case class PhaseBlock extends GenomicSpan with Product with Serializable
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final
def
!=(arg0: Any): Boolean
- Definition Classes
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final
def
##(): Int
- Definition Classes
- AnyRef → Any
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def
+(other: String): String
- Implicit
- This member is added by an implicit conversion from PhaseBlock to any2stringadd[PhaseBlock] performed by method any2stringadd in scala.Predef.
- Definition Classes
- any2stringadd
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def
->[B](y: B): (PhaseBlock, B)
- Implicit
- This member is added by an implicit conversion from PhaseBlock to ArrowAssoc[PhaseBlock] performed by method ArrowAssoc in scala.Predef.
- Definition Classes
- ArrowAssoc
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- @inline()
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final
def
==(arg0: Any): Boolean
- Definition Classes
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final
def
asInstanceOf[T0]: T0
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def
clone(): AnyRef
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- @throws( ... )
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def
contains(arg0: Locatable): Boolean
- Definition Classes
- Locatable
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val
contig: String
- Definition Classes
- PhaseBlock → GenomicSpan
-
def
contigsMatch(arg0: Locatable): Boolean
- Definition Classes
- Locatable
-
def
encloses(other: GenomicSpan): Boolean
True if this genomic span encloses the other genomic span, false otherwise.
True if this genomic span encloses the other genomic span, false otherwise.
- Definition Classes
- GenomicSpan
-
val
end: Int
- Definition Classes
- PhaseBlock → GenomicSpan
-
def
ensuring(cond: (PhaseBlock) ⇒ Boolean, msg: ⇒ Any): PhaseBlock
- Implicit
- This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
-
def
ensuring(cond: (PhaseBlock) ⇒ Boolean): PhaseBlock
- Implicit
- This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
-
def
ensuring(cond: Boolean, msg: ⇒ Any): PhaseBlock
- Implicit
- This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
-
def
ensuring(cond: Boolean): PhaseBlock
- Implicit
- This member is added by an implicit conversion from PhaseBlock to Ensuring[PhaseBlock] performed by method Ensuring in scala.Predef.
- Definition Classes
- Ensuring
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final
def
eq(arg0: AnyRef): Boolean
- Definition Classes
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def
finalize(): Unit
- Attributes
- protected[java.lang]
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- @throws( classOf[java.lang.Throwable] )
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def
formatted(fmtstr: String): String
- Implicit
- This member is added by an implicit conversion from PhaseBlock to StringFormat[PhaseBlock] performed by method StringFormat in scala.Predef.
- Definition Classes
- StringFormat
- Annotations
- @inline()
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final
def
getClass(): Class[_]
- Definition Classes
- AnyRef → Any
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def
getContig(): String
- Definition Classes
- GenomicSpan → Locatable
-
def
getEnd(): Int
- Definition Classes
- GenomicSpan → Locatable
-
def
getLengthOnReference(): Int
- Definition Classes
- Locatable
-
def
getStart(): Int
- Definition Classes
- GenomicSpan → Locatable
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final
def
isInstanceOf[T0]: Boolean
- Definition Classes
- Any
-
def
length: Int
- Definition Classes
- GenomicSpan
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final
def
ne(arg0: AnyRef): Boolean
- Definition Classes
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final
def
notify(): Unit
- Definition Classes
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final
def
notifyAll(): Unit
- Definition Classes
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def
overlaps(other: GenomicSpan): Boolean
True if the two genomic spans overlap, false otherwise.
True if the two genomic spans overlap, false otherwise.
- Definition Classes
- GenomicSpan
-
def
overlaps(arg0: Locatable): Boolean
- Definition Classes
- Locatable
-
val
start: Int
- Definition Classes
- PhaseBlock → GenomicSpan
-
final
def
synchronized[T0](arg0: ⇒ T0): T0
- Definition Classes
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final
def
wait(): Unit
- Definition Classes
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final
def
wait(arg0: Long, arg1: Int): Unit
- Definition Classes
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- @throws( ... )
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final
def
wait(arg0: Long): Unit
- Definition Classes
- AnyRef
- Annotations
- @throws( ... )
-
def
withinDistanceOf(arg0: Locatable, arg1: Int): Boolean
- Definition Classes
- Locatable
-
def
→[B](y: B): (PhaseBlock, B)
- Implicit
- This member is added by an implicit conversion from PhaseBlock to ArrowAssoc[PhaseBlock] performed by method ArrowAssoc in scala.Predef.
- Definition Classes
- ArrowAssoc