public class EvidenceTargetLinkClusterer
extends java.lang.Object
This class is responsible for iterating over a collection of BreakpointEvidence to find clusters of evidence with
distal targets (discordant read pairs or split reads) that agree in their location and target intervals and strands.
Paired intervals that agree are intersected with one another to produce what should be the smallest possible pair
of intervals that might hold the breakpoints. The evidence target links also keep track of the number of discordant
read pairs and split reads that went into their creation.