public class ReferenceCache
extends java.lang.Object
Constructor and Description |
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ReferenceCache(ngs.ReadCollection run,
SAMFileHeader virtualHeader) |
Modifier and Type | Method and Description |
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ngs.Reference |
get(int referenceIndex)
This method returns Reference objects by reference indexes in SAM header
Those obejcts can be used from different threads
This method maintains thread safety, so that if Reference object is set already, it can be easily returned
without locks.
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public ReferenceCache(ngs.ReadCollection run, SAMFileHeader virtualHeader)
public ngs.Reference get(int referenceIndex)
referenceIndex
- reference index in