net.maizegenetics.phenotype

Class GenotypePhenotypeBuilder

java.lang.Object

net.maizegenetics.phenotype.GenotypePhenotypeBuilder

public class GenotypePhenotypeBuilder
extends Object

Author:

Peter Bradbury

Constructor Summary

Constructors

Constructor and Description
GenotypePhenotypeBuilder()

Method Summary

Modifier and Type	Method and Description
GenotypePhenotype	build()
GenotypePhenotypeBuilder	genotype(GenotypeTable theGenotype)
GenotypePhenotypeBuilder	intersect() Indicates that an intersect join should be performed.
GenotypePhenotypeBuilder	name(String name)
GenotypePhenotypeBuilder	phenotype(Phenotype thePhenotype)
GenotypePhenotypeBuilder	union() Indicates that a union join should be performed.

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GenotypePhenotypeBuilder

public GenotypePhenotypeBuilder()

Method Detail

phenotype

public GenotypePhenotypeBuilder phenotype(Phenotype thePhenotype)

Parameters:

thePhenotype - the Phenotype to be used by this builder

Returns:

this builder

genotype

public GenotypePhenotypeBuilder genotype(GenotypeTable theGenotype)

Parameters:

theGenotype - the GenotypeTable to be used by this builder

Returns:

this builder

union

public GenotypePhenotypeBuilder union()

Indicates that a union join should be performed. The GenotypeTable and Phenotype will be used as is. If union is not specified, an intersect join will be performed by default

Returns:

this builder

intersect

public GenotypePhenotypeBuilder intersect()

Indicates that an intersect join should be performed. If necessary the GenotypeTable and Phenotype will be filtered before building the GenotypePhenotype. The filtered tables will have only the taxa common to both.

Returns:

this builder

name

public GenotypePhenotypeBuilder name(String name)

Parameters:

name - the name that will be used for the resulting GenotypePhenotype

Returns:

this builder

build

public GenotypePhenotype build()

Returns:

a GenotypePhenotype built using the supplied objects and parameters