org.broadinstitute.hellbender.utils.mcmc

Interface ParameterSampler<U,V extends java.lang.Enum<V> & ParameterEnum,S extends ParameterizedState<V>,T extends DataCollection>

Type Parameters:

U - type of parameter value to be sampled

V - type of enumerated parameters, see ParameterEnum

S - type of ParameterizedState

T - type of DataCollection

Functional Interface:

This is a functional interface and can therefore be used as the assignment target for a lambda expression or method reference.

@FunctionalInterface
public interface ParameterSampler<U,V extends java.lang.Enum<V> & ParameterEnum,S extends ParameterizedState<V>,T extends DataCollection>

Interface for generating random samples of a Parameter value, given an ParameterizedState and a DataCollection.

Method Summary

Modifier and Type	Method and Description
U	sample(org.apache.commons.math3.random.RandomGenerator rng, S state, T dataCollection) Returns a random sample of a value that is dependent on an ParameterizedState and a DataCollection.

Method Detail

sample

U sample(org.apache.commons.math3.random.RandomGenerator rng,
         S state,
         T dataCollection)

Returns a random sample of a value that is dependent on an ParameterizedState and a DataCollection.

Parameters:

rng - RandomGenerator to use in generating random sample

state - ParameterizedState to use in generating random sample

dataCollection - DataCollection to use in generating random sample

Returns:

random sample of value