Packages

p

com.fulcrumgenomics

basecalling

package basecalling

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Type Members

  1. case class BasecallingParams (lane: Int, barcodeFile: FgBioDef.FilePath, libraryParamsFile: FgBioDef.FilePath, bams: Seq[FgBioDef.PathToBam]) extends Product with Serializable

    A small class to store where the basecalling parameter and BAM files are located.

  2. class ExtractBasecallingParamsForPicard extends FgBioTool with LazyLogging
    Annotations
    @ClpAnnotation()
  3. class ExtractIlluminaRunInfo extends FgBioTool
    Annotations
    @ClpAnnotation()

Value Members

  1. object BasecallingParams extends Serializable

    Contains methods useful for extractin basecalling paramter information.

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