| Class | Description |
|---|---|
| CopyNumberProgramGroup |
Tools that analyze read coverage to detect copy number variants
|
| CoverageAnalysisProgramGroup |
Tools that count coverage, e.g.
|
| ExampleProgramGroup |
Program group for Example programs
|
| MetagenomicsProgramGroup |
Tools that perform metagenomic analysis, e.g.
|
| MethylationProgramGroup |
Tools that performs methylation calling and methylation-based coverage for bisulfite BAMs
|
| ShortVariantDiscoveryProgramGroup |
Tools that perform variant calling and genotyping for short variants (SNPs, SNVs and Indels)
|
| StructuralVariantDiscoveryProgramGroup |
Tools that detect structural variants
|