htsjdk.samtools

Class SAMRecordUtil

java.lang.Object

htsjdk.samtools.SAMRecordUtil

public class SAMRecordUtil
extends java.lang.Object

Constructor Summary

Constructors

Constructor and Description
SAMRecordUtil()

Method Summary

Methods

Modifier and Type	Method and Description
static void	reverseArray(byte[] array) Reverse the given array in place.
static void	reverseComplement(SAMRecord rec) Reverse-complement all known sequence and base quality attributes of the SAMRecord.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SAMRecordUtil

public SAMRecordUtil()

Method Detail

reverseComplement

public static void reverseComplement(SAMRecord rec)

Reverse-complement all known sequence and base quality attributes of the SAMRecord.

reverseArray

public static void reverseArray(byte[] array)

Reverse the given array in place.