ADAM2Vcf
cli
ADAM2VcfArgs
cli
ADAMMain
cli
Adam2Fastq
cli
Adam2FastqArgs
cli
AlleleCount
cli
AlleleCountArgs
cli
AlleleCountHelper
cli
accessControl
PluginExecutorArgs
adam
bdgenomics
adamFile
ADAM2VcfArgs
AlleleCountArgs
adamInputPath
CalculateDepthArgs
apply
ADAM2Vcf
Adam2Fastq
AlleleCount
BuildInformation
CalculateDepth
CountContigKmers
CountReadKmers
Fasta2ADAM
Features2ADAM
FlagStat
Flatten
ListDict
PluginExecutor
PrintADAM
PrintGenes
PrintTags
Transform
Vcf2ADAM
VcfAnnotation2ADAM
View
WigFix2Bed
applyFilters
View
args
ADAM2Vcf
Adam2Fastq
AlleleCount
CalculateDepth
CountContigKmers
CountReadKmers
Fasta2ADAM
Features2ADAM
FlagStat
Flatten
ListDict
PluginExecutor
PrintADAM
PrintGenes
PrintTags
Transform
Vcf2ADAM
VcfAnnotation2ADAM
View
WigFix2Bed
asSingleFile
TransformArgs
ViewArgs