Package org.openscience.cdk.graph

package org.openscience.cdk.graph

Related Packages

Package	Description
org.openscience.cdk
org.openscience.cdk.graph.matrix

Class	Description
AllCycles	Compute all simple cycles (rings) in a graph.
AllPairsShortestPaths	Utility to determine the shortest paths between all pairs of atoms in a molecule.
ConnectedComponents	Compute the connected components of an adjacency list.
CycleFinder	Defines a method to find the cycles of a molecule.
Cycles	A utility class for storing and computing the cycles of a chemical graph.
EssentialCycles	Determine the uniquely defined essential cycles of a graph.
GraphUtil	Collection of static utilities for manipulating adjacency list representations stored as a int[][].
GraphUtil.EdgeToBondMap	Utility for storing IBonds indexed by vertex end points.
MinimumCycleBasis	Compute the minimum cycle basis (MCB) of a graph.
PathTools	Tools class with methods for handling molecular graphs.
RelevantCycles	Compute the relevant cycles (CR) of a graph.
ShortestPaths	Find and reconstruct the shortest paths from a given start atom to any other connected atom.
SpanningTree	Spanning tree of a molecule.
TripletShortCycles	Compute the shortest cycles through each vertex triple.