Uses of Class
net.maizegenetics.dna.snp.GenotypeTable.GENOTYPE_TABLE_COMPONENT

Packages that use GenotypeTable.GENOTYPE_TABLE_COMPONENT

Package	Description
net.maizegenetics.analysis.association	Approaches for conducting GWAS including GLM and MLM approaches
net.maizegenetics.analysis.modelfitter	The modelfitter package contains classes that use various methods to fit multiple variant sites to a GWAS model.
net.maizegenetics.dna.snp	Data structures for holding SNP and indel variation across taxa (samples) and genomic positions.

Uses of GenotypeTable.GENOTYPE_TABLE_COMPONENT in net.maizegenetics.analysis.association

Methods in net.maizegenetics.analysis.association that return GenotypeTable.GENOTYPE_TABLE_COMPONENT

Modifier and Type	Method and Description
GenotypeTable.GENOTYPE_TABLE_COMPONENT	EqtlAssociationPlugin.genotypeComponent() If the genotype table contains more than one type of genotype data, choose the type to use for the analysis.
GenotypeTable.GENOTYPE_TABLE_COMPONENT	FastMultithreadedAssociationPlugin.genotypeTable() If the genotype table contains more than one type of genotype data, choose the type to use for the analysis.
GenotypeTable.GENOTYPE_TABLE_COMPONENT	FixedEffectLMPlugin.genotypeTable() If the genotype table contains more than one type of genotype data, choose the type to use for the analysis.

Methods in net.maizegenetics.analysis.association with parameters of type GenotypeTable.GENOTYPE_TABLE_COMPONENT

Modifier and Type	Method and Description
EqtlAssociationPlugin	EqtlAssociationPlugin.genotypeComponent(GenotypeTable.GENOTYPE_TABLE_COMPONENT value) Set Genotype Component.
FastMultithreadedAssociationPlugin	FastMultithreadedAssociationPlugin.genotypeTable(GenotypeTable.GENOTYPE_TABLE_COMPONENT value) Set Genotype Component.
FixedEffectLMPlugin	FixedEffectLMPlugin.genotypeTable(GenotypeTable.GENOTYPE_TABLE_COMPONENT value) Set Genotype Component.

Uses of GenotypeTable.GENOTYPE_TABLE_COMPONENT in net.maizegenetics.analysis.modelfitter

Methods in net.maizegenetics.analysis.modelfitter that return GenotypeTable.GENOTYPE_TABLE_COMPONENT

Modifier and Type	Method and Description
GenotypeTable.GENOTYPE_TABLE_COMPONENT	StepwiseAdditiveModelFitterPlugin.genotypeTable() If the genotype table contains more than one type of genotype data, choose the type to use for the analysis.

Methods in net.maizegenetics.analysis.modelfitter with parameters of type GenotypeTable.GENOTYPE_TABLE_COMPONENT

Modifier and Type	Method and Description
StepwiseAdditiveModelFitterPlugin	StepwiseAdditiveModelFitterPlugin.genotypeTable(GenotypeTable.GENOTYPE_TABLE_COMPONENT value) Set Genotype Component.

Uses of GenotypeTable.GENOTYPE_TABLE_COMPONENT in net.maizegenetics.dna.snp

Methods in net.maizegenetics.dna.snp that return GenotypeTable.GENOTYPE_TABLE_COMPONENT

Modifier and Type	Method and Description
static GenotypeTable.GENOTYPE_TABLE_COMPONENT	GenotypeTable.GENOTYPE_TABLE_COMPONENT.valueOf(String name) Returns the enum constant of this type with the specified name.
static GenotypeTable.GENOTYPE_TABLE_COMPONENT[]	GenotypeTable.GENOTYPE_TABLE_COMPONENT.values() Returns an array containing the constants of this enum type, in the order they are declared.