org.broadinstitute.hellbender.utils

Class ZipUtils

java.lang.Object

org.broadinstitute.hellbender.utils.ZipUtils

public class ZipUtils
extends java.lang.Object

Utility class to zip and unzip files.

Constructor Summary

Constructors

Constructor and Description
ZipUtils()

Method Summary

Modifier and Type	Method and Description
static void	unzip(GATKPath path, java.io.File dest, java.lang.String... files) Unzips a file in a provided path into a destination directory.
static void	zip(java.io.File source, GATKPath dest, java.lang.String... files) Creates a zip file give a source file/directory to zip and the final destination zip file path.\

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ZipUtils

public ZipUtils()

Method Detail

unzip

public static void unzip(GATKPath path,
                         java.io.File dest,
                         java.lang.String... files)

Unzips a file in a provided path into a destination directory.

Parameters:

path - the location of the zip file to unzip.

dest - the destination directory.

files - files to unzip, by omission is the whole zip file content.

zip

public static void zip(java.io.File source,
                       GATKPath dest,
                       java.lang.String... files)

Creates a zip file give a source file/directory to zip and the final destination zip file path.\

Directories are zipped recursively.

Parameters:

source - the source folder or file.

dest - the destination path.

files - if not empty, this array indicate what files needs to be zipped. If zero length, all files will be zipped.