org.broadinstitute.hellbender.utils.activityprofile

Class ActivityProfileStateRange

java.lang.Object

org.broadinstitute.hellbender.utils.activityprofile.ActivityProfileStateRange

public class ActivityProfileStateRange
extends java.lang.Object

An efficient way of representing a set of ActivityProfileStates in an interval; used by Spark.

Constructor Summary

Constructors

Constructor and Description
ActivityProfileStateRange(MultiIntervalShard<?> shard, java.util.Iterator<ActivityProfileState> activityProfileStateIterator)

Method Summary

Modifier and Type	Method and Description
java.lang.String	getContig()
static java.util.Iterator<ActivityProfileState>	toIteratorActivityProfileState(java.util.Iterator<ActivityProfileStateRange> it)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ActivityProfileStateRange

public ActivityProfileStateRange(MultiIntervalShard<?> shard,
                                 java.util.Iterator<ActivityProfileState> activityProfileStateIterator)

Method Detail

getContig

public java.lang.String getContig()

toIteratorActivityProfileState

public static java.util.Iterator<ActivityProfileState> toIteratorActivityProfileState(java.util.Iterator<ActivityProfileStateRange> it)