Class

org.bdgenomics.cannoli

FreebayesArgs

Related Doc: package cannoli

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class FreebayesArgs extends Args4jBase

Freebayes function arguments.

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Args4jBase, AnyRef, Any
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Instance Constructors

  1. new FreebayesArgs()

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Value Members

  1. final def !=(arg0: Any): Boolean

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    AnyRef → Any

  2. final def ##(): Int

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  3. final def ==(arg0: Any): Boolean

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  4. var addFiles: Boolean

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  5. final def asInstanceOf[T0]: T0

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  6. def clone(): AnyRef

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    Attributes
    protected[java.lang]
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    @throws( ... )

  7. var doPrintUsage: Boolean

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    Definition Classes
    Args4jBase

  8. final def eq(arg0: AnyRef): Boolean

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  9. def equals(arg0: Any): Boolean

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  10. var executable: String

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  11. def finalize(): Unit

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    protected[java.lang]
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    AnyRef
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    @throws( classOf[java.lang.Throwable] )

  12. var freebayesArgs: String

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  13. final def getClass(): Class[_]

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  14. var gvcf: Boolean

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  15. var gvcfChunk: Int

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  16. def hashCode(): Int

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  17. var image: String

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  18. final def isInstanceOf[T0]: Boolean

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  19. final def ne(arg0: AnyRef): Boolean

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  20. final def notify(): Unit

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    AnyRef

  21. final def notifyAll(): Unit

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  22. var referencePath: String

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  23. var sudo: Boolean

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  24. final def synchronized[T0](arg0: ⇒ T0): T0

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  25. def toString(): String

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  26. var useDocker: Boolean

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  27. var useSingularity: Boolean

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  28. final def wait(): Unit

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    @throws( ... )

  29. final def wait(arg0: Long, arg1: Int): Unit

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  30. final def wait(arg0: Long): Unit

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Inherited from Args4jBase

Inherited from AnyRef

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