org.broadinstitute.hellbender.utils.help

Class HelpConstants

java.lang.Object

org.broadinstitute.hellbender.utils.help.HelpConstants

public final class HelpConstants
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	DOC_CAT_ANNOTATORS Definition of the group names / descriptions for documentation/help purposes.
static java.lang.String	DOC_CAT_ANNOTATORS_SUMMARY
static java.lang.String	DOC_CAT_CNV
static java.lang.String	DOC_CAT_CNV_SUMMARY
static java.lang.String	DOC_CAT_COVERAGE_ANALYSIS
static java.lang.String	DOC_CAT_COVERAGE_ANALYSIS_SUMMARY
static java.lang.String	DOC_CAT_EXAMPLE
static java.lang.String	DOC_CAT_EXAMPLE_SUMMARY
static java.lang.String	DOC_CAT_METAGENOMICS
static java.lang.String	DOC_CAT_METAGENOMICS_SUMMARY
static java.lang.String	DOC_CAT_METHYLATION_DISCOVERY
static java.lang.String	DOC_CAT_METHYLATION_DISCOVERY_SUMMARY
static java.lang.String	DOC_CAT_READFILTERS
static java.lang.String	DOC_CAT_READFILTERS_SUMMARY
static java.lang.String	DOC_CAT_RNA
static java.lang.String	DOC_CAT_RNA_SUMMARY
static java.lang.String	DOC_CAT_SHORT_VARIANT_DISCOVERY
static java.lang.String	DOC_CAT_SHORT_VARIANT_DISCOVERY_SUMMARY
static java.lang.String	DOC_CAT_SV_DISCOVERY
static java.lang.String	DOC_CAT_SV_DISCOVERY_SUMMARY
static java.lang.String	DOC_CAT_TEST
static java.lang.String	DOC_CAT_TEST_SUMMARY
static java.lang.String	GATK_FORUM_URL
static java.lang.String	GATK_MAIN_SITE

Method Summary

Modifier and Type	Method and Description
static java.lang.String	forumPost(java.lang.String post)
static java.lang.String	getSuperCategoryProperty(java.lang.String groupName) Given a group name, return a supercategory string for use by the online doc system to determine which supercateogry the group is in.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

GATK_FORUM_URL

public static final java.lang.String GATK_FORUM_URL

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Constant Field Values

GATK_MAIN_SITE

public static final java.lang.String GATK_MAIN_SITE

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Constant Field Values

DOC_CAT_ANNOTATORS

public static final java.lang.String DOC_CAT_ANNOTATORS

Definition of the group names / descriptions for documentation/help purposes.

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Constant Field Values

DOC_CAT_ANNOTATORS_SUMMARY

public static final java.lang.String DOC_CAT_ANNOTATORS_SUMMARY

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Constant Field Values

DOC_CAT_COVERAGE_ANALYSIS

public static final java.lang.String DOC_CAT_COVERAGE_ANALYSIS

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Constant Field Values

DOC_CAT_COVERAGE_ANALYSIS_SUMMARY

public static final java.lang.String DOC_CAT_COVERAGE_ANALYSIS_SUMMARY

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Constant Field Values

DOC_CAT_CNV

public static final java.lang.String DOC_CAT_CNV

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Constant Field Values

DOC_CAT_CNV_SUMMARY

public static final java.lang.String DOC_CAT_CNV_SUMMARY

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Constant Field Values

DOC_CAT_EXAMPLE

public static final java.lang.String DOC_CAT_EXAMPLE

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Constant Field Values

DOC_CAT_EXAMPLE_SUMMARY

public static final java.lang.String DOC_CAT_EXAMPLE_SUMMARY

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Constant Field Values

DOC_CAT_METAGENOMICS

public static final java.lang.String DOC_CAT_METAGENOMICS

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Constant Field Values

DOC_CAT_METAGENOMICS_SUMMARY

public static final java.lang.String DOC_CAT_METAGENOMICS_SUMMARY

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Constant Field Values

DOC_CAT_READFILTERS

public static final java.lang.String DOC_CAT_READFILTERS

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Constant Field Values

DOC_CAT_READFILTERS_SUMMARY

public static final java.lang.String DOC_CAT_READFILTERS_SUMMARY

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Constant Field Values

DOC_CAT_SHORT_VARIANT_DISCOVERY

public static final java.lang.String DOC_CAT_SHORT_VARIANT_DISCOVERY

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Constant Field Values

DOC_CAT_SHORT_VARIANT_DISCOVERY_SUMMARY

public static final java.lang.String DOC_CAT_SHORT_VARIANT_DISCOVERY_SUMMARY

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Constant Field Values

DOC_CAT_SV_DISCOVERY

public static final java.lang.String DOC_CAT_SV_DISCOVERY

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Constant Field Values

DOC_CAT_SV_DISCOVERY_SUMMARY

public static final java.lang.String DOC_CAT_SV_DISCOVERY_SUMMARY

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Constant Field Values

DOC_CAT_TEST

public static final java.lang.String DOC_CAT_TEST

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Constant Field Values

DOC_CAT_TEST_SUMMARY

public static final java.lang.String DOC_CAT_TEST_SUMMARY

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Constant Field Values

DOC_CAT_RNA

public static final java.lang.String DOC_CAT_RNA

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Constant Field Values

DOC_CAT_RNA_SUMMARY

public static final java.lang.String DOC_CAT_RNA_SUMMARY

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Constant Field Values

DOC_CAT_METHYLATION_DISCOVERY

public static final java.lang.String DOC_CAT_METHYLATION_DISCOVERY

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Constant Field Values

DOC_CAT_METHYLATION_DISCOVERY_SUMMARY

public static final java.lang.String DOC_CAT_METHYLATION_DISCOVERY_SUMMARY

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Constant Field Values

Method Detail

forumPost

public static java.lang.String forumPost(java.lang.String post)

getSuperCategoryProperty

public static java.lang.String getSuperCategoryProperty(java.lang.String groupName)

Given a group name, return a supercategory string for use by the online doc system to determine which supercateogry the group is in. The strings returned by this method should match those used in the corresponding help template.

Parameters:

groupName -

Returns:

supercategory string corresponding to groupName for use in for use in determining which supercateogry the group is in for online doc purposes.