A B C D E F G H I J K L M N O P Q R S T U V W X 
All Classes All Packages

A

abbreviate(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Abbreviates a String using ellipses.
abbreviate(String, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Abbreviates a String using ellipses.
abbreviate(String, int, int, String) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Abbreviates a string nicely.
abbreviateMiddle(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Abbreviates a String to the length passed, replacing the middle characters with the supplied replacement String.
accept(Field) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Returns whether or not to append the given Field.
accumulateAllNamespaces(Document) - Static method in class org.openprovenance.prov.model.NamespaceGatherer
Accumulate all namespace declarations in a single Namespace instance.
ActedOnBehalfOf - Class in org.openprovenance.prov.vanilla
 
ActedOnBehalfOf - Interface in org.openprovenance.prov.model
Interface for the PROV Delegation association.
ActedOnBehalfOf(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
ActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
activity - Variable in class org.openprovenance.prov.vanilla.Used
 
activity - Variable in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
activity - Variable in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
activity - Variable in class org.openprovenance.prov.vanilla.WasEndedBy
 
activity - Variable in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
activity - Variable in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
activity - Variable in class org.openprovenance.prov.vanilla.WasStartedBy
 
Activity - Class in org.openprovenance.prov.vanilla
 
Activity - Interface in org.openprovenance.prov.model
Interface for the PROV Activity complex type.
Activity() - Constructor for class org.openprovenance.prov.vanilla.Activity
 
Activity(QualifiedName, XMLGregorianCalendar, XMLGregorianCalendar, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.Activity
 
add(boolean[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(boolean[], int, boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(byte[], byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(byte[], int, byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(char[], char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(char[], int, char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(double[], double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(double[], int, double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(float[], float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(float[], int, float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(int[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(int[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(long[], int, long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(long[], long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(short[], int, short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(short[], short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(Object) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Unsupported ListIterator operation.
add(Object[], int, Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Inserts the specified element at the specified position in the array.
add(Object[], Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Copies the given array and adds the given element at the end of the new array.
add(String) - Method in class org.openprovenance.apache.commons.lang.CharSet
Add a set definition string to the CharSet.
add(ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(Agent) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(AlternateOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(HadMember) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(QualifiedName, Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(QualifiedName, Agent) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(QualifiedName, Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(SpecializationOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(Used) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasAssociatedWith) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasAttributedTo) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasDerivedFrom) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasEndedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasGeneratedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasInfluencedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasInformedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasInvalidatedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(WasStartedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
add(T, int, Collection<T>, HashMap<QualifiedName, Collection<T>>, HashMap<QualifiedName, Collection<T>>, HashMap<QualifiedName, Collection<T>>) - Method in class org.openprovenance.prov.model.IndexedDocument
Add an edge to the graph.
addAll(boolean[], boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(byte[], byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(char[], char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(double[], double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(float[], float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(int[], int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(long[], long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(short[], short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAll(Object[], Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Adds all the elements of the given arrays into a new array.
addAttribute(HasOther, Other) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(ActedOnBehalfOf, ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(Activity, Activity) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(Agent, Agent) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(Entity, Entity) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(Used, Used) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasAssociatedWith, WasAssociatedWith) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasAttributedTo, WasAttributedTo) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasDerivedFrom, WasDerivedFrom) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasEndedBy, WasEndedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasGeneratedBy, WasGeneratedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasInfluencedBy, WasInfluencedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasInformedBy, WasInformedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasInvalidatedBy, WasInvalidatedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
addAttributes(WasStartedBy, WasStartedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
addBundleType(HasType) - Method in class org.openprovenance.prov.model.ProvFactory
 
addCauseMethodName(String) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Adds to the list of method names used in the search for Throwable objects.
addKnownNamespaces() - Method in class org.openprovenance.prov.model.Namespace
 
addLabel(HasLabel, String) - Method in class org.openprovenance.prov.model.ProvFactory
 
addLabel(HasLabel, String, String) - Method in class org.openprovenance.prov.model.ProvFactory
 
addPrimarySourceType(HasType) - Method in class org.openprovenance.prov.model.ProvFactory
 
addQuotationType(HasType) - Method in class org.openprovenance.prov.model.ProvFactory
 
addRevisionType(HasType) - Method in class org.openprovenance.prov.model.ProvFactory
 
addRole(HasRole, Role) - Method in class org.openprovenance.prov.model.ProvFactory
 
addType(HasType, Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
addType(HasType, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
addType(HasType, Type) - Method in class org.openprovenance.prov.model.ProvFactory
 
agent - Variable in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
agent - Variable in class org.openprovenance.prov.vanilla.WasAttributedTo
 
Agent - Class in org.openprovenance.prov.vanilla
 
Agent - Interface in org.openprovenance.prov.model
Interface for the PROV Agent complex type.
Agent(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.Agent
 
ALL_PROV_INPUT_MEDIA_TYPES - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
All Media Types accepted as input for PROV.
ALL_PROV_OUTPUT_MEDIA_TYPES - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
alternate1 - Variable in class org.openprovenance.prov.vanilla.AlternateOf
 
alternate1 - Variable in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
alternate2 - Variable in class org.openprovenance.prov.vanilla.AlternateOf
 
alternate2 - Variable in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
AlternateOf - Class in org.openprovenance.prov.vanilla
 
AlternateOf - Interface in org.openprovenance.prov.model
Interface for PROV Alternate association.
AlternateOf(QualifiedName, QualifiedName) - Constructor for class org.openprovenance.prov.vanilla.AlternateOf
 
append(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a boolean.
append(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a boolean value.
append(boolean) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a boolean value to the string builder.
append(boolean[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a boolean array.
append(boolean[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a boolean array.
append(boolean[], boolean[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of boolean.
append(boolean, boolean) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two booleanss are equal.
append(byte) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a byte.
append(byte) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a byte value.
append(byte[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a byte array.
append(byte[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a byte array.
append(byte[], byte[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of byte.
append(byte, byte) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two bytes are equal.
append(char) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a char.
append(char) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a char value.
append(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a char value to the string builder.
append(char[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a char array.
append(char[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a char array.
append(char[]) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a char array to the string builder.
append(char[], char[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of char.
append(char[], int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a char array to the string builder.
append(char, char) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two chars are equal.
append(double) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a double.
append(double) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a double value.
append(double) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a double value to the string builder using String.valueOf.
append(double[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a double array.
append(double[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a double array.
append(double[], double[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of double.
append(double, double) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two doubles are equal by testing that the pattern of bits returned by doubleToLong are equal.
append(float) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a float.
append(float) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a float value.
append(float) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a float value to the string builder using String.valueOf.
append(float[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a float array.
append(float[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a float array.
append(float[], float[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of float.
append(float, float) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two floats are equal byt testing that the pattern of bits returned by doubleToLong are equal.
append(int) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for an int.
append(int) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an int value.
append(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an int value to the string builder using String.valueOf.
append(int[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for an int array.
append(int[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an int array.
append(int[], int[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of int.
append(int, int) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two ints are equal.
append(long) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a long.
append(long) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a long value.
append(long) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a long value to the string builder using String.valueOf.
append(long[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a long array.
append(long[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a long array.
append(long[], long[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of long.
append(long, long) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two long s are equal.
append(short) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a short.
append(short) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a short value.
append(short[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for a short array.
append(short[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a short array.
append(short[], short[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Deep comparison of array of short.
append(short, short) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two shorts are equal.
append(Object) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for an Object.
append(Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an Object value.
append(Object) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an object to this string builder.
append(Object[]) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Append a hashCode for an Object array.
append(Object[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an Object array.
append(Object[], Object[]) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Performs a deep comparison of two Object arrays.
append(Object, Object) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Test if two Objects are equal using their equals method.
append(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a string to this string builder.
append(StringBuffer) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a string buffer to this string builder.
append(StringBuffer, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends part of a string buffer to this string builder.
append(StringBuffer, String, boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a boolean value.
append(StringBuffer, String, boolean[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a boolean array.
append(StringBuffer, String, byte) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a byte value.
append(StringBuffer, String, byte[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a byte array.
append(StringBuffer, String, char) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a char value.
append(StringBuffer, String, char[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a char array.
append(StringBuffer, String, double) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a double value.
append(StringBuffer, String, double[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a double array.
append(StringBuffer, String, float) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a float value.
append(StringBuffer, String, float[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a float array.
append(StringBuffer, String, int) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an int value.
append(StringBuffer, String, int[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an int array.
append(StringBuffer, String, long) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a long value.
append(StringBuffer, String, long[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a long array.
append(StringBuffer, String, short) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a short value.
append(StringBuffer, String, short[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a short array.
append(StringBuffer, String, Object[], Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an Object array.
append(StringBuffer, String, Object, Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an Object value, printing the full toString of the Object passed in.
append(String, boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a boolean value.
append(String, boolean[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a boolean array.
append(String, boolean[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a boolean array.
append(String, byte) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an byte value.
append(String, byte[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a byte array.
append(String, byte[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a byte array.
append(String, char) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a char value.
append(String, char[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a char array.
append(String, char[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a char array.
append(String, double) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a double value.
append(String, double[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a double array.
append(String, double[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a double array.
append(String, float) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an float value.
append(String, float[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a float array.
append(String, float[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a float array.
append(String, int) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an int value.
append(String, int[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an int array.
append(String, int[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an int array.
append(String, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends part of a string to this string builder.
append(String, long) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a long value.
append(String, long[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a long array.
append(String, long[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a long array.
append(String, short) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an short value.
append(String, short[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a short array.
append(String, short[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString a short array.
append(String, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an Object value.
append(String, Object[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an Object array.
append(String, Object[], boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an Object array.
append(String, Object, boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append to the toString an Object value.
append(StrBuilder) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends another string builder to this string builder.
append(StrBuilder, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends part of a string builder to this string builder.
appendAll(Object[]) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends each item in an array to the builder without any separators.
appendAll(Collection) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends each item in a collection to the builder without any separators.
appendAll(Iterator) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends each item in an iterator to the builder without any separators.
appendAsObjectToString(Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Appends with the same format as the default Object toString() method.
appendClassName(StringBuffer, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the class name.
appendContentEnd(StringBuffer) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the content end.
appendContentStart(StringBuffer) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the content start.
appendCyclicObject(StringBuffer, String, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an Object value that has been detected to participate in a cycle.
appendDetail(StringBuffer, String, boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a boolean value.
appendDetail(StringBuffer, String, boolean[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a boolean array.
appendDetail(StringBuffer, String, byte) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a byte value.
appendDetail(StringBuffer, String, byte[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a byte array.
appendDetail(StringBuffer, String, char) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a char value.
appendDetail(StringBuffer, String, char[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a char array.
appendDetail(StringBuffer, String, double) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a double value.
appendDetail(StringBuffer, String, double[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a double array.
appendDetail(StringBuffer, String, float) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a float value.
appendDetail(StringBuffer, String, float[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a float array.
appendDetail(StringBuffer, String, int) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an int value.
appendDetail(StringBuffer, String, int[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of an int array.
appendDetail(StringBuffer, String, long) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a long value.
appendDetail(StringBuffer, String, long[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a long array.
appendDetail(StringBuffer, String, short) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a short value.
appendDetail(StringBuffer, String, short[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of a short array.
appendDetail(StringBuffer, String, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an Object value, printing the full detail of the Object.
appendDetail(StringBuffer, String, Object[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of an Object array.
appendDetail(StringBuffer, String, Collection) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a Collection.
appendDetail(StringBuffer, String, Map) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a Map.
appendEnd(StringBuffer, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the end of data indicator.
appendFieldEnd(StringBuffer, String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the field end.
appendFieldSeparator(StringBuffer) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the field separator.
appendFieldsIn(Class) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Appends the fields and values defined by the given object of the given Class.
appendFieldStart(StringBuffer, String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the field start.
appendFixedWidthPadLeft(int, int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an object to the builder padding on the left to a fixed width.
appendFixedWidthPadLeft(Object, int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an object to the builder padding on the left to a fixed width.
appendFixedWidthPadRight(int, int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an object to the builder padding on the right to a fixed length.
appendFixedWidthPadRight(Object, int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an object to the builder padding on the right to a fixed length.
appendIdentityHashCode(StringBuffer, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
appendIdentityToString(StringBuffer, Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Deprecated.
The design of this method is bad - see LANG-360. Instead, use identityToString(StringBuffer, Object).
appendInternal(StringBuffer, String, Object, boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an Object, correctly interpreting its type.
appendln(boolean) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a boolean value followed by a new line to the string builder.
appendln(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a char value followed by a new line to the string builder.
appendln(char[]) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a char array followed by a new line to the string builder.
appendln(char[], int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a char array followed by a new line to the string builder.
appendln(double) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a double value followed by a new line to the string builder using String.valueOf.
appendln(float) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a float value followed by a new line to the string builder using String.valueOf.
appendln(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an int value followed by a new line to the string builder using String.valueOf.
appendln(long) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a long value followed by a new line to the string builder using String.valueOf.
appendln(Object) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an object followed by a new line to this string builder.
appendln(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a string followed by a new line to this string builder.
appendln(StringBuffer) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a string buffer followed by a new line to this string builder.
appendln(StringBuffer, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends part of a string buffer followed by a new line to this string builder.
appendln(String, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends part of a string followed by a new line to this string builder.
appendln(StrBuilder) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends another string builder followed by a new line to this string builder.
appendln(StrBuilder, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends part of a string builder followed by a new line to this string builder.
appendNewLine() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends the new line string to this string builder.
appendNull() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends the text representing null to this string builder.
appendNullText(StringBuffer, String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an indicator for null.
appendPadding(int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends the pad character to the builder the specified number of times.
appendSeparator(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a separator if the builder is currently non-empty.
appendSeparator(char, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Append one of both separators to the builder If the builder is currently empty it will append the defaultIfEmpty-separator Otherwise it will append the standard-separator The separator is appended using StrBuilder.append(char).
appendSeparator(char, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a separator to the builder if the loop index is greater than zero.
appendSeparator(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a separator if the builder is currently non-empty.
appendSeparator(String, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a separator to the builder if the loop index is greater than zero.
appendSeparator(String, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends one of both separators to the StrBuilder.
appendStart(StringBuffer, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the start of data indicator.
appendSummary(StringBuffer, String, boolean[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a boolean array.
appendSummary(StringBuffer, String, byte[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a byte array.
appendSummary(StringBuffer, String, char[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a char array.
appendSummary(StringBuffer, String, double[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a double array.
appendSummary(StringBuffer, String, float[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a float array.
appendSummary(StringBuffer, String, int[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of an int array.
appendSummary(StringBuffer, String, long[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a long array.
appendSummary(StringBuffer, String, short[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of a short array.
appendSummary(StringBuffer, String, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString an Object value, printing a summary of the Object.
appendSummary(StringBuffer, String, Object[]) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a summary of an Object array.
appendSummarySize(StringBuffer, String, int) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString a size summary.
appendSuper(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Adds the result of super.equals() to this builder.
appendSuper(int) - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Adds the result of super.hashCode() to this builder.
appendSuper(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append the toString from the superclass.
appendSuper(StringBuffer, String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the superclass toString.
appendToString(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Append the toString from another object.
appendToString(StringBuffer, String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString another toString.
appendWithSeparators(Object[], String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an array placing separators between each value, but not before the first or after the last.
appendWithSeparators(Collection, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends a collection placing separators between each value, but not before the first or after the last.
appendWithSeparators(Iterator, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Appends an iterator placing separators between each value, but not before the first or after the last.
ArrayUtils - Class in org.openprovenance.apache.commons.lang
Operations on arrays, primitive arrays (like int[]) and primitive wrapper arrays (like Integer[]).
ArrayUtils() - Constructor for class org.openprovenance.apache.commons.lang.ArrayUtils
ArrayUtils instances should NOT be constructed in standard programming.
ASCII_ALPHA - Static variable in class org.openprovenance.apache.commons.lang.CharSet
A CharSet defining ASCII alphabetic characters "a-zA-Z".
ASCII_ALPHA_LOWER - Static variable in class org.openprovenance.apache.commons.lang.CharSet
A CharSet defining ASCII alphabetic characters "a-z".
ASCII_ALPHA_UPPER - Static variable in class org.openprovenance.apache.commons.lang.CharSet
A CharSet defining ASCII alphabetic characters "A-Z".
ASCII_NUMERIC - Static variable in class org.openprovenance.apache.commons.lang.CharSet
A CharSet defining ASCII alphabetic characters "0-9".
asReader() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the contents of this builder as a Reader.
asTokenizer() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Creates a tokenizer that can tokenize the contents of this builder.
asWriter() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets this builder as a Writer that can be written to.
AtomConstructor - Interface in org.openprovenance.prov.model
 
Attribute - Interface in org.openprovenance.prov.model
Interface for a PROV attribute-value pair.
Attribute.AttributeKind - Enum in org.openprovenance.prov.model
Enumerated type for all types of attributes.
AttributeProcessor - Class in org.openprovenance.prov.model
Helper class to process attributes of a Statement.
AttributeProcessor(List<Other>) - Constructor for class org.openprovenance.prov.model.AttributeProcessor
 
attributesWithNamespace(String) - Method in class org.openprovenance.prov.model.AttributeProcessor
 
attributesWithNamespace(HasOther, String) - Method in class org.openprovenance.prov.model.ProvUtilities
 
AWT_TOOLKIT - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The awt.toolkit System Property.

B

base64Decoding(String) - Method in interface org.openprovenance.prov.model.LiteralConstructor
 
base64Decoding(String) - Method in class org.openprovenance.prov.model.ProvFactory
 
base64Encoding(byte[]) - Method in class org.openprovenance.prov.model.ProvFactory
 
BeanTraversal - Class in org.openprovenance.prov.model
Generic Traversal of a PROV model bean.
BeanTraversal(ModelConstructor, ProvFactory) - Constructor for class org.openprovenance.prov.model.BeanTraversal
 
BOOK_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
BOOK_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
BooleanUtils - Class in org.openprovenance.apache.commons.lang
Operations on boolean primitives and Boolean objects.
BooleanUtils() - Constructor for class org.openprovenance.apache.commons.lang.BooleanUtils
BooleanUtils instances should NOT be constructed in standard programming.
buffer - Variable in class org.openprovenance.apache.commons.lang.text.StrBuilder
Internal data storage.
builder - Static variable in class org.openprovenance.prov.model.DOMProcessing
 
Bundle - Class in org.openprovenance.prov.vanilla
 
Bundle - Interface in org.openprovenance.prov.model
Interface for a PROV Bundle.
Bundle() - Constructor for class org.openprovenance.prov.vanilla.Bundle
 
Bundle(QualifiedName, Namespace, Collection<Statement>) - Constructor for class org.openprovenance.prov.vanilla.Bundle
 
BYTE_MINUS_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Byte constant for minus one.
BYTE_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Byte constant for one.
BYTE_ZERO - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Byte constant for zero.

C

capacity() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the current size of the internal character array buffer.
capitalise(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the standardly named StringUtils.capitalize(String). Method will be removed in Commons Lang 3.0.
capitaliseAllWords(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the relocated WordUtils.capitalize(String). Method will be removed in Commons Lang 3.0.
capitalize(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Capitalizes a String changing the first letter to title case as per Character.toTitleCase(char).
capitalize(String) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Capitalizes all the whitespace separated words in a String.
capitalize(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Capitalizes all the delimiter separated words in a String.
capitalizeFully(String) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Converts all the whitespace separated words in a String into capitalized words, that is each word is made up of a titlecase character and then a series of lowercase characters.
capitalizeFully(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Converts all the delimiter separated words in a String into capitalized words, that is each word is made up of a titlecase character and then a series of lowercase characters.
castToStringOrLangStringOrQualifiedName(Object, QualifiedName) - Static method in class org.openprovenance.prov.vanilla.TypedValue
 
center(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Centers a String in a larger String of size size using the space character (' ').
center(String, int, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Centers a String in a larger String of size size.
center(String, int, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Centers a String in a larger String of size size.
charAt(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the character at the specified index.
charMatcher(char) - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Constructor that creates a matcher from a character.
CharRange - Class in org.openprovenance.apache.commons.lang
A contiguous range of characters, optionally negated.
CharRange(char) - Constructor for class org.openprovenance.apache.commons.lang.CharRange
Constructs a CharRange over a single character.
CharRange(char, boolean) - Constructor for class org.openprovenance.apache.commons.lang.CharRange
Constructs a CharRange over a single character, optionally negating the range.
CharRange(char, char) - Constructor for class org.openprovenance.apache.commons.lang.CharRange
Constructs a CharRange over a set of characters.
CharRange(char, char, boolean) - Constructor for class org.openprovenance.apache.commons.lang.CharRange
Constructs a CharRange over a set of characters, optionally negating the range.
CharSet - Class in org.openprovenance.apache.commons.lang
A set of characters.
CharSet(String) - Constructor for class org.openprovenance.apache.commons.lang.CharSet
Constructs a new CharSet using the set syntax.
CharSet(String[]) - Constructor for class org.openprovenance.apache.commons.lang.CharSet
Constructs a new CharSet using the set syntax.
charSetMatcher(char[]) - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Constructor that creates a matcher from a set of characters.
charSetMatcher(String) - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Constructor that creates a matcher from a string representing a set of characters.
CharSetUtils - Class in org.openprovenance.apache.commons.lang
Operations on CharSets.
CharSetUtils() - Constructor for class org.openprovenance.apache.commons.lang.CharSetUtils
CharSetUtils instances should NOT be constructed in standard programming.
CharUtils - Class in org.openprovenance.apache.commons.lang
Operations on char primitives and Character objects.
CharUtils() - Constructor for class org.openprovenance.apache.commons.lang.CharUtils
CharUtils instances should NOT be constructed in standard programming.
check(String, String) - Method in class org.openprovenance.prov.model.Namespace
 
check(Document, Document) - Method in class org.openprovenance.prov.model.DocumentEquality
 
chomp(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes one newline from end of a String if it's there, otherwise leave it alone.
chomp(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes separator from the end of str if it's there, otherwise leave it alone.
chompLast(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.chomp(String) instead. Method will be removed in Commons Lang 3.0.
chompLast(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.chomp(String,String) instead. Method will be removed in Commons Lang 3.0.
chop(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Remove the last character from a String.
chopNewline(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.chomp(String) instead. Method will be removed in Commons Lang 3.0.
ClassUtils - Class in org.openprovenance.apache.commons.lang
Operates on classes without using reflection.
ClassUtils() - Constructor for class org.openprovenance.apache.commons.lang.ClassUtils
ClassUtils instances should NOT be constructed in standard programming.
clean(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the clearer named StringUtils.trimToEmpty(String). Method will be removed in Commons Lang 3.0.
clear() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Clears the string builder (convenience Collections API style method).
clone() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Clone this object.
clone() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Creates a new instance of this Tokenizer.
clone(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Clones an array returning a typecast result and handling null.
clone(Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Clone an object.
clone(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Shallow clones an array returning a typecast result and handling null.
CloneFailedException - Exception in org.openprovenance.apache.commons.lang.exception
Exception thrown when a clone cannot be created.
CloneFailedException(String) - Constructor for exception org.openprovenance.apache.commons.lang.exception.CloneFailedException
Constructs a CloneFailedException.
CloneFailedException(String, Throwable) - Constructor for exception org.openprovenance.apache.commons.lang.exception.CloneFailedException
Constructs a CloneFailedException.
CloneFailedException(Throwable) - Constructor for exception org.openprovenance.apache.commons.lang.exception.CloneFailedException
Constructs a CloneFailedException.
cloneIfPossible(Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Clone an object if possible.
Cloner() - Constructor for class org.openprovenance.prov.model.ProvFactory.Cloner
 
collection - Variable in class org.openprovenance.prov.vanilla.HadMember
 
collection - Variable in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
commaMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns a matcher which matches the comma character.
COMMON - Static variable in class org.openprovenance.apache.commons.lang.CharSet
A Map of the common cases used in the factory.
compare(double, double) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Compares two doubles for order.
compare(float, float) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Compares two floats for order.
compare(Comparable, Comparable) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Null safe comparison of Comparables.
compare(Comparable, Comparable, boolean) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Null safe comparison of Comparables.
concatenate(Object[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the better named StringUtils.join(Object[]) instead. Method will be removed in Commons Lang 3.0.
Configuration - Class in org.openprovenance.prov.configuration
 
Configuration() - Constructor for class org.openprovenance.prov.configuration.Configuration
 
contains(boolean[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(byte[], byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(char) - Method in class org.openprovenance.apache.commons.lang.CharRange
Is the character specified contained in this range.
contains(char) - Method in class org.openprovenance.apache.commons.lang.CharSet
Does the CharSet contain the specified character ch.
contains(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks if the string builder contains the specified char.
contains(char[], char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(double[], double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(double[], double, double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if a value falling within the given tolerance is in the given array.
contains(float[], float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(int[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(long[], long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(short[], short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the value is in the given array.
contains(Object[], Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if the object is in the given array.
contains(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks if the string builder contains the specified string.
contains(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if String contains a search character, handling null.
contains(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if String contains a search String, handling null.
contains(CharRange) - Method in class org.openprovenance.apache.commons.lang.CharRange
Are all the characters of the passed in range contained in this range.
contains(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks if the string builder contains a string matched using the specified matcher.
containsAny(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains any character in the given set of characters.
containsAny(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains any character in the given set of characters.
containsIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if String contains a search String irrespective of case, handling null.
containsNone(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks that the String does not contain certain characters.
containsNone(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks that the String does not contain certain characters.
containsOnly(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only certain characters.
containsOnly(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only certain characters.
convertAttributes(HasOther, List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
convertClassesToClassNames(List) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Given a List of Class objects, this method converts them into class names.
convertClassNamesToClasses(List) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Given a List of class names, this method converts them into classes.
ConverterException - Exception in org.openprovenance.prov.model.exception
An exception occurring during value conversion.
ConverterException() - Constructor for exception org.openprovenance.prov.model.exception.ConverterException
 
ConverterException(String) - Constructor for exception org.openprovenance.prov.model.exception.ConverterException
 
ConverterException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.ConverterException
 
ConverterException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.ConverterException
 
convertLabelAttributes(HasLabel, List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
convertLocationAttributes(HasLocation, List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
convertNsFromXml(String) - Method in class org.openprovenance.prov.model.DOMProcessing
 
convertNsToXml(String) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
convertRoleAttributes(HasRole, List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
convertToJava(QualifiedName, String) - Method in class org.openprovenance.prov.model.ValueConverter
Converts a string into a Java object, according to type provided.
convertTypeAttributes(HasType, List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
convertValueAttributes(HasValue, List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
convertValueToObject(ValueConverter) - Method in interface org.openprovenance.prov.model.TypedValue
Converts the value associated with the value property into a Java object.
convertValueToObject(ValueConverter) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
convertXMLLiteral(String) - Method in class org.openprovenance.prov.model.ValueConverter
 
copyAttributes(List<Attribute>) - Method in class org.openprovenance.prov.model.BeanTraversal
 
copyQ(QualifiedName) - Method in class org.openprovenance.prov.model.BeanTraversal
 
copyValue(Object) - Method in class org.openprovenance.prov.model.BeanTraversal
 
count(String, String) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Takes an argument in set-syntax, see evaluateSet, and returns the number of characters present in the specified string.
count(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Takes an argument in set-syntax, see evaluateSet, and returns the number of characters present in the specified string.
countMatches(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Counts how many times the substring appears in the larger String.
CR - Static variable in class org.openprovenance.apache.commons.lang.CharUtils
carriage return CR ('\r').
createActedOnBehalfOf() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createActivity() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createAgent() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createAlternateOf() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createBigDecimal(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a BigDecimal.
createBigInteger(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a BigInteger.
createDerivedByInsertionFrom() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createDerivedByRemovalFrom() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createDictionaryMembership() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createDocument() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createDouble(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a Double.
createEntity() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createEntry() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createFloat(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a Float.
createHadMember() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createInteger(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a Integer, handling hex and octal notations.
createInternationalizedString() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createKey() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createLocation() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createLong(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a Long.
createMentionOf() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createNamedBundle() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createNumber(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Turns a string value into a java.lang.Number.
createOther() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createQualifiedAlternateOf() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createQualifiedHadMember() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createQualifiedSpecializationOf() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createRole() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createSpecializationOf() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createType() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createTypedValue() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createUsed() - Method in interface org.openprovenance.prov.model.ObjectFactory
Create an instance of Used
createValue() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasAssociatedWith() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasAttributedTo() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasDerivedFrom() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasEndedBy() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasGeneratedBy() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasInfluencedBy() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasInformedBy() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasInvalidatedBy() - Method in interface org.openprovenance.prov.model.ObjectFactory
 
createWasStartedBy() - Method in interface org.openprovenance.prov.model.ObjectFactory
 

D

dataFactory - Variable in class org.openprovenance.prov.model.ProvFactory
 
DEFAULT_STYLE - Static variable in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
The default toString style.
defaultIfBlank(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Returns either the passed in String, or if the String is whitespace, empty ("") or null, the value of defaultStr.
defaultIfEmpty(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Returns either the passed in String, or if the String is empty or null, the value of defaultStr.
defaultIfNull(Object, Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Returns a default value if the object passed is null.
defaultString(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Returns either the passed in String, or if the String is null, an empty String ("").
defaultString(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Returns either the passed in String, or if the String is null, the value of defaultStr.
delegate - Variable in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
The helper instance which contains much of the code which we delegate to.
delegate - Variable in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
delete(int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the characters between the two specified indices.
delete(String, String) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Takes an argument in set-syntax, see evaluateSet, and deletes any of characters present in the specified string.
delete(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Takes an argument in set-syntax, see evaluateSet, and deletes any of characters present in the specified string.
deleteAll(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the character wherever it occurs in the builder.
deleteAll(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the string wherever it occurs in the builder.
deleteAll(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes all parts of the builder that the matcher matches.
deleteCharAt(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the character at the specified index.
deleteFirst(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the character wherever it occurs in the builder.
deleteFirst(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the string wherever it occurs in the builder.
deleteFirst(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Deletes the first match within the builder using the specified matcher.
deleteSpaces(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the better localized StringUtils.deleteWhitespace(String). Method will be removed in Commons Lang 3.0.
deleteWhitespace(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deletes all whitespaces from a String as defined by Character.isWhitespace(char).
DerivedByInsertionFrom - Interface in org.openprovenance.prov.model
Interface for PROV Dictionary Insertion.
DerivedByRemovalFrom - Interface in org.openprovenance.prov.model
Interface for PROV Dictionary Removal.
deserialiseDocument(InputStream) - Method in interface org.openprovenance.prov.model.ProvDeserialiser
Deerializes a document from a stream
DictionaryMembership - Interface in org.openprovenance.prov.model
Interface for PROV Dictionary Membership
difference(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Compares two Strings, and returns the portion where they differ.
distribute(QualifiedName, Collection<Attribute>, Collection<LangString>, Collection<Value>, Collection<Location>, Collection<Type>, Collection<Role>, Collection<Other>) - Method in class org.openprovenance.prov.vanilla.ProvUtilities
 
doAction(ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(ActedOnBehalfOf) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(ActedOnBehalfOf) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(Activity) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(Activity) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(Activity) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(Activity) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(Activity) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(Agent) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(Agent) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(Agent) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(Agent) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(Agent) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(Agent) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(AlternateOf) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(AlternateOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(AlternateOf) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(AlternateOf) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(AlternateOf) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(AlternateOf) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(Bundle, ProvUtilities) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(Bundle, ProvUtilities) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(Bundle, ProvUtilities) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(Bundle, ProvUtilities) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(Bundle, ProvUtilities) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(Bundle, ProvUtilities) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(DerivedByInsertionFrom) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(DerivedByInsertionFrom) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(DerivedByInsertionFrom) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(DerivedByInsertionFrom) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(DerivedByInsertionFrom) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(DerivedByInsertionFrom) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(DerivedByRemovalFrom) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(DerivedByRemovalFrom) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(DerivedByRemovalFrom) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(DerivedByRemovalFrom) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(DerivedByRemovalFrom) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(DerivedByRemovalFrom) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(DictionaryMembership) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(DictionaryMembership) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(DictionaryMembership) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(DictionaryMembership) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(DictionaryMembership) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(DictionaryMembership) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(Document) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(Entity) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(Entity) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(Entity) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(Entity) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(Entity) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(QualifiedAlternateOf) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(QualifiedAlternateOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(QualifiedAlternateOf) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(QualifiedAlternateOf) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(QualifiedAlternateOf) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(QualifiedAlternateOf) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(QualifiedHadMember) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(QualifiedHadMember) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(QualifiedHadMember) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(QualifiedHadMember) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(QualifiedHadMember) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(QualifiedHadMember) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(QualifiedSpecializationOf) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(QualifiedSpecializationOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(QualifiedSpecializationOf) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(QualifiedSpecializationOf) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(QualifiedSpecializationOf) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(QualifiedSpecializationOf) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(HadMember) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(HadMember) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(HadMember) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(HadMember) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(HadMember) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(HadMember) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(MentionOf) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(MentionOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(MentionOf) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(MentionOf) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(MentionOf) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(MentionOf) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(SpecializationOf) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(SpecializationOf) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(SpecializationOf) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(SpecializationOf) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(SpecializationOf) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(SpecializationOf) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(StatementOrBundle, StatementAction) - Method in class org.openprovenance.prov.model.ProvUtilities
 
doAction(StatementOrBundle, StatementActionValue) - Method in class org.openprovenance.prov.model.ProvUtilities
 
doAction(Used) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(Used) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(Used) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(Used) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(Used) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(Used) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasAssociatedWith) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasAssociatedWith) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasAssociatedWith) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasAssociatedWith) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasAssociatedWith) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasAssociatedWith) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasAttributedTo) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasAttributedTo) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasAttributedTo) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasAttributedTo) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasAttributedTo) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasAttributedTo) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasDerivedFrom) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasDerivedFrom) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasDerivedFrom) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasDerivedFrom) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasDerivedFrom) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasDerivedFrom) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasEndedBy) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasEndedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasEndedBy) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasEndedBy) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasEndedBy) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasEndedBy) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasGeneratedBy) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasGeneratedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasGeneratedBy) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasGeneratedBy) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasGeneratedBy) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasGeneratedBy) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasInfluencedBy) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasInfluencedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasInfluencedBy) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasInfluencedBy) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasInfluencedBy) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasInfluencedBy) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasInformedBy) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasInformedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasInformedBy) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasInformedBy) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasInformedBy) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasInformedBy) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasInvalidatedBy) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasInvalidatedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasInvalidatedBy) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasInvalidatedBy) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasInvalidatedBy) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasInvalidatedBy) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
doAction(WasStartedBy) - Method in class org.openprovenance.prov.model.BeanTraversal
 
doAction(WasStartedBy) - Method in class org.openprovenance.prov.model.IndexedDocument
 
doAction(WasStartedBy) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
doAction(WasStartedBy) - Method in class org.openprovenance.prov.model.ProvFactory.Cloner
 
doAction(WasStartedBy) - Method in interface org.openprovenance.prov.model.StatementAction
 
doAction(WasStartedBy) - Method in interface org.openprovenance.prov.model.StatementActionValue
 
Document - Class in org.openprovenance.prov.vanilla
 
Document - Interface in org.openprovenance.prov.model
Interface for a PROV Document.
Document() - Constructor for class org.openprovenance.prov.vanilla.Document
 
Document(List<StatementOrBundle>) - Constructor for class org.openprovenance.prov.vanilla.Document
 
Document(Namespace, Collection<Statement>, Collection<Bundle>) - Constructor for class org.openprovenance.prov.vanilla.Document
 
Document(Namespace, List<StatementOrBundle>) - Constructor for class org.openprovenance.prov.vanilla.Document
 
DocumentedUnsupportedCaseException - Exception in org.openprovenance.prov.model.exception
An exception thrown when a documented unsupported case is called
DocumentedUnsupportedCaseException() - Constructor for exception org.openprovenance.prov.model.exception.DocumentedUnsupportedCaseException
 
DocumentedUnsupportedCaseException(String) - Constructor for exception org.openprovenance.prov.model.exception.DocumentedUnsupportedCaseException
 
DocumentedUnsupportedCaseException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.DocumentedUnsupportedCaseException
 
DocumentedUnsupportedCaseException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.DocumentedUnsupportedCaseException
 
DocumentEquality - Class in org.openprovenance.prov.model
 
DocumentEquality() - Constructor for class org.openprovenance.prov.model.DocumentEquality
 
DocumentEquality(boolean, PrintStream) - Constructor for class org.openprovenance.prov.model.DocumentEquality
 
DOMProcessing - Class in org.openprovenance.prov.model
Utility class for processing DOM Element, in particular conversion from a PROV attribute to an Element and vice-versa.
DOMProcessing(ProvFactory) - Constructor for class org.openprovenance.prov.model.DOMProcessing
 
DOT - org.openprovenance.prov.interop.Formats.ProvFormat
 
DOT_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
DOT_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
DOUBLE_MINUS_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Double constant for minus one.
DOUBLE_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Double constant for one.
DOUBLE_ZERO - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Double constant for zero.
doubleQuoteMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns a matcher which matches the double quote character.

E

Element - Interface in org.openprovenance.prov.model
Interface for an Entity, an Activity, or an Agent.
EMPTY - Static variable in class org.openprovenance.apache.commons.lang.CharSet
A CharSet defining no characters.
EMPTY - Static variable in class org.openprovenance.apache.commons.lang.StringUtils
The empty String "".
EMPTY_BOOLEAN_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable boolean array.
EMPTY_BOOLEAN_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Boolean array.
EMPTY_BYTE_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable byte array.
EMPTY_BYTE_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Byte array.
EMPTY_CHAR_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable char array.
EMPTY_CHARACTER_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Character array.
EMPTY_CLASS_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Class array.
EMPTY_DOUBLE_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable double array.
EMPTY_DOUBLE_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Double array.
EMPTY_FLOAT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable float array.
EMPTY_FLOAT_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Float array.
EMPTY_INT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable int array.
EMPTY_INTEGER_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Integer array.
EMPTY_LONG_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable long array.
EMPTY_LONG_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Long array.
EMPTY_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Object array.
EMPTY_SHORT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable short array.
EMPTY_SHORT_OBJECT_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable Short array.
EMPTY_STRING_ARRAY - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
An empty immutable String array.
ender - Variable in class org.openprovenance.prov.vanilla.WasEndedBy
 
endsWith(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks whether this builder ends with the specified string.
endsWith(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Check if a String ends with a specified suffix.
endsWithAny(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Check if a String ends with any of an array of specified strings.
endsWithIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case insensitive check if a String ends with a specified suffix.
ensureCapacity(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks the capacity and ensures that it is at least the size specified.
entity - Variable in class org.openprovenance.prov.vanilla.HadMember
 
entity - Variable in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
entity - Variable in class org.openprovenance.prov.vanilla.Used
 
entity - Variable in class org.openprovenance.prov.vanilla.WasAttributedTo
 
entity - Variable in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
entity - Variable in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
Entity - Class in org.openprovenance.prov.vanilla
 
Entity - Interface in org.openprovenance.prov.model
Interface for the PROV Entity complex type.
Entity(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.Entity
 
Entry - Interface in org.openprovenance.prov.model
Interface for Key-Entity entry in a PROV Dictionary.
equals(Object) - Method in class org.openprovenance.apache.commons.lang.CharRange
Compares two CharRange objects, returning true if they represent exactly the same range of characters defined in the same way.
equals(Object) - Method in class org.openprovenance.apache.commons.lang.CharSet
Compares two CharSet objects, returning true if they represent exactly the same set of characters defined in the same way.
equals(Object) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks the contents of this builder against another to see if they contain the same character content.
equals(Object) - Method in interface org.openprovenance.prov.model.QualifiedName
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Activity
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Agent
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Bundle
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Document
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Entity
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.HadMember
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.LangString
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Other
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.Used
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
equals(Object) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
equals(Object, Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Compares two objects for equality, where either one or both objects may be null.
equals(Object, EqualsBuilder) - Method in interface org.openprovenance.apache.commons.lang.builder.Equals
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Activity
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Agent
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Bundle
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Document
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Entity
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.HadMember
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.LangString
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Other
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.Used
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
equals(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
equals(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Compares two Strings, returning true if they are equal.
equals(StrBuilder) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks the contents of this builder against another to see if they contain the same character content.
Equals - Interface in org.openprovenance.apache.commons.lang.builder
 
equals2(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
equals2(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.HadMember
 
equals2(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
equals2(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
equals2(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
equals2(Object, EqualsBuilder) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
EqualsBuilder - Class in org.openprovenance.apache.commons.lang.builder
Assists in implementing Object.equals(Object) methods.
EqualsBuilder() - Constructor for class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Constructor for EqualsBuilder.
equalsIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Compares two Strings, returning true if they are equal ignoring the case.
equalsIgnoreCase(StrBuilder) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks the contents of this builder against another to see if they contain the same character content ignoring case.
escape(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringEscapeUtils.escapeJava(String) This method will be removed in Commons Lang 3.0
escape(String) - Static method in class org.openprovenance.prov.model.ProvUtilities
 
ESCAPE_PROV_LOCAL_NAME - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
ESCAPE_TO_XML_QNAME_LOCAL_NAME - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
ESCAPE_UNICODE - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
escapeCsv(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Writes a String value for a CSV column enclosed in double quotes, if required.
escapeCsv(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Returns a String value for a CSV column enclosed in double quotes, if required.
escapeHtml(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using HTML entities and writes them to a Writer.
escapeHtml(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using HTML entities.
escapeJava(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using Java String rules to a Writer.
escapeJava(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using Java String rules.
escapeJavaScript(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using JavaScript String rules to a Writer.
escapeJavaScript(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using JavaScript String rules.
escapeProvLocalName(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
escapeSql(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String to be suitable to pass to an SQL query.
escapeToXsdLocalName(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
escapeUnicode(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
escapeXml(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using XML entities.
escapeXml(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Escapes the characters in a String using XML entities.
evaluateSet(String[]) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Deprecated.
Use CharSet.getInstance(String[]). Method will be removed in Commons Lang 3.0.
ExceptionUtils - Class in org.openprovenance.apache.commons.lang.exception
Provides utilities for manipulating and examining Throwable objects.
ExceptionUtils() - Constructor for class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Public constructor allows an instance of ExceptionUtils to be created, although that is not normally necessary.
extendWith(Namespace) - Method in class org.openprovenance.prov.model.Namespace
Extends this Namespace with all the prefix/namespace registration of the Namespace received as argument.
EXTENSION_DOT - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The recommended extension for DOT files (Graphviz).
EXTENSION_JPEG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
EXTENSION_JPG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
EXTENSION_JSON - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
EXTENSION_JSONLD - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
EXTENSION_PDF - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
EXTENSION_PNG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
EXTENSION_PROVN - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The recommended extension for PROV-N files.
EXTENSION_PROVX - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The recommended extension for PROV-XML files.
EXTENSION_RDF - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The recommended extension for RDF/XML files.
EXTENSION_SVG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The extension for SCG files (Note, where is this recommended?).
EXTENSION_TRIG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The recommended extension for TRIG files.
EXTENSION_TTL - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The recommended extension for Turtle files.
EXTENSION_XML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The extension for XML files.

F

FILE_ENCODING - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The file.encoding System Property.
FILE_SEPARATOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The file.separator System Property.
FLOAT_MINUS_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Float constant for minus one.
FLOAT_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Float constant for one.
FLOAT_ZERO - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Float constant for zero.
forAllStatement(List<Statement>, StatementAction) - Method in class org.openprovenance.prov.model.ProvUtilities
 
forAllStatementOrBundle(List<StatementOrBundle>, StatementAction) - Method in class org.openprovenance.prov.model.ProvUtilities
 
Formats - Class in org.openprovenance.prov.interop
 
Formats() - Constructor for class org.openprovenance.prov.interop.Formats
 
Formats.ProvFormat - Enum in org.openprovenance.prov.interop
An enumerated type for all the PROV serializations supported by ProvToolbox.
Formats.ProvFormatType - Enum in org.openprovenance.prov.interop
 

G

gatherNamespaces(Bundle) - Static method in class org.openprovenance.prov.model.Namespace
 
gatherNamespaces(Bundle, ProvFactory) - Static method in class org.openprovenance.prov.model.Namespace
 
gatherNamespaces(Document) - Static method in class org.openprovenance.prov.model.Namespace
 
generalEntity - Variable in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
generalEntity - Variable in class org.openprovenance.prov.vanilla.SpecializationOf
 
generatedEntity - Variable in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
generation - Variable in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getAccessibleMethod(Class, String, Class) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Return an accessible method (that is, one that can be invoked via reflection) with given name and a single parameter.
getAccessibleMethod(Class, String, Class[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Return an accessible method (that is, one that can be invoked via reflection) with given name and parameters.
getAccessibleMethod(Method) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Return an accessible method (that is, one that can be invoked via reflection) that implements the specified Method.
getActivity() - Method in interface org.openprovenance.prov.model.ActedOnBehalfOf
Get the activity identifier.
getActivity() - Method in interface org.openprovenance.prov.model.Used
 
getActivity() - Method in interface org.openprovenance.prov.model.WasAssociatedWith
 
getActivity() - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
getActivity() - Method in interface org.openprovenance.prov.model.WasEndedBy
 
getActivity() - Method in interface org.openprovenance.prov.model.WasGeneratedBy
 
getActivity() - Method in interface org.openprovenance.prov.model.WasInvalidatedBy
 
getActivity() - Method in interface org.openprovenance.prov.model.WasStartedBy
 
getActivity() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getActivity() - Method in class org.openprovenance.prov.vanilla.Used
 
getActivity() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getActivity() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getActivity() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getActivity() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getActivity() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getActivity() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getActivity(Bundle) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getActivity(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getActivity(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
getAgent() - Method in interface org.openprovenance.prov.model.WasAssociatedWith
 
getAgent() - Method in interface org.openprovenance.prov.model.WasAttributedTo
Get the identifier of the agent whom the entity is ascribed to, and therefore bears some responsibility for its existence
getAgent() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getAgent() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getAgent(Bundle) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getAgent(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getAgent(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
getAllInterfaces(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets a List of all interfaces implemented by the given class and its superclasses.
getAllSuperclasses(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets a List of superclasses for the given class.
getAlternate1() - Method in interface org.openprovenance.prov.model.AlternateOf
Returns the identifier for the first of the two entities.
getAlternate1() - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
getAlternate1() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getAlternate2() - Method in interface org.openprovenance.prov.model.AlternateOf
Returns the identifier for the second of the two entities.
getAlternate2() - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
getAlternate2() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getArrayEnd() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the array end text.
getArraySeparator() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the array separator text.
getArrayStart() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the array start text.
getAttributeKind(QualifiedName) - Method in interface org.openprovenance.prov.model.Attribute
 
getAttributeKind(QualifiedName) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.Activity
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.Agent
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.Entity
 
getAttributes() - Method in interface org.openprovenance.prov.vanilla.HasAttributes
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.Used
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getAttributes() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getAttributes(Statement) - Method in class org.openprovenance.prov.model.ProvFactory
 
getBundle() - Method in interface org.openprovenance.prov.model.MentionOf
Get an identifier of a bundle that contains a description of "general entity" and further constitutes one additional aspect presented by "specific entity".
getBundle(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getCause() - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the reference to the exception or error that caused the exception implementing the Nestable to be thrown.
getCause() - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the reference to the exception or error that caused the exception implementing the Nestable to be thrown.
getCause(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Introspects the Throwable to obtain the cause.
getCause(Throwable, String[]) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Introspects the Throwable to obtain the cause.
getCause(Relation) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getCharRanges() - Method in class org.openprovenance.apache.commons.lang.CharSet
Gets the internal set as an array of CharRange objects.
getChars(char[]) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Copies the character array into the specified array.
getChars(int, int, char[], int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Copies the character array into the specified array.
getChomp(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.substringAfterLast(String, String) instead (although this doesn't include the separator) Method will be removed in Commons Lang 3.0.
getClass(ClassLoader, String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Returns the (initialized) class represented by className using the classLoader.
getClass(ClassLoader, String, boolean) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Returns the class represented by className using the classLoader.
getClass(String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Returns the (initialized) class represented by className using the current thread's context class loader.
getClass(String, boolean) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Returns the class represented by className using the current thread's context class loader.
getCollection() - Method in interface org.openprovenance.prov.model.HadMember
Get an identifier for the collection whose member is asserted
getCollection() - Method in class org.openprovenance.prov.vanilla.HadMember
Get an identifier for the collection whose member is asserted
getCollection() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getCommonPrefix(String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Compares all Strings in an array and returns the initial sequence of characters that is common to all of them.
getContent() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the String content that the tokenizer is parsing.
getContentEnd() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the content end text.
getContentStart() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the content start text.
getConvertedValue() - Method in interface org.openprovenance.prov.model.Attribute
Returns the value of an Attribute as a Java Object.
getConvertedValue() - Method in interface org.openprovenance.prov.model.TypedValue
Returns the cached converted value for the value property .
getConvertedValue() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getCSVInstance() - Static method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a new tokenizer instance which parses Comma Separated Value strings initializing it with the given input.
getCSVInstance(char[]) - Static method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a new tokenizer instance which parses Comma Separated Value strings initializing it with the given input.
getCSVInstance(String) - Static method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a new tokenizer instance which parses Comma Separated Value strings initializing it with the given input.
getDefaultNamespace() - Method in class org.openprovenance.prov.model.Namespace
 
getDefaultStyle() - Static method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Gets the default ToStringStyle to use.
getDelegate() - Method in interface org.openprovenance.prov.model.ActedOnBehalfOf
Get the delegate identifier.
getDelegate() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getDelimiterMatcher() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the field delimiter matcher.
getDictionary() - Method in interface org.openprovenance.prov.model.DictionaryMembership
Get an identifier for the dictionary whose members are asserted.
getEffect(Relation) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getElementName() - Method in interface org.openprovenance.prov.model.Attribute
 
getElementName() - Method in interface org.openprovenance.prov.model.Other
Get the element name
getElementName() - Method in class org.openprovenance.prov.vanilla.Label
 
getElementName() - Method in class org.openprovenance.prov.vanilla.Location
 
getElementName() - Method in class org.openprovenance.prov.vanilla.Other
 
getElementName() - Method in class org.openprovenance.prov.vanilla.Role
 
getElementName() - Method in class org.openprovenance.prov.vanilla.Type
 
getElementName() - Method in class org.openprovenance.prov.vanilla.Value
 
getEnd() - Method in class org.openprovenance.apache.commons.lang.CharRange
Gets the end character for this character range.
getEnder() - Method in interface org.openprovenance.prov.model.WasEndedBy
 
getEnder() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getEndTime() - Method in interface org.openprovenance.prov.model.Activity
Gets the value of the endTime property.
getEndTime() - Method in class org.openprovenance.prov.vanilla.Activity
 
getEntity() - Method in interface org.openprovenance.prov.model.Entry
 
getEntity() - Method in interface org.openprovenance.prov.model.HadMember
Get the list of identifiers of entities that are member of the collection.
getEntity() - Method in interface org.openprovenance.prov.model.Used
 
getEntity() - Method in interface org.openprovenance.prov.model.WasAttributedTo
Gets the entity identifier.
getEntity() - Method in interface org.openprovenance.prov.model.WasGeneratedBy
 
getEntity() - Method in interface org.openprovenance.prov.model.WasInvalidatedBy
 
getEntity() - Method in class org.openprovenance.prov.vanilla.HadMember
Get the list of identifiers of entities that are member of the collection.
getEntity() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getEntity() - Method in class org.openprovenance.prov.vanilla.Used
 
getEntity() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getEntity() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getEntity() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getEntity(Bundle) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getEntity(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getEntity(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
getExcludeFieldNames() - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
 
getFactory() - Static method in class org.openprovenance.prov.vanilla.ProvFactory
 
getFieldNameValueSeparator() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the field name value separator text.
getFieldSeparator() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the field separator text.
getFullStackTrace(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
A way to get the entire nested stack-trace of an throwable.
getGeneralEntity() - Method in interface org.openprovenance.prov.model.MentionOf
Get an identifier for an entity that is described in the bundle.
getGeneralEntity() - Method in interface org.openprovenance.prov.model.SpecializationOf
Returns an identifier of the entity that is being specialized.
getGeneralEntity() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getGeneralEntity() - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
getGeneratedEntity() - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
getGeneratedEntity() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getGeneration() - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
getGeneration() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getId() - Method in interface org.openprovenance.prov.model.Identifiable
Gets the value of the id property.
getId() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getId() - Method in class org.openprovenance.prov.vanilla.Activity
 
getId() - Method in class org.openprovenance.prov.vanilla.Agent
 
getId() - Method in class org.openprovenance.prov.vanilla.Bundle
Gets the value of the id property.
getId() - Method in class org.openprovenance.prov.vanilla.Entity
 
getId() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getId() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getId() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getId() - Method in class org.openprovenance.prov.vanilla.Used
 
getId() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getId() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getId() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getId() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getId() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getId() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getId() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getId() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getId() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getIgnoredMatcher() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the ignored character matcher.
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.Activity
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.Agent
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.Entity
 
getIndexedAttributes() - Method in interface org.openprovenance.prov.vanilla.HasAttributes
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.Used
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getIndexedAttributes() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getInfluencee() - Method in interface org.openprovenance.prov.model.WasInfluencedBy
 
getInfluencee() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getInfluencer() - Method in interface org.openprovenance.prov.model.WasInfluencedBy
 
getInfluencer() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getInformant() - Method in interface org.openprovenance.prov.model.WasInformedBy
 
getInformant() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getInformed() - Method in interface org.openprovenance.prov.model.WasInformedBy
 
getInformed() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getInstance(String) - Static method in class org.openprovenance.apache.commons.lang.CharSet
Factory method to create a new CharSet using a special syntax.
getInstance(String[]) - Static method in class org.openprovenance.apache.commons.lang.CharSet
Constructs a new CharSet using the set syntax.
getJavaHome() - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the Java home directory as a File.
getJavaIoTmpDir() - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the Java IO temporary directory as a File.
getJavaVersion() - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Deprecated.
Use SystemUtils.JAVA_VERSION_FLOAT instead. Method will be removed in Commons Lang 3.0.
getKey() - Method in interface org.openprovenance.prov.model.DerivedByRemovalFrom
Get the set of deleted keys.
getKey() - Method in interface org.openprovenance.prov.model.Entry
 
getKeyEntityPair() - Method in interface org.openprovenance.prov.model.DerivedByInsertionFrom
 
getKeyEntityPair() - Method in interface org.openprovenance.prov.model.DictionaryMembership
A list of entries (key-entity pairs) that are members of the dictionary.
getKind() - Method in interface org.openprovenance.prov.model.Attribute
 
getKind() - Method in interface org.openprovenance.prov.model.StatementOrBundle
Gets the type of a provenance statement
getKind() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getKind() - Method in class org.openprovenance.prov.vanilla.Activity
 
getKind() - Method in class org.openprovenance.prov.vanilla.Agent
 
getKind() - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
getKind() - Method in class org.openprovenance.prov.vanilla.Bundle
Gets the type of a provenance statement
getKind() - Method in class org.openprovenance.prov.vanilla.Entity
 
getKind() - Method in class org.openprovenance.prov.vanilla.HadMember
Gets the type of a provenance statement
getKind() - Method in class org.openprovenance.prov.vanilla.Label
 
getKind() - Method in class org.openprovenance.prov.vanilla.Location
 
getKind() - Method in class org.openprovenance.prov.vanilla.Other
 
getKind() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getKind() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getKind() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getKind() - Method in class org.openprovenance.prov.vanilla.Role
 
getKind() - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
getKind() - Method in class org.openprovenance.prov.vanilla.Type
 
getKind() - Method in class org.openprovenance.prov.vanilla.Used
 
getKind() - Method in class org.openprovenance.prov.vanilla.Value
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getKind() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getLabel() - Method in interface org.openprovenance.prov.model.HasLabel
Gets the value of the label property.
getLabel() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getLabel() - Method in class org.openprovenance.prov.vanilla.Activity
 
getLabel() - Method in class org.openprovenance.prov.vanilla.Agent
 
getLabel() - Method in class org.openprovenance.prov.vanilla.Entity
 
getLabel() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getLabel() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getLabel() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getLabel() - Method in class org.openprovenance.prov.vanilla.Used
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getLabel() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getLabel(HasLabel) - Method in class org.openprovenance.prov.model.ProvFactory
 
getLang() - Method in interface org.openprovenance.prov.model.LangString
Gets the value of the lang property.
getLang() - Method in class org.openprovenance.prov.vanilla.LangString
 
getLanguageString() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getLength(Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Returns the length of the specified array.
getLevenshteinDistance(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Find the Levenshtein distance between two Strings.
getLocalPart() - Method in interface org.openprovenance.prov.model.QualifiedName
Get the local part of this QualifiedName.
getLocalPart() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
getLocation() - Method in interface org.openprovenance.prov.model.HasLocation
Gets the value of the location property.
getLocation() - Method in class org.openprovenance.prov.vanilla.Activity
 
getLocation() - Method in class org.openprovenance.prov.vanilla.Agent
 
getLocation() - Method in class org.openprovenance.prov.vanilla.Entity
 
getLocation() - Method in class org.openprovenance.prov.vanilla.Used
 
getLocation() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getLocation() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getLocation() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getLocation() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getMatchingAccessibleMethod(Class, String, Class[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Find an accessible method that matches the given name and has compatible parameters.
getMessage() - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the error message of this and any nested Throwable.
getMessage() - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the detail message string of this throwable.
getMessage(int) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the error message of the Throwable in the chain of Throwables at the specified index, numbered from 0.
getMessage(int) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns the error message of the Throwable in the chain of Throwables at the specified index, numbered from 0.
getMessage(int) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the error message of the Throwable in the chain of Throwables at the specified index, numbered from 0.
getMessage(String) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns the full message contained by the Nestable and any nested Throwables.
getMessage(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Gets a short message summarising the exception.
getMessages() - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the error message of this and any nested Throwables in an array of Strings, one element for each message.
getMessages() - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns the error message of this and any nested Throwables in an array of Strings, one element for each message.
getMessages() - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the error message of this and any nested Throwables in an array of Strings, one element for each message.
getName() - Method in class org.openprovenance.prov.model.ProvFactory
 
getNamedBundle(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getNamespace() - Method in interface org.openprovenance.prov.model.Bundle
 
getNamespace() - Method in interface org.openprovenance.prov.model.Document
Accessor for the Namespace object containing registered prefix/namespaces for the current document.#
getNamespace() - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
getNamespace() - Method in class org.openprovenance.prov.vanilla.Bundle
 
getNamespace() - Method in class org.openprovenance.prov.vanilla.Document
 
getNamespaces() - Method in class org.openprovenance.prov.model.Namespace
 
getNamespaceURI() - Method in interface org.openprovenance.prov.model.QualifiedName
Get the Namespace URI of this QualifiedName.
getNamespaceURI() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
getNestedString(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the better named StringUtils.substringBetween(String, String). Method will be removed in Commons Lang 3.0.
getNestedString(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the better named StringUtils.substringBetween(String, String, String). Method will be removed in Commons Lang 3.0.
getNewDictionary() - Method in interface org.openprovenance.prov.model.DerivedByInsertionFrom
 
getNewDictionary() - Method in interface org.openprovenance.prov.model.DerivedByRemovalFrom
Get an identifier for the dictionary after the deletion
getNewLineText() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the text to be appended when a new line is added.
getNullText() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the text to output when null found.
getNullText() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the text to be appended when null is added.
getObject() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Returns the Object being output.
getObject(Class<T>, List<StatementOrBundle>) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getObject2(Class<T>, List<Statement>) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getObjectFactory() - Method in class org.openprovenance.prov.model.ProvFactory
 
getOldDictionary() - Method in interface org.openprovenance.prov.model.DerivedByInsertionFrom
 
getOldDictionary() - Method in interface org.openprovenance.prov.model.DerivedByRemovalFrom
Get an identifier for the dictionary before the deletion
getOther() - Method in interface org.openprovenance.prov.model.HasOther
Gets the list of non-PROV attributes.
getOther() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getOther() - Method in class org.openprovenance.prov.vanilla.Activity
 
getOther() - Method in class org.openprovenance.prov.vanilla.Agent
 
getOther() - Method in class org.openprovenance.prov.vanilla.Entity
 
getOther() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getOther() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getOther() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getOther() - Method in class org.openprovenance.prov.vanilla.Used
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getOther() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getOtherCauses(Relation) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getPackageCanonicalName(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the package name from the canonical name of a Class.
getPackageCanonicalName(Object, String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the package name from the canonical name of an Object.
getPackageCanonicalName(String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the package name from the canonical name.
getPackageList() - Method in class org.openprovenance.prov.model.ProvFactory
 
getPackageName(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the package name of a Class.
getPackageName(Object, String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the package name of an Object.
getPackageName(String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the package name from a String.
getParent() - Method in class org.openprovenance.prov.model.Namespace
 
getPlan() - Method in interface org.openprovenance.prov.model.WasAssociatedWith
 
getPlan() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getPrechomp(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.substringBefore(String,String) instead (although this doesn't include the separator). Method will be removed in Commons Lang 3.0.
getPreDeclaredNamespaceUris() - Method in interface org.openprovenance.prov.model.NamespacePrefixMapper
Returns a list of namespace URIs that should be declared at the root element.
getPreferredPrefix(String, String, boolean) - Method in interface org.openprovenance.prov.model.NamespacePrefixMapper
Returns a preferred prefix for the given namespace URI.
getPrefix() - Method in interface org.openprovenance.prov.model.QualifiedName
Get the prefix of this Qualified Name.
getPrefix() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
getPrefixes() - Method in class org.openprovenance.prov.model.Namespace
 
getPropertiesFromClasspath(Class<?>, String) - Static method in class org.openprovenance.prov.configuration.Configuration
 
getPropertiesFromClasspath(String) - Static method in class org.openprovenance.prov.configuration.Configuration
 
getPublicMethod(Class, String, Class[]) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Returns the desired Method much like Class.getMethod, however it ensures that the returned Method is from a public class or interface and not from an anonymous inner class.
getQualifiedName(Attribute.AttributeKind) - Method in interface org.openprovenance.prov.model.Attribute
 
getQualifiedName(Attribute.AttributeKind) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getQuoteMatcher() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the quote matcher currently in use.
getRelations(Bundle) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getRelations(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getResponsible() - Method in interface org.openprovenance.prov.model.ActedOnBehalfOf
Get the responsible identifier.
getResponsible() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getRole() - Method in interface org.openprovenance.prov.model.HasRole
Gets the value of the role property.
getRole() - Method in class org.openprovenance.prov.vanilla.Used
Gets the value of the role property.
getRole() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
Gets the value of the role property.
getRole() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
Gets the value of the role property.
getRole() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
Gets the value of the role property.
getRole() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
Gets the value of the role property.
getRole() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
Gets the value of the role property.
getRole(HasOther) - Method in class org.openprovenance.prov.model.ProvFactory
 
getRootCause(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Introspects the Throwable to obtain the root cause.
getRootCauseMessage(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Gets a short message summarising the root cause exception.
getRootCauseStackTrace(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Creates a compact stack trace for the root cause of the supplied Throwable.
getSerializer() - Method in class org.openprovenance.prov.model.ProvFactory
 
getSerializer() - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
getShortCanonicalName(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the canonical name minus the package name from a Class.
getShortCanonicalName(Object, String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the canonical name minus the package name for an Object.
getShortCanonicalName(String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the canonical name minus the package name from a String.
getShortClassName(Class) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the short class name for a class.
getShortClassName(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the class name minus the package name from a Class.
getShortClassName(Object, String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the class name minus the package name for an Object.
getShortClassName(String) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Gets the class name minus the package name from a String.
getSizeEndText() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the end text to output when a Collection, Map or array size is output.
getSizeStartText() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the start text to output when a Collection, Map or array size is output.
getSpecificEntity() - Method in interface org.openprovenance.prov.model.MentionOf
Get an identifier of the entity that is a mention of the general entity.
getSpecificEntity() - Method in interface org.openprovenance.prov.model.SpecializationOf
Returns an identifier of the entity that is a specialization of the general entity.
getSpecificEntity() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getSpecificEntity() - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
getStackFrames(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Captures the stack trace associated with the specified Throwable object, decomposing it into a list of stack frames.
getStackFrames(Throwable) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Captures the stack trace associated with the specified Throwable object, decomposing it into a list of stack frames.
getStackTrace(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Gets the stack trace from a Throwable as a String.
getStart() - Method in class org.openprovenance.apache.commons.lang.CharRange
Gets the start character for this character range.
getStarter() - Method in interface org.openprovenance.prov.model.WasStartedBy
 
getStarter() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getStartTime() - Method in interface org.openprovenance.prov.model.Activity
Gets the value of the startTime property.
getStartTime() - Method in class org.openprovenance.prov.vanilla.Activity
 
getStatement() - Method in interface org.openprovenance.prov.model.Bundle
 
getStatement() - Method in class org.openprovenance.prov.vanilla.Bundle
 
getStatement(Bundle) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getStatement(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getStatementOrBundle() - Method in interface org.openprovenance.prov.model.Document
Gets the value of the statementOrBundle property.
getStatementOrBundle() - Method in class org.openprovenance.prov.vanilla.Document
 
getStringBuffer() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Gets the StringBuffer being populated.
getStyle() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Gets the ToStringStyle being used.
getSummaryObjectEndText() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the end text to output when an Object is output in summary mode.
getSummaryObjectStartText() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets the start text to output when an Object is output in summary mode.
getter(Statement, int) - Method in class org.openprovenance.prov.model.ProvUtilities
 
getThreadNamespace() - Static method in class org.openprovenance.prov.model.Namespace
 
getThrowable(int) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the Throwable in the chain of Throwables at the specified index, numbered from 0.
getThrowable(int) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns the Throwable in the chain of Throwables at the specified index, numbered from 0.
getThrowable(int) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the Throwable in the chain of Throwables at the specified index, numbered from 0.
getThrowableCount() - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the number of nested Throwables represented by this Nestable, including this Nestable.
getThrowableCount() - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns the number of Throwables contained in the Nestable contained by this delegate.
getThrowableCount() - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the number of nested Throwables represented by this Nestable, including this Nestable.
getThrowableCount(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Counts the number of Throwable objects in the exception chain.
getThrowableList(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Returns the list of Throwable objects in the exception chain.
getThrowables() - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns this Nestable and any nested Throwables in an array of Throwables, one element for each Throwable.
getThrowables() - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns this delegate's Nestable and any nested Throwables in an array of Throwables, one element for each Throwable.
getThrowables() - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns this Nestable and any nested Throwables in an array of Throwables, one element for each Throwable.
getThrowables(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Returns the list of Throwable objects in the exception chain.
getTime() - Method in interface org.openprovenance.prov.model.HasTime
Get time instant
getTime() - Method in class org.openprovenance.prov.vanilla.Used
Get time instant
getTime() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
Get time instant
getTime() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
Get time instant
getTime() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
Get time instant
getTime() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
Get time instant
getTokenArray() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a copy of the full token list as an independent modifiable array.
getTokenList() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a copy of the full token list as an independent modifiable list.
getTrigger() - Method in interface org.openprovenance.prov.model.WasEndedBy
 
getTrigger() - Method in interface org.openprovenance.prov.model.WasStartedBy
 
getTrigger() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getTrigger() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getTrimmerMatcher() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the trimmer character matcher.
getTSVInstance() - Static method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a new tokenizer instance which parses Tab Separated Value strings.
getTSVInstance(char[]) - Static method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a new tokenizer instance which parses Tab Separated Value strings.
getTSVInstance(String) - Static method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets a new tokenizer instance which parses Tab Separated Value strings.
getType() - Method in interface org.openprovenance.prov.model.Attribute
Get the type of an Attribute
getType() - Method in interface org.openprovenance.prov.model.HasType
Gets the value of the prov:type property.
getType() - Method in interface org.openprovenance.prov.model.TypedValue
Gets the type, expressed as a QualifiedName
getType() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
getType() - Method in class org.openprovenance.prov.vanilla.Activity
 
getType() - Method in class org.openprovenance.prov.vanilla.Agent
 
getType() - Method in class org.openprovenance.prov.vanilla.Entity
 
getType() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
getType() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
getType() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
getType() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getType() - Method in class org.openprovenance.prov.vanilla.Used
 
getType() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
getType() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
getType() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getType() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
getType() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
getType() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
getType() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
getType() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
getType() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
getType(HasOther) - Method in class org.openprovenance.prov.model.ProvFactory
 
getTypeString() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getUpToClass() - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Gets the last super class to stop appending fields for.
getUri() - Method in interface org.openprovenance.prov.model.QualifiedName
 
getUri() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
getUsage() - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
getUsage() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getUsed() - Method in class org.openprovenance.prov.model.IndexedDocument
Return all used edges for this graph.
getUsed(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all used edges with activity p as an effect.
getUsed(Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all used edges with entity a as a cause.
getUsedEntity() - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
getUsedEntity() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
getUserDir() - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the user directory as a File.
getUserHome() - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the user home directory as a File.
getValue() - Method in interface org.openprovenance.prov.model.Attribute
Get the type of an Attribute
getValue() - Method in interface org.openprovenance.prov.model.HasValue
 
getValue() - Method in interface org.openprovenance.prov.model.LangString
Gets the value of the value property.
getValue() - Method in interface org.openprovenance.prov.model.TypedValue
Gets the value of the value property.
getValue() - Method in class org.openprovenance.prov.vanilla.Entity
 
getValue() - Method in class org.openprovenance.prov.vanilla.LangString
 
getValue() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
getValue(Field) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Calls java.lang.reflect.Field.get(Object).
getVersion() - Method in class org.openprovenance.prov.model.ProvFactory
 
getWasAssociatedWith() - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasAssociatedWith edges for this graph.
getWasAssociatedWith(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasAssociatedWith edges with activity p as an effect.
getWasAssociatedWith(Agent) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasAssociatedWith edges with entity a as a cause.
getWasDerivedFrom() - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasDerivedFrom edges for this graph.
getWasDerivedFromWithCause(Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasDerivedFrom edges with entity a as a cause.
getWasDerivedFromWithEffect(Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasDerivedFrom edges with entity a as an effect.
getWasGeneratedBy() - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasGeneratedBy edges for this graph.
getWasGeneratedBy(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasGeneratedBy edges with activity p as an effect.
getWasGeneratedBy(Entity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasGeneratedBy edges with entity a as a cause.
getWasInformedBy() - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasInformedBy edges for this graph.
getWasInformedByWithCause(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasInformedBy edges with activity p as a cause.
getWasInformedByWithEffect(Activity) - Method in class org.openprovenance.prov.model.IndexedDocument
Return all WasInformedBy edges with activity a as an effect.
getXsdType(Object) - Method in class org.openprovenance.prov.model.ValueConverter
 

H

HadMember - Class in org.openprovenance.prov.vanilla
 
HadMember - Interface in org.openprovenance.prov.model
Interface for PROV Collection Membership
HadMember() - Constructor for class org.openprovenance.prov.vanilla.HadMember
 
HadMember(QualifiedName, List<QualifiedName>) - Constructor for class org.openprovenance.prov.vanilla.HadMember
 
HasAttributes - Interface in org.openprovenance.prov.vanilla
 
hashCode() - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
The computed hashCode from toHashCode() is returned due to the likelyhood of bugs in mis-calling toHashCode() and the unlikelyness of it mattering what the hashCode for HashCodeBuilder itself is.
hashCode() - Method in class org.openprovenance.apache.commons.lang.CharRange
Gets a hashCode compatible with the equals method.
hashCode() - Method in class org.openprovenance.apache.commons.lang.CharSet
Gets a hashCode compatible with the equals method.
hashCode() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets a suitable hash code for this builder.
hashCode() - Method in interface org.openprovenance.prov.model.QualifiedName
Generate the hash code for this QualifiedName.
hashCode() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
hashCode() - Method in class org.openprovenance.prov.vanilla.Activity
 
hashCode() - Method in class org.openprovenance.prov.vanilla.Agent
 
hashCode() - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
hashCode() - Method in class org.openprovenance.prov.vanilla.Bundle
 
hashCode() - Method in class org.openprovenance.prov.vanilla.Document
 
hashCode() - Method in class org.openprovenance.prov.vanilla.Entity
 
hashCode() - Method in class org.openprovenance.prov.vanilla.HadMember
 
hashCode() - Method in class org.openprovenance.prov.vanilla.LangString
 
hashCode() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
hashCode() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
hashCode() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
hashCode() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
hashCode() - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
hashCode() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
hashCode() - Method in class org.openprovenance.prov.vanilla.Used
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
hashCode() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
hashCode(Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Get a hashCode for an array handling multi-dimensional arrays correctly.
hashCode(Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Gets the hash code of an object returning zero when the object is null.
hashCode(HashCodeBuilder) - Method in interface org.openprovenance.apache.commons.lang.builder.HashCode
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Activity
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Agent
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Bundle
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Document
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Entity
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.HadMember
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.LangString
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Other
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.Used
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
hashCode(HashCodeBuilder) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
HashCode - Interface in org.openprovenance.apache.commons.lang.builder
 
HashCodeBuilder - Class in org.openprovenance.apache.commons.lang.builder
Assists in implementing Object.hashCode() methods.
HashCodeBuilder() - Constructor for class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Uses two hard coded choices for the constants needed to build a hashCode.
HashCodeBuilder(int, int) - Constructor for class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Two randomly chosen, non-zero, odd numbers must be passed in.
HasLabel - Interface in org.openprovenance.prov.model
Interface for PROV objects that have a role.
HasLocation - Interface in org.openprovenance.prov.model
Interface for PROV objects that have a location.
hasNext() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Checks whether there are any more tokens.
hasNoTime(Statement) - Method in class org.openprovenance.prov.model.ProvUtilities
Indicates whether object has no time field.
HasOther - Interface in org.openprovenance.prov.model
Interface for PROV objects that have non-PROV attributes.
hasPrevious() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Checks whether there are any previous tokens that can be iterated to.
HasRole - Interface in org.openprovenance.prov.model
Interface for PROV objects that have a role.
HasTime - Interface in org.openprovenance.prov.model
Interface for PROV objects that have time.
hasType(QualifiedName, Collection<Attribute>) - Static method in class org.openprovenance.prov.model.ProvUtilities
 
HasType - Interface in org.openprovenance.prov.model
Interface for PROV objects that have a type.
HasValue - Interface in org.openprovenance.prov.model
Interface for PROV objects that have a value.
hexDecoding(String) - Method in interface org.openprovenance.prov.model.LiteralConstructor
 
hexDecoding(String) - Method in class org.openprovenance.prov.model.ProvFactory
 
hexEncoding(byte[]) - Method in class org.openprovenance.prov.model.ProvFactory
 

I

Identifiable - Interface in org.openprovenance.prov.model
Interface for what can be identified in PROV.
identityToString(Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Gets the toString that would be produced by Object if a class did not override toString itself.
identityToString(StringBuffer, Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Appends the toString that would be produced by Object if a class did not override toString itself.
INDEX_NOT_FOUND - Static variable in class org.openprovenance.apache.commons.lang.ArrayUtils
The index value when an element is not found in a list or array: -1.
INDEX_NOT_FOUND - Static variable in class org.openprovenance.apache.commons.lang.StringUtils
Represents a failed index search.
IndexedDocument - Class in org.openprovenance.prov.model
This class provides a set of indexes over information contained in an Document, facilitating its navigation.
IndexedDocument(ProvFactory, Document) - Constructor for class org.openprovenance.prov.model.IndexedDocument
 
IndexedDocument(ProvFactory, Document, boolean) - Constructor for class org.openprovenance.prov.model.IndexedDocument
 
indexOf(boolean[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(boolean[], boolean, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(byte[], byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(byte[], byte, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the first reference to the specified char.
indexOf(char[], char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(char[], char, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(char, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the first reference to the specified char.
indexOf(double[], double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(double[], double, double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value within a given tolerance in the array.
indexOf(double[], double, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(double[], double, int, double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(float[], float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(float[], float, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(int[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(int[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(long[], long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(long[], long, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(short[], short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array.
indexOf(short[], short, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given value in the array starting at the given index.
indexOf(Object[], Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given object in the array.
indexOf(Object[], Object, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the index of the given object in the array starting at the given index.
indexOf(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the first reference to the specified string.
indexOf(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the first index within a String, handling null.
indexOf(String, char, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the first index within a String from a start position, handling null.
indexOf(String, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the first reference to the specified string starting searching from the given index.
indexOf(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the first index within a String, handling null.
indexOf(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the first index within a String, handling null.
indexOf(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder using the matcher to find the first match.
indexOf(StrMatcher, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder using the matcher to find the first match searching from the given index.
indexOfAny(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Search a String to find the first index of any character in the given set of characters.
indexOfAny(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Search a String to find the first index of any character in the given set of characters.
indexOfAny(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Find the first index of any of a set of potential substrings.
indexOfAnyBut(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Search a String to find the first index of any character not in the given set of characters.
indexOfAnyBut(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Search a String to find the first index of any character not in the given set of characters.
indexOfDifference(String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Compares all Strings in an array and returns the index at which the Strings begin to differ.
indexOfDifference(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Compares two Strings, and returns the index at which the Strings begin to differ.
indexOfIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case in-sensitive find of the first index within a String.
indexOfIgnoreCase(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case in-sensitive find of the first index within a String from the specified position.
indexOfThrowable(Class) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the index, numbered from 0, of the first occurrence of the specified type, or a subclass, in the chain of Throwables.
indexOfThrowable(Class) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the index, numbered from 0, of the first occurrence of the specified type, or a subclass, in the chain of Throwables.
indexOfThrowable(Class, int) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Returns the index, numbered from 0, of the first Throwable that matches the specified type, or a subclass, in the chain of Throwables with an index greater than or equal to the specified index.
indexOfThrowable(Class, int) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Returns the index, numbered from 0, of the first Throwable that matches the specified type, or a subclass, in the chain of Throwables with an index greater than or equal to the specified index.
indexOfThrowable(Class, int) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Returns the index, numbered from 0, of the first Throwable that matches the specified type, or a subclass, in the chain of Throwables with an index greater than or equal to the specified index.
indexOfThrowable(Throwable, Class) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Returns the (zero based) index of the first Throwable that matches the specified class (exactly) in the exception chain.
indexOfThrowable(Throwable, Class, int) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Returns the (zero based) index of the first Throwable that matches the specified type in the exception chain from a specified index.
indexOfType(Throwable, Class) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Returns the (zero based) index of the first Throwable that matches the specified class or subclass in the exception chain.
indexOfType(Throwable, Class, int) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Returns the (zero based) index of the first Throwable that matches the specified type in the exception chain from a specified index.
Influence - Interface in org.openprovenance.prov.model
Interface to denote a relation that carries some influence.
influencee - Variable in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
influencer - Variable in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
informant - Variable in class org.openprovenance.prov.vanilla.WasInformedBy
 
informed - Variable in class org.openprovenance.prov.vanilla.WasInformedBy
 
init() - Method in class org.openprovenance.prov.model.ProvFactory
 
initials(String) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Extracts the initial letters from each word in the String.
initials(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Extracts the initial letters from each word in the String.
INNER_CLASS_SEPARATOR - Static variable in class org.openprovenance.apache.commons.lang.ClassUtils
The inner class separator String: "$".
INNER_CLASS_SEPARATOR_CHAR - Static variable in class org.openprovenance.apache.commons.lang.ClassUtils
The inner class separator character: '$' == 36.
INNER_ESCAPE - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
INPUT - org.openprovenance.prov.interop.Formats.ProvFormatType
 
INPUTOUTPUT - org.openprovenance.prov.interop.Formats.ProvFormatType
 
insert(int, boolean) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the value into this builder.
insert(int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the value into this builder.
insert(int, char[]) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the character array into this builder.
insert(int, char[], int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts part of the character array into this builder.
insert(int, double) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the value into this builder.
insert(int, float) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the value into this builder.
insert(int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the value into this builder.
insert(int, long) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the value into this builder.
insert(int, Object) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the string representation of an object into this builder.
insert(int, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Inserts the string into this builder.
INTEGER_MINUS_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Integer constant for minus one.
INTEGER_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Integer constant for one.
INTEGER_ZERO - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Integer constant for zero.
internationalizedStringUri - Static variable in class org.openprovenance.prov.model.ProvUtilities
 
InteropMediaType - Interface in org.openprovenance.prov.interop
Definition of all Media Types and file Extensions supported by ProvToolbox.
InvalidAttributeValueException - Exception in org.openprovenance.prov.model.exception
An Exception when an attribute is given an invalid value.
InvalidAttributeValueException() - Constructor for exception org.openprovenance.prov.model.exception.InvalidAttributeValueException
 
InvalidAttributeValueException(String) - Constructor for exception org.openprovenance.prov.model.exception.InvalidAttributeValueException
 
InvalidAttributeValueException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.InvalidAttributeValueException
 
InvalidAttributeValueException(String, Throwable, boolean, boolean) - Constructor for exception org.openprovenance.prov.model.exception.InvalidAttributeValueException
 
InvalidAttributeValueException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.InvalidAttributeValueException
 
InvalidCaseException - Exception in org.openprovenance.prov.model.exception
An exception thrown when an invalid case occurs.
InvalidCaseException() - Constructor for exception org.openprovenance.prov.model.exception.InvalidCaseException
 
InvalidCaseException(String) - Constructor for exception org.openprovenance.prov.model.exception.InvalidCaseException
 
InvalidCaseException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.InvalidCaseException
 
InvalidCaseException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.InvalidCaseException
 
InvalidIndexException - Exception in org.openprovenance.prov.model.exception
An exception thrown when an invalid case occurs.
InvalidIndexException() - Constructor for exception org.openprovenance.prov.model.exception.InvalidIndexException
 
InvalidIndexException(String) - Constructor for exception org.openprovenance.prov.model.exception.InvalidIndexException
 
InvalidIndexException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.InvalidIndexException
 
InvalidIndexException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.InvalidIndexException
 
invokeExactMethod(Object, String, Object) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a method whose parameter type matches exactly the object type.
invokeExactMethod(Object, String, Object[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a method whose parameter types match exactly the object types.
invokeExactMethod(Object, String, Object[], Class[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a method whose parameter types match exactly the parameter types given.
invokeExactStaticMethod(Class, String, Object) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a static method whose parameter type matches exactly the object type.
invokeExactStaticMethod(Class, String, Object[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a static method whose parameter types match exactly the object types.
invokeExactStaticMethod(Class, String, Object[], Class[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a static method whose parameter types match exactly the parameter types given.
invokeMethod(Object, String, Object) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a named method whose parameter type matches the object type.
invokeMethod(Object, String, Object[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a named method whose parameter type matches the object type.
invokeMethod(Object, String, Object[], Class[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a named method whose parameter type matches the object type.
invokeStaticMethod(Class, String, Object) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a named static method whose parameter type matches the object type.
invokeStaticMethod(Class, String, Object[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a named static method whose parameter type matches the object type.
invokeStaticMethod(Class, String, Object[], Class[]) - Static method in class org.openprovenance.apache.commons.lang.reflect.MethodUtils
Invoke a named static method whose parameter type matches the object type.
is(char) - Static method in class org.openprovenance.apache.commons.lang.CharRange
Constructs a CharRange over a single character.
IS_JAVA_1_1 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.1 (also 1.1.x versions).
IS_JAVA_1_2 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.2 (also 1.2.x versions).
IS_JAVA_1_3 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.3 (also 1.3.x versions).
IS_JAVA_1_4 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.4 (also 1.4.x versions).
IS_JAVA_1_5 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.5 (also 1.5.x versions).
IS_JAVA_1_6 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.6 (also 1.6.x versions).
IS_JAVA_1_7 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Java version 1.7 (also 1.7.x versions).
is_NC_Name(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
IS_OS_AIX - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is AIX.
IS_OS_HP_UX - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is HP-UX.
IS_OS_IRIX - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Irix.
IS_OS_LINUX - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Linux.
IS_OS_MAC - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Mac.
IS_OS_MAC_OSX - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Mac.
IS_OS_OS2 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is OS/2.
IS_OS_SOLARIS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Solaris.
IS_OS_SUN_OS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is SunOS.
IS_OS_UNIX - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is a UNIX like system, as in any of AIX, HP-UX, Irix, Linux, MacOSX, Solaris or SUN OS.
IS_OS_WINDOWS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows.
IS_OS_WINDOWS_2000 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows 2000.
IS_OS_WINDOWS_7 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows 7.
IS_OS_WINDOWS_95 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows 95.
IS_OS_WINDOWS_98 - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows 98.
IS_OS_WINDOWS_ME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows ME.
IS_OS_WINDOWS_NT - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows NT.
IS_OS_WINDOWS_VISTA - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows Vista.
IS_OS_WINDOWS_XP - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Is true if this is Windows XP.
isAllLowerCase(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only lowercase characters.
isAllUpperCase(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only uppercase characters.
isAlpha(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only unicode letters.
isAlphanumeric(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only unicode letters or digits.
isAlphanumericSpace(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only unicode letters, digits or space (' ').
isAlphaSpace(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only unicode letters and space (' ').
isAppendStatics() - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Gets whether or not to append static fields.
isAppendTransients() - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Gets whether or not to append transient fields.
isArrayContentDetail() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether to output array content detail.
isAscii(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit.
isAsciiAlpha(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit alphabetic.
isAsciiAlphaLower(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit alphabetic lower case.
isAsciiAlphanumeric(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit numeric.
isAsciiAlphaUpper(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit alphabetic upper case.
isAsciiControl(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit control.
isAsciiNumeric(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit numeric.
isAsciiPrintable(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Checks whether the character is ASCII 7 bit printable.
isAsciiPrintable(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the string contains only ASCII printable characters.
isAssignable(Class[], Class[]) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Checks if an array of Classes can be assigned to another array of Classes.
isAssignable(Class[], Class[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Checks if an array of Classes can be assigned to another array of Classes.
isAssignable(Class, Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Checks if one Class can be assigned to a variable of another Class.
isAssignable(Class, Class, boolean) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Checks if one Class can be assigned to a variable of another Class.
isBlank(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if a String is whitespace, empty ("") or null.
isCauseMethodName(String) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Tests if the list of method names used in the search for Throwable objects include the given name.
isDefaultFullDetail() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether to use full detail when the caller doesn't specify.
isDigits(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Checks whether the String contains only digit characters.
isEmpty() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks is the string builder is empty (convenience Collections API style method).
isEmpty(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive booleans is empty or null.
isEmpty(byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive bytes is empty or null.
isEmpty(char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive chars is empty or null.
isEmpty(double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive doubles is empty or null.
isEmpty(float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive floats is empty or null.
isEmpty(int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive ints is empty or null.
isEmpty(long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive longs is empty or null.
isEmpty(short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive shorts is empty or null.
isEmpty(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of Objects is empty or null.
isEmpty(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if a String is empty ("") or null.
isEmptyTokenAsNull() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets whether the tokenizer currently returns empty tokens as null.
isEquals() - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Returns true if the fields that have been checked are all equal.
isEquals(Object, Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Compares two arrays, using equals(), handling multi-dimensional arrays correctly.
isFalse(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Checks if a Boolean value is false, handling null by returning false.
isFieldSeparatorAtEnd() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether the field separator should be added at the end of each buffer.
isFieldSeparatorAtStart() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether the field separator should be added at the start of each buffer.
isFullDetail(Boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Is this field to be output in full detail.
isIgnoreEmptyTokens() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets whether the tokenizer currently ignores empty tokens.
isIn(char, char) - Static method in class org.openprovenance.apache.commons.lang.CharRange
Constructs a CharRange over a set of characters.
isInnerClass(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Is the specified class an inner class or static nested class.
isJavaAwtHeadless() - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Returns whether the SystemUtils.JAVA_AWT_HEADLESS value is true.
isJavaVersionAtLeast(float) - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Is the Java version at least the requested version.
isJavaVersionAtLeast(int) - Static method in class org.openprovenance.apache.commons.lang.SystemUtils
Is the Java version at least the requested version.
isMatch(char[], int) - Method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns the number of matching characters, zero for no match.
isMatch(char[], int, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns the number of matching characters, zero for no match.
isNCNameStartCharToEscape(char) - Static method in class org.openprovenance.prov.model.QualifiedNameUtils
 
isNegated() - Method in class org.openprovenance.apache.commons.lang.CharRange
Is this CharRange negated.
isNestedThrowable(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Checks whether this Throwable class can store a cause.
isNot(char) - Static method in class org.openprovenance.apache.commons.lang.CharRange
Constructs a negated CharRange over a single character.
isNotBlank(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if a String is not empty (""), not null and not whitespace only.
isNotEmpty(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive booleans is not empty or not null.
isNotEmpty(byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive bytes is not empty or not null.
isNotEmpty(char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive chars is not empty or not null.
isNotEmpty(double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive doubles is not empty or not null.
isNotEmpty(float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive floats is not empty or not null.
isNotEmpty(int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive ints is not empty or not null.
isNotEmpty(long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive longs is not empty or not null.
isNotEmpty(short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of primitive shorts is not empty or not null.
isNotEmpty(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks if an array of Objects is not empty or not null.
isNotEmpty(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if a String is not empty ("") and not null.
isNotFalse(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Checks if a Boolean value is not false, handling null by returning true.
isNotIn(char, char) - Static method in class org.openprovenance.apache.commons.lang.CharRange
Constructs a negated CharRange over a set of characters.
isNotTrue(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Checks if a Boolean value is not true, handling null by returning true.
isNumber(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Checks whether the String a valid Java number.
isNumeric(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only unicode digits.
isNumericSpace(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only unicode digits or space (' ').
isSameLength(boolean[], boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(byte[], byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(char[], char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(double[], double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(float[], float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(int[], int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(long[], long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(short[], short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameLength(Object[], Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same length, treating null arrays as length 0.
isSameType(Object, Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Checks whether two arrays are the same type taking into account multi-dimensional arrays.
isShortClassName() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Deprecated.
Use ToStringStyle.isUseShortClassName() Method will be removed in Commons Lang 3.0.
isThrowableNested() - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Checks if the Throwable class has a getCause method.
isTrue(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Checks if a Boolean value is true, handling null by returning false.
isUnqualified() - Method in interface org.openprovenance.prov.model.extension.QualifiedAlternateOf
 
isUnqualified() - Method in interface org.openprovenance.prov.model.extension.QualifiedHadMember
 
isUnqualified() - Method in interface org.openprovenance.prov.model.extension.QualifiedSpecializationOf
 
isUnqualified() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
isUnqualified() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
isUnqualified() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
isUseClassName() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether to use the class name.
isUseFieldNames() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether to use the field names passed in.
isUseIdentityHashCode() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether to use the identity hash code.
isUseShortClassName() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Gets whether to output short or long class names.
isWhitespace(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Checks if the String contains only whitespace.
iterator() - Method in class org.openprovenance.apache.commons.lang.CharRange
Returns an iterator which can be used to walk through the characters described by this range.

J

JAVA_AWT_FONTS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.awt.fonts System Property.
JAVA_AWT_GRAPHICSENV - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.awt.graphicsenv System Property.
JAVA_AWT_HEADLESS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.awt.headless System Property.
JAVA_AWT_PRINTERJOB - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.awt.printerjob System Property.
JAVA_CLASS_PATH - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.class.path System Property.
JAVA_CLASS_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.class.version System Property.
JAVA_COMPILER - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.compiler System Property.
JAVA_ENDORSED_DIRS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.endorsed.dirs System Property.
JAVA_EXT_DIRS - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.ext.dirs System Property.
JAVA_HOME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.home System Property.
JAVA_IO_TMPDIR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.io.tmpdir System Property.
JAVA_LIBRARY_PATH - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.library.path System Property.
JAVA_RUNTIME_NAME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.runtime.name System Property.
JAVA_RUNTIME_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.runtime.version System Property.
JAVA_SPECIFICATION_NAME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.specification.name System Property.
JAVA_SPECIFICATION_VENDOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.specification.vendor System Property.
JAVA_SPECIFICATION_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.specification.version System Property.
JAVA_UTIL_PREFS_PREFERENCES_FACTORY - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.util.prefs.PreferencesFactory System Property.
JAVA_VENDOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vendor System Property.
JAVA_VENDOR_URL - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vendor.url System Property.
JAVA_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.version System Property.
JAVA_VERSION_FLOAT - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the Java version as a float.
JAVA_VERSION_INT - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the Java version as an int.
JAVA_VERSION_TRIMMED - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
Gets the Java version as a String trimming leading letters.
JAVA_VM_INFO - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.info System Property.
JAVA_VM_NAME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.name System Property.
JAVA_VM_SPECIFICATION_NAME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.specification.name System Property.
JAVA_VM_SPECIFICATION_VENDOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.specification.vendor System Property.
JAVA_VM_SPECIFICATION_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.specification.version System Property.
JAVA_VM_VENDOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.vendor System Property.
JAVA_VM_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The java.vm.version System Property.
join(Object[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided array into a single String containing the provided list of elements.
join(Object[], char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided array into a single String containing the provided list of elements.
join(Object[], char, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided array into a single String containing the provided list of elements.
join(Object[], String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided array into a single String containing the provided list of elements.
join(Object[], String, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided array into a single String containing the provided list of elements.
join(Collection, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided Collection into a single String containing the provided elements.
join(Collection, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided Collection into a single String containing the provided elements.
join(Iterator, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided Iterator into a single String containing the provided elements.
join(Iterator, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Joins the elements of the provided Iterator into a single String containing the provided elements.
JPEG - org.openprovenance.prov.interop.Formats.ProvFormat
 
JSON - org.openprovenance.prov.interop.Formats.ProvFormat
 
JSONLD - org.openprovenance.prov.interop.Formats.ProvFormat
 

K

keep(String, String) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Takes an argument in set-syntax, see evaluateSet, and keeps any of characters present in the specified string.
keep(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Takes an argument in set-syntax, see evaluateSet, and keeps any of characters present in the specified string.
Key - Interface in org.openprovenance.prov.model
Interface for a Key of a dictionary.

L

Label - Class in org.openprovenance.prov.vanilla
 
Label - Interface in org.openprovenance.prov.model
Interface for PROV attribute label.
Label(QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.Label
 
LangString - Class in org.openprovenance.prov.vanilla
 
LangString - Interface in org.openprovenance.prov.model
Interface for strings with language attribute.
LangString(String) - Constructor for class org.openprovenance.prov.vanilla.LangString
 
LangString(String, String) - Constructor for class org.openprovenance.prov.vanilla.LangString
 
lastIndexOf(boolean[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(boolean[], boolean, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(byte[], byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(byte[], byte, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the last reference to the specified char.
lastIndexOf(char[], char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(char[], char, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(char, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the last reference to the specified char.
lastIndexOf(double[], double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(double[], double, double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within a given tolerance in the array.
lastIndexOf(double[], double, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(double[], double, int, double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(float[], float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(float[], float, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(int[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(int[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(long[], long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(long[], long, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(short[], short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value within the array.
lastIndexOf(short[], short, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given value in the array starting at the given index.
lastIndexOf(Object[], Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given object within the array.
lastIndexOf(Object[], Object, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Finds the last index of the given object in the array starting at the given index.
lastIndexOf(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the last reference to the specified string.
lastIndexOf(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the last index within a String, handling null.
lastIndexOf(String, char, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the last index within a String from a start position, handling null.
lastIndexOf(String, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder to find the last reference to the specified string starting searching from the given index.
lastIndexOf(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the last index within a String, handling null.
lastIndexOf(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the first index within a String, handling null.
lastIndexOf(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder using the matcher to find the last match.
lastIndexOf(StrMatcher, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Searches the string builder using the matcher to find the last match searching from the given index.
lastIndexOfAny(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Find the latest index of any of a set of potential substrings.
lastIndexOfIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case in-sensitive find of the last index within a String.
lastIndexOfIgnoreCase(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case in-sensitive find of the last index within a String from the specified position.
lastOrdinalIndexOf(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the n-th last index within a String, handling null.
left(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the leftmost len characters of a String.
leftPad(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Left pad a String with spaces (' ').
leftPad(String, int, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Left pad a String with a specified character.
leftPad(String, int, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Left pad a String with a specified String.
leftString(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Extracts the leftmost characters from the string builder without throwing an exception.
length() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the length of the string builder.
length(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets a String's length or 0 if the String is null.
LF - Static variable in class org.openprovenance.apache.commons.lang.CharUtils
linefeed LF ('\n').
LINE_SEPARATOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The line.separator System Property.
LiteralConstructor - Interface in org.openprovenance.prov.model
Interface to convenience factory methods for PROV Literals.
Location - Class in org.openprovenance.prov.vanilla
 
Location - Interface in org.openprovenance.prov.model
Interface for PROV attribute location.
Location(QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.Location
 
log(Object) - Method in class org.openprovenance.prov.model.DocumentEquality
 
LONG_MINUS_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Long constant for minus one.
LONG_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Long constant for one.
LONG_ZERO - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Long constant for zero.
longToolboxVersion - Static variable in class org.openprovenance.prov.configuration.Configuration
 
lowerCase(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Converts a String to lower case as per String.toLowerCase().
lowerCase(String, Locale) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Converts a String to lower case as per String.toLowerCase(Locale).

M

marshalAttribute(Attribute) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
marshalTypedValue(TypedValue, QualifiedName) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
matchSubclasses - Static variable in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Whether to match subclasses via indexOf.
max(byte[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the maximum value in an array.
max(byte, byte, byte) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the maximum of three byte values.
max(double[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the maximum value in an array.
max(double, double, double) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the maximum of three double values.
max(float[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the maximum value in an array.
max(float, float, float) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the maximum of three float values.
max(int[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the maximum value in an array.
max(int, int, int) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the maximum of three int values.
max(long[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the maximum value in an array.
max(long, long, long) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the maximum of three long values.
max(short[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the maximum value in an array.
max(short, short, short) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the maximum of three short values.
max(Comparable, Comparable) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Null safe comparison of Comparables.
MEDIA_APPLICATION_FORM_URLENCODED - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_APPLICATION_JSON - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_APPLICATION_JSONLD - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_APPLICATION_PDF - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_APPLICATION_PROVENANCE_XML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for PROV-XML
MEDIA_APPLICATION_RDF_XML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for RDF/XML
MEDIA_APPLICATION_SQL - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_APPLICATION_TRIG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for TRIG
MEDIA_APPLICATION_XML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_IMAGE_JPEG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_IMAGE_PNG - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_IMAGE_SVG_XML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for SVG
MEDIA_TEXT_CSV - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_TEXT_HTML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_TEXT_PLAIN - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
MEDIA_TEXT_PROVENANCE_NOTATION - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for PROV-N
MEDIA_TEXT_TURTLE - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for Turtle
MEDIA_TEXT_VND_GRAPHVIZ - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
The Internet Media type for Graphviz.
MEDIA_TEXT_XML - Static variable in interface org.openprovenance.prov.interop.InteropMediaType
 
mediaTypes() - Method in interface org.openprovenance.prov.model.ProvSerialiser
 
MentionOf - Interface in org.openprovenance.prov.model
Interface for PROV MentionOf association.
merge(Document) - Method in class org.openprovenance.prov.model.IndexedDocument
This function allows a document to be merged with this IndexedDocument.
MethodUtils - Class in org.openprovenance.apache.commons.lang.reflect
Utility reflection methods focused on methods, originally from Commons BeanUtils.
MethodUtils() - Constructor for class org.openprovenance.apache.commons.lang.reflect.MethodUtils
MethodUtils instances should NOT be constructed in standard programming.
mid(String, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets len characters from the middle of a String.
midString(int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Extracts some characters from the middle of the string builder without throwing an exception.
min(byte[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the minimum value in an array.
min(byte, byte, byte) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the minimum of three byte values.
min(double[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the minimum value in an array.
min(double, double, double) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the minimum of three double values.
min(float[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the minimum value in an array.
min(float, float, float) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the minimum of three float values.
min(int[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the minimum value in an array.
min(int, int, int) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the minimum of three int values.
min(long[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the minimum value in an array.
min(long, long, long) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the minimum of three long values.
min(short[]) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Returns the minimum value in an array.
min(short, short, short) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Gets the minimum of three short values.
min(Comparable, Comparable) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Null safe comparison of Comparables.
minimizeCapacity() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Minimizes the capacity to the actual length of the string.
ModelConstructor - Class in org.openprovenance.prov.vanilla
 
ModelConstructor - Interface in org.openprovenance.prov.model
Interface for constructing concrete representations of the PROV data model
ModelConstructor() - Constructor for class org.openprovenance.prov.vanilla.ModelConstructor
 
ModelConstructorExtension - Interface in org.openprovenance.prov.model
Interface for constructing concrete representations of the PROV data model
MULTI_LINE_STYLE - Static variable in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
The multi line toString style.

N

Name - Class in org.openprovenance.prov.model
Java class defining a set of constant Qualified Names in the PROV, XSD, and RDF namespaces.
Name(ProvFactory) - Constructor for class org.openprovenance.prov.model.Name
 
Namespace - Class in org.openprovenance.prov.model
A class to manipulate Namespaces when creating, serializing and converting prov documents.
Namespace() - Constructor for class org.openprovenance.prov.model.Namespace
 
Namespace(Map<String, String>) - Constructor for class org.openprovenance.prov.model.Namespace
 
Namespace(Namespace) - Constructor for class org.openprovenance.prov.model.Namespace
 
NamespaceGatherer - Class in org.openprovenance.prov.model
Utility class to traverse a document, register all namespaces occurring in QualifiedNames and attributes as well as associated prefixes, and create a Namespace datastructure.
NamespaceGatherer() - Constructor for class org.openprovenance.prov.model.NamespaceGatherer
 
NamespaceGatherer(Hashtable<String, String>, String) - Constructor for class org.openprovenance.prov.model.NamespaceGatherer
 
NamespacePrefixMapper - Interface in org.openprovenance.prov.model
Namespace and prefix declarations for common namespaces manipulated by ProvToolbox.
namespaces - Variable in class org.openprovenance.prov.model.Namespace
 
negate(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Negates the specified boolean.
Nestable - Interface in org.openprovenance.apache.commons.lang.exception
An interface to be implemented by Throwable extensions which would like to be able to nest root exceptions inside themselves.
NestableDelegate - Class in org.openprovenance.apache.commons.lang.exception
A shared implementation of the nestable exception functionality.
NestableDelegate(Nestable) - Constructor for class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Constructs a new NestableDelegate instance to manage the specified Nestable.
NestableRuntimeException - Exception in org.openprovenance.apache.commons.lang.exception
The base class of all runtime exceptions which can contain other exceptions.
NestableRuntimeException() - Constructor for exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Constructs a new NestableRuntimeException without specified detail message.
NestableRuntimeException(String) - Constructor for exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Constructs a new NestableRuntimeException with specified detail message.
NestableRuntimeException(String, Throwable) - Constructor for exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Constructs a new NestableRuntimeException with specified detail message and nested Throwable.
NestableRuntimeException(Throwable) - Constructor for exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Constructs a new NestableRuntimeException with specified nested Throwable.
newActedOnBehalfOf(ActedOnBehalfOf) - Method in class org.openprovenance.prov.model.ProvFactory
 
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a delegation ActedOnBehalfOf
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a delegation ActedOnBehalfOf
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a delegation ActedOnBehalfOf
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a delegation ActedOnBehalfOf
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a delegation ActedOnBehalfOf
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a delegation ActedOnBehalfOf
newActedOnBehalfOf(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newActivity(Activity) - Method in class org.openprovenance.prov.model.ProvFactory
 
newActivity(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newActivity(QualifiedName, String) - Method in class org.openprovenance.prov.model.ProvFactory
 
newActivity(QualifiedName, String) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newActivity(QualifiedName, XMLGregorianCalendar, XMLGregorianCalendar, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newActivity(QualifiedName, XMLGregorianCalendar, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newActivity(QualifiedName, XMLGregorianCalendar, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newAgent(Agent) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a copy of an agent.
newAgent(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a new Agent with provided identifier
newAgent(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
Creates a new Agent with provided identifier
newAgent(QualifiedName, String) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a new Agent with provided identifier and label
newAgent(QualifiedName, String) - Method in class org.openprovenance.prov.vanilla.ProvFactory
Creates a new Agent with provided identifier and label
newAgent(QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newAgent(QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a new Agent with provided identifier and attributes
newAgent(QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newAgent(QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
Creates a new Agent with provided identifier and attributes
newAlternateOf(AlternateOf) - Method in class org.openprovenance.prov.model.ProvFactory
 
newAlternateOf(QualifiedName, QualifiedName) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newAlternateOf(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an alternate AlternateOf
newAlternateOf(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newAlternateOf(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of an alternate AlternateOf
newAttribute(String, String, String, Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newAttribute(Attribute.AttributeKind, Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newAttribute(Attribute.AttributeKind, Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newAttribute(QualifiedName, Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newAttribute(QualifiedName, Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newDerivedByInsertionFrom(QualifiedName, QualifiedName, QualifiedName, List<Entry>, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newDerivedByInsertionFrom(QualifiedName, QualifiedName, QualifiedName, List<Entry>, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDerivedByInsertionFrom(QualifiedName, QualifiedName, QualifiedName, List<Entry>, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newDerivedByRemovalFrom(QualifiedName, QualifiedName, QualifiedName, List<Key>, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newDerivedByRemovalFrom(QualifiedName, QualifiedName, QualifiedName, List<Key>, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDerivedByRemovalFrom(QualifiedName, QualifiedName, QualifiedName, List<Key>, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newDictionaryMembership(QualifiedName, List<Entry>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newDictionaryMembership(QualifiedName, List<Entry>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDictionaryMembership(QualifiedName, List<Entry>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newDocument() - Method in class org.openprovenance.prov.model.ProvFactory
Factory method to construct a Document
newDocument() - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newDocument(Collection<Activity>, Collection<Entity>, Collection<Agent>, Collection<Statement>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDocument(Collection<Activity>, Collection<Entity>, Collection<Agent>, Collection<Statement>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newDocument(Activity[], Entity[], Agent[], Statement[]) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDocument(Document) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDocument(Document) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newDocument(Namespace, Collection<Statement>, Collection<Bundle>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a Document
newDocument(Namespace, Collection<Statement>, Collection<Bundle>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDocument(Namespace, Collection<Statement>, Collection<Bundle>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a Document
newDocument(Namespace, Collection<Statement>, Collection<Bundle>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newDuration(int) - Method in class org.openprovenance.prov.model.ProvFactory
 
newDuration(String) - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for a duration.
newDuration(String) - Method in class org.openprovenance.prov.model.ProvFactory
 
newElement(QualifiedName, String, QualifiedName) - Static method in class org.openprovenance.prov.model.DOMProcessing
Creates a DOM Element for a QualifiedName and content given by value and type
newElement(QualifiedName, String, QualifiedName, String) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
newElement(QualifiedName, QualifiedName) - Static method in class org.openprovenance.prov.model.DOMProcessing
Creates a DOM Element for a QualifiedName and content given by value
newElement(QualifiedName, Element) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
newEntity(Entity) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a copy of an entity.
newEntity(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a new Entity with provided identifier
newEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newEntity(QualifiedName, String) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a new Entity with provided identifier and label
newEntity(QualifiedName, String) - Method in class org.openprovenance.prov.vanilla.ProvFactory
Creates a new Entity with provided identifier and label
newEntity(QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newEntity(QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
Creates a new Entity with provided identifier and attributes
newEntity(QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newEntity(QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
Creates a new Entity with provided identifier and attributes
newEntry(Key, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
Factory method for Key-entity entries.
newGDay(int) - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for a gDay.
newGDay(int) - Method in class org.openprovenance.prov.model.ProvFactory
 
newGMonth(int) - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for a gMonth.
newGMonth(int) - Method in class org.openprovenance.prov.model.ProvFactory
 
newGMonthDay(int, int) - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for a gMonthDay.
newGMonthDay(int, int) - Method in class org.openprovenance.prov.model.ProvFactory
 
newGYear(int) - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for a gYear.
newGYear(int) - Method in class org.openprovenance.prov.model.ProvFactory
 
newHadMember(HadMember) - Method in class org.openprovenance.prov.model.ProvFactory
 
newHadMember(QualifiedName, Collection<QualifiedName>) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newHadMember(QualifiedName, Collection<QualifiedName>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newHadMember(QualifiedName, Collection<QualifiedName>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newHadMember(QualifiedName, Collection<QualifiedName>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newHadMember(QualifiedName, QualifiedName...) - Method in class org.openprovenance.prov.model.ProvFactory
 
newHadMember(QualifiedName, QualifiedName...) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newInternationalizedString(String) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newInternationalizedString(String) - Method in class org.openprovenance.prov.model.ProvFactory
 
newInternationalizedString(String) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newInternationalizedString(String) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newInternationalizedString(String, String) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newInternationalizedString(String, String) - Method in class org.openprovenance.prov.model.ProvFactory
 
newInternationalizedString(String, String) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newInternationalizedString(String, String) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newISOTime(String) - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for a dateTime.
newISOTime(String) - Method in class org.openprovenance.prov.model.ProvFactory
 
newKey(Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newKey(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newLabel(Object, QualifiedName) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newLabel(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newLabel(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newLocation(Object, QualifiedName) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newLocation(Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newLocation(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newLocation(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newMentionOf(MentionOf) - Method in class org.openprovenance.prov.model.ProvFactory
 
newMentionOf(QualifiedName, QualifiedName, QualifiedName) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newMentionOf(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newMentionOf(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newNamedBundle(QualifiedName, Collection<Activity>, Collection<Entity>, Collection<Agent>, Collection<Statement>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newNamedBundle(QualifiedName, Collection<Activity>, Collection<Entity>, Collection<Agent>, Collection<Statement>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newNamedBundle(QualifiedName, Collection<Statement>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newNamedBundle(QualifiedName, Collection<Statement>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newNamedBundle(QualifiedName, Namespace, Collection<Statement>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a Bundle Bundle
newNamedBundle(QualifiedName, Namespace, Collection<Statement>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newNamedBundle(QualifiedName, Namespace, Collection<Statement>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a Bundle Bundle
newNamedBundle(QualifiedName, Namespace, Collection<Statement>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newNamespace() - Method in class org.openprovenance.prov.model.ProvFactory
 
newNamespace(Namespace) - Method in class org.openprovenance.prov.model.ProvFactory
 
newOther(String, String, String, Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newOther(QualifiedName, Object, QualifiedName) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newOther(QualifiedName, Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newOther(QualifiedName, Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newOther(QualifiedName, Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newPrefix(String) - Method in class org.openprovenance.prov.model.Namespace
 
newProvExtQualifiedName(String) - Method in class org.openprovenance.prov.model.Name
 
newProvQualifiedName(String) - Method in class org.openprovenance.prov.model.Name
 
newQualifiedAlternateOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructorExtension
 
newQualifiedAlternateOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newQualifiedAlternateOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newQualifiedHadMember(QualifiedName, QualifiedName, Collection<QualifiedName>, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructorExtension
 
newQualifiedHadMember(QualifiedName, QualifiedName, Collection<QualifiedName>, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newQualifiedHadMember(QualifiedName, QualifiedName, Collection<QualifiedName>, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newQualifiedName(String, String, String) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method for QualifiedName.
newQualifiedName(String, String, String) - Method in class org.openprovenance.prov.model.ProvFactory
 
newQualifiedName(String, String, String) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method for QualifiedName.
newQualifiedName(String, String, String) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newQualifiedName(String, String, String, ProvUtilities.BuildFlag) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method for QualifiedName.
newQualifiedName(String, String, String, ProvUtilities.BuildFlag) - Method in class org.openprovenance.prov.model.ProvFactory
 
newQualifiedName(String, String, String, ProvUtilities.BuildFlag) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method for QualifiedName.
newQualifiedName(String, String, String, ProvUtilities.BuildFlag) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newQualifiedName(QName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newQualifiedSpecializationOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructorExtension
 
newQualifiedSpecializationOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newQualifiedSpecializationOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newRdfQualifiedName(String) - Method in class org.openprovenance.prov.model.Name
 
newRole(Object, QualifiedName) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newRole(Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newRole(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newRole(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newSpecializationOf(QualifiedName, QualifiedName) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
newSpecializationOf(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a specialization SpecializationOf
newSpecializationOf(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newSpecializationOf(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newSpecializationOf(SpecializationOf) - Method in class org.openprovenance.prov.model.ProvFactory
 
newStatement(T) - Method in class org.openprovenance.prov.model.ProvFactory
 
newTime(Date) - Method in class org.openprovenance.prov.model.ProvFactory
 
newTimeNow() - Method in interface org.openprovenance.prov.model.LiteralConstructor
Factory method for this moment's time expressed as dateTime.
newTimeNow() - Method in class org.openprovenance.prov.model.ProvFactory
 
newToolboxQualifiedName(String) - Method in class org.openprovenance.prov.model.Name
 
newType(Object, QualifiedName) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newType(Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newType(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newType(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newUsed(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a usage Used
newUsed(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a usage Used
newUsed(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a usage Used
newUsed(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a usage Used
newUsed(QualifiedName, QualifiedName, String, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newUsed(QualifiedName, QualifiedName, String, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newUsed(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a usage Used
newUsed(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a usage Used
newUsed(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar) - Method in class org.openprovenance.prov.model.ProvFactory
 
newUsed(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newUsed(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a Usage Used
newUsed(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newUsed(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a Usage Used
newUsed(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newUsed(Used) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a usage Used from another
newValue(int) - Method in class org.openprovenance.prov.model.ProvFactory
Factory method to create an instance of the PROV-DM prov:value attribute (see Value).
newValue(Object, QualifiedName) - Method in interface org.openprovenance.prov.model.AtomConstructor
 
newValue(Object, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
Factory method to create an instance of the PROV-DM prov:value attribute (see Value).
newValue(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
newValue(Object, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newValue(String) - Method in class org.openprovenance.prov.model.ProvFactory
Factory method to create an instance of of the PROV-DM prov:value attribute (see Value).
newWasAssociatedWith(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an Association WasAssociatedWith
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an Association WasAssociatedWith
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of an Association WasAssociatedWith
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of an Association WasAssociatedWith
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of an Association WasAssociatedWith
newWasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasAssociatedWith(WasAssociatedWith) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasAssociatedWith(WasAssociatedWith) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasAttributedTo(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasAttributedTo(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an attribution WasAttributedTo
newWasAttributedTo(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of an attribution WasAttributedTo
newWasAttributedTo(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of an attribution WasAttributedTo
newWasAttributedTo(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasAttributedTo(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of an attribution WasAttributedTo
newWasAttributedTo(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasAttributedTo(WasAttributedTo) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasDerivedFrom(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a derivation WasDerivedFrom
newWasDerivedFrom(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a derivation WasDerivedFrom
newWasDerivedFrom(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a derivation WasDerivedFrom
newWasDerivedFrom(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a derivation WasDerivedFrom
newWasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a derivation WasDerivedFrom
newWasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a derivation WasDerivedFrom
newWasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasDerivedFrom(WasDerivedFrom) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasEndedBy(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an end WasEndedBy
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an end WasEndedBy
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an end WasEndedBy
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a end WasEndedBy
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of an end WasEndedBy
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of an end WasEndedBy
newWasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasEndedBy(WasEndedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasGeneratedBy(Entity, String, Activity) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasGeneratedBy(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasGeneratedBy(QualifiedName, Entity, String, Activity) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasGeneratedBy(QualifiedName, QualifiedName, String, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasGeneratedBy(QualifiedName, QualifiedName, String, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasGeneratedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a generation WasGeneratedBy
newWasGeneratedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a generation WasGeneratedBy
newWasGeneratedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasGeneratedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a generation WasGeneratedBy
newWasGeneratedBy(WasGeneratedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInfluencedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an influence WasInfluencedBy
newWasInfluencedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of an influence WasInfluencedBy
newWasInfluencedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of an influence WasInfluencedBy
newWasInfluencedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInfluencedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of an influence WasInfluencedBy
newWasInfluencedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasInfluencedBy(WasInfluencedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInformedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an communication WasInformedBy
newWasInformedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of an communication WasInformedBy
newWasInformedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of an communication WasInformedBy
newWasInformedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInformedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of an communication WasInformedBy
newWasInformedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasInformedBy(WasInformedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInvalidatedBy(QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInvalidatedBy(QualifiedName, QualifiedName, String, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of an invalidation WasInvalidatedBy
newWasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of an invalidation WasInvalidatedBy
newWasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of an invalidation WasInvalidatedBy
newWasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of an invalidation WasInvalidatedBy
newWasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasInvalidatedBy(WasInvalidatedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasStartedBy(QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a start WasStartedBy
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.model.ProvFactory
A factory method to create an instance of a start WasStartedBy
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName) - Method in class org.openprovenance.prov.vanilla.ProvFactory
A factory method to create an instance of a start WasStartedBy
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in interface org.openprovenance.prov.model.ModelConstructor
A factory method to create an instance of a start WasStartedBy
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
A factory method to create an instance of a start WasStartedBy
newWasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Method in class org.openprovenance.prov.vanilla.ProvFactory
 
newWasStartedBy(WasStartedBy) - Method in class org.openprovenance.prov.model.ProvFactory
 
newXMLGregorianCalendar(GregorianCalendar) - Method in class org.openprovenance.prov.model.ProvFactory
 
newXsdQualifiedName(String) - Method in class org.openprovenance.prov.model.Name
 
newYear(int) - Method in class org.openprovenance.prov.model.ProvFactory
 
next() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the next token.
nextIndex() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the index of the next token to return.
nextToken() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the next token from the String.
NO_FIELD_NAMES_STYLE - Static variable in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
The no field names toString style.
NOCHEK - org.openprovenance.prov.model.ProvUtilities.BuildFlag
 
noneMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Matches no characters.
normalizeSpace(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
notEqual(Object, Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Compares two objects for inequality, where either one or both objects may be null.
NULL - Static variable in class org.openprovenance.apache.commons.lang.ObjectUtils
Singleton used as a null placeholder where null has another meaning.
NullArgumentException - Exception in org.openprovenance.apache.commons.lang
Thrown to indicate that an argument was null and should not have been.
NullArgumentException(String) - Constructor for exception org.openprovenance.apache.commons.lang.NullArgumentException
Instantiates with the given argument name.
nullToEmpty(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Character[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Integer[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(Short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
nullToEmpty(String[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Defensive programming technique to change a null reference to an empty one.
NumberUtils - Class in org.openprovenance.apache.commons.lang.math
Provides extra functionality for Java Number classes.
NumberUtils() - Constructor for class org.openprovenance.apache.commons.lang.math.NumberUtils
NumberUtils instances should NOT be constructed in standard programming.

O

ObjectFactory - Interface in org.openprovenance.prov.model
This interface specifies core functionality similar to the JAXB ObjectFactory.
ObjectUtils - Class in org.openprovenance.apache.commons.lang
Operations on Object.
ObjectUtils() - Constructor for class org.openprovenance.apache.commons.lang.ObjectUtils
ObjectUtils instances should NOT be constructed in standard programming.
ObjectUtils.Null - Class in org.openprovenance.apache.commons.lang
Class used as a null placeholder where null has another meaning.
of - Variable in class org.openprovenance.prov.model.ProvFactory
 
ordinalIndexOf(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Finds the n-th index within a String, handling null.
org.openprovenance.apache.commons.lang - package org.openprovenance.apache.commons.lang
 
org.openprovenance.apache.commons.lang.builder - package org.openprovenance.apache.commons.lang.builder
 
org.openprovenance.apache.commons.lang.exception - package org.openprovenance.apache.commons.lang.exception
 
org.openprovenance.apache.commons.lang.math - package org.openprovenance.apache.commons.lang.math
 
org.openprovenance.apache.commons.lang.reflect - package org.openprovenance.apache.commons.lang.reflect
 
org.openprovenance.apache.commons.lang.text - package org.openprovenance.apache.commons.lang.text
 
org.openprovenance.prov.configuration - package org.openprovenance.prov.configuration
 
org.openprovenance.prov.interop - package org.openprovenance.prov.interop
 
org.openprovenance.prov.model - package org.openprovenance.prov.model
Provides the classes necessary to manipulate the PROV Data Model in Java, irrespectively of the serialization chosen for it.
org.openprovenance.prov.model.exception - package org.openprovenance.prov.model.exception
 
org.openprovenance.prov.model.extension - package org.openprovenance.prov.model.extension
 
org.openprovenance.prov.vanilla - package org.openprovenance.prov.vanilla
 
OS_ARCH - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The os.arch System Property.
OS_NAME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The os.name System Property.
OS_VERSION - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The os.version System Property.
Other - Class in org.openprovenance.prov.vanilla
 
Other - Interface in org.openprovenance.prov.model
Interface for non-PROV attributes.
Other(QualifiedName, QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.Other
 
OTHER - org.openprovenance.prov.model.Attribute.AttributeKind
 
OUTPUT - org.openprovenance.prov.interop.Formats.ProvFormatType
 
overlay(String, String, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Overlays part of a String with another String.
overlayString(String, String, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use better named StringUtils.overlay(String, String, int, int) instead. Method will be removed in Commons Lang 3.0.

P

PACKAGE_SEPARATOR - Static variable in class org.openprovenance.apache.commons.lang.ClassUtils
The package separator String: ".".
PACKAGE_SEPARATOR_CHAR - Static variable in class org.openprovenance.apache.commons.lang.ClassUtils
The package separator character: '.' == 46.
packageList - Static variable in class org.openprovenance.prov.model.ProvFactory
 
ParserException - Exception in org.openprovenance.prov.model.exception
 
ParserException() - Constructor for exception org.openprovenance.prov.model.exception.ParserException
 
ParserException(String) - Constructor for exception org.openprovenance.prov.model.exception.ParserException
 
ParserException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.ParserException
 
ParserException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.ParserException
 
PATH_SEPARATOR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The path.separator System Property.
patternExactMatch(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
PDF - org.openprovenance.prov.interop.Formats.ProvFormat
 
plan - Variable in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
PNG - org.openprovenance.prov.interop.Formats.ProvFormat
 
prechomp(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.substringAfter(String,String) instead. Method will be removed in Commons Lang 3.0.
prefixes - Variable in class org.openprovenance.prov.model.Namespace
 
previous() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the token previous to the last returned token.
previousIndex() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the index of the previous token.
previousToken() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the previous token from the String.
primitivesToWrappers(Class[]) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Converts the specified array of primitive Class objects to an array of its corresponding wrapper Class objects.
primitiveToWrapper(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Converts the specified primitive Class object to its corresponding wrapper Class object.
PRINTER_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
printPartialStackTrace(PrintWriter) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Prints the stack trace for this exception only--root cause not included--using the provided writer.
printPartialStackTrace(PrintWriter) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Prints the stack trace for this exception only--root cause not included--using the provided writer.
printRootCauseStackTrace(Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Prints a compact stack trace for the root cause of a throwable to System.err.
printRootCauseStackTrace(Throwable, PrintStream) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Prints a compact stack trace for the root cause of a throwable.
printRootCauseStackTrace(Throwable, PrintWriter) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Prints a compact stack trace for the root cause of a throwable.
printStackTrace() - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Prints the stack trace of this exception the the standar error stream.
printStackTrace() - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
printStackTrace(PrintStream) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Prints the stack trace of this exception to the specified print stream.
printStackTrace(PrintStream) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Prints the stack trace of this exception to the specified stream.
printStackTrace(PrintStream) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Prints the stack trace of this exception to the specified print stream.
printStackTrace(PrintWriter) - Method in interface org.openprovenance.apache.commons.lang.exception.Nestable
Prints the stack trace of this exception to the specified print writer.
printStackTrace(PrintWriter) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Prints the stack trace of this exception to the specified writer.
printStackTrace(PrintWriter) - Method in exception org.openprovenance.apache.commons.lang.exception.NestableRuntimeException
Prints the stack trace of this exception to the specified print writer.
printURI(URI) - Static method in class org.openprovenance.prov.model.ProvFactory
 
PROV_ACTIVITY - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_AGENT - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_ALTERNATE - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_ASSOCIATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_ATTRIBUTION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_BUNDLE - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_BUNDLE - Variable in class org.openprovenance.prov.model.Name
 
PROV_COMMUNICATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_DELEGATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_DERIVATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_DICTIONARY_INSERTION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_DICTIONARY_MEMBERSHIP - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_DICTIONARY_REMOVAL - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_END - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_ENTITY - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_EXT_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
PROV_GENERATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_INFLUENCE - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_INVALIDATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_KEY - org.openprovenance.prov.model.Attribute.AttributeKind
 
PROV_KEY - Variable in class org.openprovenance.prov.model.Name
 
PROV_LABEL - org.openprovenance.prov.model.Attribute.AttributeKind
 
PROV_LABEL - Variable in class org.openprovenance.prov.model.Name
 
PROV_LABEL_URI - Static variable in class org.openprovenance.prov.vanilla.ProvUtilities
 
PROV_LANG_STRING - Variable in class org.openprovenance.prov.model.Name
 
PROV_LOCATION - org.openprovenance.prov.model.Attribute.AttributeKind
 
PROV_LOCATION - Variable in class org.openprovenance.prov.model.Name
 
PROV_LOCATION_URI - Static variable in class org.openprovenance.prov.vanilla.ProvUtilities
 
PROV_MEMBERSHIP - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_MENTION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
PROV_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
PROV_PRIMARY_SOURCE - Variable in class org.openprovenance.prov.model.Name
 
PROV_QUALIFIED_NAME - Variable in class org.openprovenance.prov.model.Name
 
PROV_QUOTATION - Variable in class org.openprovenance.prov.model.Name
 
PROV_REVISION - Variable in class org.openprovenance.prov.model.Name
 
PROV_ROLE - org.openprovenance.prov.model.Attribute.AttributeKind
 
PROV_ROLE - Variable in class org.openprovenance.prov.model.Name
 
PROV_ROLE_URI - Static variable in class org.openprovenance.prov.vanilla.ProvUtilities
 
PROV_SPECIALIZATION - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_START - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_TYPE - org.openprovenance.prov.model.Attribute.AttributeKind
 
PROV_TYPE - Variable in class org.openprovenance.prov.model.Name
 
PROV_TYPE_URI - Static variable in class org.openprovenance.prov.vanilla.ProvUtilities
 
PROV_USAGE - org.openprovenance.prov.model.StatementOrBundle.Kind
 
PROV_VALUE - org.openprovenance.prov.model.Attribute.AttributeKind
 
PROV_VALUE - Variable in class org.openprovenance.prov.model.Name
 
PROV_VALUE_URI - Static variable in class org.openprovenance.prov.vanilla.ProvUtilities
 
ProvDeserialiser - Interface in org.openprovenance.prov.model
A low-level interface for serialization of documents.
ProvFactory - Class in org.openprovenance.prov.model
A stateless factory for PROV objects.
ProvFactory - Class in org.openprovenance.prov.vanilla
 
ProvFactory() - Constructor for class org.openprovenance.prov.vanilla.ProvFactory
 
ProvFactory(ObjectFactory) - Constructor for class org.openprovenance.prov.model.ProvFactory
 
ProvFactory(ObjectFactory) - Constructor for class org.openprovenance.prov.vanilla.ProvFactory
 
ProvFactory(ObjectFactory, ModelConstructor) - Constructor for class org.openprovenance.prov.vanilla.ProvFactory
 
ProvFactory.Cloner - Class in org.openprovenance.prov.model
 
PROVN - org.openprovenance.prov.interop.Formats.ProvFormat
 
ProvSerialiser - Interface in org.openprovenance.prov.model
A low-level interface for JAXB-compatible serialization of documents.
ProvUtilities - Class in org.openprovenance.prov.model
Utilities for manipulating PROV Descriptions.
ProvUtilities - Class in org.openprovenance.prov.vanilla
 
ProvUtilities() - Constructor for class org.openprovenance.prov.model.ProvUtilities
 
ProvUtilities() - Constructor for class org.openprovenance.prov.vanilla.ProvUtilities
 
ProvUtilities.BuildFlag - Enum in org.openprovenance.prov.model
 

Q

QUALIFIED_NAME_UNKNOWN_TYPE - Variable in class org.openprovenance.prov.model.Name
 
QUALIFIED_NAME_XSD_STRING - Static variable in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
QualifiedAlternateOf - Class in org.openprovenance.prov.vanilla
 
QualifiedAlternateOf - Interface in org.openprovenance.prov.model.extension
 
QualifiedAlternateOf(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
QualifiedAlternateOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
QualifiedHadMember - Class in org.openprovenance.prov.vanilla
 
QualifiedHadMember - Interface in org.openprovenance.prov.model.extension
 
QualifiedHadMember(QualifiedName, QualifiedName, Collection<QualifiedName>, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.QualifiedHadMember
 
qualifiedName(String, String, ProvFactory) - Method in class org.openprovenance.prov.model.Namespace
Creates a qualified name, with given prefix and local name.
QualifiedName - Class in org.openprovenance.prov.vanilla
 
QualifiedName - Interface in org.openprovenance.prov.model
Interface for PROV Qualified Name.
QualifiedName(String, String, String) - Constructor for class org.openprovenance.prov.vanilla.QualifiedName
 
QualifiedNameException - Exception in org.openprovenance.prov.model.exception
An exception thrown when QualifiedName processing is problematic.
QualifiedNameException() - Constructor for exception org.openprovenance.prov.model.exception.QualifiedNameException
 
QualifiedNameException(String) - Constructor for exception org.openprovenance.prov.model.exception.QualifiedNameException
 
QualifiedNameException(String, Throwable) - Constructor for exception org.openprovenance.prov.model.exception.QualifiedNameException
 
QualifiedNameException(Throwable) - Constructor for exception org.openprovenance.prov.model.exception.QualifiedNameException
 
qualifiedNameToString(QName) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
qualifiedNameToString(QName) - Method in class org.openprovenance.prov.model.Namespace
 
qualifiedNameToString(QName, Namespace) - Method in class org.openprovenance.prov.model.Namespace
 
qualifiedNameToString(QualifiedName) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
qualifiedNameToString(QualifiedName) - Method in class org.openprovenance.prov.model.Namespace
 
qualifiedNameToString(QualifiedName, Namespace) - Method in class org.openprovenance.prov.model.Namespace
 
qualifiedNameToStringWithNamespace(QualifiedName) - Static method in class org.openprovenance.prov.model.Namespace
 
QualifiedNameUtils - Class in org.openprovenance.prov.model
 
QualifiedNameUtils() - Constructor for class org.openprovenance.prov.model.QualifiedNameUtils
 
QualifiedRelation - Interface in org.openprovenance.prov.model
Interface to denote a relation that carries some influence.
QualifiedSpecializationOf - Class in org.openprovenance.prov.vanilla
 
QualifiedSpecializationOf - Interface in org.openprovenance.prov.model.extension
 
QualifiedSpecializationOf(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
quoteMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns a matcher which matches the single or double quote character.

R

RDF_LITERAL - Variable in class org.openprovenance.prov.model.Name
 
RDF_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
RDF_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
RDFS_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
RDFS_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
RDFXML - org.openprovenance.prov.interop.Formats.ProvFormat
 
ref - Variable in class org.openprovenance.prov.vanilla.QualifiedName
 
reflectionAppendArray(Object) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Append to the toString an Object array.
reflectionAppendArrayDetail(StringBuffer, String, Object) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Append to the toString the detail of an array type.
reflectionEquals(Object, Object) - Static method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
This method uses reflection to determine if the two Objects are equal.
reflectionEquals(Object, Object, boolean) - Static method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
This method uses reflection to determine if the two Objects are equal.
reflectionEquals(Object, Object, boolean, Class) - Static method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
This method uses reflection to determine if the two Objects are equal.
reflectionEquals(Object, Object, boolean, Class, String[]) - Static method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
This method uses reflection to determine if the two Objects are equal.
reflectionEquals(Object, Object, String[]) - Static method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
This method uses reflection to determine if the two Objects are equal.
reflectionEquals(Object, Object, Collection) - Static method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
This method uses reflection to determine if the two Objects are equal.
reflectionHashCode(int, int, Object) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionHashCode(int, int, Object, boolean) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionHashCode(int, int, Object, boolean, Class) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
reflectionHashCode(int, int, Object, boolean, Class, String[]) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionHashCode(Object) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionHashCode(Object, boolean) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionHashCode(Object, String[]) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionHashCode(Object, Collection) - Static method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
This method uses reflection to build a valid hash code.
reflectionToString(Object) - Static method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Uses ReflectionToStringBuilder to generate a toString for the specified object.
reflectionToString(Object, ToStringStyle) - Static method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Uses ReflectionToStringBuilder to generate a toString for the specified object.
reflectionToString(Object, ToStringStyle, boolean) - Static method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Uses ReflectionToStringBuilder to generate a toString for the specified object.
reflectionToString(Object, ToStringStyle, boolean, Class) - Static method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Uses ReflectionToStringBuilder to generate a toString for the specified object.
ReflectionToStringBuilder - Class in org.openprovenance.apache.commons.lang.builder
Assists in implementing Object.toString() methods using reflection.
ReflectionToStringBuilder(Object) - Constructor for class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Constructor.
ReflectionToStringBuilder(Object, ToStringStyle) - Constructor for class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Constructor.
ReflectionToStringBuilder(Object, ToStringStyle, StringBuffer) - Constructor for class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Constructor.
ReflectionToStringBuilder(Object, ToStringStyle, StringBuffer, Class, boolean) - Constructor for class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
ReflectionToStringBuilder(Object, ToStringStyle, StringBuffer, Class, boolean, boolean) - Constructor for class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Constructor.
register(String, String) - Method in class org.openprovenance.prov.model.Namespace
 
register(Location) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
register(Other) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
register(Role) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
register(Type) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
registerDefault(String) - Method in class org.openprovenance.prov.model.Namespace
 
registerLocation(List<Location>) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
registerOther(List<Other>) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
registerPotentialQualifiedName(Object) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
registerRole(List<Role>) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
registerType(List<Type>) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
registerValue(Value) - Method in class org.openprovenance.prov.model.NamespaceGatherer
 
Relation - Interface in org.openprovenance.prov.model
An interface for all PROV Statement that are a relation.
remove() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Unsupported ListIterator operation.
remove(boolean[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(byte[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(char[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(double[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(float[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(int[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(long[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(short[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(Object[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the element at the specified position from the specified array.
remove(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes all occurrences of a character from within the source string.
remove(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes all occurrences of a substring from within the source string.
removeCauseMethodName(String) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Removes from the list of method names used in the search for Throwable objects.
removeCommonFrames(List, List) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Removes common frames from the cause trace given the two stack traces.
removeElement(boolean[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(byte[], byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(char[], char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(double[], double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(float[], float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(int[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(long[], long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(short[], short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeElement(Object[], Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Removes the first occurrence of the specified element from the specified array.
removeEnd(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes a substring only if it is at the end of a source string, otherwise returns the source string.
removeEndIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case insensitive removal of a substring if it is at the end of a source string, otherwise returns the source string.
removeLastFieldSeparator(StringBuffer) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Remove the last field separator from the buffer.
removeStart(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes a substring only if it is at the begining of a source string, otherwise returns the source string.
removeStartIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case insensitive removal of a substring if it is at the begining of a source string, otherwise returns the source string.
repeat(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Repeat a String repeat times to form a new String.
repeat(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Repeat a String repeat times to form a new String, with a String separator injected each time.
replace(int, int, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces a portion of the string builder with another string.
replace(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces all occurrences of a String within another String.
replace(String, String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces a String with another String inside a larger String, for the first max values of the search String.
replace(StrMatcher, String, int, int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Advanced search and replaces within the builder using a matcher.
replaceAll(char, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces the search character with the replace character throughout the builder.
replaceAll(String, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces the search string with the replace string throughout the builder.
replaceAll(StrMatcher, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces all matches within the builder with the replace string.
replaceChars(String, char, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces all occurrences of a character in a String with another.
replaceChars(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces multiple characters in a String in one go.
replaceEach(String, String[], String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces all occurrences of Strings within another String.
replaceEachRepeatedly(String, String[], String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces all occurrences of Strings within another String.
replaceFirst(char, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces the first instance of the search character with the replace character in the builder.
replaceFirst(String, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces the first instance of the search string with the replace string.
replaceFirst(StrMatcher, String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Replaces the first match within the builder with the replace string.
replaceOnce(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Replaces a String with another String inside a larger String, once.
reset() - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Reset the EqualsBuilder so you can use the same object again
reset() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Resets this tokenizer, forgetting all parsing and iteration already completed.
reset(char[]) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Reset this tokenizer, giving it a new input string to parse.
reset(String) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Reset this tokenizer, giving it a new input string to parse.
responsible - Variable in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
reverse() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Reverses the string builder placing each character in the opposite index.
reverse(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Reverses the order of the given array.
reverse(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Reverses a String as per StrBuilder.reverse().
reverseDelimited(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Reverses a String that is delimited by a specific character.
reverseDelimitedString(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use StringUtils.reverseDelimited(String, char) instead. This method is broken as the join doesn't know which char to use. Method will be removed in Commons Lang 3.0.
right(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the rightmost len characters of a String.
rightPad(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Right pad a String with spaces (' ').
rightPad(String, int, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Right pad a String with a specified character.
rightPad(String, int, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Right pad a String with a specified String.
rightString(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Extracts the rightmost characters from the string builder without throwing an exception.
Role - Class in org.openprovenance.prov.vanilla
 
Role - Interface in org.openprovenance.prov.model
Interface for PROV attribute role.
Role(QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.Role
 

S

serialiseDocument(OutputStream, Document, boolean) - Method in interface org.openprovenance.prov.model.ProvSerialiser
Serializes a document to a stream
serialiseDocument(OutputStream, Document, String, boolean) - Method in interface org.openprovenance.prov.model.ProvSerialiser
 
set(Object) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Unsupported ListIterator operation.
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.ActedOnBehalfOf
Set the activity identifier.
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.Used
 
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasAssociatedWith
 
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasEndedBy
 
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasGeneratedBy
 
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasInvalidatedBy
 
setActivity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasStartedBy
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Used
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
setActivity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
setAgent(QualifiedName) - Method in interface org.openprovenance.prov.model.WasAssociatedWith
 
setAgent(QualifiedName) - Method in interface org.openprovenance.prov.model.WasAttributedTo
Set the identifier of the agent whom the entity is ascribed to.
setAgent(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
setAgent(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
setAlternate1(QualifiedName) - Method in interface org.openprovenance.prov.model.AlternateOf
Sets the identifier for the first of the two entities.
setAlternate1(QualifiedName) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
setAlternate1(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
setAlternate2(QualifiedName) - Method in interface org.openprovenance.prov.model.AlternateOf
Sets the identifier for the second of the two entities.
setAlternate2(QualifiedName) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
setAlternate2(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
setAppendStatics(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Sets whether or not to append static fields.
setAppendTransients(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Sets whether or not to append transient fields.
setArrayContentDetail(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether to output array content detail.
setArrayEnd(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the array end text.
setArraySeparator(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the array separator text.
setArrayStart(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the array start text.
setAttributes(HasOther, Collection<Attribute>) - Method in class org.openprovenance.prov.model.ProvFactory
 
setBundle(QualifiedName) - Method in interface org.openprovenance.prov.model.MentionOf
Set a bundle's identifier
setCause(Throwable, Throwable) - Static method in class org.openprovenance.apache.commons.lang.exception.ExceptionUtils
Sets the cause of a Throwable using introspection, allowing source code compatibility between pre-1.4 and post-1.4 Java releases.
setCharAt(int, char) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Sets the character at the specified index.
setCollection(QualifiedName) - Method in interface org.openprovenance.prov.model.HadMember
Set an identifier for the collection whose member is asserted
setCollection(QualifiedName) - Method in class org.openprovenance.prov.vanilla.HadMember
Set an identifier for the collection whose member is asserted
setCollection(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
setContentEnd(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the content end text.
setContentStart(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the content start text.
setDefaultFullDetail(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether to use full detail when the caller doesn't specify.
setDefaultNamespace(String) - Method in class org.openprovenance.prov.model.Namespace
 
setDefaultStyle(ToStringStyle) - Static method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Sets the default ToStringStyle to use.
setDelegate(QualifiedName) - Method in interface org.openprovenance.prov.model.ActedOnBehalfOf
Set the delegate identifier.
setDelegate(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
setDelimiterChar(char) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets the field delimiter character.
setDelimiterMatcher(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets the field delimiter matcher.
setDelimiterString(String) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets the field delimiter string.
setDictionary(QualifiedName) - Method in interface org.openprovenance.prov.model.DictionaryMembership
Set an identifier for the dictionary whose members are asserted.
setElementName(QualifiedName) - Method in interface org.openprovenance.prov.model.Other
Set the elementName
setElementName(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Other
 
setEmptyTokenAsNull(boolean) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets whether the tokenizer should return empty tokens as null.
setEnder(QualifiedName) - Method in interface org.openprovenance.prov.model.WasEndedBy
 
setEnder(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
setEndTime(XMLGregorianCalendar) - Method in interface org.openprovenance.prov.model.Activity
Sets the value of the endTime property.
setEndTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.Activity
 
setEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.Entry
 
setEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.Used
 
setEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasAttributedTo
Set the entity identifier.
setEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasGeneratedBy
 
setEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasInvalidatedBy
 
setEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Used
 
setEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
setEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
setEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
setEquals(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.EqualsBuilder
Sets the isEquals value.
setExcludeFieldNames(String[]) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Sets the field names to exclude.
setFieldNameValueSeparator(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the field name value separator text.
setFieldSeparator(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the field separator text.
setFieldSeparatorAtEnd(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether the field separator should be added at the end of each buffer.
setFieldSeparatorAtStart(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether the field separator should be added at the start of each buffer.
setGeneralEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.MentionOf
Set the general entity's identifier
setGeneralEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.SpecializationOf
Mutator for the entity that is being specialized.
setGeneralEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
setGeneralEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
setGeneratedEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
setGeneratedEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setGeneration(QualifiedName) - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
setGeneration(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setId(QualifiedName) - Method in interface org.openprovenance.prov.model.Identifiable
Sets the value of the id property.
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Activity
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Agent
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Bundle
Sets the value of the id property.
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Entity
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.Used
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
setId(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
setIgnoredChar(char) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Set the character to ignore.
setIgnoredMatcher(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Set the matcher for characters to ignore.
setIgnoreEmptyTokens(boolean) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets whether the tokenizer should ignore and not return empty tokens.
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.Activity
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.Agent
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.Entity
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.Used
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
setIndexedAttributes(Object, Set<Attribute>) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
setInfluencee(QualifiedName) - Method in interface org.openprovenance.prov.model.WasInfluencedBy
 
setInfluencee(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
setInfluencer(QualifiedName) - Method in interface org.openprovenance.prov.model.WasInfluencedBy
 
setInfluencer(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
setInformant(QualifiedName) - Method in interface org.openprovenance.prov.model.WasInformedBy
 
setInformant(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
setInformed(QualifiedName) - Method in interface org.openprovenance.prov.model.WasInformedBy
 
setInformed(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
setKey(Key) - Method in interface org.openprovenance.prov.model.Entry
 
setLang(String) - Method in interface org.openprovenance.prov.model.LangString
Sets the value of the lang property.
setLang(String) - Method in class org.openprovenance.prov.vanilla.LangString
 
setLength(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Updates the length of the builder by either dropping the last characters or adding filler of unicode zero.
setLocalPart(String) - Method in interface org.openprovenance.prov.model.QualifiedName
Set the local part of this QualifiedName.
setLocalPart(String) - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
setNamespace(Namespace) - Method in interface org.openprovenance.prov.model.Bundle
 
setNamespace(Namespace) - Method in interface org.openprovenance.prov.model.Document
Sets the Namespace of this document
setNamespace(Namespace) - Method in class org.openprovenance.prov.vanilla.Bundle
 
setNamespace(Namespace) - Method in class org.openprovenance.prov.vanilla.Document
 
setNamespaceURI(String) - Method in interface org.openprovenance.prov.model.QualifiedName
Set the Namespace URI of this QualifiedName.
setNamespaceURI(String) - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
setNewDictionary(QualifiedName) - Method in interface org.openprovenance.prov.model.DerivedByInsertionFrom
 
setNewDictionary(QualifiedName) - Method in interface org.openprovenance.prov.model.DerivedByRemovalFrom
Set an identifier for the dictionary after the deletion.
setNewLineText(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Sets the text to be appended when a new line is added.
setNullText(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the text to output when null found.
setNullText(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Sets the text to be appended when null is added.
setOldDictionary(QualifiedName) - Method in interface org.openprovenance.prov.model.DerivedByInsertionFrom
 
setOldDictionary(QualifiedName) - Method in interface org.openprovenance.prov.model.DerivedByRemovalFrom
Set an identifier for the dictionary before the deletion.
setParent(Namespace) - Method in class org.openprovenance.prov.model.Namespace
 
setPlan(QualifiedName) - Method in interface org.openprovenance.prov.model.WasAssociatedWith
 
setPlan(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
Set Plan
setPrefix(String) - Method in interface org.openprovenance.prov.model.QualifiedName
 
setPrefix(String) - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
setQuoteChar(char) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets the quote character to use.
setQuoteMatcher(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Set the quote matcher to use.
setResponsible(QualifiedName) - Method in interface org.openprovenance.prov.model.ActedOnBehalfOf
Set the responsible identifier
setResponsible(QualifiedName) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
setShortClassName(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Deprecated.
Use ToStringStyle.setUseShortClassName(boolean) Method will be removed in Commons Lang 3.0.
setSizeEndText(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the end text to output when a Collection, Map or array size is output.
setSizeStartText(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the start text to output when a Collection, Map or array size is output.
setSpecificEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.MentionOf
Se the specific entity's identifier
setSpecificEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.SpecializationOf
Mutator for the entity that is a specialization of the general entity.
setSpecificEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
setSpecificEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
setStarter(QualifiedName) - Method in interface org.openprovenance.prov.model.WasStartedBy
 
setStarter(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
setStartTime(XMLGregorianCalendar) - Method in interface org.openprovenance.prov.model.Activity
Sets the value of the startTime property.
setStartTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.Activity
 
setSummaryObjectEndText(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the end text to output when an Object is output in summary mode.
setSummaryObjectStartText(String) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets the start text to output when an Object is output in summary mode.
setter(Statement, int, Object) - Method in class org.openprovenance.prov.model.ProvUtilities
 
setTime(XMLGregorianCalendar) - Method in interface org.openprovenance.prov.model.HasTime
Set time instant
setTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.Used
Set time instant
setTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
Set time instant
setTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
Set time instant
setTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
Set time instant
setTime(XMLGregorianCalendar) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
Set time instant
setTrigger(QualifiedName) - Method in interface org.openprovenance.prov.model.WasEndedBy
 
setTrigger(QualifiedName) - Method in interface org.openprovenance.prov.model.WasStartedBy
 
setTrigger(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
setTrigger(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
setTrimmerMatcher(StrMatcher) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Sets the matcher for characters to trim.
setType(QualifiedName) - Method in interface org.openprovenance.prov.model.TypedValue
Sets the value of the type property.
setType(QualifiedName) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
setUpToClass(Class) - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Sets the last super class to stop appending fields for.
setUri(String) - Method in interface org.openprovenance.prov.model.QualifiedName
 
setUri(String) - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
setUsage(QualifiedName) - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
setUsage(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setUseClassName(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether to use the class name.
setUsedEntity(QualifiedName) - Method in interface org.openprovenance.prov.model.WasDerivedFrom
 
setUsedEntity(QualifiedName) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
setUseFieldNames(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether to use the field names passed in.
setUseIdentityHashCode(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether to use the identity hash code.
setUseShortClassName(boolean) - Method in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Sets whether to output short or long class names.
setValue(String) - Method in interface org.openprovenance.prov.model.LangString
Sets the value of the value property.
setValue(String) - Method in interface org.openprovenance.prov.model.TypedValue
Sets the value property.
setValue(String) - Method in class org.openprovenance.prov.vanilla.LangString
 
setValue(String) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
setValue(LangString) - Method in interface org.openprovenance.prov.model.TypedValue
Sets the value property.
setValue(LangString) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
setValue(QualifiedName) - Method in interface org.openprovenance.prov.model.TypedValue
Sets the value property.
setValue(QualifiedName) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
setValue(Value) - Method in interface org.openprovenance.prov.model.HasValue
 
setValue(Value) - Method in class org.openprovenance.prov.vanilla.Entity
 
setValueFromObject(Object) - Method in interface org.openprovenance.prov.model.TypedValue
Sets the value of the value property.
setValueFromObject(Object) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
SHARED_PROV_TOOLBOX_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
SHORT_MINUS_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Short constant for minus one.
SHORT_ONE - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Short constant for one.
SHORT_PREFIX_STYLE - Static variable in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
The short prefix toString style.
SHORT_ZERO - Static variable in class org.openprovenance.apache.commons.lang.math.NumberUtils
Reusable Short constant for zero.
SIMPLE_STYLE - Static variable in class org.openprovenance.apache.commons.lang.builder.ToStringStyle
The simple toString style.
singleQuoteMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns a matcher which matches the single quote character.
size - Variable in class org.openprovenance.apache.commons.lang.text.StrBuilder
Current size of the buffer.
size() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets the length of the string builder.
size() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the number of tokens found in the String.
spaceMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns a matcher which matches the space character.
SpecializationOf - Class in org.openprovenance.prov.vanilla
 
SpecializationOf - Interface in org.openprovenance.prov.model
Interface for PROV Specialization association.
SpecializationOf(QualifiedName, QualifiedName) - Constructor for class org.openprovenance.prov.vanilla.SpecializationOf
 
specific - Variable in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
specificEntity - Variable in class org.openprovenance.prov.vanilla.SpecializationOf
 
split(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, using whitespace as the separator.
split(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separator specified.
split(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separators specified.
split(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array with a maximum length, separators specified.
splitByCharacterType(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits a String by Character type as returned by java.lang.Character.getType(char).
splitByCharacterTypeCamelCase(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits a String by Character type as returned by java.lang.Character.getType(char).
splitByWholeSeparator(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separator string specified.
splitByWholeSeparator(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separator string specified.
splitByWholeSeparatorPreserveAllTokens(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separator string specified.
splitByWholeSeparatorPreserveAllTokens(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separator string specified.
splitMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Matches the same characters as StringTokenizer, namely space, tab, newline and formfeed.
splitPreserveAllTokens(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, using whitespace as the separator, preserving all tokens, including empty tokens created by adjacent separators.
splitPreserveAllTokens(String, char) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separator specified, preserving all tokens, including empty tokens created by adjacent separators.
splitPreserveAllTokens(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array, separators specified, preserving all tokens, including empty tokens created by adjacent separators.
splitPreserveAllTokens(String, String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Splits the provided text into an array with a maximum length, separators specified, preserving all tokens, including empty tokens created by adjacent separators.
squeeze(String, String) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Squeezes any repetitions of a character that is mentioned in the supplied set.
squeeze(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Squeezes any repetitions of a character that is mentioned in the supplied set.
START_ESCAPE - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
startBundle(QualifiedName, Namespace) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
startBundle(QualifiedName, Namespace) - Method in class org.openprovenance.prov.model.ProvFactory
 
startBundle(QualifiedName, Namespace) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
startDocument(Namespace) - Method in interface org.openprovenance.prov.model.ModelConstructor
 
startDocument(Namespace) - Method in class org.openprovenance.prov.model.ProvFactory
 
startDocument(Namespace) - Method in class org.openprovenance.prov.vanilla.ModelConstructor
 
starter - Variable in class org.openprovenance.prov.vanilla.WasStartedBy
 
startsWith(String) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Checks whether this builder starts with the specified string.
startsWith(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Check if a String starts with a specified prefix.
startsWithAny(String, String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Check if a String starts with any of an array of specified strings.
startsWithIgnoreCase(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Case insensitive check if a String starts with a specified prefix.
Statement - Interface in org.openprovenance.prov.model
Interface for a PROV unit of description
StatementAction - Interface in org.openprovenance.prov.model
Interface to a visitor like functionality operating over PROV statements and bundles.
StatementActionValue - Interface in org.openprovenance.prov.model
Interface to a visitor like functionality operating over PROV statements and bundles.
StatementOrBundle - Interface in org.openprovenance.prov.model
Interface for a PROV Statement (Statement) (a unit of provenance description) or a Bundle (Bundle) (a named set of provenance statements)
StatementOrBundle.Kind - Enum in org.openprovenance.prov.model
Enumerated type for each type of provenance statement or bundle.
StrBuilder - Class in org.openprovenance.apache.commons.lang.text
Builds a string from constituent parts providing a more flexible and powerful API than StringBuffer.
StrBuilder() - Constructor for class org.openprovenance.apache.commons.lang.text.StrBuilder
Constructor that creates an empty builder initial capacity 32 characters.
StrBuilder(int) - Constructor for class org.openprovenance.apache.commons.lang.text.StrBuilder
Constructor that creates an empty builder the specified initial capacity.
StrBuilder(String) - Constructor for class org.openprovenance.apache.commons.lang.text.StrBuilder
Constructor that creates a builder from the string, allocating 32 extra characters for growth.
STRICT - org.openprovenance.prov.model.ProvUtilities.BuildFlag
 
StringEscapeUtils - Class in org.openprovenance.apache.commons.lang
Escapes and unescapes Strings for Java, Java Script, HTML, XML, and SQL.
StringEscapeUtils() - Constructor for class org.openprovenance.apache.commons.lang.StringEscapeUtils
StringEscapeUtils instances should NOT be constructed in standard programming.
stringMatcher(String) - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Constructor that creates a matcher from a string.
stringToInt(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Deprecated.
Use NumberUtils.toInt(String) This method will be removed in Commons Lang 3.0
stringToInt(String, int) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Deprecated.
Use NumberUtils.toInt(String, int) This method will be removed in Commons Lang 3.0
stringToQualifiedName(String, ProvFactory) - Method in class org.openprovenance.prov.model.Namespace
 
stringToQualifiedName(String, ProvFactory, boolean) - Method in class org.openprovenance.prov.model.Namespace
 
stringToQualifiedName(String, Element) - Method in class org.openprovenance.prov.model.DOMProcessing
Converts a string to a QualifiedName, extracting namespace from the DOM.
StringUtils - Class in org.openprovenance.apache.commons.lang
Operations on String that are null safe.
StringUtils() - Constructor for class org.openprovenance.apache.commons.lang.StringUtils
StringUtils instances should NOT be constructed in standard programming.
strip(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips whitespace from the start and end of a String.
strip(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips any of a set of characters from the start and end of a String.
stripAll(String[]) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips whitespace from the start and end of every String in an array.
stripAll(String[], String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips any of a set of characters from the start and end of every String in an array.
stripEnd(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips any of a set of characters from the end of a String.
stripStart(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips any of a set of characters from the start of a String.
stripToEmpty(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips whitespace from the start and end of a String returning an empty String if null input.
stripToNull(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Strips whitespace from the start and end of a String returning null if the String is empty ("") after the strip.
StrMatcher - Class in org.openprovenance.apache.commons.lang.text
A matcher class that can be queried to determine if a character array portion matches.
StrMatcher() - Constructor for class org.openprovenance.apache.commons.lang.text.StrMatcher
Constructor.
StrTokenizer - Class in org.openprovenance.apache.commons.lang.text
Tokenizes a string based based on delimiters (separators) and supporting quoting and ignored character concepts.
StrTokenizer() - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on space, tab, newline and formfeed as per StringTokenizer, but with no text to tokenize.
StrTokenizer(char[]) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on space, tab, newline and formfeed as per StringTokenizer.
StrTokenizer(char[], char) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on the specified character.
StrTokenizer(char[], char, char) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on the specified delimiter character and handling quotes using the specified quote character.
StrTokenizer(char[], String) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on the specified string.
StrTokenizer(char[], StrMatcher) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting using the specified delimiter matcher.
StrTokenizer(char[], StrMatcher, StrMatcher) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting using the specified delimiter matcher and handling quotes using the specified quote matcher.
StrTokenizer(String) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on space, tab, newline and formfeed as per StringTokenizer.
StrTokenizer(String, char) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on the specified delimiter character.
StrTokenizer(String, char, char) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on the specified delimiter character and handling quotes using the specified quote character.
StrTokenizer(String, String) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting on the specified delimiter string.
StrTokenizer(String, StrMatcher) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting using the specified delimiter matcher.
StrTokenizer(String, StrMatcher, StrMatcher) - Constructor for class org.openprovenance.apache.commons.lang.text.StrTokenizer
Constructs a tokenizer splitting using the specified delimiter matcher and handling quotes using the specified quote matcher.
subarray(boolean[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new boolean array containing the elements between the start and end indices.
subarray(byte[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new byte array containing the elements between the start and end indices.
subarray(char[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new char array containing the elements between the start and end indices.
subarray(double[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new double array containing the elements between the start and end indices.
subarray(float[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new float array containing the elements between the start and end indices.
subarray(int[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new int array containing the elements between the start and end indices.
subarray(long[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new long array containing the elements between the start and end indices.
subarray(short[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new short array containing the elements between the start and end indices.
subarray(Object[], int, int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Produces a new array containing the elements between the start and end indices.
substring(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Extracts a portion of this string builder as a string.
substring(int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Extracts a portion of this string builder as a string.
substring(String, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets a substring from the specified String avoiding exceptions.
substring(String, int, int) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets a substring from the specified String avoiding exceptions.
substringAfter(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the substring after the first occurrence of a separator.
substringAfterLast(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the substring after the last occurrence of a separator.
substringBefore(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the substring before the first occurrence of a separator.
substringBeforeLast(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the substring before the last occurrence of a separator.
substringBetween(String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the String that is nested in between two instances of the same String.
substringBetween(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Gets the String that is nested in between two Strings.
substringsBetween(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Searches a String for substrings delimited by a start and end tag, returning all matching substrings in an array.
SUMMARY_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
SUMMARY_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
SVG - org.openprovenance.prov.interop.Formats.ProvFormat
 
swapCase(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Swaps the case of a String changing upper and title case to lower case, and lower case to upper case.
swapCase(String) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Swaps the case of a String using a word based algorithm.
SystemUtils - Class in org.openprovenance.apache.commons.lang
Helpers for java.lang.System.
SystemUtils() - Constructor for class org.openprovenance.apache.commons.lang.SystemUtils
SystemUtils instances should NOT be constructed in standard programming.

T

tabMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Returns a matcher which matches the tab character.
toBoolean(int) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an int to a boolean using the convention that zero is false.
toBoolean(int, int, int) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an int to a boolean specifying the conversion values.
toBoolean(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a boolean handling null by returning false.
toBoolean(Integer, Integer, Integer) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an Integer to a boolean specifying the conversion values.
toBoolean(String) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a String to a boolean (optimised for performance).
toBoolean(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a String to a Boolean throwing an exception if no match found.
toBooleanDefaultIfNull(Boolean, boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a boolean handling null.
toBooleanObject(boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Boolean factory that avoids creating new Boolean objecs all the time.
toBooleanObject(int) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an int to a Boolean using the convention that zero is false.
toBooleanObject(int, int, int, int) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an int to a Boolean specifying the conversion values.
toBooleanObject(Integer) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an Integer to a Boolean using the convention that zero is false.
toBooleanObject(Integer, Integer, Integer, Integer) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts an Integer to a Boolean specifying the conversion values.
toBooleanObject(String) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a String to a Boolean.
toBooleanObject(String, String, String, String) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a String to a Boolean throwing an exception if no match.
toByte(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a byte, returning zero if the conversion fails.
toByte(String, byte) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a byte, returning a default value if the conversion fails.
toChar(Character) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the Character to a char throwing an exception for null.
toChar(Character, char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the Character to a char handling null.
toChar(String) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the String to a char using the first character, throwing an exception on empty Strings.
toChar(String, char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the String to a char using the first character, defaulting the value on empty Strings.
toCharacterObject(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to a Character.
toCharacterObject(String) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the String to a Character using the first character, returning null for empty Strings.
toCharArray() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Copies the builder's character array into a new character array.
toCharArray(int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Copies part of the builder's character array into a new character array.
toClass(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Converts an array of Object in to an array of Class objects.
toDate(XMLGregorianCalendar) - Static method in class org.openprovenance.prov.model.ProvUtilities
 
toDocument() - Method in class org.openprovenance.prov.model.IndexedDocument
 
toDouble(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a double, returning 0.0d if the conversion fails.
toDouble(String, double) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a double, returning a default value if the conversion fails.
toFloat(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a float, returning 0.0f if the conversion fails.
toFloat(String, float) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a float, returning a default value if the conversion fails.
toHashCode() - Method in class org.openprovenance.apache.commons.lang.builder.HashCodeBuilder
Return the computed hashCode.
toInt(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to an int, returning zero if the conversion fails.
toInt(String, int) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to an int, returning a default value if the conversion fails.
toInteger(boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to an int using the convention that zero is false.
toInteger(boolean, int, int) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to an int specifying the conversion values.
toInteger(Boolean, int, int, int) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to an int specifying the conversion values.
toIntegerObject(boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to an Integer using the convention that zero is false.
toIntegerObject(boolean, Integer, Integer) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to an Integer specifying the conversion values.
toIntegerObject(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a Integer using the convention that zero is false.
toIntegerObject(Boolean, Integer, Integer, Integer) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to an Integer specifying the conversion values.
toIntValue(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to the Integer it represents, throwing an exception if the character is not numeric.
toIntValue(char, int) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to the Integer it represents, throwing an exception if the character is not numeric.
toIntValue(Character) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to the Integer it represents, throwing an exception if the character is not numeric.
toIntValue(Character, int) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to the Integer it represents, throwing an exception if the character is not numeric.
tokenize(char[], int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Internal method to performs the tokenization.
toLong(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a long, returning zero if the conversion fails.
toLong(String, long) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a long, returning a default value if the conversion fails.
toMap(Object[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts the given array into a Map.
toNotationString() - Method in interface org.openprovenance.prov.model.Attribute
A method to generate the prov-n representation of an attribute ex:attr="value" %% xsd:type
toNotationString() - Method in class org.openprovenance.prov.vanilla.Label
 
toNotationString() - Method in class org.openprovenance.prov.vanilla.Location
 
toNotationString() - Method in class org.openprovenance.prov.vanilla.Other
 
toNotationString() - Method in class org.openprovenance.prov.vanilla.Role
 
toNotationString() - Method in class org.openprovenance.prov.vanilla.Type
 
toNotationString() - Method in class org.openprovenance.prov.vanilla.Value
 
toObject(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive booleans to objects.
toObject(byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive bytes to objects.
toObject(char[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive chars to objects.
toObject(double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive doubles to objects.
toObject(float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive floats to objects.
toObject(int[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive ints to objects.
toObject(long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive longs to objects.
toObject(short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of primitive shorts to objects.
TOOLBOX_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
TOOLBOX_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
toolboxVersion - Static variable in class org.openprovenance.prov.configuration.Configuration
 
topDown - Static variable in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Whether to print the stack trace top-down.
toPrimitive(Boolean[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Booleans to primitives.
toPrimitive(Boolean[], boolean) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Booleans to primitives handling null.
toPrimitive(Byte[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Bytes to primitives.
toPrimitive(Byte[], byte) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Bytes to primitives handling null.
toPrimitive(Character[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Characters to primitives.
toPrimitive(Character[], char) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Character to primitives handling null.
toPrimitive(Double[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Doubles to primitives.
toPrimitive(Double[], double) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Doubles to primitives handling null.
toPrimitive(Float[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Floats to primitives.
toPrimitive(Float[], float) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Floats to primitives handling null.
toPrimitive(Integer[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Integers to primitives.
toPrimitive(Integer[], int) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Integer to primitives handling null.
toPrimitive(Long[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Longs to primitives.
toPrimitive(Long[], long) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Long to primitives handling null.
toPrimitive(Short[]) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Shorts to primitives.
toPrimitive(Short[], short) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Converts an array of object Short to primitives handling null.
toQName() - Method in interface org.openprovenance.prov.model.QualifiedName
Converts this QualifiedName to a valid xsd:QName by unescaping \-characters in the local names, and _-encoding the local name.
toQName() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
toShort(String) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to a short, returning zero if the conversion fails.
toShort(String, short) - Static method in class org.openprovenance.apache.commons.lang.math.NumberUtils
Convert a String to an short, returning a default value if the conversion fails.
toString() - Method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Gets the String built by this builder.
toString() - Method in class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Returns the built toString.
toString() - Method in class org.openprovenance.apache.commons.lang.CharRange
Gets a string representation of the character range.
toString() - Method in class org.openprovenance.apache.commons.lang.CharSet
Gets a string representation of the set.
toString() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets a String version of the string builder, creating a new instance each time the method is called.
toString() - Method in class org.openprovenance.apache.commons.lang.text.StrTokenizer
Gets the String content that the tokenizer is parsing.
toString() - Method in class org.openprovenance.prov.model.Namespace
 
toString() - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
toString() - Method in class org.openprovenance.prov.vanilla.Activity
 
toString() - Method in class org.openprovenance.prov.vanilla.Agent
 
toString() - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
toString() - Method in class org.openprovenance.prov.vanilla.Bundle
 
toString() - Method in class org.openprovenance.prov.vanilla.Document
 
toString() - Method in class org.openprovenance.prov.vanilla.Entity
 
toString() - Method in class org.openprovenance.prov.vanilla.HadMember
 
toString() - Method in class org.openprovenance.prov.vanilla.LangString
 
toString() - Method in class org.openprovenance.prov.vanilla.Other
 
toString() - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
toString() - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
toString() - Method in class org.openprovenance.prov.vanilla.QualifiedName
 
toString() - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
toString() - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
toString() - Method in class org.openprovenance.prov.vanilla.TypedValue
 
toString() - Method in class org.openprovenance.prov.vanilla.Used
 
toString() - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
toString() - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
toString() - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
toString() - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
toString() - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
toString() - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
toString() - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
toString() - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
toString() - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
toString(boolean, String, String) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to a String returning one of the input Strings.
toString(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to a String that contains the one character.
toString(Boolean, String, String, String) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a String returning one of the input Strings.
toString(Character) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the character to a String that contains the one character.
toString(Object) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Outputs an array as a String, treating null as an empty array.
toString(Object) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a toString value using the default ToStringStyle through reflection.
toString(Object) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Gets the toString of an Object returning an empty string ("") if null input.
toString(Object, String) - Static method in class org.openprovenance.apache.commons.lang.ArrayUtils
Outputs an array as a String handling nulls.
toString(Object, String) - Static method in class org.openprovenance.apache.commons.lang.ObjectUtils
Gets the toString of an Object returning a specified text if null input.
toString(Object, ToStringStyle) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a toString value through reflection.
toString(Object, ToStringStyle, boolean) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a toString value through reflection.
toString(Object, ToStringStyle, boolean, boolean) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a toString value through reflection.
toString(Object, ToStringStyle, boolean, boolean, Class) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a toString value through reflection.
toString(Object, ToStringStyle, boolean, Class) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
toString(ToStringBuilder) - Method in interface org.openprovenance.apache.commons.lang.builder.ToString
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.ActedOnBehalfOf
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Activity
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Agent
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.AlternateOf
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Bundle
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Document
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Entity
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.HadMember
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.LangString
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Other
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedAlternateOf
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedHadMember
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.QualifiedSpecializationOf
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.SpecializationOf
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.TypedValue
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.Used
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasAssociatedWith
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasAttributedTo
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasEndedBy
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasGeneratedBy
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasInfluencedBy
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasInformedBy
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
toString(ToStringBuilder) - Method in class org.openprovenance.prov.vanilla.WasStartedBy
 
ToString - Interface in org.openprovenance.apache.commons.lang.builder
 
toStringBuffer() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Gets a StringBuffer version of the string builder, creating a new instance each time the method is called.
ToStringBuilder - Class in org.openprovenance.apache.commons.lang.builder
Assists in implementing Object.toString() methods.
ToStringBuilder(Object) - Constructor for class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Constructs a builder for the specified object using the default output style.
ToStringBuilder(Object, ToStringStyle) - Constructor for class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Constructs a builder for the specified object using the a defined output style.
ToStringBuilder(Object, ToStringStyle, StringBuffer) - Constructor for class org.openprovenance.apache.commons.lang.builder.ToStringBuilder
Constructs a builder for the specified object.
toStringExclude(Object, String) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a String for a toString method excluding the given field name.
toStringExclude(Object, String[]) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a String for a toString method excluding the given field names.
toStringExclude(Object, Collection) - Static method in class org.openprovenance.apache.commons.lang.builder.ReflectionToStringBuilder
Builds a String for a toString method excluding the given field names.
toStringOnOff(boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to a String returning 'on' or 'off'.
toStringOnOff(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a String returning 'on', 'off', or null.
ToStringStyle - Class in org.openprovenance.apache.commons.lang.builder
Controls String formatting for ToStringBuilder.
ToStringStyle() - Constructor for class org.openprovenance.apache.commons.lang.builder.ToStringStyle
Constructor.
toStringTrueFalse(boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to a String returning 'true' or 'false'.
toStringTrueFalse(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a String returning 'true', 'false', or null.
toStringYesNo(boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a boolean to a String returning 'yes' or 'no'.
toStringYesNo(Boolean) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Converts a Boolean to a String returning 'yes', 'no', or null.
toXMLGregorianCalendar(Date) - Static method in class org.openprovenance.prov.model.ProvUtilities
 
translate(String, String, String) - Static method in class org.openprovenance.apache.commons.lang.CharSetUtils
Deprecated.
Use StringUtils.replaceChars(String, String, String). Method will be removed in Commons Lang 3.0. NOTE: StringUtils#replaceChars behaves differently when 'searchChars' is longer than 'replaceChars'. CharSetUtils#translate will use the last char of the replacement string whereas StringUtils#replaceChars will delete
traverseAttributions2(Set<Pair<QualifiedName, WasAttributedTo>>, Set<QualifiedName>, Stack<QualifiedName>) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseAttributionsWithRelations(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseDerivations(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseDerivations1(Set<QualifiedName>, Set<QualifiedName>, Stack<QualifiedName>) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseDerivations2(Set<Pair<QualifiedName, WasDerivedFrom>>, Set<QualifiedName>, Stack<QualifiedName>) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseDerivationsWithRelations(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseMembership2(Set<Pair<QualifiedName, HadMember>>, Set<QualifiedName>, Stack<QualifiedName>) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseMembershipsWithRelations(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseReverseMembership2(Set<Pair<QualifiedName, HadMember>>, Set<QualifiedName>, Stack<QualifiedName>) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseReverseMembershipsWithRelations(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseSpecializations2(Set<Pair<QualifiedName, SpecializationOf>>, Set<QualifiedName>, Stack<QualifiedName>) - Method in class org.openprovenance.prov.model.IndexedDocument
 
traverseSpecializationsWithRelations(QualifiedName) - Method in class org.openprovenance.prov.model.IndexedDocument
 
TRIG - org.openprovenance.prov.interop.Formats.ProvFormat
 
trigger - Variable in class org.openprovenance.prov.vanilla.WasEndedBy
 
trigger - Variable in class org.openprovenance.prov.vanilla.WasStartedBy
 
trim() - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Trims the builder by removing characters less than or equal to a space from the beginning and end.
trim(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes control characters (char <= 32) from both ends of this String, handling null by returning null.
trimMatcher() - Static method in class org.openprovenance.apache.commons.lang.text.StrMatcher
Matches the String trim() whitespace characters.
trimNode(Node) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
trimStackFrames - Static variable in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Whether to trim the repeated stack trace.
trimStackFrames(List) - Method in class org.openprovenance.apache.commons.lang.exception.NestableDelegate
Trims the stack frames.
trimToEmpty(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes control characters (char <= 32) from both ends of this String returning an empty String ("") if the String is empty ("") after the trim or if it is null.
trimToNull(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Removes control characters (char <= 32) from both ends of this String returning null if the String is empty ("") after the trim or if it is null.
TURTLE - org.openprovenance.prov.interop.Formats.ProvFormat
 
type - Variable in class org.openprovenance.prov.vanilla.TypedValue
 
Type - Class in org.openprovenance.prov.vanilla
 
Type - Interface in org.openprovenance.prov.model
Interface for PROV Type attribute.
Type(QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.Type
 
TypedValue - Class in org.openprovenance.prov.vanilla
 
TypedValue - Interface in org.openprovenance.prov.model
Interface for a PROV value.
TypedValue() - Constructor for class org.openprovenance.prov.vanilla.TypedValue
 
TypedValue(QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.TypedValue
 
TypedValue(QualifiedName, Object, Object, Object) - Constructor for class org.openprovenance.prov.vanilla.TypedValue
 

U

uncapitalise(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Deprecated.
Use the standardly named StringUtils.uncapitalize(String). Method will be removed in Commons Lang 3.0.
uncapitalize(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Uncapitalizes a String changing the first letter to title case as per Character.toLowerCase(char).
uncapitalize(String) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Uncapitalizes all the whitespace separated words in a String.
uncapitalize(String, char[]) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Uncapitalizes all the whitespace separated words in a String.
UncheckedException - Exception in org.openprovenance.prov.model.exception
A generic unchecked exception.
UncheckedException(Exception) - Constructor for exception org.openprovenance.prov.model.exception.UncheckedException
 
UncheckedException(String, Exception) - Constructor for exception org.openprovenance.prov.model.exception.UncheckedException
 
unescape(String) - Static method in class org.openprovenance.prov.model.ProvUtilities
 
UNESCAPE_FROM_XML_QNAME_LOCAL_NAME - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
UNESCAPE_PROV_LOCAL_NAME - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
UNESCAPE_UNICODE - Static variable in class org.openprovenance.prov.model.QualifiedNameUtils
 
unescapeCsv(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Returns a String value for an unescaped CSV column.
unescapeCsv(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Returns a String value for an unescaped CSV column.
unescapeFromXsdLocalName(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
unescapeHtml(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes a string containing generalEntity escapes to a string containing the actual Unicode characters corresponding to the escapes.
unescapeHtml(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes a string containing generalEntity escapes to a string containing the actual Unicode characters corresponding to the escapes.
unescapeJava(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes any Java literals found in the String to a Writer.
unescapeJava(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes any Java literals found in the String.
unescapeJavaScript(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes any JavaScript literals found in the String to a Writer.
unescapeJavaScript(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes any JavaScript literals found in the String.
unescapeProvLocalName(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
unescapeUnicode(String) - Method in class org.openprovenance.prov.model.QualifiedNameUtils
 
unescapeXml(Writer, String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes a string containing XML generalEntity escapes to a string containing the actual Unicode characters corresponding to the escapes.
unescapeXml(String) - Static method in class org.openprovenance.apache.commons.lang.StringEscapeUtils
Unescapes a string containing XML generalEntity escapes to a string containing the actual Unicode characters corresponding to the escapes.
UnhandledException - Exception in org.openprovenance.apache.commons.lang
Thrown when it is impossible or undesirable to consume or throw a checked exception.
UnhandledException(String, Throwable) - Constructor for exception org.openprovenance.apache.commons.lang.UnhandledException
Constructs the exception using a message and cause.
UnhandledException(Throwable) - Constructor for exception org.openprovenance.apache.commons.lang.UnhandledException
Constructs the exception using a cause.
unicodeEscaped(char) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the string to the unicode format ' '.
unicodeEscaped(Character) - Static method in class org.openprovenance.apache.commons.lang.CharUtils
Converts the string to the unicode format ' '.
unmarshallAttribute(Element, ProvFactory, ValueConverter) - Method in class org.openprovenance.prov.model.DOMProcessing
 
UnqualifiedRelation - Interface in org.openprovenance.prov.model
 
unregister(String, String) - Method in class org.openprovenance.prov.model.Namespace
 
unregisterDeafult(String) - Method in class org.openprovenance.prov.model.Namespace
 
updateNamespaces(Document) - Method in class org.openprovenance.prov.model.ProvUtilities
After reading/constructing a document, this method should be called to ensure that Namespaces are properly chained.
upperCase(String) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Converts a String to upper case as per String.toUpperCase().
upperCase(String, Locale) - Static method in class org.openprovenance.apache.commons.lang.StringUtils
Converts a String to upper case as per String.toUpperCase(Locale).
usage - Variable in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
Used - Class in org.openprovenance.prov.vanilla
 
Used - Interface in org.openprovenance.prov.model
Interface for PROV Usage association.
Used(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.Used
 
Used(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.Used
 
Used(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.Used
 
usedEntity - Variable in class org.openprovenance.prov.vanilla.WasDerivedFrom
 
USER_COUNTRY - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The user.country or user.region System Property.
USER_DIR - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The user.dir System Property.
USER_HOME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The user.home System Property.
USER_LANGUAGE - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The user.language System Property.
USER_NAME - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The user.name System Property.
USER_TIMEZONE - Static variable in class org.openprovenance.apache.commons.lang.SystemUtils
The user.timezone System Property.

V

validateIndex(int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Validates parameters defining a single index in the builder.
validateRange(int, int) - Method in class org.openprovenance.apache.commons.lang.text.StrBuilder
Validates parameters defining a range of the builder.
value - Variable in class org.openprovenance.prov.vanilla.TypedValue
 
Value - Class in org.openprovenance.prov.vanilla
 
Value - Interface in org.openprovenance.prov.model
Interface for PROV attribute value.
Value(QualifiedName, Object) - Constructor for class org.openprovenance.prov.vanilla.Value
 
valueAsJavaObject - Variable in class org.openprovenance.prov.vanilla.TypedValue
 
ValueConverter - Class in org.openprovenance.prov.model
Conversion from String to Object and vice-versa for common xsd types.
ValueConverter(ProvFactory) - Constructor for class org.openprovenance.prov.model.ValueConverter
 
valueOf(String) - Static method in enum org.openprovenance.prov.interop.Formats.ProvFormat
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.openprovenance.prov.interop.Formats.ProvFormatType
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.openprovenance.prov.model.Attribute.AttributeKind
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.openprovenance.prov.model.ProvUtilities.BuildFlag
Returns the enum constant of this type with the specified name.
valueOf(String) - Static method in enum org.openprovenance.prov.model.StatementOrBundle.Kind
Returns the enum constant of this type with the specified name.
values() - Static method in enum org.openprovenance.prov.interop.Formats.ProvFormat
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.openprovenance.prov.interop.Formats.ProvFormatType
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.openprovenance.prov.model.Attribute.AttributeKind
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.openprovenance.prov.model.ProvUtilities.BuildFlag
Returns an array containing the constants of this enum type, in the order they are declared.
values() - Static method in enum org.openprovenance.prov.model.StatementOrBundle.Kind
Returns an array containing the constants of this enum type, in the order they are declared.
valueToNotationString(Object, QualifiedName) - Static method in class org.openprovenance.prov.model.ProvUtilities
 
valueToNotationString(Key) - Static method in class org.openprovenance.prov.model.ProvUtilities
 

W

WARN - org.openprovenance.prov.model.ProvUtilities.BuildFlag
 
WasAssociatedWith - Class in org.openprovenance.prov.vanilla
 
WasAssociatedWith - Interface in org.openprovenance.prov.model
Interface for the PROV Association association.
WasAssociatedWith(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasAssociatedWith
 
WasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasAssociatedWith
 
WasAssociatedWith(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasAssociatedWith
 
WasAttributedTo - Class in org.openprovenance.prov.vanilla
 
WasAttributedTo - Interface in org.openprovenance.prov.model
Interface for the PROV Attribution association.
WasAttributedTo(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasAttributedTo
 
WasAttributedTo(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasAttributedTo
 
WasDerivedFrom - Class in org.openprovenance.prov.vanilla
 
WasDerivedFrom - Interface in org.openprovenance.prov.model
Interface for PROV Derivation association.
WasDerivedFrom(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasDerivedFrom
 
WasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasDerivedFrom
 
WasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasDerivedFrom
 
WasDerivedFrom(QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasDerivedFrom
 
WasEndedBy - Class in org.openprovenance.prov.vanilla
 
WasEndedBy - Interface in org.openprovenance.prov.model
Interface for PROV End association.
WasEndedBy(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasEndedBy
 
WasEndedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasEndedBy
 
WasGeneratedBy - Class in org.openprovenance.prov.vanilla
 
WasGeneratedBy - Interface in org.openprovenance.prov.model
Interface for PROV Generation association.
WasGeneratedBy(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasGeneratedBy
 
WasGeneratedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasGeneratedBy
 
WasGeneratedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasGeneratedBy
 
WasInfluencedBy - Class in org.openprovenance.prov.vanilla
 
WasInfluencedBy - Interface in org.openprovenance.prov.model
Interface for the PROV Influence association.
WasInfluencedBy(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInfluencedBy
 
WasInfluencedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInfluencedBy
 
WasInformedBy - Class in org.openprovenance.prov.vanilla
 
WasInformedBy - Interface in org.openprovenance.prov.model
Interface for the PROV Communication association.
WasInformedBy(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInformedBy
 
WasInformedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInformedBy
 
WasInvalidatedBy - Class in org.openprovenance.prov.vanilla
 
WasInvalidatedBy - Interface in org.openprovenance.prov.model
Interface for PROV Invalidation association.
WasInvalidatedBy(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
WasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
WasInvalidatedBy(QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasInvalidatedBy
 
WasStartedBy - Class in org.openprovenance.prov.vanilla
 
WasStartedBy - Interface in org.openprovenance.prov.model
Interface for PROV Start association.
WasStartedBy(QualifiedName, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasStartedBy
 
WasStartedBy(QualifiedName, QualifiedName, QualifiedName, QualifiedName, XMLGregorianCalendar, Collection<Attribute>) - Constructor for class org.openprovenance.prov.vanilla.WasStartedBy
 
withThreadNamespace(Namespace) - Static method in class org.openprovenance.prov.model.Namespace
 
WordUtils - Class in org.openprovenance.apache.commons.lang
Operations on Strings that contain words.
WordUtils() - Constructor for class org.openprovenance.apache.commons.lang.WordUtils
WordUtils instances should NOT be constructed in standard programming.
wrap(String, int) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Wraps a single line of text, identifying words by ' '.
wrap(String, int, String, boolean) - Static method in class org.openprovenance.apache.commons.lang.WordUtils
Wraps a single line of text, identifying words by ' '.
wrappersToPrimitives(Class[]) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Converts the specified array of wrapper Class objects to an array of its corresponding primitive Class objects.
wrapperToPrimitive(Class) - Static method in class org.openprovenance.apache.commons.lang.ClassUtils
Converts the specified wrapper class to its corresponding primitive class.
writeDOMToPrinter(Node, Writer, boolean) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
writeDOMToPrinter(Node, StreamResult, boolean) - Static method in class org.openprovenance.prov.model.DOMProcessing
 
writeToString(Node) - Static method in class org.openprovenance.prov.model.DOMProcessing
 

X

XML - org.openprovenance.prov.interop.Formats.ProvFormat
 
XML_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
xmlns - Static variable in class org.openprovenance.prov.model.Namespace
 
xor(boolean[]) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Performs an xor on a set of booleans.
xor(Boolean[]) - Static method in class org.openprovenance.apache.commons.lang.BooleanUtils
Performs an xor on an array of Booleans.
XSD_ANY_URI - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:anyURI
XSD_BASE64_BINARY - Variable in class org.openprovenance.prov.model.Name
 
XSD_BOOLEAN - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:boolean
XSD_BYTE - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:byte
XSD_DATE - Variable in class org.openprovenance.prov.model.Name
 
XSD_DATETIME - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:dateTime
XSD_DATETIMESTAMP - Variable in class org.openprovenance.prov.model.Name
 
XSD_DAY_TIME_DURATION - Variable in class org.openprovenance.prov.model.Name
 
XSD_DECIMAL - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:decimal
XSD_DOUBLE - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:double
XSD_DURATION - Variable in class org.openprovenance.prov.model.Name
 
XSD_FLOAT - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:float
XSD_GDAY - Variable in class org.openprovenance.prov.model.Name
 
XSD_GMONTH - Variable in class org.openprovenance.prov.model.Name
 
XSD_GMONTH_DAY - Variable in class org.openprovenance.prov.model.Name
 
XSD_GYEAR - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:gYear
XSD_GYEAR_MONTH - Variable in class org.openprovenance.prov.model.Name
 
XSD_HEX_BINARY - Variable in class org.openprovenance.prov.model.Name
 
XSD_INT - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:int
XSD_INTEGER - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:integer
XSD_LANGUAGE - Variable in class org.openprovenance.prov.model.Name
 
XSD_LONG - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:long
XSD_NAME - Variable in class org.openprovenance.prov.model.Name
 
XSD_NCNAME - Variable in class org.openprovenance.prov.model.Name
 
XSD_NMTOKEN - Variable in class org.openprovenance.prov.model.Name
 
XSD_NON_NEGATIVE_INTEGER - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:nonNegativeInteger
XSD_NON_POSITIVE_INTEGER - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:nonPositiveInteger
XSD_NORMALIZED_STRING - Variable in class org.openprovenance.prov.model.Name
 
XSD_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
XSD_NS_FOR_XML - Static variable in class org.openprovenance.prov.model.DOMProcessing
 
XSD_POSITIVE_INTEGER - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:positiveInteger
XSD_PREFIX - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
XSD_SHORT - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:short
XSD_STRING - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:string
XSD_TIME - Variable in class org.openprovenance.prov.model.Name
 
XSD_TOKEN - Variable in class org.openprovenance.prov.model.Name
 
XSD_UNSIGNED_BYTE - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:unsignedByte
XSD_UNSIGNED_INT - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:unsignedInt
XSD_UNSIGNED_LONG - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:unsignedLong
XSD_UNSIGNED_SHORT - Variable in class org.openprovenance.prov.model.Name
Qualified Name for xsd:unsignedShort
XSD_YEAR_MONTH_DURATION - Variable in class org.openprovenance.prov.model.Name
 
XSI_NS - Static variable in interface org.openprovenance.prov.model.NamespacePrefixMapper
 
A B C D E F G H I J K L M N O P Q R S T U V W X 
All Classes All Packages