public enum FastqQualityFormat extends java.lang.Enum<FastqQualityFormat>
Enum Constant and Description |
---|
Illumina
Recent Solexa/Illumina (pipeline 1.3+) style scores which encode PHRED qualities using an ASCII offset of 64
|
Solexa
Early Solexa/Illumina (pre pipeline 1.3) style scores which encode Solexa qualities using an ASCII offset of 64
|
Standard
Sanger style FASTQ files which encode PHRED qualities using an ASCII offset of 33
|
Modifier and Type | Method and Description |
---|---|
static FastqQualityFormat |
valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.
|
static FastqQualityFormat[] |
values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final FastqQualityFormat Solexa
public static final FastqQualityFormat Illumina
public static final FastqQualityFormat Standard
public static FastqQualityFormat[] values()
for (FastqQualityFormat c : FastqQualityFormat.values()) System.out.println(c);
public static FastqQualityFormat valueOf(java.lang.String name)
name
- the name of the enum constant to be returned.java.lang.IllegalArgumentException
- if this enum type has no constant with the specified namejava.lang.NullPointerException
- if the argument is null