a
BedtoolsIntersectArgs
absolute
CannoliFn
addFiles
BcftoolsCallArgs
BcftoolsMpileupArgs
BcftoolsNormArgs
BedtoolsIntersectArgs
BlastnArgs
Bowtie2Args
BowtieArgs
BwaMem2Args
BwaMemArgs
FreebayesArgs
GemArgs
MagicBlastArgs
Minimap2Args
SamtoolsMpileupArgs
SingleEndBowtie2Args
SingleEndStarArgs
SnapArgs
StarArgs
VepArgs
VtNormalizeArgs
alignWithBlastn
CannoliSequenceDataset
alignWithBowtie
CannoliFragmentDataset
alignWithBowtie2
CannoliAlignmentDataset
CannoliFragmentDataset
CannoliReadDataset
alignWithBwaMem
CannoliFragmentDataset
alignWithBwaMem2
CannoliFragmentDataset
alignWithGem
CannoliFragmentDataset
alignWithMagicBlast
CannoliFragmentDataset
alignWithMinimap2
CannoliFragmentDataset
alignWithSnap
CannoliFragmentDataset
alignWithStar
CannoliAlignmentDataset
CannoliFragmentDataset
CannoliReadDataset
annotateWithSnpEff
CannoliVariantContextDataset
annotateWithVep
CannoliVariantContextDataset
apply
BcftoolsCall
BcftoolsMpileup
BcftoolsNorm
BedtoolsIntersect
Blastn
Bowtie
Bowtie2
BwaMem
BwaMem2
Freebayes
Gem
MagicBlast
Minimap2
SamtoolsMpileup
SingleEndBowtie2
SingleEndStar
Snap
SnpEff
Star
Vep
VtNormalize
args
BcftoolsCall
BcftoolsMpileup
BcftoolsNorm
BedtoolsIntersect
Blastn
Bowtie
Bowtie2
BwaMem
BwaMem2
Freebayes
Gem
MagicBlast
Minimap2
SamtoolsMpileup
SingleEndBowtie2
SingleEndStar
Snap
SnpEff
Star
Vep
VtNormalize
assembly
VepArgs