AbstractAmazonOmics (AWS SDK for Java

java.lang.Object
- com.amazonaws.services.omics.AbstractAmazonOmics

All Implemented Interfaces:

AmazonOmics

Direct Known Subclasses:

AbstractAmazonOmicsAsync
```
@Generated(value="com.amazonaws:aws-java-sdk-code-generator")
public class AbstractAmazonOmics
extends Object
implements AmazonOmics
```
Abstract implementation of AmazonOmics. Convenient method forms pass through to the corresponding overload that takes a request object, which throws an UnsupportedOperationException.

Field Summary
- Fields inherited from interface com.amazonaws.services.omics.AmazonOmics
  ENDPOINT_PREFIX

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`AbortMultipartReadSetUploadResult`	`abortMultipartReadSetUpload(AbortMultipartReadSetUploadRequest request)` Stops a multipart upload.
`AcceptShareResult`	`acceptShare(AcceptShareRequest request)` Accepts a share for an analytics store.
`BatchDeleteReadSetResult`	`batchDeleteReadSet(BatchDeleteReadSetRequest request)` Deletes one or more read sets.
`CancelAnnotationImportJobResult`	`cancelAnnotationImportJob(CancelAnnotationImportJobRequest request)` Cancels an annotation import job.
`CancelRunResult`	`cancelRun(CancelRunRequest request)` Cancels a run.
`CancelVariantImportJobResult`	`cancelVariantImportJob(CancelVariantImportJobRequest request)` Cancels a variant import job.
`CompleteMultipartReadSetUploadResult`	`completeMultipartReadSetUpload(CompleteMultipartReadSetUploadRequest request)` Concludes a multipart upload once you have uploaded all the components.
`CreateAnnotationStoreResult`	`createAnnotationStore(CreateAnnotationStoreRequest request)` Creates an annotation store.
`CreateAnnotationStoreVersionResult`	`createAnnotationStoreVersion(CreateAnnotationStoreVersionRequest request)` Creates a new version of an annotation store.
`CreateMultipartReadSetUploadResult`	`createMultipartReadSetUpload(CreateMultipartReadSetUploadRequest request)` Begins a multipart read set upload.
`CreateReferenceStoreResult`	`createReferenceStore(CreateReferenceStoreRequest request)` Creates a reference store.
`CreateRunGroupResult`	`createRunGroup(CreateRunGroupRequest request)` Creates a run group.
`CreateSequenceStoreResult`	`createSequenceStore(CreateSequenceStoreRequest request)` Creates a sequence store.
`CreateShareResult`	`createShare(CreateShareRequest request)` Creates a share offer that can be accepted outside the account by a subscriber.
`CreateVariantStoreResult`	`createVariantStore(CreateVariantStoreRequest request)` Creates a variant store.
`CreateWorkflowResult`	`createWorkflow(CreateWorkflowRequest request)` Creates a workflow.
`DeleteAnnotationStoreResult`	`deleteAnnotationStore(DeleteAnnotationStoreRequest request)` Deletes an annotation store.
`DeleteAnnotationStoreVersionsResult`	`deleteAnnotationStoreVersions(DeleteAnnotationStoreVersionsRequest request)` Deletes one or multiple versions of an annotation store.
`DeleteReferenceResult`	`deleteReference(DeleteReferenceRequest request)` Deletes a genome reference.
`DeleteReferenceStoreResult`	`deleteReferenceStore(DeleteReferenceStoreRequest request)` Deletes a genome reference store.
`DeleteRunResult`	`deleteRun(DeleteRunRequest request)` Deletes a workflow run.
`DeleteRunGroupResult`	`deleteRunGroup(DeleteRunGroupRequest request)` Deletes a workflow run group.
`DeleteSequenceStoreResult`	`deleteSequenceStore(DeleteSequenceStoreRequest request)` Deletes a sequence store.
`DeleteShareResult`	`deleteShare(DeleteShareRequest request)` Deletes a share of an analytics store.
`DeleteVariantStoreResult`	`deleteVariantStore(DeleteVariantStoreRequest request)` Deletes a variant store.
`DeleteWorkflowResult`	`deleteWorkflow(DeleteWorkflowRequest request)` Deletes a workflow.
`GetAnnotationImportJobResult`	`getAnnotationImportJob(GetAnnotationImportJobRequest request)` Gets information about an annotation import job.
`GetAnnotationStoreResult`	`getAnnotationStore(GetAnnotationStoreRequest request)` Gets information about an annotation store.
`GetAnnotationStoreVersionResult`	`getAnnotationStoreVersion(GetAnnotationStoreVersionRequest request)` Retrieves the metadata for an annotation store version.
`ResponseMetadata`	`getCachedResponseMetadata(AmazonWebServiceRequest request)` Returns additional metadata for a previously executed successful request, typically used for debugging issues where a service isn't acting as expected.
`GetReadSetResult`	`getReadSet(GetReadSetRequest request)` Gets a file from a read set.
`GetReadSetActivationJobResult`	`getReadSetActivationJob(GetReadSetActivationJobRequest request)` Gets information about a read set activation job.
`GetReadSetExportJobResult`	`getReadSetExportJob(GetReadSetExportJobRequest request)` Gets information about a read set export job.
`GetReadSetImportJobResult`	`getReadSetImportJob(GetReadSetImportJobRequest request)` Gets information about a read set import job.
`GetReadSetMetadataResult`	`getReadSetMetadata(GetReadSetMetadataRequest request)` Gets details about a read set.
`GetReferenceResult`	`getReference(GetReferenceRequest request)` Gets a reference file.
`GetReferenceImportJobResult`	`getReferenceImportJob(GetReferenceImportJobRequest request)` Gets information about a reference import job.
`GetReferenceMetadataResult`	`getReferenceMetadata(GetReferenceMetadataRequest request)` Gets information about a genome reference's metadata.
`GetReferenceStoreResult`	`getReferenceStore(GetReferenceStoreRequest request)` Gets information about a reference store.
`GetRunResult`	`getRun(GetRunRequest request)` Gets information about a workflow run.
`GetRunGroupResult`	`getRunGroup(GetRunGroupRequest request)` Gets information about a workflow run group.
`GetRunTaskResult`	`getRunTask(GetRunTaskRequest request)` Gets information about a workflow run task.
`GetSequenceStoreResult`	`getSequenceStore(GetSequenceStoreRequest request)` Gets information about a sequence store.
`GetShareResult`	`getShare(GetShareRequest request)` Retrieves the metadata for a share.
`GetVariantImportJobResult`	`getVariantImportJob(GetVariantImportJobRequest request)` Gets information about a variant import job.
`GetVariantStoreResult`	`getVariantStore(GetVariantStoreRequest request)` Gets information about a variant store.
`GetWorkflowResult`	`getWorkflow(GetWorkflowRequest request)` Gets information about a workflow.
`ListAnnotationImportJobsResult`	`listAnnotationImportJobs(ListAnnotationImportJobsRequest request)` Retrieves a list of annotation import jobs.
`ListAnnotationStoresResult`	`listAnnotationStores(ListAnnotationStoresRequest request)` Retrieves a list of annotation stores.
`ListAnnotationStoreVersionsResult`	`listAnnotationStoreVersions(ListAnnotationStoreVersionsRequest request)` Lists the versions of an annotation store.
`ListMultipartReadSetUploadsResult`	`listMultipartReadSetUploads(ListMultipartReadSetUploadsRequest request)` Lists all multipart read set uploads and their statuses.
`ListReadSetActivationJobsResult`	`listReadSetActivationJobs(ListReadSetActivationJobsRequest request)` Retrieves a list of read set activation jobs.
`ListReadSetExportJobsResult`	`listReadSetExportJobs(ListReadSetExportJobsRequest request)` Retrieves a list of read set export jobs.
`ListReadSetImportJobsResult`	`listReadSetImportJobs(ListReadSetImportJobsRequest request)` Retrieves a list of read set import jobs.
`ListReadSetsResult`	`listReadSets(ListReadSetsRequest request)` Retrieves a list of read sets.
`ListReadSetUploadPartsResult`	`listReadSetUploadParts(ListReadSetUploadPartsRequest request)` This operation will list all parts in a requested multipart upload for a sequence store.
`ListReferenceImportJobsResult`	`listReferenceImportJobs(ListReferenceImportJobsRequest request)` Retrieves a list of reference import jobs.
`ListReferencesResult`	`listReferences(ListReferencesRequest request)` Retrieves a list of references.
`ListReferenceStoresResult`	`listReferenceStores(ListReferenceStoresRequest request)` Retrieves a list of reference stores.
`ListRunGroupsResult`	`listRunGroups(ListRunGroupsRequest request)` Retrieves a list of run groups.
`ListRunsResult`	`listRuns(ListRunsRequest request)` Retrieves a list of runs.
`ListRunTasksResult`	`listRunTasks(ListRunTasksRequest request)` Retrieves a list of tasks for a run.
`ListSequenceStoresResult`	`listSequenceStores(ListSequenceStoresRequest request)` Retrieves a list of sequence stores.
`ListSharesResult`	`listShares(ListSharesRequest request)` Lists all shares associated with an account.
`ListTagsForResourceResult`	`listTagsForResource(ListTagsForResourceRequest request)` Retrieves a list of tags for a resource.
`ListVariantImportJobsResult`	`listVariantImportJobs(ListVariantImportJobsRequest request)` Retrieves a list of variant import jobs.
`ListVariantStoresResult`	`listVariantStores(ListVariantStoresRequest request)` Retrieves a list of variant stores.
`ListWorkflowsResult`	`listWorkflows(ListWorkflowsRequest request)` Retrieves a list of workflows.
`void`	`shutdown()` Shuts down this client object, releasing any resources that might be held open.
`StartAnnotationImportJobResult`	`startAnnotationImportJob(StartAnnotationImportJobRequest request)` Starts an annotation import job.
`StartReadSetActivationJobResult`	`startReadSetActivationJob(StartReadSetActivationJobRequest request)` Activates an archived read set.
`StartReadSetExportJobResult`	`startReadSetExportJob(StartReadSetExportJobRequest request)` Exports a read set to Amazon S3.
`StartReadSetImportJobResult`	`startReadSetImportJob(StartReadSetImportJobRequest request)` Starts a read set import job.
`StartReferenceImportJobResult`	`startReferenceImportJob(StartReferenceImportJobRequest request)` Starts a reference import job.
`StartRunResult`	`startRun(StartRunRequest request)` Starts a workflow run.
`StartVariantImportJobResult`	`startVariantImportJob(StartVariantImportJobRequest request)` Starts a variant import job.
`TagResourceResult`	`tagResource(TagResourceRequest request)` Tags a resource.
`UntagResourceResult`	`untagResource(UntagResourceRequest request)` Removes tags from a resource.
`UpdateAnnotationStoreResult`	`updateAnnotationStore(UpdateAnnotationStoreRequest request)` Updates an annotation store.
`UpdateAnnotationStoreVersionResult`	`updateAnnotationStoreVersion(UpdateAnnotationStoreVersionRequest request)` Updates the description of an annotation store version.
`UpdateRunGroupResult`	`updateRunGroup(UpdateRunGroupRequest request)` Updates a run group.
`UpdateVariantStoreResult`	`updateVariantStore(UpdateVariantStoreRequest request)` Updates a variant store.
`UpdateWorkflowResult`	`updateWorkflow(UpdateWorkflowRequest request)` Updates a workflow.
`UploadReadSetPartResult`	`uploadReadSetPart(UploadReadSetPartRequest request)` This operation uploads a specific part of a read set.
`AmazonOmicsWaiters`	`waiters()`

Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Method Detail
  - abortMultipartReadSetUpload
```
public AbortMultipartReadSetUploadResult abortMultipartReadSetUpload(AbortMultipartReadSetUploadRequest request)
```
    Description copied from interface: AmazonOmics
    
    Stops a multipart upload.
    
    Specified by:
    
    abortMultipartReadSetUpload in interface AmazonOmics
    
    Returns:
    
    Result of the AbortMultipartReadSetUpload operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - acceptShare
```
public AcceptShareResult acceptShare(AcceptShareRequest request)
```
    Description copied from interface: AmazonOmics
    
    Accepts a share for an analytics store.
    
    Specified by:
    
    acceptShare in interface AmazonOmics
    
    Returns:
    
    Result of the AcceptShare operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - batchDeleteReadSet
```
public BatchDeleteReadSetResult batchDeleteReadSet(BatchDeleteReadSetRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes one or more read sets.
    
    Specified by:
    
    batchDeleteReadSet in interface AmazonOmics
    
    Returns:
    
    Result of the BatchDeleteReadSet operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - cancelAnnotationImportJob
```
public CancelAnnotationImportJobResult cancelAnnotationImportJob(CancelAnnotationImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Cancels an annotation import job.
    
    Specified by:
    
    cancelAnnotationImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the CancelAnnotationImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - cancelRun
```
public CancelRunResult cancelRun(CancelRunRequest request)
```
    Description copied from interface: AmazonOmics
    
    Cancels a run.
    
    Specified by:
    
    cancelRun in interface AmazonOmics
    
    Returns:
    
    Result of the CancelRun operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - cancelVariantImportJob
```
public CancelVariantImportJobResult cancelVariantImportJob(CancelVariantImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Cancels a variant import job.
    
    Specified by:
    
    cancelVariantImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the CancelVariantImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - completeMultipartReadSetUpload
```
public CompleteMultipartReadSetUploadResult completeMultipartReadSetUpload(CompleteMultipartReadSetUploadRequest request)
```
    Description copied from interface: AmazonOmics
    
    Concludes a multipart upload once you have uploaded all the components.
    
    Specified by:
    
    completeMultipartReadSetUpload in interface AmazonOmics
    
    Returns:
    
    Result of the CompleteMultipartReadSetUpload operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createAnnotationStore
```
public CreateAnnotationStoreResult createAnnotationStore(CreateAnnotationStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates an annotation store.
    
    Specified by:
    
    createAnnotationStore in interface AmazonOmics
    
    Returns:
    
    Result of the CreateAnnotationStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createAnnotationStoreVersion
```
public CreateAnnotationStoreVersionResult createAnnotationStoreVersion(CreateAnnotationStoreVersionRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a new version of an annotation store.
    
    Specified by:
    
    createAnnotationStoreVersion in interface AmazonOmics
    
    Returns:
    
    Result of the CreateAnnotationStoreVersion operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createMultipartReadSetUpload
```
public CreateMultipartReadSetUploadResult createMultipartReadSetUpload(CreateMultipartReadSetUploadRequest request)
```
    Description copied from interface: AmazonOmics
    
    Begins a multipart read set upload.
    
    Specified by:
    
    createMultipartReadSetUpload in interface AmazonOmics
    
    Returns:
    
    Result of the CreateMultipartReadSetUpload operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createReferenceStore
```
public CreateReferenceStoreResult createReferenceStore(CreateReferenceStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a reference store.
    
    Specified by:
    
    createReferenceStore in interface AmazonOmics
    
    Returns:
    
    Result of the CreateReferenceStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createRunGroup
```
public CreateRunGroupResult createRunGroup(CreateRunGroupRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a run group.
    
    Specified by:
    
    createRunGroup in interface AmazonOmics
    
    Returns:
    
    Result of the CreateRunGroup operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createSequenceStore
```
public CreateSequenceStoreResult createSequenceStore(CreateSequenceStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a sequence store.
    
    Specified by:
    
    createSequenceStore in interface AmazonOmics
    
    Returns:
    
    Result of the CreateSequenceStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createShare
```
public CreateShareResult createShare(CreateShareRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a share offer that can be accepted outside the account by a subscriber. The share is created by the owner and accepted by the principal subscriber.
    
    Specified by:
    
    createShare in interface AmazonOmics
    
    Returns:
    
    Result of the CreateShare operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createVariantStore
```
public CreateVariantStoreResult createVariantStore(CreateVariantStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a variant store.
    
    Specified by:
    
    createVariantStore in interface AmazonOmics
    
    Returns:
    
    Result of the CreateVariantStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - createWorkflow
```
public CreateWorkflowResult createWorkflow(CreateWorkflowRequest request)
```
    Description copied from interface: AmazonOmics
    
    Creates a workflow.
    
    Specified by:
    
    createWorkflow in interface AmazonOmics
    
    Returns:
    
    Result of the CreateWorkflow operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteAnnotationStore
```
public DeleteAnnotationStoreResult deleteAnnotationStore(DeleteAnnotationStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes an annotation store.
    
    Specified by:
    
    deleteAnnotationStore in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteAnnotationStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteAnnotationStoreVersions
```
public DeleteAnnotationStoreVersionsResult deleteAnnotationStoreVersions(DeleteAnnotationStoreVersionsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes one or multiple versions of an annotation store.
    
    Specified by:
    
    deleteAnnotationStoreVersions in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteAnnotationStoreVersions operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteReference
```
public DeleteReferenceResult deleteReference(DeleteReferenceRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a genome reference.
    
    Specified by:
    
    deleteReference in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteReference operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteReferenceStore
```
public DeleteReferenceStoreResult deleteReferenceStore(DeleteReferenceStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a genome reference store.
    
    Specified by:
    
    deleteReferenceStore in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteReferenceStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteRun
```
public DeleteRunResult deleteRun(DeleteRunRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a workflow run.
    
    Specified by:
    
    deleteRun in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteRun operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteRunGroup
```
public DeleteRunGroupResult deleteRunGroup(DeleteRunGroupRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a workflow run group.
    
    Specified by:
    
    deleteRunGroup in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteRunGroup operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteSequenceStore
```
public DeleteSequenceStoreResult deleteSequenceStore(DeleteSequenceStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a sequence store.
    
    Specified by:
    
    deleteSequenceStore in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteSequenceStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteShare
```
public DeleteShareResult deleteShare(DeleteShareRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a share of an analytics store.
    
    Specified by:
    
    deleteShare in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteShare operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteVariantStore
```
public DeleteVariantStoreResult deleteVariantStore(DeleteVariantStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a variant store.
    
    Specified by:
    
    deleteVariantStore in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteVariantStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - deleteWorkflow
```
public DeleteWorkflowResult deleteWorkflow(DeleteWorkflowRequest request)
```
    Description copied from interface: AmazonOmics
    
    Deletes a workflow.
    
    Specified by:
    
    deleteWorkflow in interface AmazonOmics
    
    Returns:
    
    Result of the DeleteWorkflow operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getAnnotationImportJob
```
public GetAnnotationImportJobResult getAnnotationImportJob(GetAnnotationImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about an annotation import job.
    
    Specified by:
    
    getAnnotationImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the GetAnnotationImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getAnnotationStore
```
public GetAnnotationStoreResult getAnnotationStore(GetAnnotationStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about an annotation store.
    
    Specified by:
    
    getAnnotationStore in interface AmazonOmics
    
    Returns:
    
    Result of the GetAnnotationStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getAnnotationStoreVersion
```
public GetAnnotationStoreVersionResult getAnnotationStoreVersion(GetAnnotationStoreVersionRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves the metadata for an annotation store version.
    
    Specified by:
    
    getAnnotationStoreVersion in interface AmazonOmics
    
    Returns:
    
    Result of the GetAnnotationStoreVersion operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReadSet
```
public GetReadSetResult getReadSet(GetReadSetRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets a file from a read set.
    
    Specified by:
    
    getReadSet in interface AmazonOmics
    
    Returns:
    
    Result of the GetReadSet operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReadSetActivationJob
```
public GetReadSetActivationJobResult getReadSetActivationJob(GetReadSetActivationJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a read set activation job.
    
    Specified by:
    
    getReadSetActivationJob in interface AmazonOmics
    
    Returns:
    
    Result of the GetReadSetActivationJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReadSetExportJob
```
public GetReadSetExportJobResult getReadSetExportJob(GetReadSetExportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a read set export job.
    
    Specified by:
    
    getReadSetExportJob in interface AmazonOmics
    
    Returns:
    
    Result of the GetReadSetExportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReadSetImportJob
```
public GetReadSetImportJobResult getReadSetImportJob(GetReadSetImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a read set import job.
    
    Specified by:
    
    getReadSetImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the GetReadSetImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReadSetMetadata
```
public GetReadSetMetadataResult getReadSetMetadata(GetReadSetMetadataRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets details about a read set.
    
    Specified by:
    
    getReadSetMetadata in interface AmazonOmics
    
    Returns:
    
    Result of the GetReadSetMetadata operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReference
```
public GetReferenceResult getReference(GetReferenceRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets a reference file.
    
    Specified by:
    
    getReference in interface AmazonOmics
    
    Returns:
    
    Result of the GetReference operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReferenceImportJob
```
public GetReferenceImportJobResult getReferenceImportJob(GetReferenceImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a reference import job.
    
    Specified by:
    
    getReferenceImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the GetReferenceImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReferenceMetadata
```
public GetReferenceMetadataResult getReferenceMetadata(GetReferenceMetadataRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a genome reference's metadata.
    
    Specified by:
    
    getReferenceMetadata in interface AmazonOmics
    
    Returns:
    
    Result of the GetReferenceMetadata operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getReferenceStore
```
public GetReferenceStoreResult getReferenceStore(GetReferenceStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a reference store.
    
    Specified by:
    
    getReferenceStore in interface AmazonOmics
    
    Returns:
    
    Result of the GetReferenceStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getRun
```
public GetRunResult getRun(GetRunRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a workflow run.
    
    Specified by:
    
    getRun in interface AmazonOmics
    
    Returns:
    
    Result of the GetRun operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getRunGroup
```
public GetRunGroupResult getRunGroup(GetRunGroupRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a workflow run group.
    
    Specified by:
    
    getRunGroup in interface AmazonOmics
    
    Returns:
    
    Result of the GetRunGroup operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getRunTask
```
public GetRunTaskResult getRunTask(GetRunTaskRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a workflow run task.
    
    Specified by:
    
    getRunTask in interface AmazonOmics
    
    Returns:
    
    Result of the GetRunTask operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getSequenceStore
```
public GetSequenceStoreResult getSequenceStore(GetSequenceStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a sequence store.
    
    Specified by:
    
    getSequenceStore in interface AmazonOmics
    
    Returns:
    
    Result of the GetSequenceStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getShare
```
public GetShareResult getShare(GetShareRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves the metadata for a share.
    
    Specified by:
    
    getShare in interface AmazonOmics
    
    Returns:
    
    Result of the GetShare operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getVariantImportJob
```
public GetVariantImportJobResult getVariantImportJob(GetVariantImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a variant import job.
    
    Specified by:
    
    getVariantImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the GetVariantImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getVariantStore
```
public GetVariantStoreResult getVariantStore(GetVariantStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a variant store.
    
    Specified by:
    
    getVariantStore in interface AmazonOmics
    
    Returns:
    
    Result of the GetVariantStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - getWorkflow
```
public GetWorkflowResult getWorkflow(GetWorkflowRequest request)
```
    Description copied from interface: AmazonOmics
    
    Gets information about a workflow.
    
    Specified by:
    
    getWorkflow in interface AmazonOmics
    
    Returns:
    
    Result of the GetWorkflow operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listAnnotationImportJobs
```
public ListAnnotationImportJobsResult listAnnotationImportJobs(ListAnnotationImportJobsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of annotation import jobs.
    
    Specified by:
    
    listAnnotationImportJobs in interface AmazonOmics
    
    Returns:
    
    Result of the ListAnnotationImportJobs operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listAnnotationStoreVersions
```
public ListAnnotationStoreVersionsResult listAnnotationStoreVersions(ListAnnotationStoreVersionsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Lists the versions of an annotation store.
    
    Specified by:
    
    listAnnotationStoreVersions in interface AmazonOmics
    
    Returns:
    
    Result of the ListAnnotationStoreVersions operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listAnnotationStores
```
public ListAnnotationStoresResult listAnnotationStores(ListAnnotationStoresRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of annotation stores.
    
    Specified by:
    
    listAnnotationStores in interface AmazonOmics
    
    Returns:
    
    Result of the ListAnnotationStores operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listMultipartReadSetUploads
```
public ListMultipartReadSetUploadsResult listMultipartReadSetUploads(ListMultipartReadSetUploadsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Lists all multipart read set uploads and their statuses.
    
    Specified by:
    
    listMultipartReadSetUploads in interface AmazonOmics
    
    Returns:
    
    Result of the ListMultipartReadSetUploads operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReadSetActivationJobs
```
public ListReadSetActivationJobsResult listReadSetActivationJobs(ListReadSetActivationJobsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of read set activation jobs.
    
    Specified by:
    
    listReadSetActivationJobs in interface AmazonOmics
    
    Returns:
    
    Result of the ListReadSetActivationJobs operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReadSetExportJobs
```
public ListReadSetExportJobsResult listReadSetExportJobs(ListReadSetExportJobsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of read set export jobs.
    
    Specified by:
    
    listReadSetExportJobs in interface AmazonOmics
    
    Returns:
    
    Result of the ListReadSetExportJobs operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReadSetImportJobs
```
public ListReadSetImportJobsResult listReadSetImportJobs(ListReadSetImportJobsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of read set import jobs.
    
    Specified by:
    
    listReadSetImportJobs in interface AmazonOmics
    
    Returns:
    
    Result of the ListReadSetImportJobs operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReadSetUploadParts
```
public ListReadSetUploadPartsResult listReadSetUploadParts(ListReadSetUploadPartsRequest request)
```
    Description copied from interface: AmazonOmics
    
    This operation will list all parts in a requested multipart upload for a sequence store.
    
    Specified by:
    
    listReadSetUploadParts in interface AmazonOmics
    
    Returns:
    
    Result of the ListReadSetUploadParts operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReadSets
```
public ListReadSetsResult listReadSets(ListReadSetsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of read sets.
    
    Specified by:
    
    listReadSets in interface AmazonOmics
    
    Returns:
    
    Result of the ListReadSets operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReferenceImportJobs
```
public ListReferenceImportJobsResult listReferenceImportJobs(ListReferenceImportJobsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of reference import jobs.
    
    Specified by:
    
    listReferenceImportJobs in interface AmazonOmics
    
    Returns:
    
    Result of the ListReferenceImportJobs operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReferenceStores
```
public ListReferenceStoresResult listReferenceStores(ListReferenceStoresRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of reference stores.
    
    Specified by:
    
    listReferenceStores in interface AmazonOmics
    
    Returns:
    
    Result of the ListReferenceStores operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listReferences
```
public ListReferencesResult listReferences(ListReferencesRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of references.
    
    Specified by:
    
    listReferences in interface AmazonOmics
    
    Returns:
    
    Result of the ListReferences operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listRunGroups
```
public ListRunGroupsResult listRunGroups(ListRunGroupsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of run groups.
    
    Specified by:
    
    listRunGroups in interface AmazonOmics
    
    Returns:
    
    Result of the ListRunGroups operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listRunTasks
```
public ListRunTasksResult listRunTasks(ListRunTasksRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of tasks for a run.
    
    Specified by:
    
    listRunTasks in interface AmazonOmics
    
    Returns:
    
    Result of the ListRunTasks operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listRuns
```
public ListRunsResult listRuns(ListRunsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of runs.
    
    Specified by:
    
    listRuns in interface AmazonOmics
    
    Returns:
    
    Result of the ListRuns operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listSequenceStores
```
public ListSequenceStoresResult listSequenceStores(ListSequenceStoresRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of sequence stores.
    
    Specified by:
    
    listSequenceStores in interface AmazonOmics
    
    Returns:
    
    Result of the ListSequenceStores operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listShares
```
public ListSharesResult listShares(ListSharesRequest request)
```
    Description copied from interface: AmazonOmics
    
    Lists all shares associated with an account.
    
    Specified by:
    
    listShares in interface AmazonOmics
    
    Returns:
    
    Result of the ListShares operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listTagsForResource
```
public ListTagsForResourceResult listTagsForResource(ListTagsForResourceRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of tags for a resource.
    
    Specified by:
    
    listTagsForResource in interface AmazonOmics
    
    Returns:
    
    Result of the ListTagsForResource operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listVariantImportJobs
```
public ListVariantImportJobsResult listVariantImportJobs(ListVariantImportJobsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of variant import jobs.
    
    Specified by:
    
    listVariantImportJobs in interface AmazonOmics
    
    Returns:
    
    Result of the ListVariantImportJobs operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listVariantStores
```
public ListVariantStoresResult listVariantStores(ListVariantStoresRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of variant stores.
    
    Specified by:
    
    listVariantStores in interface AmazonOmics
    
    Returns:
    
    Result of the ListVariantStores operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - listWorkflows
```
public ListWorkflowsResult listWorkflows(ListWorkflowsRequest request)
```
    Description copied from interface: AmazonOmics
    
    Retrieves a list of workflows.
    
    Specified by:
    
    listWorkflows in interface AmazonOmics
    
    Returns:
    
    Result of the ListWorkflows operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startAnnotationImportJob
```
public StartAnnotationImportJobResult startAnnotationImportJob(StartAnnotationImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Starts an annotation import job.
    
    Specified by:
    
    startAnnotationImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the StartAnnotationImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startReadSetActivationJob
```
public StartReadSetActivationJobResult startReadSetActivationJob(StartReadSetActivationJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Activates an archived read set. To reduce storage charges, Amazon Omics archives unused read sets after 30 days.
    
    Specified by:
    
    startReadSetActivationJob in interface AmazonOmics
    
    Returns:
    
    Result of the StartReadSetActivationJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startReadSetExportJob
```
public StartReadSetExportJobResult startReadSetExportJob(StartReadSetExportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Exports a read set to Amazon S3.
    
    Specified by:
    
    startReadSetExportJob in interface AmazonOmics
    
    Returns:
    
    Result of the StartReadSetExportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startReadSetImportJob
```
public StartReadSetImportJobResult startReadSetImportJob(StartReadSetImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Starts a read set import job.
    
    Specified by:
    
    startReadSetImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the StartReadSetImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startReferenceImportJob
```
public StartReferenceImportJobResult startReferenceImportJob(StartReferenceImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Starts a reference import job.
    
    Specified by:
    
    startReferenceImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the StartReferenceImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startRun
```
public StartRunResult startRun(StartRunRequest request)
```
    Description copied from interface: AmazonOmics
    
    Starts a workflow run. To duplicate a run, specify the run's ID and a role ARN. The remaining parameters are copied from the previous run.
    
    The total number of runs in your account is subject to a quota per Region. To avoid needing to delete runs manually, you can set the retention mode to REMOVE. Runs with this setting are deleted automatically when the run quoata is exceeded.
    
    Specified by:
    
    startRun in interface AmazonOmics
    
    Returns:
    
    Result of the StartRun operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - startVariantImportJob
```
public StartVariantImportJobResult startVariantImportJob(StartVariantImportJobRequest request)
```
    Description copied from interface: AmazonOmics
    
    Starts a variant import job.
    
    Specified by:
    
    startVariantImportJob in interface AmazonOmics
    
    Returns:
    
    Result of the StartVariantImportJob operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - tagResource
```
public TagResourceResult tagResource(TagResourceRequest request)
```
    Description copied from interface: AmazonOmics
    
    Tags a resource.
    
    Specified by:
    
    tagResource in interface AmazonOmics
    
    Returns:
    
    Result of the TagResource operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - untagResource
```
public UntagResourceResult untagResource(UntagResourceRequest request)
```
    Description copied from interface: AmazonOmics
    
    Removes tags from a resource.
    
    Specified by:
    
    untagResource in interface AmazonOmics
    
    Returns:
    
    Result of the UntagResource operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - updateAnnotationStore
```
public UpdateAnnotationStoreResult updateAnnotationStore(UpdateAnnotationStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Updates an annotation store.
    
    Specified by:
    
    updateAnnotationStore in interface AmazonOmics
    
    Returns:
    
    Result of the UpdateAnnotationStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - updateAnnotationStoreVersion
```
public UpdateAnnotationStoreVersionResult updateAnnotationStoreVersion(UpdateAnnotationStoreVersionRequest request)
```
    Description copied from interface: AmazonOmics
    
    Updates the description of an annotation store version.
    
    Specified by:
    
    updateAnnotationStoreVersion in interface AmazonOmics
    
    Returns:
    
    Result of the UpdateAnnotationStoreVersion operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - updateRunGroup
```
public UpdateRunGroupResult updateRunGroup(UpdateRunGroupRequest request)
```
    Description copied from interface: AmazonOmics
    
    Updates a run group.
    
    Specified by:
    
    updateRunGroup in interface AmazonOmics
    
    Returns:
    
    Result of the UpdateRunGroup operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - updateVariantStore
```
public UpdateVariantStoreResult updateVariantStore(UpdateVariantStoreRequest request)
```
    Description copied from interface: AmazonOmics
    
    Updates a variant store.
    
    Specified by:
    
    updateVariantStore in interface AmazonOmics
    
    Returns:
    
    Result of the UpdateVariantStore operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - updateWorkflow
```
public UpdateWorkflowResult updateWorkflow(UpdateWorkflowRequest request)
```
    Description copied from interface: AmazonOmics
    
    Updates a workflow.
    
    Specified by:
    
    updateWorkflow in interface AmazonOmics
    
    Returns:
    
    Result of the UpdateWorkflow operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - uploadReadSetPart
```
public UploadReadSetPartResult uploadReadSetPart(UploadReadSetPartRequest request)
```
    Description copied from interface: AmazonOmics
    
    This operation uploads a specific part of a read set. If you upload a new part using a previously used part number, the previously uploaded part will be overwritten.
    
    Specified by:
    
    uploadReadSetPart in interface AmazonOmics
    
    Returns:
    
    Result of the UploadReadSetPart operation returned by the service.
    
    See Also:
    
    AWS API Documentation
  - shutdown
```
public void shutdown()
```
    Description copied from interface: AmazonOmics
    
    Shuts down this client object, releasing any resources that might be held open. This is an optional method, and callers are not expected to call it, but can if they want to explicitly release any open resources. Once a client has been shutdown, it should not be used to make any more requests.
    
    Specified by:
    
    shutdown in interface AmazonOmics
  - getCachedResponseMetadata
```
public ResponseMetadata getCachedResponseMetadata(AmazonWebServiceRequest request)
```
    Description copied from interface: AmazonOmics
    
    Returns additional metadata for a previously executed successful request, typically used for debugging issues where a service isn't acting as expected. This data isn't considered part of the result data returned by an operation, so it's available through this separate, diagnostic interface.
    Response metadata is only cached for a limited period of time, so if you need to access this extra diagnostic information for an executed request, you should use this method to retrieve it as soon as possible after executing a request.
    
    Specified by:
    
    getCachedResponseMetadata in interface AmazonOmics
    
    Parameters:
    
    request - The originally executed request.
    
    Returns:
    
    The response metadata for the specified request, or null if none is available.
  - waiters
```
public AmazonOmicsWaiters waiters()
```
    Specified by:
    
    waiters in interface AmazonOmics

AWS SDK for Java 1.x API Reference - 1.12.600

Class AbstractAmazonOmics

Field Summary

Fields inherited from interface com.amazonaws.services.omics.AmazonOmics

Method Summary

Methods inherited from class java.lang.Object

Method Detail

abortMultipartReadSetUpload

acceptShare

batchDeleteReadSet

cancelAnnotationImportJob

cancelRun

cancelVariantImportJob

completeMultipartReadSetUpload

createAnnotationStore

createAnnotationStoreVersion

createMultipartReadSetUpload

createReferenceStore

createRunGroup

createSequenceStore

createShare

createVariantStore

createWorkflow

deleteAnnotationStore

deleteAnnotationStoreVersions

deleteReference

deleteReferenceStore

deleteRun

deleteRunGroup

deleteSequenceStore

deleteShare

deleteVariantStore

deleteWorkflow

getAnnotationImportJob

getAnnotationStore

getAnnotationStoreVersion

getReadSet

getReadSetActivationJob

getReadSetExportJob

getReadSetImportJob

getReadSetMetadata

getReference

getReferenceImportJob

getReferenceMetadata

getReferenceStore

getRun

getRunGroup

getRunTask

getSequenceStore

getShare

getVariantImportJob

getVariantStore

getWorkflow

listAnnotationImportJobs

listAnnotationStoreVersions

listAnnotationStores

listMultipartReadSetUploads

listReadSetActivationJobs

listReadSetExportJobs

listReadSetImportJobs

listReadSetUploadParts

listReadSets

listReferenceImportJobs

listReferenceStores

listReferences

listRunGroups

listRunTasks

listRuns

listSequenceStores

listShares

listTagsForResource

listVariantImportJobs

listVariantStores

listWorkflows

startAnnotationImportJob

startReadSetActivationJob

startReadSetExportJob

startReadSetImportJob

startReferenceImportJob

startRun