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- All Implemented Interfaces:
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java.lang.Runnable
,net.maizegenetics.plugindef.Plugin
,net.maizegenetics.plugindef.PluginListener
,net.maizegenetics.util.ProgressListener
public class SplitVCFIntoIntervalsPlugin extends AbstractPlugin
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Field Summary
Fields Modifier and Type Field Description public final static String
DEFAULT_CITATION
public final static String
POSITION_LIST_NONE
public final static String
TAXA_LIST_NONE
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Constructor Summary
Constructors Constructor Description SplitVCFIntoIntervalsPlugin(Frame parentFrame, boolean isInteractive)
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Method Summary
Modifier and Type Method Description DataSet
processData(DataSet input)
ImageIcon
getIcon()
String
getButtonName()
String
getToolTipText()
String
input()
Input VCF file SplitVCFIntoIntervalsPlugin
input(String value)
Set Input. String
intervalFile()
Intervals file SplitVCFIntoIntervalsPlugin
intervalFile(String value)
Set Intervals. -
Methods inherited from class net.maizegenetics.plugindef.AbstractPlugin
addListener, cancel, convert, dataSetReturned, getCitation, getInputs, getListeners, getMenu, getPanel, getParameter, getParentFrame, getUsage, getUsageHTML, hasListeners, isInteractive, isPluginParameter, performFunction, pluginDescription, pluginParameters, pluginUserManualURL, progress, receiveInput, reverseTrace, run, setConfigParameters, setParameter, setParameters, setParametersToDefault, setThreaded, trace, usageParameters, wasCancelled
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Methods inherited from class net.maizegenetics.plugindef.Plugin
getPluginInstance, isPlugin
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Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
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Constructor Detail
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SplitVCFIntoIntervalsPlugin
SplitVCFIntoIntervalsPlugin(Frame parentFrame, boolean isInteractive)
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Method Detail
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processData
DataSet processData(DataSet input)
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getButtonName
String getButtonName()
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getToolTipText
String getToolTipText()
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input
SplitVCFIntoIntervalsPlugin input(String value)
Set Input. Input VCF file
- Parameters:
value
- Input
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intervalFile
String intervalFile()
Intervals file
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intervalFile
SplitVCFIntoIntervalsPlugin intervalFile(String value)
Set Intervals. Intervals file
- Parameters:
value
- Intervals
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