Hierarchy For Package org.broadinstitute.hellbender.utils.io

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.broadinstitute.hellbender.utils.io.BlockCompressedIntervalStream
  • org.broadinstitute.hellbender.utils.io.BlockCompressedIntervalStream.IndexEntry
  • org.broadinstitute.hellbender.utils.io.BlockCompressedIntervalStream.Reader<T> (implements htsjdk.tribble.FeatureReader<T>)
  • org.broadinstitute.hellbender.utils.io.BlockCompressedIntervalStream.Writer<F> (implements org.broadinstitute.hellbender.utils.codecs.FeatureSink<F>)
  • org.broadinstitute.hellbender.utils.io.FeatureOutputStream<F> (implements org.broadinstitute.hellbender.utils.codecs.FeatureSink<F>)
  • org.broadinstitute.hellbender.utils.io.IOUtils
  • java.io.OutputStream (implements java.io.Closeable, java.io.Flushable)
    • org.apache.commons.io.output.ThresholdingOutputStream
      • org.broadinstitute.hellbender.utils.io.HardThresholdingOutputStream
  • org.broadinstitute.hellbender.utils.io.Resource

Interface Hierarchy

• org.broadinstitute.hellbender.utils.io.BlockCompressedIntervalStream.WriteFunc<F>