Package htsjdk.samtools

Class CigarElement

java.lang.Object

htsjdk.samtools.CigarElement

All Implemented Interfaces:

Serializable

public class CigarElement
extends Object
implements Serializable

One component of a cigar string. The component comprises the operator, and the number of bases to which the operator applies.

See Also:

• Serialized Form

Field Summary

Fields

Modifier and Type	Field	Description
static final long	serialVersionUID

Constructor Summary

Constructors

Constructor	Description
CigarElement(int length, CigarOperator operator)

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
int	getLength()
CigarOperator	getOperator()
int	hashCode()
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Details

serialVersionUID

public static final long serialVersionUID

See Also:

• Constant Field Values

Constructor Details

CigarElement

public CigarElement(int length,
 CigarOperator operator)

Method Details

getLength

public int getLength()

getOperator

public CigarOperator getOperator()

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

toString

public String toString()

Overrides:

toString in class Object