Hierarchy For Package org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.VariantStratifier (implements java.lang.Comparable<T>, org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.manager.Stratifier<T>)
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.AlleleCount
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.AlleleFrequency
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.CompFeatureInput (implements org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.RequiredStratification)
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.Contig
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.CpG
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.Degeneracy
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.EvalFeatureInput (implements org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.RequiredStratification)
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.Family
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.Filter
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.FilterType
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.FunctionalClass
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.IndelSize
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.IntervalStratification
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.JexlExpression (implements org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.StandardStratification)
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.Novelty (implements org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.StandardStratification)
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.OneBPIndel
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.Sample
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.SnpEffPositionModifier
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.TandemRepeat
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.VariantType

Interface Hierarchy

• org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.RequiredStratification
• org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.StandardStratification

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.FunctionalClass.FunctionalType
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.AlleleFrequency.StratifyingScale
    • org.broadinstitute.hellbender.tools.walkers.varianteval.stratifications.SnpEffPositionModifier.PositionModifier