org.broadinstitute.hellbender.utils

Enum SequenceDictionaryUtils.SequenceDictionaryCompatibility

java.lang.Object

java.lang.Enum<SequenceDictionaryUtils.SequenceDictionaryCompatibility>

org.broadinstitute.hellbender.utils.SequenceDictionaryUtils.SequenceDictionaryCompatibility

All Implemented Interfaces:

java.io.Serializable, java.lang.Comparable<SequenceDictionaryUtils.SequenceDictionaryCompatibility>

Enclosing class:

SequenceDictionaryUtils

public static enum SequenceDictionaryUtils.SequenceDictionaryCompatibility
extends java.lang.Enum<SequenceDictionaryUtils.SequenceDictionaryCompatibility>

Enum Constant Summary

Enum Constants

Enum Constant and Description
COMMON_SUBSET
DIFFERENT_INDICES
IDENTICAL
NO_COMMON_CONTIGS
NON_CANONICAL_HUMAN_ORDER
OUT_OF_ORDER
SUPERSET
UNEQUAL_COMMON_CONTIGS

Method Summary

Modifier and Type	Method and Description
static SequenceDictionaryUtils.SequenceDictionaryCompatibility	valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static SequenceDictionaryUtils.SequenceDictionaryCompatibility[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

IDENTICAL

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility IDENTICAL

COMMON_SUBSET

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility COMMON_SUBSET

SUPERSET

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility SUPERSET

NO_COMMON_CONTIGS

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility NO_COMMON_CONTIGS

UNEQUAL_COMMON_CONTIGS

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility UNEQUAL_COMMON_CONTIGS

NON_CANONICAL_HUMAN_ORDER

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility NON_CANONICAL_HUMAN_ORDER

OUT_OF_ORDER

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility OUT_OF_ORDER

DIFFERENT_INDICES

public static final SequenceDictionaryUtils.SequenceDictionaryCompatibility DIFFERENT_INDICES

Method Detail

values

public static SequenceDictionaryUtils.SequenceDictionaryCompatibility[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (SequenceDictionaryUtils.SequenceDictionaryCompatibility c : SequenceDictionaryUtils.SequenceDictionaryCompatibility.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static SequenceDictionaryUtils.SequenceDictionaryCompatibility valueOf(java.lang.String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

java.lang.IllegalArgumentException - if this enum type has no constant with the specified name

java.lang.NullPointerException - if the argument is null