void setPlateAcquisitionDescription(java.lang.String description, int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataStore
Set the Description property of PlateAcquisition.- Parameters:
description
- Description to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.
-
setPlateAcquisitionEndTime
public void setPlateAcquisitionEndTime(Timestamp endTime, int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataStore
Set the EndTime property of PlateAcquisition.- Parameters:
endTime
- EndTime to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.
-
setPlateAcquisitionID
public void setPlateAcquisitionID(java.lang.String id, int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataStore
Set the ID property of PlateAcquisition.- Parameters:
id
- ID to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.
-
setPlateAcquisitionMaximumFieldCount
public void setPlateAcquisitionMaximumFieldCount(PositiveInteger maximumFieldCount, int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataStore
Set the MaximumFieldCount property of PlateAcquisition.- Parameters:
maximumFieldCount
- MaximumFieldCount to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.
-
setPlateAcquisitionName
public void setPlateAcquisitionName(java.lang.String name, int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataStore
Set the Name property of PlateAcquisition.- Parameters:
name
- Name to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.
-
setPlateAcquisitionStartTime
public void setPlateAcquisitionStartTime(Timestamp startTime, int plateIndex, int plateAcquisitionIndex)Description copied from interface:MetadataStore
Set the StartTime property of PlateAcquisition.- Parameters:
startTime
- StartTime to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.
-
setPlateAcquisitionWellSampleRef
public void setPlateAcquisitionWellSampleRef(java.lang.String wellSample, int plateIndex, int plateAcquisitionIndex, int wellSampleRefIndex)Description copied from interface:MetadataStore
Set the WellSampleRef property of PlateAcquisition.- Parameters:
wellSample
- WellSampleRef to set.plateIndex
- the Plate index.plateAcquisitionIndex
- the PlateAcquisition index.wellSampleRefIndex
- WellSampleRef index (unused).
-
setPointAnnotationRef
public void setPointAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Point.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setPointFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Point.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Point.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Point.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Point.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Point.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointID
public void setPointID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Point.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointLocked
public void setPointLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Point.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Point.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointStrokeDashArray
public void setPointStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Point.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Point.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointText
public void setPointText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Point.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointTheC
Description copied from interface:MetadataStore
Set the TheC property of Point.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointTheT
Description copied from interface:MetadataStore
Set the TheT property of Point.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Point.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointTransform
Description copied from interface:MetadataStore
Set the Transform property of Point.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointX
public void setPointX(java.lang.Double x, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X property of Point.- Parameters:
x
- X to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPointY
public void setPointY(java.lang.Double y, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y property of Point.- Parameters:
y
- Y to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonAnnotationRef
public void setPolygonAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Polygon.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setPolygonFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Polygon.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Polygon.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Polygon.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Polygon.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Polygon.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonID
public void setPolygonID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Polygon.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonLocked
public void setPolygonLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Polygon.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonPoints
public void setPolygonPoints(java.lang.String points, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Points property of Polygon.- Parameters:
points
- Points to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Polygon.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonStrokeDashArray
public void setPolygonStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Polygon.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Polygon.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonText
public void setPolygonText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Polygon.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonTheC
Description copied from interface:MetadataStore
Set the TheC property of Polygon.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonTheT
Description copied from interface:MetadataStore
Set the TheT property of Polygon.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Polygon.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolygonTransform
Description copied from interface:MetadataStore
Set the Transform property of Polygon.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineAnnotationRef
public void setPolylineAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Polyline.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setPolylineFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Polyline.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Polyline.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Polyline.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Polyline.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Polyline.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineID
public void setPolylineID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Polyline.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineLocked
public void setPolylineLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Polyline.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineMarkerEnd
Description copied from interface:MetadataStore
Set the MarkerEnd property of Polyline.- Parameters:
markerEnd
- MarkerEnd to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineMarkerStart
Description copied from interface:MetadataStore
Set the MarkerStart property of Polyline.- Parameters:
markerStart
- MarkerStart to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylinePoints
public void setPolylinePoints(java.lang.String points, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Points property of Polyline.- Parameters:
points
- Points to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Polyline.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineStrokeDashArray
public void setPolylineStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Polyline.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Polyline.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineText
public void setPolylineText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Polyline.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineTheC
Description copied from interface:MetadataStore
Set the TheC property of Polyline.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineTheT
Description copied from interface:MetadataStore
Set the TheT property of Polyline.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Polyline.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setPolylineTransform
Description copied from interface:MetadataStore
Set the Transform property of Polyline.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setProjectAnnotationRef
public void setProjectAnnotationRef(java.lang.String annotation, int projectIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Project.- Parameters:
annotation
- AnnotationRef to set.projectIndex
- the Project index.annotationRefIndex
- AnnotationRef index (unused).
-
setProjectDatasetRef
public void setProjectDatasetRef(java.lang.String dataset, int projectIndex, int datasetRefIndex)Description copied from interface:MetadataStore
Set the DatasetRef property of Project.- Parameters:
dataset
- DatasetRef to set.projectIndex
- the Project index.datasetRefIndex
- DatasetRef index (unused).
-
setProjectDescription
public void setProjectDescription(java.lang.String description, int projectIndex)Description copied from interface:MetadataStore
Set the Description property of Project.- Parameters:
description
- Description to set.projectIndex
- the Project index.
-
setProjectExperimenterGroupRef
public void setProjectExperimenterGroupRef(java.lang.String experimenterGroup, int projectIndex)Description copied from interface:MetadataStore
Set the ExperimenterGroupRef property of Project.- Parameters:
experimenterGroup
- ExperimenterGroupRef to set.projectIndex
- the Project index.
-
setProjectExperimenterRef
public void setProjectExperimenterRef(java.lang.String experimenter, int projectIndex)Description copied from interface:MetadataStore
Set the ExperimenterRef property of Project.- Parameters:
experimenter
- ExperimenterRef to set.projectIndex
- the Project index.
-
setProjectID
public void setProjectID(java.lang.String id, int projectIndex)Description copied from interface:MetadataStore
Set the ID property of Project.- Parameters:
id
- ID to set.projectIndex
- the Project index.
-
setProjectName
public void setProjectName(java.lang.String name, int projectIndex)Description copied from interface:MetadataStore
Set the Name property of Project.- Parameters:
name
- Name to set.projectIndex
- the Project index.
-
setROIAnnotationRef
public void setROIAnnotationRef(java.lang.String annotation, int ROIIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of ROI.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.annotationRefIndex
- AnnotationRef index (unused).
-
setROIDescription
public void setROIDescription(java.lang.String description, int ROIIndex)Description copied from interface:MetadataStore
Set the Description property of ROI.- Parameters:
description
- Description to set.ROIIndex
- the ROI index.
-
setROIID
public void setROIID(java.lang.String id, int ROIIndex)Description copied from interface:MetadataStore
Set the ID property of ROI.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.
-
setROIName
public void setROIName(java.lang.String name, int ROIIndex)Description copied from interface:MetadataStore
Set the Name property of ROI.- Parameters:
name
- Name to set.ROIIndex
- the ROI index.
-
setReagentAnnotationRef
public void setReagentAnnotationRef(java.lang.String annotation, int screenIndex, int reagentIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Reagent.- Parameters:
annotation
- AnnotationRef to set.screenIndex
- the Screen index.reagentIndex
- the Reagent index.annotationRefIndex
- AnnotationRef index (unused).
-
setReagentDescription
public void setReagentDescription(java.lang.String description, int screenIndex, int reagentIndex)Description copied from interface:MetadataStore
Set the Description property of Reagent.- Parameters:
description
- Description to set.screenIndex
- the Screen index.reagentIndex
- the Reagent index.
-
setReagentID
public void setReagentID(java.lang.String id, int screenIndex, int reagentIndex)Description copied from interface:MetadataStore
Set the ID property of Reagent.- Parameters:
id
- ID to set.screenIndex
- the Screen index.reagentIndex
- the Reagent index.
-
setReagentName
public void setReagentName(java.lang.String name, int screenIndex, int reagentIndex)Description copied from interface:MetadataStore
Set the Name property of Reagent.- Parameters:
name
- Name to set.screenIndex
- the Screen index.reagentIndex
- the Reagent index.
-
setReagentReagentIdentifier
public void setReagentReagentIdentifier(java.lang.String reagentIdentifier, int screenIndex, int reagentIndex)Description copied from interface:MetadataStore
Set the ReagentIdentifier property of Reagent.- Parameters:
reagentIdentifier
- ReagentIdentifier to set.screenIndex
- the Screen index.reagentIndex
- the Reagent index.
-
setRectangleAnnotationRef
public void setRectangleAnnotationRef(java.lang.String annotation, int ROIIndex, int shapeIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Rectangle.- Parameters:
annotation
- AnnotationRef to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.annotationRefIndex
- AnnotationRef index (unused).
-
setRectangleFillColor
Description copied from interface:MetadataStore
Set the FillColor property of Rectangle.- Parameters:
fillColor
- FillColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleFillRule
Description copied from interface:MetadataStore
Set the FillRule property of Rectangle.- Parameters:
fillRule
- FillRule to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleFontFamily
Description copied from interface:MetadataStore
Set the FontFamily property of Rectangle.- Parameters:
fontFamily
- FontFamily to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleFontSize
Description copied from interface:MetadataStore
Set the FontSize property of Rectangle.- Parameters:
fontSize
- FontSize to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleFontStyle
Description copied from interface:MetadataStore
Set the FontStyle property of Rectangle.- Parameters:
fontStyle
- FontStyle to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleHeight
public void setRectangleHeight(java.lang.Double height, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Height property of Rectangle.- Parameters:
height
- Height to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleID
public void setRectangleID(java.lang.String id, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the ID property of Rectangle.- Parameters:
id
- ID to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleLocked
public void setRectangleLocked(java.lang.Boolean locked, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Locked property of Rectangle.- Parameters:
locked
- Locked to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleStrokeColor
Description copied from interface:MetadataStore
Set the StrokeColor property of Rectangle.- Parameters:
strokeColor
- StrokeColor to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleStrokeDashArray
public void setRectangleStrokeDashArray(java.lang.String strokeDashArray, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the StrokeDashArray property of Rectangle.- Parameters:
strokeDashArray
- StrokeDashArray to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleStrokeWidth
Description copied from interface:MetadataStore
Set the StrokeWidth property of Rectangle.- Parameters:
strokeWidth
- StrokeWidth to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleText
public void setRectangleText(java.lang.String text, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Text property of Rectangle.- Parameters:
text
- Text to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleTheC
Description copied from interface:MetadataStore
Set the TheC property of Rectangle.- Parameters:
theC
- TheC to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleTheT
Description copied from interface:MetadataStore
Set the TheT property of Rectangle.- Parameters:
theT
- TheT to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleTheZ
Description copied from interface:MetadataStore
Set the TheZ property of Rectangle.- Parameters:
theZ
- TheZ to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleTransform
Description copied from interface:MetadataStore
Set the Transform property of Rectangle.- Parameters:
transform
- Transform to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleWidth
public void setRectangleWidth(java.lang.Double width, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Width property of Rectangle.- Parameters:
width
- Width to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleX
public void setRectangleX(java.lang.Double x, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the X property of Rectangle.- Parameters:
x
- X to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRectangleY
public void setRectangleY(java.lang.Double y, int ROIIndex, int shapeIndex)Description copied from interface:MetadataStore
Set the Y property of Rectangle.- Parameters:
y
- Y to set.ROIIndex
- the ROI index.shapeIndex
- the Shape index.
-
setRightsRightsHeld
public void setRightsRightsHeld(java.lang.String rightsHeld)Description copied from interface:MetadataStore
Set the RightsHeld property of Rights.- Parameters:
rightsHeld
- RightsHeld to set.
-
setRightsRightsHolder
public void setRightsRightsHolder(java.lang.String rightsHolder)Description copied from interface:MetadataStore
Set the RightsHolder property of Rights.- Parameters:
rightsHolder
- RightsHolder to set.
-
setScreenAnnotationRef
public void setScreenAnnotationRef(java.lang.String annotation, int screenIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Screen.- Parameters:
annotation
- AnnotationRef to set.screenIndex
- the Screen index.annotationRefIndex
- AnnotationRef index (unused).
-
setScreenDescription
public void setScreenDescription(java.lang.String description, int screenIndex)Description copied from interface:MetadataStore
Set the Description property of Screen.- Parameters:
description
- Description to set.screenIndex
- the Screen index.
-
setScreenID
public void setScreenID(java.lang.String id, int screenIndex)Description copied from interface:MetadataStore
Set the ID property of Screen.- Parameters:
id
- ID to set.screenIndex
- the Screen index.
-
setScreenName
public void setScreenName(java.lang.String name, int screenIndex)Description copied from interface:MetadataStore
Set the Name property of Screen.- Parameters:
name
- Name to set.screenIndex
- the Screen index.
-
setScreenPlateRef
public void setScreenPlateRef(java.lang.String plate, int screenIndex, int plateRefIndex)Description copied from interface:MetadataStore
Set the PlateRef property of Screen.- Parameters:
plate
- PlateRef to set.screenIndex
- the Screen index.plateRefIndex
- PlateRef index (unused).
-
setScreenProtocolDescription
public void setScreenProtocolDescription(java.lang.String protocolDescription, int screenIndex)Description copied from interface:MetadataStore
Set the ProtocolDescription property of Screen.- Parameters:
protocolDescription
- ProtocolDescription to set.screenIndex
- the Screen index.
-
setScreenProtocolIdentifier
public void setScreenProtocolIdentifier(java.lang.String protocolIdentifier, int screenIndex)Description copied from interface:MetadataStore
Set the ProtocolIdentifier property of Screen.- Parameters:
protocolIdentifier
- ProtocolIdentifier to set.screenIndex
- the Screen index.
-
setScreenReagentSetDescription
public void setScreenReagentSetDescription(java.lang.String reagentSetDescription, int screenIndex)Description copied from interface:MetadataStore
Set the ReagentSetDescription property of Screen.- Parameters:
reagentSetDescription
- ReagentSetDescription to set.screenIndex
- the Screen index.
-
setScreenReagentSetIdentifier
public void setScreenReagentSetIdentifier(java.lang.String reagentSetIdentifier, int screenIndex)Description copied from interface:MetadataStore
Set the ReagentSetIdentifier property of Screen.- Parameters:
reagentSetIdentifier
- ReagentSetIdentifier to set.screenIndex
- the Screen index.
-
setScreenType
public void setScreenType(java.lang.String type, int screenIndex)Description copied from interface:MetadataStore
Set the Type property of Screen.- Parameters:
type
- Type to set.screenIndex
- the Screen index.
-
setStageLabelName
public void setStageLabelName(java.lang.String name, int imageIndex)Description copied from interface:MetadataStore
Set the Name property of StageLabel.- Parameters:
name
- Name to set.imageIndex
- the Image index.
-
setStageLabelX
Description copied from interface:MetadataStore
Set the X property of StageLabel.- Parameters:
x
- X to set.imageIndex
- the Image index.
-
setStageLabelY
Description copied from interface:MetadataStore
Set the Y property of StageLabel.- Parameters:
y
- Y to set.imageIndex
- the Image index.
-
setStageLabelZ
Description copied from interface:MetadataStore
Set the Z property of StageLabel.- Parameters:
z
- Z to set.imageIndex
- the Image index.
-
setTagAnnotationAnnotationRef
public void setTagAnnotationAnnotationRef(java.lang.String annotation, int tagAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of TagAnnotation.- Parameters:
annotation
- AnnotationRef to set.tagAnnotationIndex
- the TagAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setTagAnnotationAnnotator
public void setTagAnnotationAnnotator(java.lang.String annotator, int tagAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of TagAnnotation.- Parameters:
annotator
- Annotator to set.tagAnnotationIndex
- the TagAnnotation index.
-
setTagAnnotationDescription
public void setTagAnnotationDescription(java.lang.String description, int tagAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of TagAnnotation.- Parameters:
description
- Description to set.tagAnnotationIndex
- the TagAnnotation index.
-
setTagAnnotationID
public void setTagAnnotationID(java.lang.String id, int tagAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of TagAnnotation.- Parameters:
id
- ID to set.tagAnnotationIndex
- the TagAnnotation index.
-
setTagAnnotationNamespace
public void setTagAnnotationNamespace(java.lang.String namespace, int tagAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of TagAnnotation.- Parameters:
namespace
- Namespace to set.tagAnnotationIndex
- the TagAnnotation index.
-
setTagAnnotationValue
public void setTagAnnotationValue(java.lang.String value, int tagAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of TagAnnotation.- Parameters:
value
- Value to set.tagAnnotationIndex
- the TagAnnotation index.
-
setTermAnnotationAnnotationRef
public void setTermAnnotationAnnotationRef(java.lang.String annotation, int termAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of TermAnnotation.- Parameters:
annotation
- AnnotationRef to set.termAnnotationIndex
- the TermAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
-
setTermAnnotationAnnotator
public void setTermAnnotationAnnotator(java.lang.String annotator, int termAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of TermAnnotation.- Parameters:
annotator
- Annotator to set.termAnnotationIndex
- the TermAnnotation index.
-
setTermAnnotationDescription
public void setTermAnnotationDescription(java.lang.String description, int termAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of TermAnnotation.- Parameters:
description
- Description to set.termAnnotationIndex
- the TermAnnotation index.
-
setTermAnnotationID
public void setTermAnnotationID(java.lang.String id, int termAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of TermAnnotation.- Parameters:
id
- ID to set.termAnnotationIndex
- the TermAnnotation index.
-
setTermAnnotationNamespace
public void setTermAnnotationNamespace(java.lang.String namespace, int termAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of TermAnnotation.- Parameters:
namespace
- Namespace to set.termAnnotationIndex
- the TermAnnotation index.
-
setTermAnnotationValue
public void setTermAnnotationValue(java.lang.String value, int termAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of TermAnnotation.- Parameters:
value
- Value to set.termAnnotationIndex
- the TermAnnotation index.
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setTiffDataFirstC
Description copied from interface:MetadataStore
Set the FirstC property of TiffData.- Parameters:
firstC
- FirstC to set.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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setTiffDataFirstT
Description copied from interface:MetadataStore
Set the FirstT property of TiffData.- Parameters:
firstT
- FirstT to set.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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setTiffDataFirstZ
Description copied from interface:MetadataStore
Set the FirstZ property of TiffData.- Parameters:
firstZ
- FirstZ to set.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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setTiffDataIFD
Description copied from interface:MetadataStore
Set the IFD property of TiffData.- Parameters:
ifd
- IFD to set.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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setTiffDataPlaneCount
public void setTiffDataPlaneCount(NonNegativeInteger planeCount, int imageIndex, int tiffDataIndex)Description copied from interface:MetadataStore
Set the PlaneCount property of TiffData.- Parameters:
planeCount
- PlaneCount to set.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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setTimestampAnnotationAnnotationRef
public void setTimestampAnnotationAnnotationRef(java.lang.String annotation, int timestampAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of TimestampAnnotation.- Parameters:
annotation
- AnnotationRef to set.timestampAnnotationIndex
- the TimestampAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
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setTimestampAnnotationAnnotator
public void setTimestampAnnotationAnnotator(java.lang.String annotator, int timestampAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of TimestampAnnotation.- Parameters:
annotator
- Annotator to set.timestampAnnotationIndex
- the TimestampAnnotation index.
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setTimestampAnnotationDescription
public void setTimestampAnnotationDescription(java.lang.String description, int timestampAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of TimestampAnnotation.- Parameters:
description
- Description to set.timestampAnnotationIndex
- the TimestampAnnotation index.
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setTimestampAnnotationID
public void setTimestampAnnotationID(java.lang.String id, int timestampAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of TimestampAnnotation.- Parameters:
id
- ID to set.timestampAnnotationIndex
- the TimestampAnnotation index.
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setTimestampAnnotationNamespace
public void setTimestampAnnotationNamespace(java.lang.String namespace, int timestampAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of TimestampAnnotation.- Parameters:
namespace
- Namespace to set.timestampAnnotationIndex
- the TimestampAnnotation index.
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setTimestampAnnotationValue
Description copied from interface:MetadataStore
Set the Value property of TimestampAnnotation.- Parameters:
value
- Value to set.timestampAnnotationIndex
- the TimestampAnnotation index.
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setTransmittanceRangeCutIn
Description copied from interface:MetadataStore
Set the CutIn property of TransmittanceRange.- Parameters:
cutIn
- CutIn to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
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setTransmittanceRangeCutInTolerance
public void setTransmittanceRangeCutInTolerance(Length cutInTolerance, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the CutInTolerance property of TransmittanceRange.- Parameters:
cutInTolerance
- CutInTolerance to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
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setTransmittanceRangeCutOut
Description copied from interface:MetadataStore
Set the CutOut property of TransmittanceRange.- Parameters:
cutOut
- CutOut to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
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setTransmittanceRangeCutOutTolerance
public void setTransmittanceRangeCutOutTolerance(Length cutOutTolerance, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the CutOutTolerance property of TransmittanceRange.- Parameters:
cutOutTolerance
- CutOutTolerance to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
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setTransmittanceRangeTransmittance
public void setTransmittanceRangeTransmittance(PercentFraction transmittance, int instrumentIndex, int filterIndex)Description copied from interface:MetadataStore
Set the Transmittance property of TransmittanceRange.- Parameters:
transmittance
- Transmittance to set.instrumentIndex
- the Instrument index.filterIndex
- the Filter index.
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setUUIDFileName
public void setUUIDFileName(java.lang.String fileName, int imageIndex, int tiffDataIndex)Description copied from interface:MetadataStore
Set the FileName property of UUID.- Parameters:
fileName
- FileName to set.imageIndex
- the Image index.tiffDataIndex
- the TiffData index.
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setWellAnnotationRef
public void setWellAnnotationRef(java.lang.String annotation, int plateIndex, int wellIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of Well.- Parameters:
annotation
- AnnotationRef to set.plateIndex
- the Plate index.wellIndex
- the Well index.annotationRefIndex
- AnnotationRef index (unused).
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setWellColor
Description copied from interface:MetadataStore
Set the Color property of Well.- Parameters:
color
- Color to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellColumn
Description copied from interface:MetadataStore
Set the Column property of Well.- Parameters:
column
- Column to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellExternalDescription
public void setWellExternalDescription(java.lang.String externalDescription, int plateIndex, int wellIndex)Description copied from interface:MetadataStore
Set the ExternalDescription property of Well.- Parameters:
externalDescription
- ExternalDescription to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellExternalIdentifier
public void setWellExternalIdentifier(java.lang.String externalIdentifier, int plateIndex, int wellIndex)Description copied from interface:MetadataStore
Set the ExternalIdentifier property of Well.- Parameters:
externalIdentifier
- ExternalIdentifier to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellID
public void setWellID(java.lang.String id, int plateIndex, int wellIndex)Description copied from interface:MetadataStore
Set the ID property of Well.- Parameters:
id
- ID to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellReagentRef
public void setWellReagentRef(java.lang.String reagent, int plateIndex, int wellIndex)Description copied from interface:MetadataStore
Set the ReagentRef property of Well.- Parameters:
reagent
- ReagentRef to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellRow
Description copied from interface:MetadataStore
Set the Row property of Well.- Parameters:
row
- Row to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellType
public void setWellType(java.lang.String type, int plateIndex, int wellIndex)Description copied from interface:MetadataStore
Set the Type property of Well.- Parameters:
type
- Type to set.plateIndex
- the Plate index.wellIndex
- the Well index.
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setWellSampleID
public void setWellSampleID(java.lang.String id, int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataStore
Set the ID property of WellSample.- Parameters:
id
- ID to set.plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.
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setWellSampleImageRef
public void setWellSampleImageRef(java.lang.String image, int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataStore
Set the ImageRef property of WellSample.- Parameters:
image
- ImageRef to set.plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.
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setWellSampleIndex
public void setWellSampleIndex(NonNegativeInteger index, int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataStore
Set the Index property of WellSample.- Parameters:
index
- Index to set.plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.
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setWellSamplePositionX
public void setWellSamplePositionX(Length positionX, int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataStore
Set the PositionX property of WellSample.- Parameters:
positionX
- PositionX to set.plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.
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setWellSamplePositionY
public void setWellSamplePositionY(Length positionY, int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataStore
Set the PositionY property of WellSample.- Parameters:
positionY
- PositionY to set.plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.
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setWellSampleTimepoint
public void setWellSampleTimepoint(Timestamp timepoint, int plateIndex, int wellIndex, int wellSampleIndex)Description copied from interface:MetadataStore
Set the Timepoint property of WellSample.- Parameters:
timepoint
- Timepoint to set.plateIndex
- the Plate index.wellIndex
- the Well index.wellSampleIndex
- the WellSample index.
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setXMLAnnotationAnnotationRef
public void setXMLAnnotationAnnotationRef(java.lang.String annotation, int XMLAnnotationIndex, int annotationRefIndex)Description copied from interface:MetadataStore
Set the AnnotationRef property of XMLAnnotation.- Parameters:
annotation
- AnnotationRef to set.XMLAnnotationIndex
- the XMLAnnotation index.annotationRefIndex
- AnnotationRef index (unused).
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setXMLAnnotationAnnotator
public void setXMLAnnotationAnnotator(java.lang.String annotator, int XMLAnnotationIndex)Description copied from interface:MetadataStore
Set the Annotator property of XMLAnnotation.- Parameters:
annotator
- Annotator to set.XMLAnnotationIndex
- the XMLAnnotation index.
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setXMLAnnotationDescription
public void setXMLAnnotationDescription(java.lang.String description, int XMLAnnotationIndex)Description copied from interface:MetadataStore
Set the Description property of XMLAnnotation.- Parameters:
description
- Description to set.XMLAnnotationIndex
- the XMLAnnotation index.
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setXMLAnnotationID
public void setXMLAnnotationID(java.lang.String id, int XMLAnnotationIndex)Description copied from interface:MetadataStore
Set the ID property of XMLAnnotation.- Parameters:
id
- ID to set.XMLAnnotationIndex
- the XMLAnnotation index.
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setXMLAnnotationNamespace
public void setXMLAnnotationNamespace(java.lang.String namespace, int XMLAnnotationIndex)Description copied from interface:MetadataStore
Set the Namespace property of XMLAnnotation.- Parameters:
namespace
- Namespace to set.XMLAnnotationIndex
- the XMLAnnotation index.
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setXMLAnnotationValue
public void setXMLAnnotationValue(java.lang.String value, int XMLAnnotationIndex)Description copied from interface:MetadataStore
Set the Value property of XMLAnnotation.- Parameters:
value
- Value to set.XMLAnnotationIndex
- the XMLAnnotation index.
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