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–
deprecated
org
org.bdgenomics
org.bdgenomics.cannoli
(class)
BcftoolsCall
(class)
BcftoolsCallArgs
(class)
BcftoolsMpileup
(class)
BcftoolsMpileupArgs
(class)
BcftoolsNorm
(class)
BcftoolsNormArgs
(class)
BedtoolsIntersect
(class)
BedtoolsIntersectArgs
(class)
Blastn
(class)
BlastnArgs
(class)
Bowtie
(class)
Bowtie2
(class)
Bowtie2Args
(class)
BowtieArgs
(class)
BwaMem
(class)
BwaMem2
(class)
BwaMem2Args
(class)
BwaMemArgs
(object)
Cannoli
(class)
CannoliFn
(class)
Freebayes
(class)
FreebayesArgs
(class)
Gem
(class)
GemArgs
(class)
MagicBlast
(class)
MagicBlastArgs
(class)
Minimap2
(class)
Minimap2Args
(class)
SamtoolsMpileup
(class)
SamtoolsMpileupArgs
(class)
SingleEndBowtie2
(class)
SingleEndBowtie2Args
(class)
SingleEndStar
(class)
SingleEndStarArgs
(class)
Snap
(class)
SnapArgs
(class)
SnpEff
(class)
SnpEffArgs
(class)
Star
(class)
StarArgs
(class)
Vep
(class)
VepArgs
(class)
VtNormalize
(class)
VtNormalizeArgs