ADAM2Vcf
cli
ADAM2VcfArgs
cli
ADAMMain
cli
Adam2Fastq
cli
Adam2FastqArgs
cli
AlleleCount
cli
AlleleCountArgs
cli
AlleleCountHelper
cli
accessControl
PluginExecutorArgs
adam
bdgenomics
adamFile
ADAM2VcfArgs AlleleCountArgs
adamInputPath
CalculateDepthArgs
apply
ADAM2Vcf Adam2Fastq AlleleCount BuildInformation CalculateDepth CountContigKmers CountReadKmers Fasta2ADAM Features2ADAM FlagStat Flatten ListDict PluginExecutor PrintADAM PrintGenes PrintTags Transform Vcf2ADAM VcfAnnotation2ADAM View WigFix2Bed
applyFilters
View
args
ADAM2Vcf Adam2Fastq AlleleCount CalculateDepth CountContigKmers CountReadKmers Fasta2ADAM Features2ADAM FlagStat Flatten ListDict PluginExecutor PrintADAM PrintGenes PrintTags Transform Vcf2ADAM VcfAnnotation2ADAM View WigFix2Bed
asSingleFile
TransformArgs ViewArgs