Uses of Class
net.maizegenetics.dna.snp.io.BuilderFromVCFUsingHTSJDK

Packages that use BuilderFromVCFUsingHTSJDK

Package	Description
net.maizegenetics.dna.snp.io	Support for reading and writing GenotypeTables to various file formats.

Uses of BuilderFromVCFUsingHTSJDK in net.maizegenetics.dna.snp.io

Methods in net.maizegenetics.dna.snp.io that return BuilderFromVCFUsingHTSJDK

Modifier and Type	Method and Description
static BuilderFromVCFUsingHTSJDK	BuilderFromVCFUsingHTSJDK.instance(String vcf)
static BuilderFromVCFUsingHTSJDK	BuilderFromVCFUsingHTSJDK.instance(htsjdk.variant.vcf.VCFHeader header, Iterator<htsjdk.variant.variantcontext.VariantContext> variants)
static BuilderFromVCFUsingHTSJDK	BuilderFromVCFUsingHTSJDK.instance(htsjdk.variant.vcf.VCFHeader header, List<htsjdk.variant.variantcontext.VariantContext> variants)
BuilderFromVCFUsingHTSJDK	BuilderFromVCFUsingHTSJDK.keepDepth(boolean keep)
BuilderFromVCFUsingHTSJDK	BuilderFromVCFUsingHTSJDK.progressListener(ProgressListener listener)