All Classes
| Class | Description |
|---|---|
| AbstractOMEModelObject | |
| AbstractOMEXMLMetadata |
A utility class for constructing and manipulating OME-XML DOMs.
|
| AcquisitionMode | |
| AcquisitionModeEnumHandler |
Enumeration handler for AcquisitionMode.
|
| AffineTransform | |
| AggregateMetadata |
A metadata store which delegates the actual storage to one or more sub
metadata stores.
|
| Angle |
Angle quantity.
|
| Annotation | |
| AnnotationRef | |
| Arc | |
| ArcType | |
| ArcTypeEnumHandler |
Enumeration handler for ArcType.
|
| BaseMetadata |
A proxy capable of bidirectional communication of biological image data to
and from a particular storage medium.
|
| BasicAnnotation | |
| BinaryFile | |
| BinaryOnly | |
| BinData | |
| Binning | |
| BinningEnumHandler |
Enumeration handler for Binning.
|
| BooleanAnnotation | |
| Channel | |
| ChannelRef | |
| Color |
Primitive type that represents an RGBA color.
|
| CommentAnnotation | |
| Compression | |
| CompressionEnumHandler |
Enumeration handler for Compression.
|
| ContrastMethod | |
| ContrastMethodEnumHandler |
Enumeration handler for ContrastMethod.
|
| Correction | |
| CorrectionEnumHandler |
Enumeration handler for Correction.
|
| Dataset | |
| DatasetRef | |
| Detector | |
| DetectorSettings | |
| DetectorType | |
| DetectorTypeEnumHandler |
Enumeration handler for DetectorType.
|
| Dichroic | |
| DichroicRef | |
| DimensionOrder | |
| DimensionOrderEnumHandler |
Enumeration handler for DimensionOrder.
|
| DoubleAnnotation | |
| DummyMetadata |
A dummy implementation for
MetadataStore and
MetadataRetrieve that is used when no other
metadata implementations are available. |
| ElectricPotential |
ElectricPotential quantity.
|
| Ellipse | |
| EmissionFilterRef | |
| Enumeration |
Abstract superclass for all enumerations.
|
| EnumerationException |
EnumerationException is the exception thrown when an enumeration is
invalid or not found.
|
| ExcitationFilterRef | |
| Experiment | |
| Experimenter | |
| ExperimenterGroup | |
| ExperimenterGroupRef | |
| ExperimenterRef | |
| ExperimentRef | |
| ExperimentType | |
| ExperimentTypeEnumHandler |
Enumeration handler for ExperimentType.
|
| External | |
| Filament | |
| FilamentType | |
| FilamentTypeEnumHandler |
Enumeration handler for FilamentType.
|
| FileAnnotation | |
| FillRule | |
| FillRuleEnumHandler |
Enumeration handler for FillRule.
|
| Filter | |
| FilterMetadata |
An implementation of
MetadataStore that removes unprintable
characters from metadata values before storing them in a delegate
MetadataStore. |
| FilterRef | |
| FilterSet | |
| FilterSetRef | |
| FilterType | |
| FilterTypeEnumHandler |
Enumeration handler for FilterType.
|
| Folder | |
| FolderRef | |
| FontFamily | |
| FontFamilyEnumHandler |
Enumeration handler for FontFamily.
|
| FontStyle | |
| FontStyleEnumHandler |
Enumeration handler for FontStyle.
|
| Frequency |
Frequency quantity.
|
| GenericExcitationSource | |
| IEnumerationHandler |
An enumeration provider for making OME data model enumerations available.
|
| IlluminationType | |
| IlluminationTypeEnumHandler |
Enumeration handler for IlluminationType.
|
| Image | |
| ImageRef | |
| ImagingEnvironment | |
| IMetadata |
A proxy capable of bidirectional communication of biological image data to
and from a particular storage medium.
|
| Immersion | |
| ImmersionEnumHandler |
Enumeration handler for Immersion.
|
| Instrument | |
| InstrumentRef | |
| Label | |
| Laser | |
| LaserMedium | |
| LaserMediumEnumHandler |
Enumeration handler for LaserMedium.
|
| LaserType | |
| LaserTypeEnumHandler |
Enumeration handler for LaserType.
|
| Leader | |
| Length |
Length quantity.
|
| LightEmittingDiode | |
| LightPath | |
| LightSource | |
| LightSourceSettings | |
| Line | |
| ListAnnotation | |
| LongAnnotation | |
| ManufacturerSpec | |
| MapAnnotation | |
| MapPair |
Simple string/string container.
|
| Marker | |
| MarkerEnumHandler |
Enumeration handler for Marker.
|
| Mask | |
| Medium | |
| MediumEnumHandler |
Enumeration handler for Medium.
|
| MetadataConverter |
A utility class containing a method for piping a source
MetadataRetrieve object into a destination MetadataStore. |
| MetadataOnly | |
| MetadataRetrieve |
A proxy whose responsibility it is to extract biological image data from a
particular storage medium.
|
| MetadataRoot |
Abstract metadata root node.
|
| MetadataStore |
A proxy whose responsibility it is to marshal biological image data into a
particular storage medium.
|
| MicrobeamManipulation | |
| MicrobeamManipulationRef | |
| MicrobeamManipulationType | |
| MicrobeamManipulationTypeEnumHandler |
Enumeration handler for MicrobeamManipulationType.
|
| Microscope | |
| MicroscopeType | |
| MicroscopeTypeEnumHandler |
Enumeration handler for MicroscopeType.
|
| NamingConvention | |
| NamingConventionEnumHandler |
Enumeration handler for NamingConvention.
|
| NonNegativeFloat |
A float whose constraints are bound to Java's 64-bit float (double) and a
further non-negative restriction.
|
| NonNegativeInteger |
An integer whose constraints are bound to Java's 32-bit signed integer type
and a further non-negative restriction.
|
| NonNegativeLong |
An integer whose constraints are bound to Java's 64-bit signed integer type
and a further non-negative restriction.
|
| NumericAnnotation | |
| Objective | |
| ObjectiveSettings | |
| OME | |
| OMEModel | |
| OMEModelImpl | |
| OMEModelObject | |
| OMEXMLMetadata |
A utility class for constructing and manipulating OME-XML DOMs.
|
| OMEXMLMetadataImpl |
A metadata store implementation for constructing and manipulating OME-XML
DOMs for the current version of OME-XML.
|
| OMEXMLMetadataRoot |
A utility class for constructing and manipulating OME-XML DOMs.
|
| PercentFraction |
A floating point value whose constraints are bound to Java's 32-bit floating
point type and a further 0.0f minimum and 1.0f maximum.
|
| Pixels | |
| PixelType | |
| PixelTypeEnumHandler |
Enumeration handler for PixelType.
|
| Plane | |
| Plate | |
| PlateAcquisition | |
| PlateRef | |
| Point | |
| Polygon | |
| Polyline | |
| PositiveFloat |
A float whose constraints are bound to Java's 64-bit float (double) and a
further positive restriction.
|
| PositiveInteger |
An integer whose constraints are bound to Java's 32-bit signed integer type
and a further positive restriction.
|
| PositiveLong |
An integer whose constraints are bound to Java's 64-bit signed integer type
and a further positive restriction.
|
| Power |
Power quantity.
|
| Pressure |
Pressure quantity.
|
| PrimitiveNumber |
A primitive type from an XSD definition with a given set of constraints.
|
| PrimitiveType<T> |
A primitive type from an XSD definition with a given set of constraints.
|
| Project | |
| ProjectRef | |
| Pulse | |
| PulseEnumHandler |
Enumeration handler for Pulse.
|
| Pump | |
| Quantity |
An abstract quantity.
|
| Reagent | |
| ReagentRef | |
| Rectangle | |
| Reference | |
| ReferenceList<T> | |
| Rights | |
| ROI | |
| ROIRef | |
| Screen | |
| Settings | |
| Shape | |
| StageLabel | |
| StructuredAnnotations | |
| TagAnnotation | |
| Temperature |
Temperature quantity.
|
| TermAnnotation | |
| TextAnnotation | |
| TiffData | |
| Time |
Time quantity.
|
| Timestamp |
Primitive type that represents an ISO 8601 timestamp.
|
| TimestampAnnotation | |
| TransmittanceRange | |
| TypeAnnotation | |
| Union | |
| Unit<Q extends Quantity> |
Unit of measurement.
|
| UNITS |
Defines unit constants corresponding to unit classes in ome.units.unit.*
|
| UnitsElectricPotential | |
| UnitsElectricPotentialEnumHandler |
Enumeration handler for UnitsElectricPotential.
|
| UnitsFrequency | |
| UnitsFrequencyEnumHandler |
Enumeration handler for UnitsFrequency.
|
| UnitsLength | |
| UnitsLengthEnumHandler |
Enumeration handler for UnitsLength.
|
| UnitsPower | |
| UnitsPowerEnumHandler |
Enumeration handler for UnitsPower.
|
| UnitsPressure | |
| UnitsPressureEnumHandler |
Enumeration handler for UnitsPressure.
|
| UnitsTemperature | |
| UnitsTemperatureEnumHandler |
Enumeration handler for UnitsTemperature.
|
| UnitsTime | |
| UnitsTimeEnumHandler |
Enumeration handler for UnitsTime.
|
| UUID | |
| Well | |
| WellSample | |
| WellSampleRef | |
| XMLAnnotation | |
| XMLMockObjects |
Creates XML objects for the 2010-06 schema.
|
| XMLWriter |
Methods to write the XML tags to the files.
|