Package 

Class HaplotypeEdge

    • Nested Class Summary

      Nested Classes 
      Modifier and Type Class Description
    • Field Summary

      Fields 
      Modifier and Type Field Description
    • Enum Constant Summary

      Enum Constants 
      Enum Constant Description
    • Method Summary

      Modifier and Type Method Description
      HaplotypeNode leftHapNode() HaplotypeNode to the left of the current edge.
      HaplotypeNode rightHapNode() HaplotypeNode to the right of the current edge
      double edgeProbability() Probability that the node to the right of this edge rightHapNode is the next HaplotypeNode when traversing the graph from left to right.
      String toString()
      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
    • Constructor Detail

      • HaplotypeEdge

        HaplotypeEdge(HaplotypeNode leftHapNode, HaplotypeNode rightHapNode, double edgeProbability)
        Constructor
        Parameters:
        leftHapNode - left node
        rightHapNode - right node
        edgeProbability - probability right node is next in sequence starting from left node