Hierarchy For All Packages

Package Hierarchies:

• org.openscience.cdk,
• org.openscience.cdk.event,
• org.openscience.cdk.formula,
• org.openscience.cdk.protein.data,
• org.openscience.cdk.templates

Class Hierarchy

• java.lang.Object
  • org.openscience.cdk.formula.AdductFormula (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IAdductFormula, java.lang.Iterable<T>)
  • org.openscience.cdk.ChemObject (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IChemObject, java.io.Serializable)
    • org.openscience.cdk.AtomContainer (implements org.openscience.cdk.interfaces.IAtomContainer)
      • org.openscience.cdk.Crystal (implements java.lang.Cloneable, org.openscience.cdk.interfaces.ICrystal, java.io.Serializable)
      • org.openscience.cdk.Monomer (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IMonomer, java.io.Serializable)
        • org.openscience.cdk.AminoAcid (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IAminoAcid, java.io.Serializable)
        • org.openscience.cdk.protein.data.PDBMonomer (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IPDBMonomer)
      • org.openscience.cdk.Polymer (implements org.openscience.cdk.interfaces.IPolymer, java.io.Serializable)
        • org.openscience.cdk.BioPolymer (implements org.openscience.cdk.interfaces.IBioPolymer, java.io.Serializable)
          • org.openscience.cdk.protein.data.PDBPolymer (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IPDBPolymer)
      • org.openscience.cdk.Ring (implements org.openscience.cdk.interfaces.IRing, java.io.Serializable)
      • org.openscience.cdk.Strand (implements org.openscience.cdk.interfaces.IStrand, java.io.Serializable)
    • org.openscience.cdk.AtomContainerLegacy (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IAtomContainer, org.openscience.cdk.interfaces.IChemObjectListener, java.io.Serializable)
    • org.openscience.cdk.AtomContainerSet (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IAtomContainerSet, org.openscience.cdk.interfaces.IChemObjectListener, java.io.Serializable)
      • org.openscience.cdk.RingSet (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IRingSet, java.io.Serializable)
      • org.openscience.cdk.Substance (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IChemObjectListener, org.openscience.cdk.interfaces.ISubstance, java.io.Serializable)
    • org.openscience.cdk.ChemFile (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IChemFile, org.openscience.cdk.interfaces.IChemObjectListener, java.io.Serializable)
    • org.openscience.cdk.ChemModel (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IChemModel, org.openscience.cdk.interfaces.IChemObjectListener, java.io.Serializable)
    • org.openscience.cdk.ChemSequence (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IChemObjectListener, org.openscience.cdk.interfaces.IChemSequence, java.io.Serializable)
    • org.openscience.cdk.ElectronContainer (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IElectronContainer, java.io.Serializable)
      • org.openscience.cdk.Bond (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IBond, java.io.Serializable)
      • org.openscience.cdk.LonePair (implements java.lang.Cloneable, org.openscience.cdk.interfaces.ILonePair, java.io.Serializable)
      • org.openscience.cdk.SingleElectron (implements java.lang.Cloneable, org.openscience.cdk.interfaces.ISingleElectron, java.io.Serializable)
    • org.openscience.cdk.Element (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IElement, java.io.Serializable)
      • org.openscience.cdk.Isotope (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IIsotope, java.io.Serializable)
        • org.openscience.cdk.AtomType (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IAtomType, java.io.Serializable)
          • org.openscience.cdk.Atom (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IAtom, java.io.Serializable)
            • org.openscience.cdk.protein.data.PDBAtom (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IPDBAtom)
            • org.openscience.cdk.PseudoAtom (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IPseudoAtom, java.io.Serializable)
              • org.openscience.cdk.FragmentAtom (implements org.openscience.cdk.interfaces.IFragmentAtom)
    • org.openscience.cdk.Mapping (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IMapping, java.io.Serializable)
    • org.openscience.cdk.protein.data.PDBStructure (implements org.openscience.cdk.interfaces.IPDBStructure)
    • org.openscience.cdk.Reaction (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IReaction, java.io.Serializable)
    • org.openscience.cdk.ReactionSet (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IChemObjectListener, org.openscience.cdk.interfaces.IReactionSet, java.io.Serializable)
      • org.openscience.cdk.ReactionScheme (implements org.openscience.cdk.interfaces.IReactionScheme)
  • org.openscience.cdk.ConformerContainer (implements java.util.List<E>)
  • org.openscience.cdk.DefaultChemObjectBuilder (implements org.openscience.cdk.interfaces.IChemObjectBuilder)
  • java.util.EventObject (implements java.io.Serializable)
    • org.openscience.cdk.event.ChemObjectChangeEvent (implements org.openscience.cdk.interfaces.IChemObjectChangeEvent)
  • org.openscience.cdk.formula.MolecularFormula (implements org.openscience.cdk.interfaces.IMolecularFormula)
  • org.openscience.cdk.formula.MolecularFormulaSet (implements java.lang.Cloneable, org.openscience.cdk.interfaces.IMolecularFormulaSet, java.lang.Iterable<T>)
  • org.openscience.cdk.templates.TestMoleculeFactory