Serialized Form
toolbar
Toolbar toolbar
statusBar
Panel statusBar
progressBar
ProgressBar progressBar
statusLine
Label statusLine
firstTime
boolean firstTime
applet
Applet applet
classes
Vector<E> classes
exitWhenQuitting
boolean exitWhenQuitting
quitting
boolean quitting
keyPressedTime
long keyPressedTime
actionPerformedTime
long actionPerformedTime
lastKeyCommand
String lastKeyCommand
embedded
boolean embedded
windowClosed
boolean windowClosed
hotkey
boolean hotkey
style
int style
headSize
double headSize
doubleHeaded
boolean doubleHeaded
outline
boolean outline
points
float[] points
path
GeneralPath path
headShaftRatio
double headShaftRatio
xstart
double xstart
ystart
double ystart
aspectRatio
double aspectRatio
handle
int[] handle
numberField
Vector<E> numberField
stringField
Vector<E> stringField
checkbox
Vector<E> checkbox
choice
Vector<E> choice
slider
Vector<E> slider
radioButtonGroups
Vector<E> radioButtonGroups
textArea1
TextArea textArea1
textArea2
TextArea textArea2
defaultValues
Vector<E> defaultValues
defaultText
Vector<E> defaultText
defaultStrings
Vector<E> defaultStrings
theLabel
Component theLabel
cancel
Button cancel
okay
Button okay
no
Button no
help
Button help
okLabel
String okLabel
cancelLabel
String cancelLabel
helpLabel
String helpLabel
wasCanceled
boolean wasCanceled
wasOKed
boolean wasOKed
y
int y
nfIndex
int nfIndex
sfIndex
int sfIndex
cbIndex
int cbIndex
choiceIndex
int choiceIndex
textAreaIndex
int textAreaIndex
radioButtonIndex
int radioButtonIndex
grid
GridBagLayout grid
c
GridBagConstraints c
firstNumericField
boolean firstNumericField
firstSlider
boolean firstSlider
invalidNumber
boolean invalidNumber
errorMessage
String errorMessage
firstPaint
boolean firstPaint
labels
Hashtable<K,V> labels
macro
boolean macro
macroOptions
String macroOptions
topInset
int topInset
leftInset
int leftInset
bottomInset
int bottomInset
customInsets
boolean customInsets
sliderIndexes
int[] sliderIndexes
sliderScales
double[] sliderScales
previewCheckbox
Checkbox previewCheckbox
dialogListeners
Vector<E> dialogListeners
pfr
PlugInFilterRunner pfr
previewLabel
String previewLabel
recorderOn
boolean recorderOn
yesNoCancel
boolean yesNoCancel
echoChar
char echoChar
hideCancelButton
boolean hideCancelButton
centerDialog
boolean centerDialog
helpURL
String helpURL
yesLabel
String yesLabel
noLabel
String noLabel
smartRecording
boolean smartRecording
stats
ImageStatistics stats
histogram
long[] histogram
lut
LookUpTable lut
frame
Rectangle frame
list
Button list
save
Button save
copy
Button copy
log
Button log
live
Button live
rgb
Button rgb
value
Label value
count
Label count
decimalPlaces
int decimalPlaces
digits
int digits
newMaxCount
long newMaxCount
plotScale
int plotScale
logScale
boolean logScale
cal
Calibration cal
yMax
int yMax
srcImageID
int srcImageID
srcImp
ImagePlus srcImp
bgThread
Thread bgThread
doUpdate
boolean doUpdate
channel
int channel
blankLabel
String blankLabel
escapePressed
boolean escapePressed
imp
ImagePlus imp
imageUpdated
boolean imageUpdated
srcRect
Rectangle srcRect
imageWidth
int imageWidth
imageHeight
int imageHeight
xMouse
int xMouse
yMouse
int yMouse
showCursorStatus
boolean showCursorStatus
sx2
int sx2
sy2
int sy2
disablePopupMenu
boolean disablePopupMenu
font
Font font
labelRects
Rectangle[] labelRects
maxBoundsReset
boolean maxBoundsReset
overlay
Overlay overlay
showAllOverlay
Overlay showAllOverlay
defaultColor
Color defaultColor
resetMaxBoundsCount
int resetMaxBoundsCount
currentRoi
Roi currentRoi
mousePressedX
int mousePressedX
mousePressedY
int mousePressedY
mousePressedTime
long mousePressedTime
overOverlayLabel
boolean overOverlayLabel
ij
ImageJ ij
magnification
double magnification
dstWidth
int dstWidth
dstHeight
int dstHeight
xMouseStart
int xMouseStart
yMouseStart
int yMouseStart
xSrcStart
int xSrcStart
ySrcStart
int ySrcStart
flags
int flags
offScreenImage
Image offScreenImage
offScreenWidth
int offScreenWidth
offScreenHeight
int offScreenHeight
mouseExited
boolean mouseExited
customRoi
boolean customRoi
drawNames
boolean drawNames
paintPending
AtomicBoolean paintPending
scaleToFit
boolean scaleToFit
painted
boolean painted
firstFrame
long firstFrame
frames
int frames
fps
int fps
count
int count
img
Image img
composite
Composite composite
opacity
double opacity
angle
double angle
zeroTransparent
boolean zeroTransparent
imp
ImagePlus imp
ij
ImageJ ij
ic
ImageCanvas ic
initialMagnification
double initialMagnification
newWidth
int newWidth
newHeight
int newHeight
closed
boolean closed
newCanvas
boolean newCanvas
unzoomWhenMinimizing
boolean unzoomWhenMinimizing
maxWindowBounds
Rectangle maxWindowBounds
maxBounds
Rectangle maxBounds
setMaxBoundsTime
long setMaxBoundsTime
textGap
int textGap
running
boolean running
- This variable is set false if the user presses the escape key or closes the window.
running2
boolean running2
- This variable is set false if the user clicks in this
window, presses the escape key, or closes the window.
x1
int x1
y1
int y1
x2
int x2
y2
int y2
x1d
double x1d
y1d
double y1d
x2d
double x2d
y2d
double y2d
x1R
double x1R
y1R
double y1R
x2R
double x2R
y2R
double y2R
xHandleOffset
double xHandleOffset
yHandleOffset
double yHandleOffset
startxd
double startxd
startyd
double startyd
drawOffset
boolean drawOffset
dragged
boolean dragged
mouseUpCount
int mouseUpCount
button
Button button
label
MultiLineLabel label
escapePressed
boolean escapePressed
lines
String[] lines
num_lines
int num_lines
margin_width
int margin_width
margin_height
int margin_height
line_height
int line_height
line_ascent
int line_ascent
line_widths
int[] line_widths
min_width
int min_width
max_width
int max_width
list
Button list
save
Button save
copy
Button copy
live
Button live
coordinates
Label coordinates
defaultDigits
int defaultDigits
markSize
int markSize
plot
Plot plot
blankLabel
String blankLabel
plotMaker
PlotMaker plotMaker
srcImp
ImagePlus srcImp
bgThread
Thread bgThread
doUpdate
boolean doUpdate
saveMag
double saveMag
hideLabels
boolean hideLabels
maxPoints
int maxPoints
xp
int[] xp
yp
int[] yp
xpf
float[] xpf
ypf
float[] ypf
xp2
int[] xp2
yp2
int[] yp2
nPoints
int nPoints
xSpline
float[] xSpline
ySpline
float[] ySpline
splinePoints
int splinePoints
clip
Rectangle clip
angle1
double angle1
degrees
double degrees
xClipMin
int xClipMin
yClipMin
int yClipMin
xClipMax
int xClipMax
yClipMax
int yClipMax
userCreated
boolean userCreated
subPixel
boolean subPixel
drawOffset
boolean drawOffset
mouseUpTime
long mouseUpTime
canvasWidth
int canvasWidth
canvasHeight
int canvasHeight
x
int x
y
int y
width
int width
height
int height
percent
double percent
lastTime
long lastTime
showBar
boolean showBar
batchMode
boolean batchMode
barColor
Color barColor
fillColor
Color fillColor
backgroundColor
Color backgroundColor
frameBrighter
Color frameBrighter
frameDarker
Color frameDarker
startX
int startX
startY
int startY
x
int x
y
int y
width
int width
height
int height
startXD
double startXD
startYD
double startYD
bounds
Rectangle2D.Double bounds
activeHandle
int activeHandle
state
int state
modState
int modState
cornerDiameter
int cornerDiameter
type
int type
xMax
int xMax
yMax
int yMax
imp
ImagePlus imp
imageID
int imageID
ic
ImageCanvas ic
oldX
int oldX
oldY
int oldY
oldWidth
int oldWidth
oldHeight
int oldHeight
clipX
int clipX
clipY
int clipY
clipWidth
int clipWidth
clipHeight
int clipHeight
clipboard
ImagePlus clipboard
constrain
boolean constrain
center
boolean center
aspect
boolean aspect
updateFullWindow
boolean updateFullWindow
mag
double mag
asp_bk
double asp_bk
cachedMask
ImageProcessor cachedMask
handleColor
Color handleColor
strokeColor
Color strokeColor
instanceColor
Color instanceColor
fillColor
Color fillColor
stroke
BasicStroke stroke
nonScalable
boolean nonScalable
overlay
boolean overlay
wideLine
boolean wideLine
ignoreClipRect
boolean ignoreClipRect
name
String name
position
int position
channel
int channel
slice
int slice
frame
int frame
prototypeOverlay
Overlay prototypeOverlay
subPixel
boolean subPixel
activeOverlayRoi
boolean activeOverlayRoi
props
Properties props
dontSave
Button dontSave
cancel
Button cancel
save
Button save
cancelPressed
boolean cancelPressed
savePressed
boolean savePressed
bar
Scrollbar bar
icon
ij.gui.ScrollbarWithLabel.Icon icon
stackWindow
StackWindow stackWindow
shape
Shape shape
- The
java.awt.Shape
encapsulated by this object.
maxerror
double maxerror
- The instance value of the maximum tolerance (MAXERROR) allowed in calculating the
length of the curve segments of this ROI's shape.
flatness
double flatness
- The instance value of the coefficient (FLATNESS) used to
obtain a flattened version of this ROI's shape.
maxPoly
int maxPoly
- The instance value of MAXPOLY.
flatten
boolean flatten
- If true then methods that manipulate this ROI's shape will work on
a flattened version of the shape.
forceTrace
boolean forceTrace
- Flag which specifies how Roi objects will be constructed from closed (sub)paths having more than
MAXPOLY
and composed exclusively of line segments.
If true
then (sub)path will be parsed into a
Roi.TRACED_ROI
; else, into a Roi.FREEROI
.
forceAngle
boolean forceAngle
- Flag which specifies if Roi objects constructed from open (sub)paths composed of only two line segments
will be of type
Roi.ANGLE
.
If true
then (sub)path will be parsed into a Roi.ANGLE
;
else, into a Roi.POLYLINE
.
savedRois
Vector<E> savedRois
sliceSelector
Scrollbar sliceSelector
cSelector
ScrollbarWithLabel cSelector
zSelector
ScrollbarWithLabel zSelector
tSelector
ScrollbarWithLabel tSelector
thread
Thread thread
done
boolean done
slice
int slice
animationSelector
ScrollbarWithLabel animationSelector
hyperStack
boolean hyperStack
nChannels
int nChannels
nSlices
int nSlices
nFrames
int nFrames
c
int c
z
int z
t
int t
theText
String[] theText
instanceFont
Font instanceFont
justification
int justification
antialiased
boolean antialiased
previousMag
double previousMag
firstChar
boolean firstChar
firstMouseUp
boolean firstMouseUp
cline
int cline
drawStringMode
boolean drawStringMode
angle
double angle
ps
Dimension ps
down
boolean[] down
previous
int previous
x
int x
y
int y
xOffset
int xOffset
yOffset
int yOffset
mouseDownTime
long mouseDownTime
g
Graphics g
mpPrevious
int mpPrevious
names
String[] names
icons
String[] icons
tools
PlugInTool[] tools
menus
PopupMenu[] menus
nExtraTools
int nExtraTools
macroInstaller
MacroInstaller macroInstaller
addingSingleTool
boolean addingSingleTool
installingStartupTool
boolean installingStartupTool
doNotSavePrefs
boolean doNotSavePrefs
pc
int pc
icon
String icon
startupTime
int startupTime
rectPopup
PopupMenu rectPopup
ovalPopup
PopupMenu ovalPopup
pointPopup
PopupMenu pointPopup
linePopup
PopupMenu linePopup
switchPopup
PopupMenu switchPopup
rectItem
CheckboxMenuItem rectItem
roundRectItem
CheckboxMenuItem roundRectItem
ovalItem
CheckboxMenuItem ovalItem
ellipseItem
CheckboxMenuItem ellipseItem
brushItem
CheckboxMenuItem brushItem
pointItem
CheckboxMenuItem pointItem
multiPointItem
CheckboxMenuItem multiPointItem
straightLineItem
CheckboxMenuItem straightLineItem
polyLineItem
CheckboxMenuItem polyLineItem
freeLineItem
CheckboxMenuItem freeLineItem
arrowItem
CheckboxMenuItem arrowItem
currentSet
String currentSet
lineType
int lineType
gray
Color gray
brighter
Color brighter
darker
Color darker
evenDarker
Color evenDarker
triangleColor
Color triangleColor
toolColor
Color toolColor
trim
int trim
button
Button button
label
MultiLineLabel label
escPressed
boolean escPressed
yesB
Button yesB
noB
Button noB
cancelB
Button cancelB
cancelPressed
boolean cancelPressed
yesPressed
boolean yesPressed
firstPaint
boolean firstPaint
choice
Choice choice
checkbox
Checkbox[] checkbox
moreButton
Button moreButton
id
int id
pm
PopupMenu pm
flag
boolean flag
colorSpace
int colorSpace
thread
Thread thread
plot
ij.plugin.frame.ColorThresholder.BandPlot plot
splot
ij.plugin.frame.ColorThresholder.BandPlot splot
bplot
ij.plugin.frame.ColorThresholder.BandPlot bplot
sliderRange
int sliderRange
panel
Panel panel
panelt
Panel panelt
originalB
Button originalB
filteredB
Button filteredB
stackB
Button stackB
helpB
Button helpB
sampleB
Button sampleB
resetallB
Button resetallB
newB
Button newB
macroB
Button macroB
selectB
Button selectB
bandPassH
Checkbox bandPassH
bandPassS
Checkbox bandPassS
bandPassB
Checkbox bandPassB
darkBackground
Checkbox darkBackground
colourMode
CheckboxGroup colourMode
colorSpaceChoice
Choice colorSpaceChoice
methodChoice
Choice methodChoice
modeChoice
Choice modeChoice
previousImageID
int previousImageID
previousSlice
int previousSlice
ij
ImageJ ij
minHue
int minHue
minSat
int minSat
minBri
int minBri
maxHue
int maxHue
maxSat
int maxSat
maxBri
int maxBri
minSlider
Scrollbar minSlider
maxSlider
Scrollbar maxSlider
minSlider2
Scrollbar minSlider2
maxSlider2
Scrollbar maxSlider2
minSlider3
Scrollbar minSlider3
maxSlider3
Scrollbar maxSlider3
label1
Label label1
label2
Label label2
label3
Label label3
label4
Label label4
label5
Label label5
label6
Label label6
labelh
Label labelh
labels
Label labels
labelb
Label labelb
labelf
Label labelf
done
boolean done
hSource
byte[] hSource
sSource
byte[] sSource
bSource
byte[] bSource
applyingStack
boolean applyingStack
numSlices
int numSlices
stack
ImageStack stack
width
int width
height
int height
numPixels
int numPixels
plot
ij.plugin.frame.ContrastPlot plot
thread
Thread thread
minSliderValue
int minSliderValue
maxSliderValue
int maxSliderValue
brightnessValue
int brightnessValue
contrastValue
int contrastValue
sliderRange
int sliderRange
doAutoAdjust
boolean doAutoAdjust
doReset
boolean doReset
doSet
boolean doSet
doApplyLut
boolean doApplyLut
panel
Panel panel
tPanel
Panel tPanel
autoB
Button autoB
resetB
Button resetB
setB
Button setB
applyB
Button applyB
previousImageID
int previousImageID
previousType
int previousType
previousSlice
int previousSlice
previousSnapshot
Object previousSnapshot
ij
ImageJ ij
min
double min
max
double max
previousMin
double previousMin
previousMax
double previousMax
defaultMin
double defaultMin
defaultMax
double defaultMax
contrast
int contrast
brightness
int brightness
RGBImage
boolean RGBImage
minSlider
Scrollbar minSlider
maxSlider
Scrollbar maxSlider
contrastSlider
Scrollbar contrastSlider
brightnessSlider
Scrollbar brightnessSlider
minLabel
Label minLabel
maxLabel
Label maxLabel
windowLabel
Label windowLabel
levelLabel
Label levelLabel
done
boolean done
autoThreshold
int autoThreshold
gridbag
GridBagLayout gridbag
c
GridBagConstraints c
y
int y
windowLevel
boolean windowLevel
balance
boolean balance
monoFont
Font monoFont
sanFont
Font sanFont
channels
int channels
choice
Choice choice
ta
TextArea ta
path
String path
changes
boolean changes
fileMenu
Menu fileMenu
editMenu
Menu editMenu
p
Properties p
macroStarts
int[] macroStarts
macroNames
String[] macroNames
mb
MenuBar mb
macrosMenu
Menu macrosMenu
nMacros
int nMacros
pgm
Program pgm
eventCount
int eventCount
shortcutsInUse
String shortcutsInUse
inUseCount
int inUseCount
installer
MacroInstaller installer
dontShowWindow
boolean dontShowWindow
sizes
int[] sizes
fontSize
int fontSize
monospaced
CheckboxMenuItem monospaced
isMacroWindow
boolean isMacroWindow
debugStart
int debugStart
debugEnd
int debugEnd
step
boolean step
previousLine
int previousLine
runToLine
int runToLine
fixedLineEndings
boolean fixedLineEndings
downloadUrl
String downloadUrl
downloading
boolean downloading
functionFinder
FunctionFinder functionFinder
fit
Choice fit
doIt
Button doIt
open
Button open
apply
Button apply
settings
Checkbox settings
fitTypeStr
String fitTypeStr
textArea
TextArea textArea
dx
double[] dx
dy
double[] dy
x
double[] x
y
double[] y
sliderRange
int sliderRange
slider
Scrollbar slider
value
int value
setText
boolean setText
thread
Thread thread
done
boolean done
tf
TextField tf
checkbox
Checkbox checkbox
image
Image image
g
Graphics2D g
frames
int frames
mem
double[] mem
index
int index
value
long value
defaultMax
double defaultMax
max
double max
maxMemory
long maxMemory
panel
Panel panel
pasteMode
Choice pasteMode
title
String title
title
String title
mode
Choice mode
makeMacro
Button makeMacro
help
Button help
fileName
TextField fileName
fitTypeStr
String fitTypeStr
panel
Panel panel
list
JList list
listModel
DefaultListModel listModel
rois
Hashtable<K,V> rois
canceled
boolean canceled
macro
boolean macro
ignoreInterrupts
boolean ignoreInterrupts
pm
PopupMenu pm
moreButton
Button moreButton
colorButton
Button colorButton
showAllCheckbox
Checkbox showAllCheckbox
labelsCheckbox
Checkbox labelsCheckbox
prevID
int prevID
noUpdateMode
boolean noUpdateMode
defaultLineWidth
int defaultLineWidth
defaultColor
Color defaultColor
firstTime
boolean firstTime
selectedIndexes
int[] selectedIndexes
appendResults
boolean appendResults
mmResults
ResultsTable mmResults
imageID
int imageID
vwins
Vector<E> vwins
- Indices of synchronized image windows are maintained in this Vector.
oldX
int oldX
oldY
int oldY
x
int x
y
int y
wList
List wList
- List of currently displayed windows retrieved from ImageJ
window manager.
panel
Panel panel
- Panel for GUI
cCursor
Checkbox cCursor
- Checkboxes for user control.
cSlice
Checkbox cSlice
- Checkboxes for user control.
cChannel
Checkbox cChannel
- Checkboxes for user control.
cFrame
Checkbox cFrame
- Checkboxes for user control.
cCoords
Checkbox cCoords
- Checkboxes for user control.
cScaling
Checkbox cScaling
- Checkboxes for user control.
bSyncAll
Button bSyncAll
- Buttons for user control.
bUnsyncAll
Button bUnsyncAll
- Buttons for user control.
vListMap
Vector<E> vListMap
- Hashtable to map list ids to image window ids.
ijInstance
ImageJ ijInstance
- reference to current instance of ImageJ (to avoid repeated IJ.getInstance() s)
currentMag
double currentMag
currentSrcRect
Rectangle currentSrcRect
plot
ij.plugin.frame.ThresholdPlot plot
thread
Thread thread
minValue
int minValue
maxValue
int maxValue
sliderRange
int sliderRange
doAutoAdjust
boolean doAutoAdjust
doReset
boolean doReset
doApplyLut
boolean doApplyLut
doStateChange
boolean doStateChange
doSet
boolean doSet
panel
Panel panel
autoB
Button autoB
resetB
Button resetB
applyB
Button applyB
setB
Button setB
previousImageID
int previousImageID
previousImageType
int previousImageType
previousRoiHashCode
int previousRoiHashCode
previousMin
double previousMin
previousMax
double previousMax
previousSlice
int previousSlice
imageWasUpdated
boolean imageWasUpdated
ij
ImageJ ij
minThreshold
double minThreshold
maxThreshold
double maxThreshold
minSlider
Scrollbar minSlider
maxSlider
Scrollbar maxSlider
label1
Label label1
label2
Label label2
percentiles
Label percentiles
done
boolean done
lutColor
int lutColor
methodChoice
Choice methodChoice
modeChoice
Choice modeChoice
darkBackground
Checkbox darkBackground
stackHistogram
Checkbox stackHistogram
firstActivation
boolean firstActivation
iGridWidth
int iGridWidth
iGridHeight
int iGridHeight
iX
int iX
iY
int iY
sColHead
String[] sColHead
vData
Vector<E> vData
iColWidth
int[] iColWidth
iColCount
int iColCount
iRowCount
int iRowCount
iRowHeight
int iRowHeight
iFirstRow
int iFirstRow
sbHoriz
Scrollbar sbHoriz
sbVert
Scrollbar sbVert
iSbWidth
int iSbWidth
iSbHeight
int iSbHeight
bDrag
boolean bDrag
iXDrag
int iXDrag
iColDrag
int iColDrag
headings
boolean headings
title
String title
labels
String labels
keyListener
KeyListener keyListener
resizeCursor
Cursor resizeCursor
defaultCursor
Cursor defaultCursor
selStart
int selStart
selEnd
int selEnd
selOrigin
int selOrigin
selLine
int selLine
tc
ij.text.TextCanvas tc
pm
PopupMenu pm
columnsManuallyAdjusted
boolean columnsManuallyAdjusted
mouseDownTime
long mouseDownTime
filePath
String filePath
rt
ResultsTable rt
unsavedLines
boolean unsavedLines
searchString
String searchString
fileMenu
Menu fileMenu
menusExtended
boolean menusExtended
textPanel
TextPanel textPanel
antialiased
CheckboxMenuItem antialiased
sizes
int[] sizes
fontSize
int fontSize
mb
MenuBar mb
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