Hierarchy For Package org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.apache.commons.math3.distribution.AbstractIntegerDistribution (implements org.apache.commons.math3.distribution.IntegerDistribution, java.io.Serializable)
    • org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup.BetaBinomialDistribution
  • org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup.AllelePileupCounter
  • org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup.BasicSomaticShortMutationValidator
  • org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup.BasicValidationResult (implements htsjdk.samtools.util.Locatable)
  • org.broadinstitute.hellbender.cmdline.CommandLineProgram (implements org.broadinstitute.barclay.argparser.CommandLinePluginProvider)
    • org.broadinstitute.hellbender.engine.GATKTool
      • org.broadinstitute.hellbender.engine.VariantWalkerBase
        • org.broadinstitute.hellbender.engine.VariantWalker
          • org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup.ValidateBasicSomaticShortMutations
  • org.broadinstitute.hellbender.tools.walkers.validation.basicshortmutpileup.PowerCalculationUtils