org.broadinstitute.hellbender.tools.walkers.contamination

Class ContaminationRecord

java.lang.Object

org.broadinstitute.hellbender.tools.walkers.contamination.ContaminationRecord

public class ContaminationRecord
extends java.lang.Object

Created by David Benjamin on 2/13/17.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	ContaminationRecord.Level

Constructor Summary

Constructors

Constructor and Description
ContaminationRecord(java.lang.String level, double contamination, double error)

Method Summary

Modifier and Type	Method and Description
double	getContamination()
double	getError()
java.lang.String	getLevel()
static java.util.List<ContaminationRecord>	readFromFile(java.io.File tableFile)
static void	writeToFile(java.util.List<ContaminationRecord> records, java.io.File outputTable)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ContaminationRecord

public ContaminationRecord(java.lang.String level,
                           double contamination,
                           double error)

Method Detail

getLevel

public java.lang.String getLevel()

getContamination

public double getContamination()

getError

public double getError()

writeToFile

public static void writeToFile(java.util.List<ContaminationRecord> records,
                               java.io.File outputTable)

readFromFile

public static java.util.List<ContaminationRecord> readFromFile(java.io.File tableFile)