| Class | Description |
|---|---|
| CollectSequencingArtifactMetrics |
Quantify substitution errors caused by mismatched base pairings during various
stages of sample / library prep.
|
| ConvertSequencingArtifactToOxoG | |
| ErrorSummaryMetrics |
Summary metrics produced by
CollectSequencingArtifactMetrics as a roll up of the
context-specific error rates, to provide global error rates per type of base substitution. |
| SequencingArtifactMetrics | |
| SequencingArtifactMetrics.BaitBiasDetailMetrics |
Bait bias artifacts broken down by context.
|
| SequencingArtifactMetrics.BaitBiasSummaryMetrics |
Summary analysis of a single bait bias artifact, also known as a reference bias artifact.
|
| SequencingArtifactMetrics.PreAdapterDetailMetrics |
Pre-adapter artifacts broken down by context.
|
| SequencingArtifactMetrics.PreAdapterSummaryMetrics |
Summary analysis of a single pre-adapter artifact.
|
| Enum | Description |
|---|---|
| Transition |
Enum representation of a transition from one base to any other.
|
| Transition.Base |