org.broadinstitute.hellbender.engine

Interface MultiIntervalShard<T>

Type Parameters:

T - Type of data in this shard

All Superinterfaces:

java.lang.Iterable<T>

All Known Implementing Classes:

MultiIntervalLocalReadShard, ShardToMultiIntervalShardAdapter

public interface MultiIntervalShard<T>
extends java.lang.Iterable<T>

An interface to represent shards of arbitrary data spanning multiple intervals.

Method Summary

Modifier and Type	Method and Description
java.util.List<SimpleInterval>	getIntervals()
java.util.List<SimpleInterval>	getPaddedIntervals()

Methods inherited from interface java.lang.Iterable

forEach, iterator, spliterator

Method Detail

getIntervals

java.util.List<SimpleInterval> getIntervals()

Returns:

A List of this shard's intervals

getPaddedIntervals

java.util.List<SimpleInterval> getPaddedIntervals()

Returns:

A List of this shard's intervals, with padding added to each interval on both sides