net.maizegenetics.analysis.numericaltransform

Class ImputationPlugin

java.lang.Object

net.maizegenetics.plugindef.AbstractPlugin

net.maizegenetics.analysis.numericaltransform.ImputationPlugin

All Implemented Interfaces:

Runnable, Plugin, PluginListener, ProgressListener

public class ImputationPlugin
extends AbstractPlugin

Field Summary

Fields inherited from class net.maizegenetics.plugindef.AbstractPlugin

DEFAULT_CITATION, POSITION_LIST_NONE, TAXA_LIST_NONE

Constructor Summary

Constructors

Constructor and Description
ImputationPlugin(Frame parentFrame, boolean isInteractive) Creates a new instance of the ImputationPlugin

Method Summary

Modifier and Type	Method and Description
Boolean	by_mean()
ImputationPlugin	by_mean(Boolean value)
net.maizegenetics.analysis.numericaltransform.ImputationPlugin.distanceChoice	distance_choice()
ImputationPlugin	distance_choice(net.maizegenetics.analysis.numericaltransform.ImputationPlugin.distanceChoice value)
String	getButtonName() Button name for this plugin to be used in buttons, etc.
ImageIcon	getIcon() Icon for this plugin to be used in buttons, etc.
String	getToolTipText() Tool Tip Text for this plugin
Integer	nearest_neighbors()
ImputationPlugin	nearest_neighbors(Integer value)
String	pluginDescription() Returns description of the plugin.
DataSet	processData(DataSet input) For the new Generic Plugin Parameter design, performFunction() will automatically call this.

Methods inherited from class net.maizegenetics.plugindef.AbstractPlugin

addListener, cancel, convert, dataSetReturned, getCitation, getInputs, getMenu, getPanel, getParameter, getParameter, getParentFrame, getUsage, getUsageHTML, isInteractive, performFunction, pluginUserManualURL, progress, progress, receiveInput, reverseTrace, run, setConfigParameters, setParameter, setParameter, setParameter, setParameters, setParametersToDefault, setThreaded, trace, wasCancelled

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.maizegenetics.plugindef.Plugin

getPluginInstance, getPluginInstance, isPlugin

Constructor Detail

ImputationPlugin

public ImputationPlugin(Frame parentFrame,
                        boolean isInteractive)

Creates a new instance of the ImputationPlugin

Method Detail

processData

public DataSet processData(DataSet input)

Description copied from interface: Plugin

For the new Generic Plugin Parameter design, performFunction() will automatically call this. Therefore, coders of Plugins should override this instead of performFunction().

Specified by:

processData in interface Plugin

Overrides:

processData in class AbstractPlugin

Parameters:

input - input

Returns:

resulting data set or null.

pluginDescription

public String pluginDescription()

Description copied from interface: Plugin

Returns description of the plugin.

Specified by:

pluginDescription in interface Plugin

Overrides:

pluginDescription in class AbstractPlugin

Returns:

description

getIcon

public ImageIcon getIcon()

Description copied from interface: Plugin

Icon for this plugin to be used in buttons, etc.

Returns:

ImageIcon

getButtonName

public String getButtonName()

Description copied from interface: Plugin

Button name for this plugin to be used in buttons, etc.

Returns:

String

getToolTipText

public String getToolTipText()

Description copied from interface: Plugin

Tool Tip Text for this plugin

Returns:

String

distance_choice

public net.maizegenetics.analysis.numericaltransform.ImputationPlugin.distanceChoice distance_choice()

distance_choice

public ImputationPlugin distance_choice(net.maizegenetics.analysis.numericaltransform.ImputationPlugin.distanceChoice value)

by_mean

public Boolean by_mean()

by_mean

public ImputationPlugin by_mean(Boolean value)

nearest_neighbors

public Integer nearest_neighbors()

nearest_neighbors

public ImputationPlugin nearest_neighbors(Integer value)