Package htsjdk.samtools.filter

Class NotPrimaryAlignmentFilter

java.lang.Object

htsjdk.samtools.filter.SecondaryAlignmentFilter

htsjdk.samtools.filter.NotPrimaryAlignmentFilter

All Implemented Interfaces:

SamRecordFilter

@Deprecated
public class NotPrimaryAlignmentFilter
extends SecondaryAlignmentFilter

Deprecated.

use SecondaryAlignmentFilter instead.

Filter out SAMRecords with NotPrimaryAlignment flag set $Id$

Constructor Summary

Constructors

Constructor	Description
NotPrimaryAlignmentFilter()	Deprecated.

Method Summary

Methods inherited from class htsjdk.samtools.filter.SecondaryAlignmentFilter

filterOut, filterOut

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

NotPrimaryAlignmentFilter

public NotPrimaryAlignmentFilter()

Deprecated.