htsjdk.variant.vcf

Class VCFPassThruTextTransformer

java.lang.Object

htsjdk.variant.vcf.VCFPassThruTextTransformer

All Implemented Interfaces:

VCFTextTransformer

public class VCFPassThruTextTransformer
extends java.lang.Object
implements VCFTextTransformer

A no-op implementation of VCFTextTransformer for pre-v43 VCFs, when such encodings are not supported and no transformation need be done.

Constructor Summary

Constructors

Constructor and Description
VCFPassThruTextTransformer()

Method Summary

Modifier and Type	Method and Description
java.util.List<java.lang.String>	decodeText(java.util.List<java.lang.String> rawParts) No-op decoder for lists of strings
java.lang.String	decodeText(java.lang.String rawPart) No-op decoder for a single string

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

VCFPassThruTextTransformer

public VCFPassThruTextTransformer()

Method Detail

decodeText

public java.lang.String decodeText(java.lang.String rawPart)

No-op decoder for a single string

Specified by:

decodeText in interface VCFTextTransformer

Parameters:

rawPart - the raw string to be decoded

Returns:

the raw string with no transformation done

decodeText

public java.util.List<java.lang.String> decodeText(java.util.List<java.lang.String> rawParts)

No-op decoder for lists of strings

Specified by:

decodeText in interface VCFTextTransformer

Parameters:

rawParts - a list of raw strings

Returns:

the list of raw strings with no transformations done