net.maizegenetics.analysis.popgen

Class LinkageDiseqDisplayPlugin

java.lang.Object

net.maizegenetics.plugindef.AbstractPlugin

net.maizegenetics.analysis.chart.AbstractDisplayPlugin

net.maizegenetics.analysis.popgen.LinkageDiseqDisplayPlugin

All Implemented Interfaces:

Runnable, Plugin, PluginListener, ProgressListener

public class LinkageDiseqDisplayPlugin
extends AbstractDisplayPlugin

Author:

Ed Buckler

Nested Class Summary

Nested classes/interfaces inherited from class net.maizegenetics.analysis.chart.AbstractDisplayPlugin

AbstractDisplayPlugin.Outformat

Field Summary

Fields inherited from class net.maizegenetics.plugindef.AbstractPlugin

DEFAULT_CITATION, POSITION_LIST_NONE, TAXA_LIST_NONE

Constructor Summary

Constructors

Constructor and Description
LinkageDiseqDisplayPlugin(Frame parentFrame, boolean isInteractive) Creates a new instance of LinkageDiseqDisplayPlugin

Method Summary

Modifier and Type	Method and Description
String	getButtonName() Button name for this plugin to be used in buttons, etc.
ImageIcon	getIcon() Icon for this plugin to be used in buttons, etc.
int	getLowerCorner()
String	getToolTipText() Tool Tip Text for this plugin
int	getUpperCorner()
boolean	isBlockSchematic()
boolean	isChromosomalView()
DataSet	performFunction(DataSet input) Performs function of this plugin.
void	setBlockSchematic(boolean blockSchematic)
void	setChromosomalView(boolean chromosomalView)
void	setLowerCorner(int lowerCorner)
void	setShowLabels(boolean includeLabels)
void	setUpperCorner(int upperCorner)

Methods inherited from class net.maizegenetics.analysis.chart.AbstractDisplayPlugin

getImageHeight, getImageWidth, getOutformat, getPossibleGraphicOutFormats, getSaveFile, saveDataToFile, saveDataToFile, setImageSize, setOutformat, setSaveFile, setSaveFile

Methods inherited from class net.maizegenetics.plugindef.AbstractPlugin

addListener, cancel, convert, dataSetReturned, getCitation, getInputs, getMenu, getPanel, getParameter, getParameter, getParentFrame, getUsage, getUsageHTML, isInteractive, pluginDescription, pluginUserManualURL, processData, progress, progress, receiveInput, reverseTrace, run, setConfigParameters, setParameter, setParameter, setParameter, setParameters, setParametersToDefault, setThreaded, trace, wasCancelled

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.maizegenetics.plugindef.Plugin

getPluginInstance, getPluginInstance, isPlugin

Constructor Detail

LinkageDiseqDisplayPlugin

public LinkageDiseqDisplayPlugin(Frame parentFrame,
                                 boolean isInteractive)

Creates a new instance of LinkageDiseqDisplayPlugin

Method Detail

performFunction

public DataSet performFunction(DataSet input)

Description copied from interface: Plugin

Performs function of this plugin.

Specified by:

performFunction in interface Plugin

Overrides:

performFunction in class AbstractPlugin

Parameters:

input - input

Returns:

resulting data set or null.

getUpperCorner

public int getUpperCorner()

setUpperCorner

public void setUpperCorner(int upperCorner)

getLowerCorner

public int getLowerCorner()

setLowerCorner

public void setLowerCorner(int lowerCorner)

isBlockSchematic

public boolean isBlockSchematic()

setBlockSchematic

public void setBlockSchematic(boolean blockSchematic)

setShowLabels

public void setShowLabels(boolean includeLabels)

isChromosomalView

public boolean isChromosomalView()

setChromosomalView

public void setChromosomalView(boolean chromosomalView)

getIcon

public ImageIcon getIcon()

Icon for this plugin to be used in buttons, etc.

Returns:

ImageIcon

getButtonName

public String getButtonName()

Button name for this plugin to be used in buttons, etc.

Returns:

String

getToolTipText

public String getToolTipText()

Tool Tip Text for this plugin

Returns:

String